[Cdd-commits] r1082 - projects/med/trunk/debian-med/tasks

[CDD Subversion Commit]

Author: tille
Date: Fri Sep 12 07:34:42 2008
New Revision: 1082

Modified:
   projects/med/trunk/debian-med/tasks/bio
Log:
Added paml


Modified: projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio	(original)
+++ projects/med/trunk/debian-med/tasks/bio	Fri Sep 12 07:34:42 2008
@@ -2642,3 +2642,22 @@
  .
  This package is included into BioLinux distribution
  http://envgen.nox.ac.uk/biolinux.html
+
+Depends: paml
+Homepage: http://abacus.gene.ucl.ac.uk/software/paml.html
+License: not specified
+Responsible: BioLinux - Stewart Houten <shou at ceh.ac.uk>
+Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
+Pkg-Description: Phylogenetic Analysis by Maximum Likelihood
+
+ PAML is a package of programs for phylogenetic analyses of DNA or
+ protein sequences using maximum likelihood. It is maintained and
+ distributed for academic use free of charge by Ziheng Yang. ANSI C
+ source codes are distributed for UNIX/Linux/Mac OSX, and executables
+ are provided for MS Windows. PAML is not good for tree making. It may
+ be used to estimate parameters and test hypotheses to study the
+ evolutionary process, when you have reconstructed trees using other
+ programs such as PAUP*, PHYLIP, MOLPHY, PhyML, RaxML, etc. 
+ .
+ This package is included into BioLinux distribution
+ http://envgen.nox.ac.uk/biolinux.html