[Cdd-commits] r742 - projects/med/trunk/debian-med/tasks

[CDD Subversion Commit]

Author: plessy
Date: Sat May 10 14:37:05 2008
New Revision: 742

Modified:
   projects/med/trunk/debian-med/tasks/bio
Log:
Added back mirbase

Modified: projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio	(original)
+++ projects/med/trunk/debian-med/tasks/bio	Sat May 10 14:37:05 2008
@@ -1413,3 +1413,26 @@
 Note: The web site says GPL-3, but the tar archive contains a copy of
  the GPL-2. It also contain a PDF manual whose sources are missing.
  The final package would depend on zlib.
+
+Depends: mirbase
+Homepage: http://microrna.sanger.ac.uk/
+License: Public Domain
+WNPP: 420938
+Responsible: Charles Plessy <charles-debian-nospam at plessy.org>
+Pkg-Description: The microRNA sequence database
+ The miRBase Sequence Database provides a searchable repository
+ for published microRNA sequences and associated annotation,
+ functionality previously provided by the microRNA Registry.  miRBase
+ also contains predicted miRNA target genes in miRBase Targets, and
+ provides a gene naming and nomenclature function in the miRBase
+ Registry.
+ .
+ Release 9.1 of the database contains 4449 entries representing hairpin
+ precursor miRNAs, expressing 4274 mature miRNA products, in primates,
+ rodents, birds, fish, worms, flies, plants and viruses.
+ .
+ This package will install the miRBase database for mySQL, EMBOSS, and/or
+ ncbi-blast if you have the corresponding packages installed.
+ .
+ It is possible that mirbase will not be a package from the main archive, but
+ will be autogenerated as part of a larger data packaging effort.