[Cdd-commits] r612 - projects/med/trunk/debian-med/tasks

[CDD Subversion Commit]

Author: tille
Date: Fri Mar 14 07:48:48 2008
New Revision: 612

Modified:
   projects/med/trunk/debian-med/tasks/bio
Log:
Added phylowin


Modified: projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio	(original)
+++ projects/med/trunk/debian-med/tasks/bio	Fri Mar 14 07:48:48 2008
@@ -774,3 +774,22 @@
  PhyloGrapher and tcl_blast_parser are useful tools to analyse BLAST
  biological sequence alignment reports (BLAST is provided by Debian's
  blast2 package).
+
+Depends: phylowin
+Homepage: http://pbil.univ-lyon1.fr/software/phylowin.html
+Responsible: Charles Plessy <charles-debian-nospam at plessy.org>
+WNPP: 395840
+License: unknown
+Pkg-Description: Graphical interface for molecular phylogenetic inference
+ Phylo_win is a graphical colour interface for molecular phylogenetic
+ inference. It performs neighbor-joining, parsimony and maximum
+ likelihood methods and bootstrap with any of them. Many distances can be
+ used including Jukes & Cantor, Kimura, Tajima & Nei, HKY, Galtier & Gouy
+ (1995), LogDet for nucleotidic sequences, Poisson correction for protein
+ sequences, Ka and Ks for codon sequences. Species and sites to include
+ in the analysis are selected by mouse. Reconstructed trees can be drawn,
+ edited, printed, stored and evaluated according to numerous criteria.
+ .
+ This program uses sources files from the Phylip program, which forbids
+ its use for profit.  Therfore, Phylo_win will unfortunately have to be
+ distributed in contrib or non-free.