[Collab-qa-commits] r2241 - in packages-metadata: a e g r

[Charles Plessy]

Author: plessy
Date: 2012-04-25 03:00:30 +0000 (Wed, 25 Apr 2012)
New Revision: 2241

Added:
   packages-metadata/a/abacas.upstream
Modified:
   packages-metadata/a/acedb.upstream
   packages-metadata/e/epcr.copyright
   packages-metadata/g/gnome-chemistry-utils.copyright
   packages-metadata/r/rasmol.upstream
Log:
Daily automatic umegaya push

Added: packages-metadata/a/abacas.upstream
===================================================================
--- packages-metadata/a/abacas.upstream	                        (rev 0)
+++ packages-metadata/a/abacas.upstream	2012-04-25 03:00:30 UTC (rev 2241)
@@ -0,0 +1,12 @@
+Reference:
+  Author: Samuel Assefa and Thomas M. Keane and Thomas D. Otto and Chris Newbold and Matthew Berriman
+  Title: "ABACAS: algorithm-based automatic contiguation of assembled sequences"
+  Journal: Bioinformatics
+  Year: 2009
+  Volume: 25
+  Number: 15
+  Pages: 1968-1969
+  DOI: 10.1093/bioinformatics/btp347
+  PMID: 19497936
+  URL: http://bioinformatics.oxfordjournals.org/content/25/15/1968
+  eprint: http://bioinformatics.oxfordjournals.org/content/25/15/1968.full.pdf+html

Modified: packages-metadata/a/acedb.upstream
===================================================================
--- packages-metadata/a/acedb.upstream	2012-04-24 03:00:30 UTC (rev 2240)
+++ packages-metadata/a/acedb.upstream	2012-04-25 03:00:30 UTC (rev 2241)
@@ -1,10 +1,25 @@
 Homepage: http://www.acedb.org/
 Name: dotter
 Reference:
- Author: E.L.L. Sonnhammer, R. Durbin
- Title: A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis.
- Journal: Gene
- Volume: 167
- Number: 2
- Pages: GC1-10
- Year: 1995
+ - Debian-Package: acedb-other-dotter
+   Author: E.L.L. Sonnhammer and R. Durbin
+   Title: A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis.
+   Journal: Gene
+   Volume: 167
+   Number: 2
+   Pages: GC1-10
+   Year: 1995
+   PMID: 8566757
+   ISSN: 03781119
+   DOI: 10.1016/0378-1119(95)00714-8
+   URL: http://www.mendeley.com/research/dotmatrix-program-dynamic-threshold-control-suited-genomic-dna-protein-sequence-analysis-2/
+ - Author: L. D. Stein and J. Thierry-Mieg
+   Title: "AceDB: a genome database management system"
+   Journal: Computing in Science and Engineering
+   Year: 1999
+   Volume: 1
+   Number: 3
+   Pages: 44-52
+   DOI: 10.1109/5992.764215
+   URL: http://ieeexplore.ieee.org/xpl/articleDetails.jsp?arnumber=764215
+   ISSN: 1521-9615

Modified: packages-metadata/e/epcr.copyright
===================================================================
--- packages-metadata/e/epcr.copyright	2012-04-24 03:00:30 UTC (rev 2240)
+++ packages-metadata/e/epcr.copyright	2012-04-25 03:00:30 UTC (rev 2241)
@@ -1,4 +1,6 @@
 Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: e-PCR
+Upstream-Contact: Kirill Rotmistrovsky <rotmistr at ncbi.nlm.nih.gov>
 Source: ftp://ftp.ncbi.nlm.nih.gov/pub/schuler/e-PCR/e-PCR-2.3.12-src.tar.gz
 
 Files: *

Modified: packages-metadata/g/gnome-chemistry-utils.copyright
===================================================================
--- packages-metadata/g/gnome-chemistry-utils.copyright	2012-04-24 03:00:30 UTC (rev 2240)
+++ packages-metadata/g/gnome-chemistry-utils.copyright	2012-04-25 03:00:30 UTC (rev 2241)
@@ -12,7 +12,7 @@
 
 Copyright:
 
-    Copyright (C) 1999-2010 Jean Bréfort <jean.brefort at ac-dijon.fr>
+    Copyright (C) 1999-2011 Jean Bréfort <jean.brefort at ac-dijon.fr>
     
     Partial copyright goes to:
 

Modified: packages-metadata/r/rasmol.upstream
===================================================================
--- packages-metadata/r/rasmol.upstream	2012-04-24 03:00:30 UTC (rev 2240)
+++ packages-metadata/r/rasmol.upstream	2012-04-25 03:00:30 UTC (rev 2241)
@@ -1,7 +1,7 @@
 Contact: Herbert J. Bernstein <yaya at bernstein-plus-sons.com>
 Name: RasMol
 Reference:
- author: Roger Sayle and E. James Milner-White
+ author: Roger A. Sayle and E. James Milner-White
  title: "RasMol: Biomolecular graphics for all"
  journal: Trends in Biochemical Sciences (TIBS)
  volume: 20
@@ -10,3 +10,4 @@
  year: 1995
  DOI: 10.1016/S0968-0004(00)89080-5
  PMID: 7482707
+ URL: http://www.sciencedirect.com/science/article/pii/S0968000400890805