[Cdd-commits] r530 - projects/med/trunk/debian-med/tasks
CDD Subversion Commit
noreply at alioth.debian.org
Sat Feb 2 23:03:54 UTC 2008
Author: tille
Date: Sat Feb 2 23:03:53 2008
New Revision: 530
Modified:
projects/med/trunk/debian-med/tasks/bio
projects/med/trunk/debian-med/tasks/imaging
projects/med/trunk/debian-med/tasks/imaging-dev
projects/med/trunk/debian-med/tasks/physics
projects/med/trunk/debian-med/tasks/tools
Log:
Make tasks files compliant with rfc822 to be able to use python-debian tools successfully. That means basically to have exactly one Depends/Recommends/Suggest per paragraph so the fix was to insert some newlines.
Modified: projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio (original)
+++ projects/med/trunk/debian-med/tasks/bio Sat Feb 2 23:03:53 2008
@@ -5,18 +5,19 @@
that there also recommended and only suggested packages which are not
installed in any circumstance but only if the user asks for installing these.
-
Depends: fastdnaml, njplot, tree-puzzle | tree-ppuzzle, treeviewx
Why: Phylogenetic analysis.
+
Depends: molphy, phylip, treetool
Why: Phylogenetic analysis (Non-free, thus only suggested).
Depends: fastlink, loki, r-cran-qtl
-Why: Genetics.
+Why: Genetics
Depends: amap-align, blast2, boxshade, dialign, gff2aplot, emboss, hmmer, kalign, mummer, muscle, poa, probcons, proda, \
seaview, sim4, sibsim4, sigma-align, t-coffee, wise
Why: Sequence alignments and related programs.
+
Depends: arb, clustalw | clustalw-mpi, clustalx
Why: Sequence alignments and related programs (Non-free, thus only suggested).
@@ -32,11 +33,11 @@
Depends: biosquid, gff2ps, mipe, melting, ncbi-epcr, ncbi-tools-bin, ncbi-tools-x11, perlprimer, primer3, readseq, tigr-glimmer
Why: Tools for the molecular biologist.
-Recommends: mozilla-biofox
-Why: Tools for the molecular biologist.
+Suggests: mozilla-biofox
+Why: Tools for the molecular biologist. Because of the dependency from firefox we only suggest this package to not bloat the system of the user.
-Recommends: bugsx
-Why: Other packages
+Suggests: bugsx
+Why: Other packages (Non-free, thus only suggested).
Depends: dialign-t
@@ -92,10 +93,8 @@
Depends: ballview
Homepage: http://www.ballview.org
-Responsible: Andreas Moll <anmoll at gmx.de>
-License: LGPL
-WNPP: 407665
Pkg-URL: http://mentors.debian.net/debian/pool/main/b/ballview/
+License: LGPL
Pkg-Description: free molecular modeling and molecular graphics tool
BALLView provides fast OpenGL-based visualization of molecular structures,
molecular mechanics methods (minimization, MD simulation using the
Modified: projects/med/trunk/debian-med/tasks/imaging
==============================================================================
--- projects/med/trunk/debian-med/tasks/imaging (original)
+++ projects/med/trunk/debian-med/tasks/imaging Sat Feb 2 23:03:53 2008
@@ -6,12 +6,15 @@
installed in any circumstance but only if the user asks for installing these.
Depends: amide, ctsim, ctn, dicomnifti, imagej, minc-tools, medcon, python-nifti, xmedcon, dcmtk
+
Recommends: pngquant
+
Suggests: imagemagick, paul
Depends: libfslio0, libniftiio1, nifti-bin, dicomnifti, libvolpack1
Depends: aeskulap
+
Depends: fslview, fsl
Depends: bioimagesuite
Modified: projects/med/trunk/debian-med/tasks/imaging-dev
==============================================================================
--- projects/med/trunk/debian-med/tasks/imaging-dev (original)
+++ projects/med/trunk/debian-med/tasks/imaging-dev Sat Feb 2 23:03:53 2008
@@ -10,6 +10,7 @@
Depends: libfslio0-dev, libniftiio1-dev
Depends: libinsighttoolkit-dev
+
Suggests: insighttoolkit-examples
Suggests: libgtkimreg-dev, libnifti-doc
Modified: projects/med/trunk/debian-med/tasks/physics
==============================================================================
--- projects/med/trunk/debian-med/tasks/physics (original)
+++ projects/med/trunk/debian-med/tasks/physics Sat Feb 2 23:03:53 2008
@@ -9,14 +9,16 @@
these.
Depends: paw++
-Why: Just depend from the user friendly version because it is easier to \
+Why: Just depend from the user friendly version because it is easier to
povide a menu item
+
Recommends: paw
Why: This is for the purists with exactly the same functionality as paw++
+
Suggests: paw-demos
Depends: octave | octave2.1,
-Why: "r-base" ist ein Metapaket, und es ist besser da ne Defaultalternative \
- zu haben. Dirk Eddelbuettel <edd at debian.org>
Depends: r-base | r-base-core
+Why: "r-base" is a meta package and it is better to have a default
+ alternative -- Dirk Eddelbuettel <edd at debian.org>
Modified: projects/med/trunk/debian-med/tasks/tools
==============================================================================
--- projects/med/trunk/debian-med/tasks/tools (original)
+++ projects/med/trunk/debian-med/tasks/tools Sat Feb 2 23:03:53 2008
@@ -10,7 +10,6 @@
Suggests: cl-pubmed
Why: Strong dependency would cost installing a large amount of Common Lisp tools which in most cases is not worth the effort
-
Why: Netepi should go into med-research, but this section has not yet an existing package
Depends: netepi-analysis
Homepage: http://www.netepi.org/
@@ -71,4 +70,3 @@
Ageing.
.
The software was developed by New South Wales Department of Health.
-
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