[Cdd-commits] r1054 - projects/med/trunk/debian-med/tasks
CDD Subversion Commit
noreply at alioth.debian.org
Fri Sep 5 10:00:39 UTC 2008
Author: tille
Date: Fri Sep 5 10:00:39 2008
New Revision: 1054
Modified:
projects/med/trunk/debian-med/tasks/bio
projects/med/trunk/debian-med/tasks/bio-dev
Log:
More BioLinux links
Modified: projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio (original)
+++ projects/med/trunk/debian-med/tasks/bio Fri Sep 5 10:00:39 2008
@@ -1602,6 +1602,8 @@
Depends: artemis
Homepage: http://www.sanger.ac.uk/Software/Artemis/
License: GPL 2+
+Responsible: BioLinux <helpdesk at nebc.nox.ac.uk>
+Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
Pkg-Description: genome viewer and annotation tool
Artemis is a free genome viewer and annotation tool that allows visualization
of sequence features and the results of analyses within the context of the
@@ -1609,6 +1611,9 @@
available for UNIX, Macintosh and Windows systems. It can read EMBL and GENBANK
database entries or sequence in FASTA or raw format. Extra sequence features
can be in EMBL, GENBANK or GFF format.
+ .
+ This package is include into BioLinux distribution
+ http://envgen.nox.ac.uk/biolinux.html
Depends: maq
Homepage: http://maq.sourceforge.net/
@@ -1715,7 +1720,7 @@
Depends: act
Homepage: http://www.sanger.ac.uk/Software/ACT/
License: GPL
-Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/bio-linux-act_7.0-1_i386.deb
+Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
Responsible: BioLinux <helpdesk at nebc.nox.ac.uk>
Pkg-Description: DNA Sequence Comparison Viewer
ACT (Artemis Comparison Tool) is a DNA sequence comparison viewer
@@ -1731,6 +1736,9 @@
.
To see ACT in action go to the examples page
http://www.sanger.ac.uk/Software/ACT/Examples/
+ .
+ This package is included into BioLinux distribution
+ http://envgen.nox.ac.uk/biolinux.html
Depends: acedb
Homepage: http://www.acedb.org/
@@ -1956,9 +1964,12 @@
Homepage: http://ape.mpl.ird.fr/
License: GPL
Responsible: BioLinux <helpdesk at nebc.nox.ac.uk>
-Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/bio-linux-ape_1.2-3-2_i386.deb
+Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
Pkg-Description: Analyses of Phylogenetics and Evolution
APE (Analyses of Phylogenetics and Evolution) is a package written in R.
APE aims to be both a computing tool to analyse phylogenetic and
evolutionary data, and an environment to develop and implement new
analytical methods.
+ .
+ This package is include into BioLinux distribution
+ http://envgen.nox.ac.uk/biolinux.html
Modified: projects/med/trunk/debian-med/tasks/bio-dev
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio-dev (original)
+++ projects/med/trunk/debian-med/tasks/bio-dev Fri Sep 5 10:00:39 2008
@@ -134,6 +134,10 @@
sequences, file parsers, DAS client and server support, access to BioSQL
and Ensembl databases, and powerful analysis and statistical routines
including a dynamic programming toolkit.
+ .
+ The BioLinux distribution http://envgen.nox.ac.uk/biolinux.html
+ also features a biojava package at
+ http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
Depends: limma
Homepage: http://bioinf.wehi.edu.au/limma
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