[Cdd-commits] r231 - in projects/med/trunk: docs menu/docs menu/docs/bio tasks

Andreas Tille debian-custom@lists.debian.org
Fri, 09 Jul 2004 08:51:19 -0600 

Author: tille
Date: Fri Jul  9 08:51:19 2004
New Revision: 231

Added:
   projects/med/trunk/menu/docs/
      - copied from r223, projects/med/trunk/docs/
   projects/med/trunk/menu/docs/bio/fastdnaml.html
Removed:
   projects/med/trunk/docs/
   projects/med/trunk/menu/docs/bio/fastdnaml.txt
Modified:
   projects/med/trunk/tasks/bio
   projects/med/trunk/tasks/bio-dev
   projects/med/trunk/tasks/cms
   projects/med/trunk/tasks/dent
   projects/med/trunk/tasks/imaging
   projects/med/trunk/tasks/imaging-dev
   projects/med/trunk/tasks/pharmacy
   projects/med/trunk/tasks/physics
   projects/med/trunk/tasks/tools
Log:
Removed Architecture from tasks (which is done automatically by new cdd-gen-control and added task name instead


Added: projects/med/trunk/menu/docs/bio/fastdnaml.html
==============================================================================
--- (empty file)
+++ projects/med/trunk/menu/docs/bio/fastdnaml.html	Fri Jul  9 08:51:19 2004
@@ -0,0 +1,44 @@
+<html>
+<head>
+<title>Construction of Phylogenetic Trees</title>
+<meta name="author" content="Andreas Tille" />
+</head>
+<body>
+<h2>FastDNAml: Construction of Phylogenetic Trees</h2>
+
+<h3>Some information about fastDNAml from the Debian-Med project.</h3>
+
+<h4>fastdnaml provides tools for construction of phylogenetic trees of DNA sequences</h4>
+
+<quote>
+ fastDNAml is a program derived from Joseph Felsenstein's version 3.3 DNAML
+ (part of his PHYLIP package).  Users should consult the documentation for
+ DNAML before using this program.
+ fastDNAml is an attempt to solve the same problem as DNAML, but to do so
+ faster and using less memory, so that larger trees and/or more bootstrap
+ replicates become tractable.  Much of fastDNAml is merely a recoding of the
+ PHYLIP 3.3 DNAML program from PASCAL to C.
+</quote>
+
+<h4>For more detailed information see</h4>
+
+<example>
+   man fastDNAml
+   man fastDNAml-util
+   view /usr/share/doc/fastdnaml/fastDNAml_doc_1.2.txt.gz
+</example>
+
+ or test the examples under
+
+<example>
+   /usr/share/doc/fastdnaml/examples
+</example>
+
+ using the Makefile provided under
+
+<example>
+   /usr/share/doc/fastdnaml/examples/tests
+</example>
+</body>
+</html>
+

Modified: projects/med/trunk/tasks/bio
==============================================================================
--- projects/med/trunk/tasks/bio	(original)
+++ projects/med/trunk/tasks/bio	Fri Jul  9 08:51:19 2004
@@ -1,4 +1,4 @@
-Architecture: all
+Task: Biology
 Description: Debian-Med micro-biology packages
  This meta package will install micro-biology related Debian packages
  for use in medical research.

Modified: projects/med/trunk/tasks/bio-dev
==============================================================================
--- projects/med/trunk/tasks/bio-dev	(original)
+++ projects/med/trunk/tasks/bio-dev	Fri Jul  9 08:51:19 2004
@@ -1,4 +1,4 @@
-Architecture: all
+Task: Biology Development
 Description: Debian-Med packages for development of micro-biology applications
  This meta package will install Debian packages which might be helpful
  for development of applications for micro-biological research.

Modified: projects/med/trunk/tasks/cms
==============================================================================
--- projects/med/trunk/tasks/cms	(original)
+++ projects/med/trunk/tasks/cms	Fri Jul  9 08:51:19 2004
@@ -1,4 +1,4 @@
-Architecture: all
+Task: Content Management
 Description: Debian-Med content management systems
  This meta package will install packages which are useful to build a
  content management system for medical care.

Modified: projects/med/trunk/tasks/dent
==============================================================================
--- projects/med/trunk/tasks/dent	(original)
+++ projects/med/trunk/tasks/dent	Fri Jul  9 08:51:19 2004
@@ -1,4 +1,4 @@
-Architecture: all
+Task: Dental
 Description: Debian-Med package for dental practice client
  This meta package will configure your system to act as client for the
  OdontoLinux server which provides a system for managing a dental practice.

Modified: projects/med/trunk/tasks/imaging
==============================================================================
--- projects/med/trunk/tasks/imaging	(original)
+++ projects/med/trunk/tasks/imaging	Fri Jul  9 08:51:19 2004
@@ -1,4 +1,4 @@
-Architecture: all
+Task: Imaging
 Description: Debian-Med imaging packages
  This meta package will install Debian packages which might be useful in medical
  image processing.

Modified: projects/med/trunk/tasks/imaging-dev
==============================================================================
--- projects/med/trunk/tasks/imaging-dev	(original)
+++ projects/med/trunk/tasks/imaging-dev	Fri Jul  9 08:51:19 2004
@@ -1,4 +1,4 @@
-Architecture: all
+Task: Imaging Development
 Description: Debian-Med packages for medical image development
  This meta package will install Debian packages which might be useful 
  for developing applications for medical image processing.

Modified: projects/med/trunk/tasks/pharmacy
==============================================================================
--- projects/med/trunk/tasks/pharmacy	(original)
+++ projects/med/trunk/tasks/pharmacy	Fri Jul  9 08:51:19 2004
@@ -1,4 +1,4 @@
-Architecture: all
+Task: Pharmacy
 Description: Debian-Med packages for pharmaceutical research
  This meta package contains dependencies for a
  collection of software and documentation which is useful for

Modified: projects/med/trunk/tasks/physics
==============================================================================
--- projects/med/trunk/tasks/physics	(original)
+++ projects/med/trunk/tasks/physics	Fri Jul  9 08:51:19 2004
@@ -1,4 +1,4 @@
-Architecture: all
+Task: Physics
 Description: Debian-Med packages for medical physicists
  This meta package contains dependencies for a
  collection of software and documentation which is useful for

Modified: projects/med/trunk/tasks/tools
==============================================================================
--- projects/med/trunk/tasks/tools	(original)
+++ projects/med/trunk/tasks/tools	Fri Jul  9 08:51:19 2004
@@ -1,4 +1,4 @@
-Architecture: all
+Task: Tools
 Description: Debian-Med several tools
  This meta package will install tools for several purposes in health care.
  Currently it just depends from mencal.