[Cdd-commits] r1089 - projects/med/trunk/debian-med/tasks

[CDD Subversion Commit]

Author: tille
Date: Mon Sep 15 11:35:13 2008
New Revision: 1089

Modified:
   projects/med/trunk/debian-med/tasks/bio
Log:
added prot4est


Modified: projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio	(original)
+++ projects/med/trunk/debian-med/tasks/bio	Mon Sep 15 11:35:13 2008
@@ -2739,3 +2739,23 @@
  .
  This package is included into BioLinux distribution
  http://envgen.nox.ac.uk/biolinux.html
+
+Comment: BioLinux contains a priam package which is available at
+ http://bioinfo.genotoul.fr/priam/REL_JUL06/index_jul06.html but this
+ project has only a "free as in beer" binary download - so this is not
+ for us ...
+
+Depends: prot4est
+Homepage:
+http://xyala.cap.ed.ac.uk/bioinformatics/prot4EST/index.shtml
+License: GPL
+Responsible: BioLinux - Bela Tiwari <btiwari at ceh.ac.uk>
+Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
+Pkg-Description: EST protein translation suite 
+ prot4EST is a perl script that takes expressed sequence tags (ESTs)
+ and translates them optimally to produce putative peptides. prot4EST
+ intergrates a number of programs to overcome problems inherent with
+ translating ESTs.
+ .
+ This package is included into BioLinux distribution
+ http://envgen.nox.ac.uk/biolinux.html