[Collab-qa-commits] r2301 - in packages-metadata: a b c e f g h j k l m n o p r s t
Charles Plessy
plessy at alioth.debian.org
Thu May 10 03:00:36 UTC 2012
Author: plessy
Date: 2012-05-10 03:00:36 +0000 (Thu, 10 May 2012)
New Revision: 2301
Added:
packages-metadata/b/biomaj-watcher.copyright
packages-metadata/c/clusterssh.copyright
packages-metadata/c/conky-all.copyright
packages-metadata/c/conky.copyright
packages-metadata/e/edfbrowser.upstream
packages-metadata/f/font-manager.copyright
packages-metadata/g/ganeti-instance-debootstrap.copyright
packages-metadata/g/gitstats.copyright
packages-metadata/h/html5lib.copyright
packages-metadata/j/jxgrabkey.copyright
packages-metadata/k/khronos-opencl-headers.copyright
packages-metadata/m/mobyle.upstream
packages-metadata/m/mp3diags.copyright
packages-metadata/m/mpfr4.copyright
packages-metadata/n/nvidia-graphics-drivers.copyright
packages-metadata/n/nvidia-settings.copyright
packages-metadata/n/nvidia-xconfig.copyright
packages-metadata/o/oval-interpreter.copyright
packages-metadata/p/pyicqt.copyright
packages-metadata/p/pyquery.copyright
packages-metadata/p/python-jsonrpc2.copyright
packages-metadata/p/python-oauth2.copyright
packages-metadata/p/python-translationstring.copyright
packages-metadata/p/python-venusian.copyright
packages-metadata/r/ruby-dataobjects-mysql.copyright
packages-metadata/t/tex-common.copyright
packages-metadata/t/tora.copyright
Modified:
packages-metadata/a/acedb.upstream
packages-metadata/a/autodock-vina.upstream
packages-metadata/b/biojava-live.upstream
packages-metadata/b/biosig4c++.upstream
packages-metadata/b/bowtie2.copyright
packages-metadata/c/clonalframe.upstream
packages-metadata/c/clustalw.upstream
packages-metadata/c/cufflinks.copyright
packages-metadata/c/cufflinks.upstream
packages-metadata/l/libsbml.upstream
packages-metadata/m/mira.upstream
packages-metadata/m/mopac7.upstream
packages-metadata/p/pcb.copyright
packages-metadata/p/phy-spread.upstream
packages-metadata/p/primer3.upstream
packages-metadata/p/probalign.upstream
packages-metadata/r/r-cran-epi.upstream
packages-metadata/s/samtools.upstream
packages-metadata/s/seaview.upstream
packages-metadata/t/tm-align.upstream
Log:
Daily automatic umegaya push
Modified: packages-metadata/a/acedb.upstream
===================================================================
--- packages-metadata/a/acedb.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/a/acedb.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -2,8 +2,8 @@
Name: dotter
Reference:
- Debian-Package: acedb-other-dotter
- Author: E.L.L. Sonnhammer and R. Durbin
- Title: A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis.
+ Author: E. L. Sonnhammer and R. Durbin
+ Title: A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis
Journal: Gene
Volume: 167
Number: 2
Modified: packages-metadata/a/autodock-vina.upstream
===================================================================
--- packages-metadata/a/autodock-vina.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/a/autodock-vina.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -1,9 +1,8 @@
Contact: Oleg Trott <ot14 at columbia.edu>
-Reference-DOI: 10.1002/jcc.21334
Homepage: http://vina.scripps.edu
Name: AutoDock Vina
Reference:
- author: Oleg Trott, Arthur J. Olson
+ author: Oleg Trott and Arthur J. Olson
title: >
AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading
journal: Journal of Computational Chemistry
@@ -11,5 +10,6 @@
number: 2
pages: 455-461
year: 2010
+ DOI: 10.1002/jcc.21334
URL: http://onlinelibrary.wiley.com/doi/10.1002/jcc.21334/abstract
eprint: http://onlinelibrary.wiley.com/doi/10.1002/jcc.21334/full
Modified: packages-metadata/b/biojava-live.upstream
===================================================================
--- packages-metadata/b/biojava-live.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/b/biojava-live.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -7,6 +7,6 @@
Pages: 2096-2097
Year: 2008
URL: http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btn397
- Pubmed: 18689808
+ PMID: 18689808
DOI: 10.1093/bioinformatics/btn397
eprint: http://bioinformatics.oxfordjournals.org/content/24/18/2096.full.pdf+html
Added: packages-metadata/b/biomaj-watcher.copyright
===================================================================
--- packages-metadata/b/biomaj-watcher.copyright (rev 0)
+++ packages-metadata/b/biomaj-watcher.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,980 @@
+Format: http://anonscm.debian.org/viewvc/dep/web/deps/dep5.mdwn?revision=174
+Upstream-Name: biomaj-watcher
+Source: http://biomaj.genouest.org
+
+Files: debian/*
+Copyright: 2011 Olivier Sallou <olivier.sallou at irisa.fr>
+License: GPL-3
+ On Debian systems, the full text of the GNU General Public
+ License version 3 can be found in the file
+ `/usr/share/common-licenses/GPL-3'
+
+
+Files: *
+Copyright: 2011 GenOuest Platform <support at genouest.org>
+License: CeCILL
+ CeCILL FREE SOFTWARE LICENSE AGREEMENT
+ .
+ Notice
+ .
+ This Agreement is a Free Software license agreement that is the result
+ of discussions between its authors in order to ensure compliance with
+ the two main principles guiding its drafting:
+ .
+ * firstly, compliance with the principles governing the distribution
+ of Free Software: access to source code, broad rights granted to
+ users,
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+ it is conformant, both as regards the law of torts and
+ intellectual property law, and the protection that it offers to
+ both authors and holders of the economic rights over software.
+ .
+ The authors of the CeCILL (for Ce[a] C[nrs] I[nria] L[ogiciel] L[ibre])
+ license are:
+ .
+ Commissariat à l'Energie Atomique - CEA, a public scientific, technical
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+ endeavor to seek an amicable solution to any disagreements or disputes
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+ .
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+ occurrence, and unless emergency proceedings are necessary, the
+ disagreements or disputes shall be referred to the Paris Courts having
+ jurisdiction, by the more diligent Party.
+ .
+ Version 2.0 dated 2006-09-05.
+
+Files: usr/share/biomaj-watcher/src/war/images/appointment-new.png usr/share/biomaj-watcher/src/war/images/bookmark_add.png usr/share/biomaj-watcher/src/war/images/document-properties.png usr/share/biomaj-watcher/src/war/images/document-properties_Disabled.png usr/share/biomaj-watcher/src/war/images/edit-delete.png usr/share/biomaj-watcher/src/war/images/edit-delete_Disabled.png usr/share/biomaj-watcher/src/war/images/normal-update.png usr/share/biomaj-watcher/src/war/images/rebuild-bank.png usr/share/biomaj-watcher/src/war/images/update-from-scratch.png usr/share/biomaj-watcher/src/war/images/update-new.png
+Copyright: 2006-2007 Everaldo Coelho
+License: LGPL-2.1
+ On Debian systems, the full text of the license
+ can be found in the file
+ `/usr/share/common-licenses/LGPL-2.1'
+
+Files: usr/share/biomaj-watcher/src/war/images/arrow-refresh.png usr/share/biomaj-watcher/src/war/images/clock-go.png usr/share/biomaj-watcher/src/war/images/clock-go_Disabled.png usr/share/biomaj-watcher/src/war/images/group-add.png usr/share/biomaj-watcher/src/war/images/group-go.png usr/share/biomaj-watcher/src/war/images/lock-edit.png usr/share/biomaj-watcher/src/war/images/private.png usr/share/biomaj-watcher/src/war/images/public.png usr/share/biomaj-watcher/src/war/images/page-edit.png usr/share/biomaj-watcher/src/war/images/sched.png usr/share/biomaj-watcher/src/war/images/user-add.png usr/share/biomaj-watcher/src/war/images/user-edit.png
+Copyright: 2006 Mark James <mjames at gmail.com>
+License: CC-BY-3.0
+ THE WORK (AS DEFINED BELOW) IS PROVIDED UNDER THE TERMS OF THIS CREATIVE COMMONS PUBLIC LICENSE ("CCPL" OR "LICENSE"). THE WORK IS PROTECTED BY COPYRIGHT AND/OR OTHER APPLICABLE LAW. ANY USE OF THE WORK OTHER THAN AS AUTHORIZED UNDER THIS LICENSE OR COPYRIGHT LAW IS PROHIBITED.
+ .
+ BY EXERCISING ANY RIGHTS TO THE WORK PROVIDED HERE, YOU ACCEPT AND AGREE TO BE BOUND BY THE TERMS OF THIS LICENSE. TO THE EXTENT THIS LICENSE MAY BE CONSIDERED TO BE A CONTRACT, THE LICENSOR GRANTS YOU THE RIGHTS CONTAINED HERE IN CONSIDERATION OF YOUR ACCEPTANCE OF SUCH TERMS AND CONDITIONS.
+ .
+ 1. Definitions
+ .
+ "Adaptation" means a work based upon the Work, or upon the Work and other pre-existing works, such as a translation, adaptation, derivative work, arrangement of music or other alterations of a literary or artistic work, or phonogram or performance and includes cinematographic adaptations or any other form in which the Work may be recast, transformed, or adapted including in any form recognizably derived from the original, except that a work that constitutes a Collection will not be considered an Adaptation for the purpose of this License. For the avoidance of doubt, where the Work is a musical work, performance or phonogram, the synchronization of the Work in timed-relation with a moving image ("synching") will be considered an Adaptation for the purpose of this License.
+ "Collection" means a collection of literary or artistic works, such as encyclopedias and anthologies, or performances, phonograms or broadcasts, or other works or subject matter other than works listed in Section 1(f) below, which, by reason of the selection and arrangement of their contents, constitute intellectual creations, in which the Work is included in its entirety in unmodified form along with one or more other contributions, each constituting separate and independent works in themselves, which together are assembled into a collective whole. A work that constitutes a Collection will not be considered an Adaptation (as defined above) for the purposes of this License.
+ "Distribute" means to make available to the public the original and copies of the Work or Adaptation, as appropriate, through sale or other transfer of ownership.
+ "Licensor" means the individual, individuals, entity or entities that offer(s) the Work under the terms of this License.
+ "Original Author" means, in the case of a literary or artistic work, the individual, individuals, entity or entities who created the Work or if no individual or entity can be identified, the publisher; and in addition (i) in the case of a performance the actors, singers, musicians, dancers, and other persons who act, sing, deliver, declaim, play in, interpret or otherwise perform literary or artistic works or expressions of folklore; (ii) in the case of a phonogram the producer being the person or legal entity who first fixes the sounds of a performance or other sounds; and, (iii) in the case of broadcasts, the organization that transmits the broadcast.
+ "Work" means the literary and/or artistic work offered under the terms of this License including without limitation any production in the literary, scientific and artistic domain, whatever may be the mode or form of its expression including digital form, such as a book, pamphlet and other writing; a lecture, address, sermon or other work of the same nature; a dramatic or dramatico-musical work; a choreographic work or entertainment in dumb show; a musical composition with or without words; a cinematographic work to which are assimilated works expressed by a process analogous to cinematography; a work of drawing, painting, architecture, sculpture, engraving or lithography; a photographic work to which are assimilated works expressed by a process analogous to photography; a work of applied art; an illustration, map, plan, sketch or three-dimensional work relative to geography, topography, architecture or science; a performance; a broadcast; a phonogram; a compilation of data to the extent it is protected as a copyrightable work; or a work performed by a variety or circus performer to the extent it is not otherwise considered a literary or artistic work.
+ "You" means an individual or entity exercising rights under this License who has not previously violated the terms of this License with respect to the Work, or who has received express permission from the Licensor to exercise rights under this License despite a previous violation.
+ "Publicly Perform" means to perform public recitations of the Work and to communicate to the public those public recitations, by any means or process, including by wire or wireless means or public digital performances; to make available to the public Works in such a way that members of the public may access these Works from a place and at a place individually chosen by them; to perform the Work to the public by any means or process and the communication to the public of the performances of the Work, including by public digital performance; to broadcast and rebroadcast the Work by any means including signs, sounds or images.
+ "Reproduce" means to make copies of the Work by any means including without limitation by sound or visual recordings and the right of fixation and reproducing fixations of the Work, including storage of a protected performance or phonogram in digital form or other electronic medium.
+ 2. Fair Dealing Rights. Nothing in this License is intended to reduce, limit, or restrict any uses free from copyright or rights arising from limitations or exceptions that are provided for in connection with the copyright protection under copyright law or other applicable laws.
+ .
+ 3. License Grant. Subject to the terms and conditions of this License, Licensor hereby grants You a worldwide, royalty-free, non-exclusive, perpetual (for the duration of the applicable copyright) license to exercise the rights in the Work as stated below:
+ .
+ to Reproduce the Work, to incorporate the Work into one or more Collections, and to Reproduce the Work as incorporated in the Collections;
+ to create and Reproduce Adaptations provided that any such Adaptation, including any translation in any medium, takes reasonable steps to clearly label, demarcate or otherwise identify that changes were made to the original Work. For example, a translation could be marked "The original work was translated from English to Spanish," or a modification could indicate "The original work has been modified.";
+ to Distribute and Publicly Perform the Work including as incorporated in Collections; and,
+ to Distribute and Publicly Perform Adaptations.
+ For the avoidance of doubt:
+ .
+ Non-waivable Compulsory License Schemes. In those jurisdictions in which the right to collect royalties through any statutory or compulsory licensing scheme cannot be waived, the Licensor reserves the exclusive right to collect such royalties for any exercise by You of the rights granted under this License;
+ Waivable Compulsory License Schemes. In those jurisdictions in which the right to collect royalties through any statutory or compulsory licensing scheme can be waived, the Licensor waives the exclusive right to collect such royalties for any exercise by You of the rights granted under this License; and,
+ Voluntary License Schemes. The Licensor waives the right to collect royalties, whether individually or, in the event that the Licensor is a member of a collecting society that administers voluntary licensing schemes, via that society, from any exercise by You of the rights granted under this License.
+ The above rights may be exercised in all media and formats whether now known or hereafter devised. The above rights include the right to make such modifications as are technically necessary to exercise the rights in other media and formats. Subject to Section 8(f), all rights not expressly granted by Licensor are hereby reserved.
+ .
+ 4. Restrictions. The license granted in Section 3 above is expressly made subject to and limited by the following restrictions:
+ .
+ You may Distribute or Publicly Perform the Work only under the terms of this License. You must include a copy of, or the Uniform Resource Identifier (URI) for, this License with every copy of the Work You Distribute or Publicly Perform. You may not offer or impose any terms on the Work that restrict the terms of this License or the ability of the recipient of the Work to exercise the rights granted to that recipient under the terms of the License. You may not sublicense the Work. You must keep intact all notices that refer to this License and to the disclaimer of warranties with every copy of the Work You Distribute or Publicly Perform. When You Distribute or Publicly Perform the Work, You may not impose any effective technological measures on the Work that restrict the ability of a recipient of the Work from You to exercise the rights granted to that recipient under the terms of the License. This Section 4(a) applies to the Work as incorporated in a Collection, but this does not require the Collection apart from the Work itself to be made subject to the terms of this License. If You create a Collection, upon notice from any Licensor You must, to the extent practicable, remove from the Collection any credit as required by Section 4(b), as requested. If You create an Adaptation, upon notice from any Licensor You must, to the extent practicable, remove from the Adaptation any credit as required by Section 4(b), as requested.
+ If You Distribute, or Publicly Perform the Work or any Adaptations or Collections, You must, unless a request has been made pursuant to Section 4(a), keep intact all copyright notices for the Work and provide, reasonable to the medium or means You are utilizing: (i) the name of the Original Author (or pseudonym, if applicable) if supplied, and/or if the Original Author and/or Licensor designate another party or parties (e.g., a sponsor institute, publishing entity, journal) for attribution ("Attribution Parties") in Licensor's copyright notice, terms of service or by other reasonable means, the name of such party or parties; (ii) the title of the Work if supplied; (iii) to the extent reasonably practicable, the URI, if any, that Licensor specifies to be associated with the Work, unless such URI does not refer to the copyright notice or licensing information for the Work; and (iv) , consistent with Section 3(b), in the case of an Adaptation, a credit identifying the use of the Work in the Adaptation (e.g., "French translation of the Work by Original Author," or "Screenplay based on original Work by Original Author"). The credit required by this Section 4 (b) may be implemented in any reasonable manner; provided, however, that in the case of a Adaptation or Collection, at a minimum such credit will appear, if a credit for all contributing authors of the Adaptation or Collection appears, then as part of these credits and in a manner at least as prominent as the credits for the other contributing authors. For the avoidance of doubt, You may only use the credit required by this Section for the purpose of attribution in the manner set out above and, by exercising Your rights under this License, You may not implicitly or explicitly assert or imply any connection with, sponsorship or endorsement by the Original Author, Licensor and/or Attribution Parties, as appropriate, of You or Your use of the Work, without the separate, express prior written permission of the Original Author, Licensor and/or Attribution Parties.
+ Except as otherwise agreed in writing by the Licensor or as may be otherwise permitted by applicable law, if You Reproduce, Distribute or Publicly Perform the Work either by itself or as part of any Adaptations or Collections, You must not distort, mutilate, modify or take other derogatory action in relation to the Work which would be prejudicial to the Original Author's honor or reputation. Licensor agrees that in those jurisdictions (e.g. Japan), in which any exercise of the right granted in Section 3(b) of this License (the right to make Adaptations) would be deemed to be a distortion, mutilation, modification or other derogatory action prejudicial to the Original Author's honor and reputation, the Licensor will waive or not assert, as appropriate, this Section, to the fullest extent permitted by the applicable national law, to enable You to reasonably exercise Your right under Section 3(b) of this License (right to make Adaptations) but not otherwise.
+ 5. Representations, Warranties and Disclaimer
+ .
+ UNLESS OTHERWISE MUTUALLY AGREED TO BY THE PARTIES IN WRITING, LICENSOR OFFERS THE WORK AS-IS AND MAKES NO REPRESENTATIONS OR WARRANTIES OF ANY KIND CONCERNING THE WORK, EXPRESS, IMPLIED, STATUTORY OR OTHERWISE, INCLUDING, WITHOUT LIMITATION, WARRANTIES OF TITLE, MERCHANTIBILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS, ACCURACY, OR THE PRESENCE OF ABSENCE OF ERRORS, WHETHER OR NOT DISCOVERABLE. SOME JURISDICTIONS DO NOT ALLOW THE EXCLUSION OF IMPLIED WARRANTIES, SO SUCH EXCLUSION MAY NOT APPLY TO YOU.
+ .
+ 6. Limitation on Liability. EXCEPT TO THE EXTENT REQUIRED BY APPLICABLE LAW, IN NO EVENT WILL LICENSOR BE LIABLE TO YOU ON ANY LEGAL THEORY FOR ANY SPECIAL, INCIDENTAL, CONSEQUENTIAL, PUNITIVE OR EXEMPLARY DAMAGES ARISING OUT OF THIS LICENSE OR THE USE OF THE WORK, EVEN IF LICENSOR HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES.
+ .
+ 7. Termination
+ .
+ This License and the rights granted hereunder will terminate automatically upon any breach by You of the terms of this License. Individuals or entities who have received Adaptations or Collections from You under this License, however, will not have their licenses terminated provided such individuals or entities remain in full compliance with those licenses. Sections 1, 2, 5, 6, 7, and 8 will survive any termination of this License.
+ Subject to the above terms and conditions, the license granted here is perpetual (for the duration of the applicable copyright in the Work). Notwithstanding the above, Licensor reserves the right to release the Work under different license terms or to stop distributing the Work at any time; provided, however that any such election will not serve to withdraw this License (or any other license that has been, or is required to be, granted under the terms of this License), and this License will continue in full force and effect unless terminated as stated above.
+ 8. Miscellaneous
+ .
+ Each time You Distribute or Publicly Perform the Work or a Collection, the Licensor offers to the recipient a license to the Work on the same terms and conditions as the license granted to You under this License.
+ Each time You Distribute or Publicly Perform an Adaptation, Licensor offers to the recipient a license to the original Work on the same terms and conditions as the license granted to You under this License.
+ If any provision of this License is invalid or unenforceable under applicable law, it shall not affect the validity or enforceability of the remainder of the terms of this License, and without further action by the parties to this agreement, such provision shall be reformed to the minimum extent necessary to make such provision valid and enforceable.
+ No term or provision of this License shall be deemed waived and no breach consented to unless such waiver or consent shall be in writing and signed by the party to be charged with such waiver or consent.
+ This License constitutes the entire agreement between the parties with respect to the Work licensed here. There are no understandings, agreements or representations with respect to the Work not specified here. Licensor shall not be bound by any additional provisions that may appear in any communication from You. This License may not be modified without the mutual written agreement of the Licensor and You.
+ The rights granted under, and the subject matter referenced, in this License were drafted utilizing the terminology of the Berne Convention for the Protection of Literary and Artistic Works (as amended on September 28, 1979), the Rome Convention of 1961, the WIPO Copyright Treaty of 1996, the WIPO Performances and Phonograms Treaty of 1996 and the Universal Copyright Convention (as revised on July 24, 1971). These rights and subject matter take effect in the relevant jurisdiction in which the License terms are sought to be enforced according to the corresponding provisions of the implementation of those treaty provisions in the applicable national law. If the standard suite of rights granted under applicable copyright law includes additional rights not granted under this License, such additional rights are deemed to be included in the License; this License is not intended to restrict the license of any rights under applicable law.
+
+Files: usr/share/biomaj-watcher/src/war/images/stop.png
+Copyright: Tango harm-on-icons
+License: CC-BY 3.0
+ THE WORK (AS DEFINED BELOW) IS PROVIDED UNDER THE TERMS OF THIS CREATIVE COMMONS PUBLIC LICENSE ("CCPL" OR "LICENSE"). THE WORK IS PROTECTED BY COPYRIGHT AND/OR OTHER APPLICABLE LAW. ANY USE OF THE WORK OTHER THAN AS AUTHORIZED UNDER THIS LICENSE OR COPYRIGHT LAW IS PROHIBITED.
+ .
+ BY EXERCISING ANY RIGHTS TO THE WORK PROVIDED HERE, YOU ACCEPT AND AGREE TO BE BOUND BY THE TERMS OF THIS LICENSE. TO THE EXTENT THIS LICENSE MAY BE CONSIDERED TO BE A CONTRACT, THE LICENSOR GRANTS YOU THE RIGHTS CONTAINED HERE IN CONSIDERATION OF YOUR ACCEPTANCE OF SUCH TERMS AND CONDITIONS.
+ .
+ 1. Definitions
+ .
+ "Adaptation" means a work based upon the Work, or upon the Work and other pre-existing works, such as a translation, adaptation, derivative work, arrangement of music or other alterations of a literary or artistic work, or phonogram or performance and includes cinematographic adaptations or any other form in which the Work may be recast, transformed, or adapted including in any form recognizably derived from the original, except that a work that constitutes a Collection will not be considered an Adaptation for the purpose of this License. For the avoidance of doubt, where the Work is a musical work, performance or phonogram, the synchronization of the Work in timed-relation with a moving image ("synching") will be considered an Adaptation for the purpose of this License.
+ "Collection" means a collection of literary or artistic works, such as encyclopedias and anthologies, or performances, phonograms or broadcasts, or other works or subject matter other than works listed in Section 1(f) below, which, by reason of the selection and arrangement of their contents, constitute intellectual creations, in which the Work is included in its entirety in unmodified form along with one or more other contributions, each constituting separate and independent works in themselves, which together are assembled into a collective whole. A work that constitutes a Collection will not be considered an Adaptation (as defined above) for the purposes of this License.
+ "Distribute" means to make available to the public the original and copies of the Work or Adaptation, as appropriate, through sale or other transfer of ownership.
+ "Licensor" means the individual, individuals, entity or entities that offer(s) the Work under the terms of this License.
+ "Original Author" means, in the case of a literary or artistic work, the individual, individuals, entity or entities who created the Work or if no individual or entity can be identified, the publisher; and in addition (i) in the case of a performance the actors, singers, musicians, dancers, and other persons who act, sing, deliver, declaim, play in, interpret or otherwise perform literary or artistic works or expressions of folklore; (ii) in the case of a phonogram the producer being the person or legal entity who first fixes the sounds of a performance or other sounds; and, (iii) in the case of broadcasts, the organization that transmits the broadcast.
+ "Work" means the literary and/or artistic work offered under the terms of this License including without limitation any production in the literary, scientific and artistic domain, whatever may be the mode or form of its expression including digital form, such as a book, pamphlet and other writing; a lecture, address, sermon or other work of the same nature; a dramatic or dramatico-musical work; a choreographic work or entertainment in dumb show; a musical composition with or without words; a cinematographic work to which are assimilated works expressed by a process analogous to cinematography; a work of drawing, painting, architecture, sculpture, engraving or lithography; a photographic work to which are assimilated works expressed by a process analogous to photography; a work of applied art; an illustration, map, plan, sketch or three-dimensional work relative to geography, topography, architecture or science; a performance; a broadcast; a phonogram; a compilation of data to the extent it is protected as a copyrightable work; or a work performed by a variety or circus performer to the extent it is not otherwise considered a literary or artistic work.
+ "You" means an individual or entity exercising rights under this License who has not previously violated the terms of this License with respect to the Work, or who has received express permission from the Licensor to exercise rights under this License despite a previous violation.
+ "Publicly Perform" means to perform public recitations of the Work and to communicate to the public those public recitations, by any means or process, including by wire or wireless means or public digital performances; to make available to the public Works in such a way that members of the public may access these Works from a place and at a place individually chosen by them; to perform the Work to the public by any means or process and the communication to the public of the performances of the Work, including by public digital performance; to broadcast and rebroadcast the Work by any means including signs, sounds or images.
+ "Reproduce" means to make copies of the Work by any means including without limitation by sound or visual recordings and the right of fixation and reproducing fixations of the Work, including storage of a protected performance or phonogram in digital form or other electronic medium.
+ 2. Fair Dealing Rights. Nothing in this License is intended to reduce, limit, or restrict any uses free from copyright or rights arising from limitations or exceptions that are provided for in connection with the copyright protection under copyright law or other applicable laws.
+ .
+ 3. License Grant. Subject to the terms and conditions of this License, Licensor hereby grants You a worldwide, royalty-free, non-exclusive, perpetual (for the duration of the applicable copyright) license to exercise the rights in the Work as stated below:
+ .
+ to Reproduce the Work, to incorporate the Work into one or more Collections, and to Reproduce the Work as incorporated in the Collections;
+ to create and Reproduce Adaptations provided that any such Adaptation, including any translation in any medium, takes reasonable steps to clearly label, demarcate or otherwise identify that changes were made to the original Work. For example, a translation could be marked "The original work was translated from English to Spanish," or a modification could indicate "The original work has been modified.";
+ to Distribute and Publicly Perform the Work including as incorporated in Collections; and,
+ to Distribute and Publicly Perform Adaptations.
+ For the avoidance of doubt:
+ .
+ Non-waivable Compulsory License Schemes. In those jurisdictions in which the right to collect royalties through any statutory or compulsory licensing scheme cannot be waived, the Licensor reserves the exclusive right to collect such royalties for any exercise by You of the rights granted under this License;
+ Waivable Compulsory License Schemes. In those jurisdictions in which the right to collect royalties through any statutory or compulsory licensing scheme can be waived, the Licensor waives the exclusive right to collect such royalties for any exercise by You of the rights granted under this License; and,
+ Voluntary License Schemes. The Licensor waives the right to collect royalties, whether individually or, in the event that the Licensor is a member of a collecting society that administers voluntary licensing schemes, via that society, from any exercise by You of the rights granted under this License.
+ The above rights may be exercised in all media and formats whether now known or hereafter devised. The above rights include the right to make such modifications as are technically necessary to exercise the rights in other media and formats. Subject to Section 8(f), all rights not expressly granted by Licensor are hereby reserved.
+ .
+ 4. Restrictions. The license granted in Section 3 above is expressly made subject to and limited by the following restrictions:
+ .
+ You may Distribute or Publicly Perform the Work only under the terms of this License. You must include a copy of, or the Uniform Resource Identifier (URI) for, this License with every copy of the Work You Distribute or Publicly Perform. You may not offer or impose any terms on the Work that restrict the terms of this License or the ability of the recipient of the Work to exercise the rights granted to that recipient under the terms of the License. You may not sublicense the Work. You must keep intact all notices that refer to this License and to the disclaimer of warranties with every copy of the Work You Distribute or Publicly Perform. When You Distribute or Publicly Perform the Work, You may not impose any effective technological measures on the Work that restrict the ability of a recipient of the Work from You to exercise the rights granted to that recipient under the terms of the License. This Section 4(a) applies to the Work as incorporated in a Collection, but this does not require the Collection apart from the Work itself to be made subject to the terms of this License. If You create a Collection, upon notice from any Licensor You must, to the extent practicable, remove from the Collection any credit as required by Section 4(b), as requested. If You create an Adaptation, upon notice from any Licensor You must, to the extent practicable, remove from the Adaptation any credit as required by Section 4(b), as requested.
+ If You Distribute, or Publicly Perform the Work or any Adaptations or Collections, You must, unless a request has been made pursuant to Section 4(a), keep intact all copyright notices for the Work and provide, reasonable to the medium or means You are utilizing: (i) the name of the Original Author (or pseudonym, if applicable) if supplied, and/or if the Original Author and/or Licensor designate another party or parties (e.g., a sponsor institute, publishing entity, journal) for attribution ("Attribution Parties") in Licensor's copyright notice, terms of service or by other reasonable means, the name of such party or parties; (ii) the title of the Work if supplied; (iii) to the extent reasonably practicable, the URI, if any, that Licensor specifies to be associated with the Work, unless such URI does not refer to the copyright notice or licensing information for the Work; and (iv) , consistent with Section 3(b), in the case of an Adaptation, a credit identifying the use of the Work in the Adaptation (e.g., "French translation of the Work by Original Author," or "Screenplay based on original Work by Original Author"). The credit required by this Section 4 (b) may be implemented in any reasonable manner; provided, however, that in the case of a Adaptation or Collection, at a minimum such credit will appear, if a credit for all contributing authors of the Adaptation or Collection appears, then as part of these credits and in a manner at least as prominent as the credits for the other contributing authors. For the avoidance of doubt, You may only use the credit required by this Section for the purpose of attribution in the manner set out above and, by exercising Your rights under this License, You may not implicitly or explicitly assert or imply any connection with, sponsorship or endorsement by the Original Author, Licensor and/or Attribution Parties, as appropriate, of You or Your use of the Work, without the separate, express prior written permission of the Original Author, Licensor and/or Attribution Parties.
+ Except as otherwise agreed in writing by the Licensor or as may be otherwise permitted by applicable law, if You Reproduce, Distribute or Publicly Perform the Work either by itself or as part of any Adaptations or Collections, You must not distort, mutilate, modify or take other derogatory action in relation to the Work which would be prejudicial to the Original Author's honor or reputation. Licensor agrees that in those jurisdictions (e.g. Japan), in which any exercise of the right granted in Section 3(b) of this License (the right to make Adaptations) would be deemed to be a distortion, mutilation, modification or other derogatory action prejudicial to the Original Author's honor and reputation, the Licensor will waive or not assert, as appropriate, this Section, to the fullest extent permitted by the applicable national law, to enable You to reasonably exercise Your right under Section 3(b) of this License (right to make Adaptations) but not otherwise.
+ 5. Representations, Warranties and Disclaimer
+ .
+ UNLESS OTHERWISE MUTUALLY AGREED TO BY THE PARTIES IN WRITING, LICENSOR OFFERS THE WORK AS-IS AND MAKES NO REPRESENTATIONS OR WARRANTIES OF ANY KIND CONCERNING THE WORK, EXPRESS, IMPLIED, STATUTORY OR OTHERWISE, INCLUDING, WITHOUT LIMITATION, WARRANTIES OF TITLE, MERCHANTIBILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS, ACCURACY, OR THE PRESENCE OF ABSENCE OF ERRORS, WHETHER OR NOT DISCOVERABLE. SOME JURISDICTIONS DO NOT ALLOW THE EXCLUSION OF IMPLIED WARRANTIES, SO SUCH EXCLUSION MAY NOT APPLY TO YOU.
+ .
+ 6. Limitation on Liability. EXCEPT TO THE EXTENT REQUIRED BY APPLICABLE LAW, IN NO EVENT WILL LICENSOR BE LIABLE TO YOU ON ANY LEGAL THEORY FOR ANY SPECIAL, INCIDENTAL, CONSEQUENTIAL, PUNITIVE OR EXEMPLARY DAMAGES ARISING OUT OF THIS LICENSE OR THE USE OF THE WORK, EVEN IF LICENSOR HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES.
+ .
+ 7. Termination
+ .
+ This License and the rights granted hereunder will terminate automatically upon any breach by You of the terms of this License. Individuals or entities who have received Adaptations or Collections from You under this License, however, will not have their licenses terminated provided such individuals or entities remain in full compliance with those licenses. Sections 1, 2, 5, 6, 7, and 8 will survive any termination of this License.
+ Subject to the above terms and conditions, the license granted here is perpetual (for the duration of the applicable copyright in the Work). Notwithstanding the above, Licensor reserves the right to release the Work under different license terms or to stop distributing the Work at any time; provided, however that any such election will not serve to withdraw this License (or any other license that has been, or is required to be, granted under the terms of this License), and this License will continue in full force and effect unless terminated as stated above.
+ 8. Miscellaneous
+ .
+ Each time You Distribute or Publicly Perform the Work or a Collection, the Licensor offers to the recipient a license to the Work on the same terms and conditions as the license granted to You under this License.
+ Each time You Distribute or Publicly Perform an Adaptation, Licensor offers to the recipient a license to the original Work on the same terms and conditions as the license granted to You under this License.
+ If any provision of this License is invalid or unenforceable under applicable law, it shall not affect the validity or enforceability of the remainder of the terms of this License, and without further action by the parties to this agreement, such provision shall be reformed to the minimum extent necessary to make such provision valid and enforceable.
+ No term or provision of this License shall be deemed waived and no breach consented to unless such waiver or consent shall be in writing and signed by the party to be charged with such waiver or consent.
+ This License constitutes the entire agreement between the parties with respect to the Work licensed here. There are no understandings, agreements or representations with respect to the Work not specified here. Licensor shall not be bound by any additional provisions that may appear in any communication from You. This License may not be modified without the mutual written agreement of the Licensor and You.
+ The rights granted under, and the subject matter referenced, in this License were drafted utilizing the terminology of the Berne Convention for the Protection of Literary and Artistic Works (as amended on September 28, 1979), the Rome Convention of 1961, the WIPO Copyright Treaty of 1996, the WIPO Performances and Phonograms Treaty of 1996 and the Universal Copyright Convention (as revised on July 24, 1971). These rights and subject matter take effect in the relevant jurisdiction in which the License terms are sought to be enforced according to the corresponding provisions of the implementation of those treaty provisions in the applicable national law. If the standard suite of rights granted under applicable copyright law includes additional rights not granted under this License, such additional rights are deemed to be included in the License; this License is not intended to restrict the license of any rights under applicable law.
+
+Files: usr/share/biomaj-watcher/src/war/images/bank-detail.png usr/share/biomaj-watcher/src/war/images/bank-detail_Disabled.png usr/share/biomaj-watcher/src/war/images/code-block.png usr/share/biomaj-watcher/src/war/images/help-hint.png usr/share/biomaj-watcher/src/war/images/vcs-conflicting.png usr/share/biomaj-watcher/src/war/images/view-calendar.png
+Copyright: 2007-2009, David Vignoni <david at icon-king.com>
+ 2007-2009, Johann Ollivier Lapeyre <johann at oxygen-icons.org>
+ 2007-2009, Kenneth Wimer <kwwii at bootsplash.org>
+ 2007-2009, Nuno Fernades Pinheiro <nf.pinheiro at gmail.com>
+ 2007-2009, Riccardo Iaconelli <riccardo at oxygen-icons.org>
+ 2007-2009, David Miller <miller at oxygen-icons.org>
+License: LGPL-2.1
+ On Debian systems, the full text of the license
+ can be found in the file
+ `/usr/share/common-licenses/LGPL-2.1'
+
+
+Files: usr/share/biomaj-watcher/src/war/images/edit-find-5.png usr/share/biomaj-watcher/src/war/images/update_all.png usr/share/biomaj-watcher/src/war/images/update_all_Disabled.pngusr/share/biomaj-watcher/src/war/images/view-refresh.png usr/share/biomaj-watcher/src/war/images/zoom-3.png
+Copyright: 2003-2004 David Vignoni
+License: LGPL-2.1
+ On Debian systems, the full text of the license
+ can be found in the file
+ `/usr/share/common-licenses/LGPL-2.1'
+
+Files: usr/share/biomaj-watcher/src/war/images/edit-redo.png usr/share/biomaj-watcher/src/war/images/help-hint.png usr/share/biomaj-watcher/src/war/images/list-remove.png
+Copyright: Intrigue Icon Set 0.6.2 [Green]
+License: GPL-2
+ On Debian systems, the full text of the license
+ can be found in the file
+ `/usr/share/common-licenses/GPL-2'
+
+Files: usr/share/biomaj-watcher/src/war/images/help-about.png
+Copyright: GNOME Icon Theme 2.26.0 (gnome)
+License: GPL-2
+ On Debian systems, the full text of the license
+ can be found in the file
+ `/usr/share/common-licenses/GPL-2'
+
+Files: usr/share/biomaj-watcher/src/war/images/view-refresh-4.png
+Copyright: Tango Icon Library 0.8.90
+License: GPL-2
+ On Debian systems, the full text of the license
+ can be found in the file
+ `/usr/share/common-licenses/GPL-2'
+
+
+Files: usr/share/biomaj-watcher/src/extlib/smartgwt.jar usr/share/biomaj-watcher/src/extlib/smartgwt-skins.jar
+Copyright: 2008 and beyond Isomorphic software
+License: LGPL-3
+ On Debian systems, the full text of the license
+ can be found in the file
+ `/usr/share/common-licenses/LGPL-3'
+
+Files: usr/share/biomaj-watcher/src/extlib/gwt-visualization.jar
+Copyright: 2010 Google
+License: Apache 2.0
+ On Debian systems, the full text of the license
+ can be found in the file
+ `/usr/share/common-licenses/Apache-2.0'
+
+
+Files: usr/share/biomaj-watcher/src/extlib/gwt-dnd-3.0.1.jar usr/share/biomaj-watcher/src/extlib/gwt-cal-0.9.0.jar
+Copyright: 2009,2010 Scottsdale Software LCC
+License: GPL v3+
+ On Debian systems, the full text of the GNU General Public
+ License version 3 can be found in the file
+ `/usr/share/common-licenses/GPL-3'
+
+
+Files: usr/share/biomaj-watcher/src/gwt/*
+Copyright:
+ Copyright 2010 Google
+ Includes Apache Tomcat Copyright Apache Foundation, license Apache 2.0
+ Includes Browser Detect v2.1.6 Copyright XXX, license Creative Commons Attribution 1.0
+ Includes Eclipse Java Development Tools Copyright XXX, license Eclipse Public License v. 1.0
+ Includes Eclipse Standard Widget Toolkit Copyright XXX, license Eclipse Public License v. 1.0
+ Includes HtmlUnit Copyright XXX, license Apache 2.0
+ Includes JFreeChart Copyright XXX, license LGPL v2.1
+ Includes Mozilla Rhino Copyright XXX, license Mozilla Public License v. 1.1
+ Includes Mozilla 1.7.12 Copyright XXX, license Mozilla Public License V. 1.1
+ Includes Protocol Buffers Copyright XXX, license BSD 2
+License:
+ Includes Browser Detect licensed under terms:
+ THE WORK (AS DEFINED BELOW) IS PROVIDED UNDER THE TERMS OF THIS CREATIVE COMMONS PUBLIC LICENSE ("CCPL" OR "LICENSE"). THE WORK IS PROTECTED BY COPYRIGHT AND/OR OTHER APPLICABLE LAW. ANY USE OF THE WORK OTHER THAN AS AUTHORIZED UNDER THIS LICENSE OR COPYRIGHT LAW IS PROHIBITED.
+ .
+ BY EXERCISING ANY RIGHTS TO THE WORK PROVIDED HERE, YOU ACCEPT AND AGREE TO BE BOUND BY THE TERMS OF THIS LICENSE. TO THE EXTENT THIS LICENSE MAY BE CONSIDERED TO BE A CONTRACT, THE LICENSOR GRANTS YOU THE RIGHTS CONTAINED HERE IN CONSIDERATION OF YOUR ACCEPTANCE OF SUCH TERMS AND CONDITIONS.
+ .
+ 1. Definitions
+ .
+ "Collective Work" means a work, such as a periodical issue, anthology or encyclopedia, in which the Work in its entirety in unmodified form, along with one or more other contributions, constituting separate and independent works in themselves, are assembled into a collective whole. A work that constitutes a Collective Work will not be considered a Derivative Work (as defined below) for the purposes of this License.
+ "Derivative Work" means a work based upon the Work or upon the Work and other pre-existing works, such as a translation, musical arrangement, dramatization, fictionalization, motion picture version, sound recording, art reproduction, abridgment, condensation, or any other form in which the Work may be recast, transformed, or adapted, except that a work that constitutes a Collective Work will not be considered a Derivative Work for the purpose of this License. For the avoidance of doubt, where the Work is a musical composition or sound recording, the synchronization of the Work in timed-relation with a moving image ("synching") will be considered a Derivative Work for the purpose of this License.
+ "Licensor" means the individual, individuals, entity or entities that offers the Work under the terms of this License.
+ "Original Author" means the individual, individuals, entity or entities who created the Work.
+ "Work" means the copyrightable work of authorship offered under the terms of this License.
+ "You" means an individual or entity exercising rights under this License who has not previously violated the terms of this License with respect to the Work, or who has received express permission from the Licensor to exercise rights under this License despite a previous violation.
+ 2. Fair Use Rights. Nothing in this license is intended to reduce, limit, or restrict any rights arising from fair use, first sale or other limitations on the exclusive rights of the copyright owner under copyright law or other applicable laws.
+ .
+ 3. License Grant. Subject to the terms and conditions of this License, Licensor hereby grants You a worldwide, royalty-free, non-exclusive, perpetual (for the duration of the applicable copyright) license to exercise the rights in the Work as stated below:
+ .
+ to reproduce the Work, to incorporate the Work into one or more Collective Works, and to reproduce the Work as incorporated in the Collective Works;
+ to create and reproduce Derivative Works provided that any such Derivative Work, including any translation in any medium, takes reasonable steps to clearly label, demarcate or otherwise identify that changes were made to the original Work. For example, a translation could be marked "The original work was translated from English to Spanish," or a modification could indicate "The original work has been modified.";;
+ to distribute copies or phonorecords of, display publicly, perform publicly, and perform publicly by means of a digital audio transmission the Work including as incorporated in Collective Works;
+ to distribute copies or phonorecords of, display publicly, perform publicly, and perform publicly by means of a digital audio transmission Derivative Works.
+ For the avoidance of doubt, where the Work is a musical composition:
+ .
+ Performance Royalties Under Blanket Licenses. Licensor waives the exclusive right to collect, whether individually or, in the event that Licensor is a member of a performance rights society (e.g. ASCAP, BMI, SESAC), via that society, royalties for the public performance or public digital performance (e.g. webcast) of the Work.
+ Mechanical Rights and Statutory Royalties. Licensor waives the exclusive right to collect, whether individually or via a music rights agency or designated agent (e.g. Harry Fox Agency), royalties for any phonorecord You create from the Work ("cover version") and distribute, subject to the compulsory license created by 17 USC Section 115 of the US Copyright Act (or the equivalent in other jurisdictions).
+ Webcasting Rights and Statutory Royalties. For the avoidance of doubt, where the Work is a sound recording, Licensor waives the exclusive right to collect, whether individually or via a performance-rights society (e.g. SoundExchange), royalties for the public digital performance (e.g. webcast) of the Work, subject to the compulsory license created by 17 USC Section 114 of the US Copyright Act (or the equivalent in other jurisdictions).
+ The above rights may be exercised in all media and formats whether now known or hereafter devised. The above rights include the right to make such modifications as are technically necessary to exercise the rights in other media and formats. All rights not expressly granted by Licensor are hereby reserved.
+ .
+ 4. Restrictions. The license granted in Section 3 above is expressly made subject to and limited by the following restrictions:
+ .
+ You may distribute, publicly display, publicly perform, or publicly digitally perform the Work only under the terms of this License, and You must include a copy of, or the Uniform Resource Identifier for, this License with every copy or phonorecord of the Work You distribute, publicly display, publicly perform, or publicly digitally perform. You may not offer or impose any terms on the Work that restrict the terms of this License or the ability of a recipient of the Work to exercise the rights granted to that recipient under the terms of the License. You may not sublicense the Work. You must keep intact all notices that refer to this License and to the disclaimer of warranties. When You distribute, publicly display, publicly perform, or publicly digitally perform the Work, You may not impose any technological measures on the Work that restrict the ability of a recipient of the Work from You to exercise the rights granted to that recipient under the terms of the License. This Section 4(a) applies to the Work as incorporated in a Collective Work, but this does not require the Collective Work apart from the Work itself to be made subject to the terms of this License. If You create a Collective Work, upon notice from any Licensor You must, to the extent practicable, remove from the Collective Work any credit as required by Section 4(b), as requested. If You create a Derivative Work, upon notice from any Licensor You must, to the extent practicable, remove from the Derivative Work any credit as required by Section 4(b), as requested.
+ If You distribute, publicly display, publicly perform, or publicly digitally perform the Work (as defined in Section 1 above) or any Derivative Works (as defined in Section 1 above) or Collective Works (as defined in Section 1 above), You must, unless a request has been made pursuant to Section 4(a), keep intact all copyright notices for the Work and provide, reasonable to the medium or means You are utilizing: (i) the name of the Original Author (or pseudonym, if applicable) if supplied, and/or (ii) if the Original Author and/or Licensor designate another party or parties (e.g. a sponsor institute, publishing entity, journal) for attribution ("Attribution Parties") in Licensor's copyright notice, terms of service or by other reasonable means, the name of such party or parties; the title of the Work if supplied; to the extent reasonably practicable, the Uniform Resource Identifier, if any, that Licensor specifies to be associated with the Work, unless such URI does not refer to the copyright notice or licensing information for the Work; and, consistent with Section 3(b) in the case of a Derivative Work, a credit identifying the use of the Work in the Derivative Work (e.g., "French translation of the Work by Original Author," or "Screenplay based on original Work by Original Author"). The credit required by this Section 4(b) may be implemented in any reasonable manner; provided, however, that in the case of a Derivative Work or Collective Work, at a minimum such credit will appear, if a credit for all contributing authors of the Derivative Work or Collective Work appears, then as part of these credits and in a manner at least as prominent as the credits for the other contributing authors. For the avoidance of doubt, You may only use the credit required by this Section for the purpose of attribution in the manner set out above and, by exercising Your rights under this License, You may not implicitly or explicitly assert or imply any connection with, sponsorship or endorsement by the Original Author, Licensor and/or Attribution Parties, as appropriate, of You or Your use of the Work, without the separate, express prior written permission of the Original Author, Licensor and/or Attribution Parties.
+ 5. Representations, Warranties and Disclaimer
+ .
+ UNLESS OTHERWISE MUTUALLY AGREED TO BY THE PARTIES IN WRITING, LICENSOR OFFERS THE WORK AS-IS AND ONLY TO THE EXTENT OF ANY RIGHTS HELD IN THE LICENSED WORK BY THE LICENSOR. THE LICENSOR MAKES NO REPRESENTATIONS OR WARRANTIES OF ANY KIND CONCERNING THE WORK, EXPRESS, IMPLIED, STATUTORY OR OTHERWISE, INCLUDING, WITHOUT LIMITATION, WARRANTIES OF TITLE, MARKETABILITY, MERCHANTIBILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS, ACCURACY, OR THE PRESENCE OF ABSENCE OF ERRORS, WHETHER OR NOT DISCOVERABLE. SOME JURISDICTIONS DO NOT ALLOW THE EXCLUSION OF IMPLIED WARRANTIES, SO SUCH EXCLUSION MAY NOT APPLY TO YOU.
+ .
+ 6. Limitation on Liability. EXCEPT TO THE EXTENT REQUIRED BY APPLICABLE LAW, IN NO EVENT WILL LICENSOR BE LIABLE TO YOU ON ANY LEGAL THEORY FOR ANY SPECIAL, INCIDENTAL, CONSEQUENTIAL, PUNITIVE OR EXEMPLARY DAMAGES ARISING OUT OF THIS LICENSE OR THE USE OF THE WORK, EVEN IF LICENSOR HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES.
+ .
+ 7. Termination
+ .
+ This License and the rights granted hereunder will terminate automatically upon any breach by You of the terms of this License. Individuals or entities who have received Derivative Works (as defined in Section 1 above) or Collective Works (as defined in Section 1 above) from You under this License, however, will not have their licenses terminated provided such individuals or entities remain in full compliance with those licenses. Sections 1, 2, 5, 6, 7, and 8 will survive any termination of this License.
+ Subject to the above terms and conditions, the license granted here is perpetual (for the duration of the applicable copyright in the Work). Notwithstanding the above, Licensor reserves the right to release the Work under different license terms or to stop distributing the Work at any time; provided, however that any such election will not serve to withdraw this License (or any other license that has been, or is required to be, granted under the terms of this License), and this License will continue in full force and effect unless terminated as stated above.
+ 8. Miscellaneous
+ .
+ Each time You distribute or publicly digitally perform the Work (as defined in Section 1 above) or a Collective Work (as defined in Section 1 above), the Licensor offers to the recipient a license to the Work on the same terms and conditions as the license granted to You under this License.
+ Each time You distribute or publicly digitally perform a Derivative Work, Licensor offers to the recipient a license to the original Work on the same terms and conditions as the license granted to You under this License.
+ If any provision of this License is invalid or unenforceable under applicable law, it shall not affect the validity or enforceability of the remainder of the terms of this License, and without further action by the parties to this agreement, such provision shall be reformed to the minimum extent necessary to make such provision valid and enforceable.
+ No term or provision of this License shall be deemed waived and no breach consented to unless such waiver or consent shall be in writing and signed by the party to be charged with such waiver or consent.
+ This License constitutes the entire agreement between the parties with respect to the Work licensed here. There are no understandings, agreements or representations with respect to the Work not specified here. Licensor shall not be bound by any additional provisions that may appear in any communication from You. This License may not be modified without the mutual written agreement of the Licensor and You.
+ .
+ Includes Eclipse Java Development Tools and Standard Widget Toolkt licensed under terms:
+ THE ACCOMPANYING PROGRAM IS PROVIDED UNDER THE TERMS OF THIS ECLIPSE PUBLIC LICENSE ("AGREEMENT"). ANY USE, REPRODUCTION OR DISTRIBUTION OF THE PROGRAM CONSTITUTES RECIPIENT'S ACCEPTANCE OF THIS AGREEMENT.
+ .
+ 1. DEFINITIONS
+ .
+ "Contribution" means:
+ .
+ a) in the case of the initial Contributor, the initial code and documentation distributed under this Agreement, and
+ b) in the case of each subsequent Contributor:
+ i) changes to the Program, and
+ ii) additions to the Program;
+ where such changes and/or additions to the Program originate from and are distributed by that particular Contributor. A Contribution 'originates' from a Contributor if it was added to the Program by such Contributor itself or anyone acting on such Contributor's behalf. Contributions do not include additions to the Program which: (i) are separate modules of software distributed in conjunction with the Program under their own license agreement, and (ii) are not derivative works of the Program.
+ "Contributor" means any person or entity that distributes the Program.
+ .
+ "Licensed Patents" mean patent claims licensable by a Contributor which are necessarily infringed by the use or sale of its Contribution alone or when combined with the Program.
+ .
+ "Program" means the Contributions distributed in accordance with this Agreement.
+ .
+ "Recipient" means anyone who receives the Program under this Agreement, including all Contributors.
+ .
+ 2. GRANT OF RIGHTS
+ .
+ a) Subject to the terms of this Agreement, each Contributor hereby grants Recipient a non-exclusive, worldwide, royalty-free copyright license to reproduce, prepare derivative works of, publicly display, publicly perform, distribute and sublicense the Contribution of such Contributor, if any, and such derivative works, in source code and object code form.
+ b) Subject to the terms of this Agreement, each Contributor hereby grants Recipient a non-exclusive, worldwide, royalty-free patent license under Licensed Patents to make, use, sell, offer to sell, import and otherwise transfer the Contribution of such Contributor, if any, in source code and object code form. This patent license shall apply to the combination of the Contribution and the Program if, at the time the Contribution is added by the Contributor, such addition of the Contribution causes such combination to be covered by the Licensed Patents. The patent license shall not apply to any other combinations which include the Contribution. No hardware per se is licensed hereunder.
+ c) Recipient understands that although each Contributor grants the licenses to its Contributions set forth herein, no assurances are provided by any Contributor that the Program does not infringe the patent or other intellectual property rights of any other entity. Each Contributor disclaims any liability to Recipient for claims brought by any other entity based on infringement of intellectual property rights or otherwise. As a condition to exercising the rights and licenses granted hereunder, each Recipient hereby assumes sole responsibility to secure any other intellectual property rights needed, if any. For example, if a third party patent license is required to allow Recipient to distribute the Program, it is Recipient's responsibility to acquire that license before distributing the Program.
+ d) Each Contributor represents that to its knowledge it has sufficient copyright rights in its Contribution, if any, to grant the copyright license set forth in this Agreement.
+ 3. REQUIREMENTS
+ .
+ A Contributor may choose to distribute the Program in object code form under its own license agreement, provided that:
+ .
+ a) it complies with the terms and conditions of this Agreement; and
+ b) its license agreement:
+ i) effectively disclaims on behalf of all Contributors all warranties and conditions, express and implied, including warranties or conditions of title and non-infringement, and implied warranties or conditions of merchantability and fitness for a particular purpose;
+ ii) effectively excludes on behalf of all Contributors all liability for damages, including direct, indirect, special, incidental and consequential damages, such as lost profits;
+ iii) states that any provisions which differ from this Agreement are offered by that Contributor alone and not by any other party; and
+ iv) states that source code for the Program is available from such Contributor, and informs licensees how to obtain it in a reasonable manner on or through a medium customarily used for software exchange.
+ When the Program is made available in source code form:
+ .
+ a) it must be made available under this Agreement; and
+ b) a copy of this Agreement must be included with each copy of the Program.
+ Contributors may not remove or alter any copyright notices contained within the Program.
+ .
+ Each Contributor must identify itself as the originator of its Contribution, if any, in a manner that reasonably allows subsequent Recipients to identify the originator of the Contribution.
+ .
+ 4. COMMERCIAL DISTRIBUTION
+ .
+ Commercial distributors of software may accept certain responsibilities with respect to end users, business partners and the like. While this license is intended to facilitate the commercial use of the Program, the Contributor who includes the Program in a commercial product offering should do so in a manner which does not create potential liability for other Contributors. Therefore, if a Contributor includes the Program in a commercial product offering, such Contributor ("Commercial Contributor") hereby agrees to defend and indemnify every other Contributor ("Indemnified Contributor") against any losses, damages and costs (collectively "Losses") arising from claims, lawsuits and other legal actions brought by a third party against the Indemnified Contributor to the extent caused by the acts or omissions of such Commercial Contributor in connection with its distribution of the Program in a commercial product offering. The obligations in this section do not apply to any claims or Losses relating to any actual or alleged intellectual property infringement. In order to qualify, an Indemnified Contributor must: a) promptly notify the Commercial Contributor in writing of such claim, and b) allow the Commercial Contributor to control, and cooperate with the Commercial Contributor in, the defense and any related settlement negotiations. The Indemnified Contributor may participate in any such claim at its own expense.
+ .
+ For example, a Contributor might include the Program in a commercial product offering, Product X. That Contributor is then a Commercial Contributor. If that Commercial Contributor then makes performance claims, or offers warranties related to Product X, those performance claims and warranties are such Commercial Contributor's responsibility alone. Under this section, the Commercial Contributor would have to defend claims against the other Contributors related to those performance claims and warranties, and if a court requires any other Contributor to pay any damages as a result, the Commercial Contributor must pay those damages.
+ .
+ 5. NO WARRANTY
+ .
+ EXCEPT AS EXPRESSLY SET FORTH IN THIS AGREEMENT, THE PROGRAM IS PROVIDED ON AN "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, EITHER EXPRESS OR IMPLIED INCLUDING, WITHOUT LIMITATION, ANY WARRANTIES OR CONDITIONS OF TITLE, NON-INFRINGEMENT, MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE. Each Recipient is solely responsible for determining the appropriateness of using and distributing the Program and assumes all risks associated with its exercise of rights under this Agreement , including but not limited to the risks and costs of program errors, compliance with applicable laws, damage to or loss of data, programs or equipment, and unavailability or interruption of operations.
+ .
+ 6. DISCLAIMER OF LIABILITY
+ .
+ EXCEPT AS EXPRESSLY SET FORTH IN THIS AGREEMENT, NEITHER RECIPIENT NOR ANY CONTRIBUTORS SHALL HAVE ANY LIABILITY FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING WITHOUT LIMITATION LOST PROFITS), HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OR DISTRIBUTION OF THE PROGRAM OR THE EXERCISE OF ANY RIGHTS GRANTED HEREUNDER, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGES.
+ .
+ 7. GENERAL
+ .
+ If any provision of this Agreement is invalid or unenforceable under applicable law, it shall not affect the validity or enforceability of the remainder of the terms of this Agreement, and without further action by the parties hereto, such provision shall be reformed to the minimum extent necessary to make such provision valid and enforceable.
+ .
+ If Recipient institutes patent litigation against any entity (including a cross-claim or counterclaim in a lawsuit) alleging that the Program itself (excluding combinations of the Program with other software or hardware) infringes such Recipient's patent(s), then such Recipient's rights granted under Section 2(b) shall terminate as of the date such litigation is filed.
+ .
+ All Recipient's rights under this Agreement shall terminate if it fails to comply with any of the material terms or conditions of this Agreement and does not cure such failure in a reasonable period of time after becoming aware of such noncompliance. If all Recipient's rights under this Agreement terminate, Recipient agrees to cease use and distribution of the Program as soon as reasonably practicable. However, Recipient's obligations under this Agreement and any licenses granted by Recipient relating to the Program shall continue and survive.
+ .
+ Everyone is permitted to copy and distribute copies of this Agreement, but in order to avoid inconsistency the Agreement is copyrighted and may only be modified in the following manner. The Agreement Steward reserves the right to publish new versions (including revisions) of this Agreement from time to time. No one other than the Agreement Steward has the right to modify this Agreement. The Eclipse Foundation is the initial Agreement Steward. The Eclipse Foundation may assign the responsibility to serve as the Agreement Steward to a suitable separate entity. Each new version of the Agreement will be given a distinguishing version number. The Program (including Contributions) may always be distributed subject to the version of the Agreement under which it was received. In addition, after a new version of the Agreement is published, Contributor may elect to distribute the Program (including its Contributions) under the new version. Except as expressly stated in Sections 2(a) and 2(b) above, Recipient receives no rights or licenses to the intellectual property of any Contributor under this Agreement, whether expressly, by implication, estoppel or otherwise. All rights in the Program not expressly granted under this Agreement are reserved.
+ .
+ This Agreement is governed by the laws of the State of New York and the intellectual property laws of the United States of America. No party to this Agreement will bring a legal action under this Agreement more than one year after the cause of action arose. Each party waives its rights to a jury trial in any resulting litigation.
+ Includes Mozilla Rhino and Mozilla licensed unter terms:
+ 1. Definitions.
+ .
+ 1.0.1. "Commercial Use"
+ means distribution or otherwise making the Covered Code available to a third party.
+ 1.1. "Contributor"
+ means each entity that creates or contributes to the creation of Modifications.
+ 1.2. "Contributor Version"
+ means the combination of the Original Code, prior Modifications used by a Contributor, and the Modifications made by that particular Contributor.
+ 1.3. "Covered Code"
+ means the Original Code or Modifications or the combination of the Original Code and Modifications, in each case including portions thereof.
+ 1.4. "Electronic Distribution Mechanism"
+ means a mechanism generally accepted in the software development community for the electronic transfer of data.
+ 1.5. "Executable"
+ means Covered Code in any form other than Source Code.
+ 1.6. "Initial Developer"
+ means the individual or entity identified as the Initial Developer in the Source Code notice required by Exhibit A.
+ 1.7. "Larger Work"
+ means a work which combines Covered Code or portions thereof with code not governed by the terms of this License.
+ 1.8. "License"
+ means this document.
+ 1.8.1. "Licensable"
+ means having the right to grant, to the maximum extent possible, whether at the time of the initial grant or subsequently acquired, any and all of the rights conveyed herein.
+ 1.9. "Modifications"
+ means any addition to or deletion from the substance or structure of either the Original Code or any previous Modifications. When Covered Code is released as a series of files, a Modification is:
+ Any addition to or deletion from the contents of a file containing Original Code or previous Modifications.
+ Any new file that contains any part of the Original Code or previous Modifications.
+ 1.10. "Original Code"
+ means Source Code of computer software code which is described in the Source Code notice required by Exhibit A as Original Code, and which, at the time of its release under this License is not already Covered Code governed by this License.
+ 1.10.1. "Patent Claims"
+ means any patent claim(s), now owned or hereafter acquired, including without limitation, method, process, and apparatus claims, in any patent Licensable by grantor.
+ 1.11. "Source Code"
+ means the preferred form of the Covered Code for making modifications to it, including all modules it contains, plus any associated interface definition files, scripts used to control compilation and installation of an Executable, or source code differential comparisons against either the Original Code or another well known, available Covered Code of the Contributor's choice. The Source Code can be in a compressed or archival form, provided the appropriate decompression or de-archiving software is widely available for no charge.
+ 1.12. "You" (or "Your")
+ means an individual or a legal entity exercising rights under, and complying with all of the terms of, this License or a future version of this License issued under Section 6.1. For legal entities, "You" includes any entity which controls, is controlled by, or is under common control with You. For purposes of this definition, "control" means (a) the power, direct or indirect, to cause the direction or management of such entity, whether by contract or otherwise, or (b) ownership of more than fifty percent (50%) of the outstanding shares or beneficial ownership of such entity.
+ 2. Source Code License.
+ .
+ 2.1. The Initial Developer Grant.
+ .
+ The Initial Developer hereby grants You a world-wide, royalty-free, non-exclusive license, subject to third party intellectual property claims:
+ .
+ under intellectual property rights (other than patent or trademark) Licensable by Initial Developer to use, reproduce, modify, display, perform, sublicense and distribute the Original Code (or portions thereof) with or without Modifications, and/or as part of a Larger Work; and
+ under Patents Claims infringed by the making, using or selling of Original Code, to make, have made, use, practice, sell, and offer for sale, and/or otherwise dispose of the Original Code (or portions thereof).
+ the licenses granted in this Section 2.1 (a) and (b) are effective on the date Initial Developer first distributes Original Code under the terms of this License.
+ Notwithstanding Section 2.1 (b) above, no patent license is granted: 1) for code that You delete from the Original Code; 2) separate from the Original Code; or 3) for infringements caused by: i) the modification of the Original Code or ii) the combination of the Original Code with other software or devices.
+ 2.2. Contributor Grant.
+ .
+ Subject to third party intellectual property claims, each Contributor hereby grants You a world-wide, royalty-free, non-exclusive license
+ .
+ under intellectual property rights (other than patent or trademark) Licensable by Contributor, to use, reproduce, modify, display, perform, sublicense and distribute the Modifications created by such Contributor (or portions thereof) either on an unmodified basis, with other Modifications, as Covered Code and/or as part of a Larger Work; and
+ under Patent Claims infringed by the making, using, or selling of Modifications made by that Contributor either alone and/or in combination with its Contributor Version (or portions of such combination), to make, use, sell, offer for sale, have made, and/or otherwise dispose of: 1) Modifications made by that Contributor (or portions thereof); and 2) the combination of Modifications made by that Contributor with its Contributor Version (or portions of such combination).
+ the licenses granted in Sections 2.2 (a) and 2.2 (b) are effective on the date Contributor first makes Commercial Use of the Covered Code.
+ Notwithstanding Section 2.2 (b) above, no patent license is granted: 1) for any code that Contributor has deleted from the Contributor Version; 2) separate from the Contributor Version; 3) for infringements caused by: i) third party modifications of Contributor Version or ii) the combination of Modifications made by that Contributor with other software (except as part of the Contributor Version) or other devices; or 4) under Patent Claims infringed by Covered Code in the absence of Modifications made by that Contributor.
+ 3. Distribution Obligations.
+ .
+ 3.1. Application of License.
+ .
+ The Modifications which You create or to which You contribute are governed by the terms of this License, including without limitation Section 2.2. The Source Code version of Covered Code may be distributed only under the terms of this License or a future version of this License released under Section 6.1, and You must include a copy of this License with every copy of the Source Code You distribute. You may not offer or impose any terms on any Source Code version that alters or restricts the applicable version of this License or the recipients' rights hereunder. However, You may include an additional document offering the additional rights described in Section 3.5.
+ .
+ 3.2. Availability of Source Code.
+ .
+ Any Modification which You create or to which You contribute must be made available in Source Code form under the terms of this License either on the same media as an Executable version or via an accepted Electronic Distribution Mechanism to anyone to whom you made an Executable version available; and if made available via Electronic Distribution Mechanism, must remain available for at least twelve (12) months after the date it initially became available, or at least six (6) months after a subsequent version of that particular Modification has been made available to such recipients. You are responsible for ensuring that the Source Code version remains available even if the Electronic Distribution Mechanism is maintained by a third party.
+ .
+ 3.3. Description of Modifications.
+ .
+ You must cause all Covered Code to which You contribute to contain a file documenting the changes You made to create that Covered Code and the date of any change. You must include a prominent statement that the Modification is derived, directly or indirectly, from Original Code provided by the Initial Developer and including the name of the Initial Developer in (a) the Source Code, and (b) in any notice in an Executable version or related documentation in which You describe the origin or ownership of the Covered Code.
+ .
+ 3.4. Intellectual Property Matters
+ .
+ (a) Third Party Claims
+ .
+ If Contributor has knowledge that a license under a third party's intellectual property rights is required to exercise the rights granted by such Contributor under Sections 2.1 or 2.2, Contributor must include a text file with the Source Code distribution titled "LEGAL" which describes the claim and the party making the claim in sufficient detail that a recipient will know whom to contact. If Contributor obtains such knowledge after the Modification is made available as described in Section 3.2, Contributor shall promptly modify the LEGAL file in all copies Contributor makes available thereafter and shall take other steps (such as notifying appropriate mailing lists or newsgroups) reasonably calculated to inform those who received the Covered Code that new knowledge has been obtained.
+ .
+ (b) Contributor APIs
+ .
+ If Contributor's Modifications include an application programming interface and Contributor has knowledge of patent licenses which are reasonably necessary to implement that API, Contributor must also include this information in the LEGAL file.
+ .
+ (c) Representations.
+ .
+ Contributor represents that, except as disclosed pursuant to Section 3.4 (a) above, Contributor believes that Contributor's Modifications are Contributor's original creation(s) and/or Contributor has sufficient rights to grant the rights conveyed by this License.
+ .
+ 3.5. Required Notices.
+ .
+ You must duplicate the notice in Exhibit A in each file of the Source Code. If it is not possible to put such notice in a particular Source Code file due to its structure, then You must include such notice in a location (such as a relevant directory) where a user would be likely to look for such a notice. If You created one or more Modification(s) You may add your name as a Contributor to the notice described in Exhibit A. You must also duplicate this License in any documentation for the Source Code where You describe recipients' rights or ownership rights relating to Covered Code. You may choose to offer, and to charge a fee for, warranty, support, indemnity or liability obligations to one or more recipients of Covered Code. However, You may do so only on Your own behalf, and not on behalf of the Initial Developer or any Contributor. You must make it absolutely clear than any such warranty, support, indemnity or liability obligation is offered by You alone, and You hereby agree to indemnify the Initial Developer and every Contributor for any liability incurred by the Initial Developer or such Contributor as a result of warranty, support, indemnity or liability terms You offer.
+ .
+ 3.6. Distribution of Executable Versions.
+ .
+ You may distribute Covered Code in Executable form only if the requirements of Sections 3.1, 3.2, 3.3, 3.4 and 3.5 have been met for that Covered Code, and if You include a notice stating that the Source Code version of the Covered Code is available under the terms of this License, including a description of how and where You have fulfilled the obligations of Section 3.2. The notice must be conspicuously included in any notice in an Executable version, related documentation or collateral in which You describe recipients' rights relating to the Covered Code. You may distribute the Executable version of Covered Code or ownership rights under a license of Your choice, which may contain terms different from this License, provided that You are in compliance with the terms of this License and that the license for the Executable version does not attempt to limit or alter the recipient's rights in the Source Code version from the rights set forth in this License. If You distribute the Executable version under a different license You must make it absolutely clear that any terms which differ from this License are offered by You alone, not by the Initial Developer or any Contributor. You hereby agree to indemnify the Initial Developer and every Contributor for any liability incurred by the Initial Developer or such Contributor as a result of any such terms You offer.
+ .
+ 3.7. Larger Works.
+ .
+ You may create a Larger Work by combining Covered Code with other code not governed by the terms of this License and distribute the Larger Work as a single product. In such a case, You must make sure the requirements of this License are fulfilled for the Covered Code.
+ .
+ 4. Inability to Comply Due to Statute or Regulation.
+ .
+ If it is impossible for You to comply with any of the terms of this License with respect to some or all of the Covered Code due to statute, judicial order, or regulation then You must: (a) comply with the terms of this License to the maximum extent possible; and (b) describe the limitations and the code they affect. Such description must be included in the LEGAL file described in Section 3.4 and must be included with all distributions of the Source Code. Except to the extent prohibited by statute or regulation, such description must be sufficiently detailed for a recipient of ordinary skill to be able to understand it.
+ .
+ 5. Application of this License.
+ .
+ This License applies to code to which the Initial Developer has attached the notice in Exhibit A and to related Covered Code.
+ .
+ 6. Versions of the License.
+ .
+ 6.1. New Versions
+ .
+ Netscape Communications Corporation ("Netscape") may publish revised and/or new versions of the License from time to time. Each version will be given a distinguishing version number.
+ .
+ 6.2. Effect of New Versions
+ .
+ Once Covered Code has been published under a particular version of the License, You may always continue to use it under the terms of that version. You may also choose to use such Covered Code under the terms of any subsequent version of the License published by Netscape. No one other than Netscape has the right to modify the terms applicable to Covered Code created under this License.
+ .
+ 6.3. Derivative Works
+ .
+ If You create or use a modified version of this License (which you may only do in order to apply it to code which is not already Covered Code governed by this License), You must (a) rename Your license so that the phrases "Mozilla", "MOZILLAPL", "MOZPL", "Netscape", "MPL", "NPL" or any confusingly similar phrase do not appear in your license (except to note that your license differs from this License) and (b) otherwise make it clear that Your version of the license contains terms which differ from the Mozilla Public License and Netscape Public License. (Filling in the name of the Initial Developer, Original Code or Contributor in the notice described in Exhibit A shall not of themselves be deemed to be modifications of this License.)
+ .
+ 7. DISCLAIMER OF WARRANTY
+ .
+ COVERED CODE IS PROVIDED UNDER THIS LICENSE ON AN "AS IS" BASIS, WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, WITHOUT LIMITATION, WARRANTIES THAT THE COVERED CODE IS FREE OF DEFECTS, MERCHANTABLE, FIT FOR A PARTICULAR PURPOSE OR NON-INFRINGING. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE COVERED CODE IS WITH YOU. SHOULD ANY COVERED CODE PROVE DEFECTIVE IN ANY RESPECT, YOU (NOT THE INITIAL DEVELOPER OR ANY OTHER CONTRIBUTOR) ASSUME THE COST OF ANY NECESSARY SERVICING, REPAIR OR CORRECTION. THIS DISCLAIMER OF WARRANTY CONSTITUTES AN ESSENTIAL PART OF THIS LICENSE. NO USE OF ANY COVERED CODE IS AUTHORIZED HEREUNDER EXCEPT UNDER THIS DISCLAIMER.
+ .
+ 8. Termination
+ .
+ 8.1. This License and the rights granted hereunder will terminate automatically if You fail to comply with terms herein and fail to cure such breach within 30 days of becoming aware of the breach. All sublicenses to the Covered Code which are properly granted shall survive any termination of this License. Provisions which, by their nature, must remain in effect beyond the termination of this License shall survive.
+ .
+ 8.2. If You initiate litigation by asserting a patent infringement claim (excluding declatory judgment actions) against Initial Developer or a Contributor (the Initial Developer or Contributor against whom You file such action is referred to as "Participant") alleging that:
+ .
+ such Participant's Contributor Version directly or indirectly infringes any patent, then any and all rights granted by such Participant to You under Sections 2.1 and/or 2.2 of this License shall, upon 60 days notice from Participant terminate prospectively, unless if within 60 days after receipt of notice You either: (i) agree in writing to pay Participant a mutually agreeable reasonable royalty for Your past and future use of Modifications made by such Participant, or (ii) withdraw Your litigation claim with respect to the Contributor Version against such Participant. If within 60 days of notice, a reasonable royalty and payment arrangement are not mutually agreed upon in writing by the parties or the litigation claim is not withdrawn, the rights granted by Participant to You under Sections 2.1 and/or 2.2 automatically terminate at the expiration of the 60 day notice period specified above.
+ any software, hardware, or device, other than such Participant's Contributor Version, directly or indirectly infringes any patent, then any rights granted to You by such Participant under Sections 2.1(b) and 2.2(b) are revoked effective as of the date You first made, used, sold, distributed, or had made, Modifications made by that Participant.
+ 8.3. If You assert a patent infringement claim against Participant alleging that such Participant's Contributor Version directly or indirectly infringes any patent where such claim is resolved (such as by license or settlement) prior to the initiation of patent infringement litigation, then the reasonable value of the licenses granted by such Participant under Sections 2.1 or 2.2 shall be taken into account in determining the amount or value of any payment or license.
+ .
+ 8.4. In the event of termination under Sections 8.1 or 8.2 above, all end user license agreements (excluding distributors and resellers) which have been validly granted by You or any distributor hereunder prior to termination shall survive termination.
+ .
+ 9. LIMITATION OF LIABILITY
+ .
+ UNDER NO CIRCUMSTANCES AND UNDER NO LEGAL THEORY, WHETHER TORT (INCLUDING NEGLIGENCE), CONTRACT, OR OTHERWISE, SHALL YOU, THE INITIAL DEVELOPER, ANY OTHER CONTRIBUTOR, OR ANY DISTRIBUTOR OF COVERED CODE, OR ANY SUPPLIER OF ANY OF SUCH PARTIES, BE LIABLE TO ANY PERSON FOR ANY INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES OF ANY CHARACTER INCLUDING, WITHOUT LIMITATION, DAMAGES FOR LOSS OF GOODWILL, WORK STOPPAGE, COMPUTER FAILURE OR MALFUNCTION, OR ANY AND ALL OTHER COMMERCIAL DAMAGES OR LOSSES, EVEN IF SUCH PARTY SHALL HAVE BEEN INFORMED OF THE POSSIBILITY OF SUCH DAMAGES. THIS LIMITATION OF LIABILITY SHALL NOT APPLY TO LIABILITY FOR DEATH OR PERSONAL INJURY RESULTING FROM SUCH PARTY'S NEGLIGENCE TO THE EXTENT APPLICABLE LAW PROHIBITS SUCH LIMITATION. SOME JURISDICTIONS DO NOT ALLOW THE EXCLUSION OR LIMITATION OF INCIDENTAL OR CONSEQUENTIAL DAMAGES, SO THIS EXCLUSION AND LIMITATION MAY NOT APPLY TO YOU.
+ .
+ 10. U.S. government end users
+ .
+ The Covered Code is a "commercial item," as that term is defined in 48 C.F.R. 2.101 (Oct. 1995), consisting of "commercial computer software" and "commercial computer software documentation," as such terms are used in 48 C.F.R. 12.212 (Sept. 1995). Consistent with 48 C.F.R. 12.212 and 48 C.F.R. 227.7202-1 through 227.7202-4 (June 1995), all U.S. Government End Users acquire Covered Code with only those rights set forth herein.
+ .
+ 11. Miscellaneous
+ .
+ This License represents the complete agreement concerning subject matter hereof. If any provision of this License is held to be unenforceable, such provision shall be reformed only to the extent necessary to make it enforceable. This License shall be governed by California law provisions (except to the extent applicable law, if any, provides otherwise), excluding its conflict-of-law provisions. With respect to disputes in which at least one party is a citizen of, or an entity chartered or registered to do business in the United States of America, any litigation relating to this License shall be subject to the jurisdiction of the Federal Courts of the Northern District of California, with venue lying in Santa Clara County, California, with the losing party responsible for costs, including without limitation, court costs and reasonable attorneys' fees and expenses. The application of the United Nations Convention on Contracts for the International Sale of Goods is expressly excluded. Any law or regulation which provides that the language of a contract shall be construed against the drafter shall not apply to this License.
+ .
+ 12. Responsibility for claims
+ .
+ As between Initial Developer and the Contributors, each party is responsible for claims and damages arising, directly or indirectly, out of its utilization of rights under this License and You agree to work with Initial Developer and Contributors to distribute such responsibility on an equitable basis. Nothing herein is intended or shall be deemed to constitute any admission of liability.
+ .
+ Includes Protocol Buffers licensed under terms:
+ Redistribution and use in source and binary forms, with or without modification, are
+ permitted provided that the following conditions are met:
+ .
+ 1. Redistributions of source code must retain the above copyright notice, this list of
+ conditions and the following disclaimer.
+ .
+ 2. Redistributions in binary form must reproduce the above copyright notice, this list
+ of conditions and the following disclaimer in the documentation and/or other materials
+ provided with the distribution.
+ .
+ THIS SOFTWARE IS PROVIDED BY <COPYRIGHT HOLDER> ``AS IS'' AND ANY EXPRESS OR IMPLIED
+ WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND
+ FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL <COPYRIGHT HOLDER> OR
+ CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+ CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+ SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
+ ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
+ NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
+ ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ .
+ The views and conclusions contained in the software and documentation are those of the
+ authors and should not be interpreted as representing official policies, either expressed
+ or implied, of <copyright holder>
+
Modified: packages-metadata/b/biosig4c++.upstream
===================================================================
--- packages-metadata/b/biosig4c++.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/b/biosig4c++.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -1,5 +1,5 @@
Reference:
- Author: Alois Schlögl, Clemens Brunner
+ Author: Alois Schlögl and Clemens Brunner
Title: "BioSig: A Free and Open Source Software Library for BCI Research"
Journal: Computer
Year: 2008
Modified: packages-metadata/b/bowtie2.copyright
===================================================================
--- packages-metadata/b/bowtie2.copyright 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/b/bowtie2.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -1,4 +1,4 @@
-Format: http://dep.debian.net/deps/dep5/
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: Bowtie2
Upstream-Contact: Ben Langmead <blangmea at jhsph.edu>
Source: http://sourceforge.net/projects/bowtie2-bio/files/bowtie2/
Modified: packages-metadata/c/clonalframe.upstream
===================================================================
--- packages-metadata/c/clonalframe.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/c/clonalframe.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -1,12 +1,14 @@
Contact: Xavier Didelot <xavier.didelot at gmail.com>
-Reference-DOI: 10.1534/genetics.106.063305
Homepage: http://www.xavierdidelot.xtreemhost.com/clonalframe.htm
Name: ClonalFrame
Reference:
- author: Xavier Didelot, Daniel Falush
+ author: Xavier Didelot and Daniel Falush
title: Inference of Bacterial Microevolution Using Multilocus Sequence Data
journal: Genetics Advance
volume: 175
pages: 1251-1266
year: 2006
+ DOI: 10.1534/genetics.106.063305
+ PMID: 17151252
URL: http://www.genetics.org/cgi/content/abstract/175/3/1251
+ eprint: http://www.genetics.org/content/175/3/1251.full.pdf+html
Modified: packages-metadata/c/clustalw.upstream
===================================================================
--- packages-metadata/c/clustalw.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/c/clustalw.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -2,7 +2,7 @@
Contact: clustalw at ucd.ie
Homepage: http://www.clustal.org/
Reference:
- author: Larkin, M.A. and Blackshields, G. and Brown, N.P. and Chenna, R. and McGettigan, P.A. and McWilliam, H. and Valentin, F. and Wallace, I.M. and Wilm, A. and Lopez, R. and Thompson, J.D. and Gibson, T.J. and Higgins, D.G.
+ author: Larkin, M. A. and Blackshields, G. and Brown, N. P. and Chenna, R. and McGettigan, P. A. and McWilliam, H. and Valentin, F. and Wallace, I.M. and Wilm, A. and Lopez, R. and Thompson, J. D. and Gibson, T. J. and Higgins, D. G.
title: Clustal W and Clustal X version 2.0
journal: Bioinformatics
volume: 23
Added: packages-metadata/c/clusterssh.copyright
===================================================================
--- packages-metadata/c/clusterssh.copyright (rev 0)
+++ packages-metadata/c/clusterssh.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,29 @@
+Upstream source location: http://sourceforge.net/projects/clusterssh/
+
+Files: *
+Copyright: © (2001-2010) Duncan Ferguson <duncan_ferguson at users.sourceforge.net>
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify it
+ under the terms of the GNU General Public License as published by the
+ Free Software Foundation; either version 2 of the License, or any later
+ version.
+
+On Debian systems, the complete text of the GNU General Public License
+version 2 can be found in file `/usr/share/common-licenses/GPL-2'.
+
+Files: bin/*
+Copyright: © (2006) JT Moree <moreejt at pcxperience.com>
+License: GPL-2
+
+Files: lib/
+Copyright: © (2001-2010) Duncan Ferguson <duncan_ferguson at users.sourceforge.net>
+License: GPL-1+ | Artistic
+
+Perl is licensed under both the GPL and the Artistic license. (Please
+refer to '/usr/share/doc/perl/copyright'.)
+
+Files: debian/*
+Copyright:
+ © (2004-2010) tony mancill <tmancill at debian.org>
+ © (2004-2010) gregor herrmann <gregoa at debian.org>
+License: GPL-2+
Added: packages-metadata/c/conky-all.copyright
===================================================================
--- packages-metadata/c/conky-all.copyright (rev 0)
+++ packages-metadata/c/conky-all.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,129 @@
+Format: http://anonscm.debian.org/viewvc/dep/web/deps/dep5.mdwn?revision=174
+Upstream-Name: conky
+Upstream-Contact: Brenden Matthews <brenden at rty.ca>
+Source: http://sourceforge.net/projects/conky/files/
+
+Files: autogen.sh src/*
+Copyright: 2005-2009 Brenden Matthews, Philip Kovacs, et. al. (see AUTHORS)
+ 2004 Hannu Saransaari, Lauri Hakkarainen
+ 2005 Adi Zaimi, Dan Piponi <dan at tanelorn.demon.co.uk>
+ 2007 Toni Spets
+ 2008 Markus Meissner
+ 2008 Asbjørn Zweidorff Kjær
+ 2008 Henri Häkkinen
+ 2008 Phil Sutter <phil at nwl.cc>
+ 2009 Yeon-Hyeong Yang <lbird94 at gmail.com>
+License: GPL-3.0+
+
+Files: src/smapi.c src/temphelper.c
+Copyright: 2007 Phil Sutter <Phil at nwl.cc>
+License: GPL-2.0+
+
+Files: src/libtcp-portmon.c src/audacious.c src/timed_thread.c src/apcupsd.c
+Copyright: 2005-2007 Philip Kovacs <pkovacs at users.sourceforge.net>
+ 2009 Jaromir Smrcek <jaromir.smrcek at zoner.com>
+License: LGPL-2.1+
+
+Files: src/libmpdclient.c
+Copyright: 2003-2006 Warren Dukes <warren.dukes at gmail.com>
+License: BSD-3-clause
+
+Files: src/prss.c
+Copyright: 2007 Mikko Sysikaski <mikko.sysikaski at gmail.com>
+License: ISC
+
+Files: debian/*
+Copyright: 2005 Jason Tan <jtan325 at gmail.com>
+Copyright: 2006 Steve Langasek, Laszlo Boszormenyi, Bartosz Fenski
+Copyright: 2007-2008 Kapil Hari Paranjape <kapil at debian.org>
+Copyright: 2009-2010 Cesare Tirabassi <norsetto at ubuntu.com>
+Copyright: 2011 Vincent Cheng <Vincentc1208 at gmail.com>
+License: GPL-3.0+
+
+License: GPL-3.0+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 3 can be found in "/usr/share/common-licenses/GPL-3".
+
+License: GPL-2.0+
+ This package is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
+
+License: BSD-3-clause
+ - Redistributions of source code must retain the above copyright
+ notice, this list of conditions and the following disclaimer.
+ .
+ - Redistributions in binary form must reproduce the above copyright
+ notice, this list of conditions and the following disclaimer in the
+ documentation and/or other materials provided with the distribution.
+ .
+ - Neither the name of the Music Player Daemon nor the names of its
+ contributors may be used to endorse or promote products derived from
+ this software without specific prior written permission.
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
+ ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
+ LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
+ A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE FOUNDATION OR
+ CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
+ EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
+ PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
+ PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
+ LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
+ NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+License: LGPL-2.1+
+ This package is free software; you can redistribute it and/or
+ modify it under the terms of the GNU Lesser General Public
+ License as published by the Free Software Foundation; either
+ version 2.1 of the License, or (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ Lesser General Public License for more details.
+ .
+ You should have received a copy of the GNU Lesser General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ .
+ On Debian systems, the complete text of the GNU Lesser General
+ Public License can be found in "/usr/share/common-licenses/LGPL-2.1".
+
+License: ISC
+ Permission to use, copy, modify, and distribute this software for any
+ purpose with or without fee is hereby granted, provided that the above
+ copyright notice and this permission notice appear in all copies.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES
+ WITH REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF
+ MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR
+ ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES
+ WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN
+ ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF
+ OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
Added: packages-metadata/c/conky.copyright
===================================================================
--- packages-metadata/c/conky.copyright (rev 0)
+++ packages-metadata/c/conky.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,129 @@
+Format: http://anonscm.debian.org/viewvc/dep/web/deps/dep5.mdwn?revision=174
+Upstream-Name: conky
+Upstream-Contact: Brenden Matthews <brenden at rty.ca>
+Source: http://sourceforge.net/projects/conky/files/
+
+Files: autogen.sh src/*
+Copyright: 2005-2009 Brenden Matthews, Philip Kovacs, et. al. (see AUTHORS)
+ 2004 Hannu Saransaari, Lauri Hakkarainen
+ 2005 Adi Zaimi, Dan Piponi <dan at tanelorn.demon.co.uk>
+ 2007 Toni Spets
+ 2008 Markus Meissner
+ 2008 Asbjørn Zweidorff Kjær
+ 2008 Henri Häkkinen
+ 2008 Phil Sutter <phil at nwl.cc>
+ 2009 Yeon-Hyeong Yang <lbird94 at gmail.com>
+License: GPL-3.0+
+
+Files: src/smapi.c src/temphelper.c
+Copyright: 2007 Phil Sutter <Phil at nwl.cc>
+License: GPL-2.0+
+
+Files: src/libtcp-portmon.c src/audacious.c src/timed_thread.c src/apcupsd.c
+Copyright: 2005-2007 Philip Kovacs <pkovacs at users.sourceforge.net>
+ 2009 Jaromir Smrcek <jaromir.smrcek at zoner.com>
+License: LGPL-2.1+
+
+Files: src/libmpdclient.c
+Copyright: 2003-2006 Warren Dukes <warren.dukes at gmail.com>
+License: BSD-3-clause
+
+Files: src/prss.c
+Copyright: 2007 Mikko Sysikaski <mikko.sysikaski at gmail.com>
+License: ISC
+
+Files: debian/*
+Copyright: 2005 Jason Tan <jtan325 at gmail.com>
+Copyright: 2006 Steve Langasek, Laszlo Boszormenyi, Bartosz Fenski
+Copyright: 2007-2008 Kapil Hari Paranjape <kapil at debian.org>
+Copyright: 2009-2010 Cesare Tirabassi <norsetto at ubuntu.com>
+Copyright: 2011 Vincent Cheng <Vincentc1208 at gmail.com>
+License: GPL-3.0+
+
+License: GPL-3.0+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 3 can be found in "/usr/share/common-licenses/GPL-3".
+
+License: GPL-2.0+
+ This package is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
+
+License: BSD-3-clause
+ - Redistributions of source code must retain the above copyright
+ notice, this list of conditions and the following disclaimer.
+ .
+ - Redistributions in binary form must reproduce the above copyright
+ notice, this list of conditions and the following disclaimer in the
+ documentation and/or other materials provided with the distribution.
+ .
+ - Neither the name of the Music Player Daemon nor the names of its
+ contributors may be used to endorse or promote products derived from
+ this software without specific prior written permission.
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
+ ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
+ LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
+ A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE FOUNDATION OR
+ CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
+ EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
+ PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
+ PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
+ LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
+ NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+License: LGPL-2.1+
+ This package is free software; you can redistribute it and/or
+ modify it under the terms of the GNU Lesser General Public
+ License as published by the Free Software Foundation; either
+ version 2.1 of the License, or (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ Lesser General Public License for more details.
+ .
+ You should have received a copy of the GNU Lesser General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ .
+ On Debian systems, the complete text of the GNU Lesser General
+ Public License can be found in "/usr/share/common-licenses/LGPL-2.1".
+
+License: ISC
+ Permission to use, copy, modify, and distribute this software for any
+ purpose with or without fee is hereby granted, provided that the above
+ copyright notice and this permission notice appear in all copies.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES
+ WITH REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF
+ MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR
+ ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES
+ WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN
+ ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF
+ OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
Modified: packages-metadata/c/cufflinks.copyright
===================================================================
--- packages-metadata/c/cufflinks.copyright 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/c/cufflinks.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -1,6 +1,17 @@
-Format: http://dep.debian.net/deps/dep5
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Contact: tophat.cufflinks at gmail.com.
Source: http://cufflinks.cbcb.umd.edu/downloads/cufflinks-1.3.0.tar.gz
-Upstream-Contact: tophat.cufflinks at gmail.com.
+License: non-free
+ Most of the source code of Cufflinks is under the Boost Software License
+ version 1.0, with the exception of M4 macros under permissive licenses, and
+ ‘locfit’, which contains an unfortunate non-free clause restricting benchmarks.
+ .
+ After compilation (in May 2012), Cufflinks was linked to Boost (BSL-1.0), the
+ GNU libc (mostly LGPL-2.1+), the GNU libgcc and libstdc++ (GPL-3+ with version
+ 3.1 of the GCC Runtime Library Exception), and the zlib (permissive license).
+ .
+ The python script cuffmerge is also under the BSL-1.0, and can be executed
+ with Python without third-party libraries.
Disclamer: This package is not part of the Debian operating system.
The cufflinks source and binary Debian packages are part of the “non-free” area
in our archive. The packages in this area are not part of the Debian system,
@@ -28,12 +39,11 @@
Files: ax_boost_base.m4 ax_boost_thread.m4
Copyright: © 2008,2009 Thomas Porschberg <thomas at randspringer.de>
© 2009 Michael Tindal
+License: GAP
Source: http://autoconf-archive.cryp.to/
-License: GAP
Files: ax_check_zlib.m4
Copyright: © 2008 Loic Dachary <loic at senga.org>
-Source: http://www.gnu.org/software/autoconf-archive/ax_check_zlib.html
License: GPL-2+_with_Autoconf_exception
This program is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
@@ -62,9 +72,9 @@
exception to the GPL to apply to your modified version as well.
Comment: On Debian systems, the full text of the GNU General Public
license version 2 can be consulted in ‘/usr/share/common-licenses/GPL-2’.
+Source: http://www.gnu.org/software/autoconf-archive/ax_check_zlib.html
Files: src/lemon/*
-Source: http://lemon.cs.elte.hu/trac/lemon
Copyright: © 2003-2008 Egervary Jeno Kombinatorikus Optimalizalasi Kutatocsoport (Egervary Research Group on Combinatorial Optimization, EGRES)
© 2003 The Trustees of Indiana University
© Jeremy Siek 2000
@@ -86,11 +96,11 @@
.
The license file at http://lemon.cs.elte.hu/trac/lemon/browser indicates
the Boost Software License, Version 1.0.
+Source: http://lemon.cs.elte.hu/trac/lemon
Files: src/locfit/*
Copyright: © 1996-2001 Lucent Technologies, Bell Laboratories.
© 1996-2001 Catherine Loader.
-Source: http://stat.bell-labs.com/project/locfit
License: Locfit
ABOUT ALGORITHMS:
The Locfit implementation has been designed largely from the point
@@ -130,6 +140,7 @@
Comment: the files contain “See README file for details.” and the license
displayed above is from the README file of the locfit source available at
http://stat.bell-labs.com/project/locfit/dist/locfit.tgz
+Source: http://stat.bell-labs.com/project/locfit
Files: debian/*
Copyright: 2011 Alex Mestiashvili <alex at biotec.tu-dresden.de>
@@ -166,3 +177,4 @@
and this notice are preserved.
Comment: GAP stands for GNU All Permissive, see:
http://www.gnu.org/s/hello/manual/texinfo/All_002dpermissive-Copying-License.html
+
Modified: packages-metadata/c/cufflinks.upstream
===================================================================
--- packages-metadata/c/cufflinks.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/c/cufflinks.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -2,9 +2,25 @@
Homepage: http://cufflinks.cbcb.umd.edu/
Name: Cufflinks
Reference:
- Author: Trapnell C, Williams BA, Pertea G, Mortazavi AM, Kwan G, van Baren MJ, Salzberg SL, Wold B, Pachter L.
+- Author: Cole Trapnell and Brian A Williams and Geo Pertea and Ali Mortazavi and Gordon Kwan and Marijke J van Baren and Steven L Salzberg and Barbara J Wold and Lior Pachter
Title: Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Journal: Nature Biotechnology
DOI: doi:10.1038/nbt.1621
URL: http://www.nature.com/nbt/journal/v28/n5/full/nbt.1621.html
Year: 2010
+ PMID: 20436464
+ Pages: 511-515
+ Volume: 28
+ Number: 5
+ Type: article
+- Author: "Cole Trapnell and Adam Roberts and Loyal Goff and Geo Pertea and Daehwan Kim and David R Kelley and Harold Pimentel and Steven L Salzberg and John L Rinn and Lior Pachter"
+ Title: Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks.
+ Journal: Nat. Protocols
+ Year: 2012
+ DOI: 10.1038/nprot.2012.016
+ URL: http://www.nature.com/nprot/journal/v7/n3/full/nprot.2012.016.html
+ Pages: 562-578
+ Volume: 7
+ Number: 8
+ PMID: 22383036
+ Type: article
Added: packages-metadata/e/edfbrowser.upstream
===================================================================
--- packages-metadata/e/edfbrowser.upstream (rev 0)
+++ packages-metadata/e/edfbrowser.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,14 @@
+Reference:
+ Comment: >
+ This is actually no paper *about* edfbrowser but a paper where
+ edfbrowser was used - but the author of the software has given
+ this as a reference publication
+ Author: Martin Wolgast and Lars-Gunnar Lundh and Gardar Viborg
+ Title: "Cognitive reappraisal and acceptance: An experimental comparison of two emotion regulation strategies"
+ Journal: Behaviour Research and Therapy
+ Year: 2011
+ Volume: 49
+ Number: 12
+ Pages: 858–866
+ DOI: 10.1016/j.brat.2011.09.011
+ URL: http://www.sciencedirect.com/science/article/pii/S0005796711002233
Added: packages-metadata/f/font-manager.copyright
===================================================================
--- packages-metadata/f/font-manager.copyright (rev 0)
+++ packages-metadata/f/font-manager.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,29 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: Font Manager
+Upstream-Contact: Jerry Casiano <jerrycasiano at gmail.com>
+Source: http://code.google.com/p/font-manager/downloads/list
+
+Files: *
+Copyright: 2009,2010 Jerry Casiano <jerrycasiano at gmail.com>
+License: GPL-3+
+
+Files: debian/*
+Copyright: 2010-2012 Alessio Treglia <alessio at debian.org>
+License: GPL-3+
+
+License: GPL-3+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+Comment:
+ On Debian systems, the complete text of the GNU General Public
+ License version 3 can be found in `/usr/share/common-licenses/GPL-3'.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
Added: packages-metadata/g/ganeti-instance-debootstrap.copyright
===================================================================
--- packages-metadata/g/ganeti-instance-debootstrap.copyright (rev 0)
+++ packages-metadata/g/ganeti-instance-debootstrap.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,45 @@
+This package was debianized by:
+
+ Iustin Pop <iusty at k1024.org> on Tue, 19 Feb 2008 19:53:48 +0100
+
+It was then taken over for official Debian maintenance by the Debian Ganeti
+Team.
+
+It was downloaded from:
+
+ http://code.google.com/p/ganeti/
+
+Upstream Author:
+
+ Google Inc
+
+Copyright:
+
+ Copyright (C) 2006, 2007, 2008, 2009 Google Inc.
+
+License:
+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ General Public License for more details.
+
+ You should have received a copy of the GNU General Public License
+ along with this program; if not, write to the Free Software
+ Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
+ 02110-1301, USA.
+
+On Debian systems, the complete text of the GNU General
+Public License version 2 can be found in `/usr/share/common-licenses/GPL-2'.
+
+The Debian packaging is:
+
+ Copyright (C) 2008, 2009 Debian Ganeti Team
+ <pkg-ganeti at lists.alioth.debian.org>
+
+and is licensed under the GPL, see `/usr/share/common-licenses/GPL'.
Added: packages-metadata/g/gitstats.copyright
===================================================================
--- packages-metadata/g/gitstats.copyright (rev 0)
+++ packages-metadata/g/gitstats.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,33 @@
+Name: gitstats
+Source: git://repo.or.cz/gitstats.git
+
+Files: *
+Copyright: Copyright (c) 2007-2009 Heikki Hokkanen <hoxu at users.sf.net>
+License: GPL-2 | GPL-3
+ On Debian systems the full text of the GNU General Public License
+ version 2 can be found in the `/usr/share/common-licenses/GPL-2'
+ file.
+
+Files: sortable.js
+Copyright: Copyright (c) 1997-2007 Stuart Langridge, Joost de Valk
+License: MIT
+ Permission is hereby granted, free of charge, to any person obtaining
+ a copy of this software and associated documentation files (the
+ "Software"), to deal in the Software without restriction, including
+ without limitation the rights to use, copy, modify, merge, publish,
+ distribute, sublicense, and/or sell copies of the Software, and to
+ permit persons to whom the Software is furnished to do so, subject to
+ the following conditions:
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
+ BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
+ ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
+ CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ SOFTWARE.
+
+Files: debian/*
+Copyright: 2009 by Vincent Fourmond <fourmond at debian.org>
+License: GPL2+
Added: packages-metadata/h/html5lib.copyright
===================================================================
--- packages-metadata/h/html5lib.copyright (rev 0)
+++ packages-metadata/h/html5lib.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,67 @@
+This package was debianized by Bernd Zeimetz <bernd at bzed.de> on
+Sun, 11 Mar 2007 21:29:42 +0100
+
+It was downloaded from http://code.google.com/p/html5lib/
+
+Copyright (c) 2006 The Authors
+Authors:
+ James Graham - jg307 at cam.ac.uk
+ Anne van Kesteren - annevankesteren at gmail.com
+ Lachlan Hunt - lachlan.hunt at lachy.id.au
+ Matt McDonald - kanashii at kanashii.ca
+ Sam Ruby - rubys at intertwingly.net
+ Ian Hickson (Google) - ian at hixie.ch
+ Thomas Broyer - t.broyer at gmail.com
+
+License:
+
+Permission is hereby granted, free of charge, to any person obtaining a copy of
+this software and associated documentation files (the "Software"), to deal in
+the Software without restriction, including without limitation the rights to
+use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies
+of the Software, and to permit persons to whom the Software is furnished to do
+so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
+The Debian packaging is Copyright (C) 2007-2009,
+Bernd Zeimetz <bzed at debian.org> and is licensed under the same license
+as html5lib, see above.
+
+
+Files with different copyrights/licenses:
+
+ * src/html5lib/filters/{iso639codes,rfc2046,rfc3987}.py
+
+ adapted from feedvalidator, original copyright license is
+
+ Copyright (c) 2002-2006, Sam Ruby, Mark Pilgrim, Joseph Walton, and Phil Ringnalda
+
+ Permission is hereby granted, free of charge, to any person obtaining a copy
+ of this software and associated documentation files (the "Software"), to deal
+ in the Software without restriction, including without limitation the rights
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+
+ The above copyright notice and this permission notice shall be included in all
+ copies or substantial portions of the Software.
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ SOFTWARE.
+
+
Added: packages-metadata/j/jxgrabkey.copyright
===================================================================
--- packages-metadata/j/jxgrabkey.copyright (rev 0)
+++ packages-metadata/j/jxgrabkey.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,39 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: JXGrabKey
+Source: http://jxgrabkey.sourceforge.net/
+
+Files: *
+Copyright: 2008-2010 Edwin Stang <edwinstang at gmail.com>
+License: LGPL-3+
+
+Files: debian/*
+Copyright: 2010 Gilles Filippini <pini at debian.org>
+License: GPL-3+
+
+License: GPL-3+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ On Debian systems the full text of the GNU General Public License
+ version 3 can be found in the `/usr/share/common-licenses/GPL-3' file.
+
+License: LGPL-3+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Lesser General Public License as published
+ by the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU Lesser General Public License for more details.
+ .
+ On Debian systems the full text of the GNU Lesser General Public License
+ version 3 can be found in the `/usr/share/common-licenses/LGPL-3' file.
Added: packages-metadata/k/khronos-opencl-headers.copyright
===================================================================
--- packages-metadata/k/khronos-opencl-headers.copyright (rev 0)
+++ packages-metadata/k/khronos-opencl-headers.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,52 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: OpenCL headers
+Upstream-Contact: The Khronos Group Inc. <http://www.khronos.org/>
+Source: http://www.khronos.org/registry/cl/
+Disclaimer:
+ This package is not part of the GNU/Linux Debian distribution. It is
+ provided in the contrib archive area as a convenience to Debian users.
+ The headers provided by this package are free, but to make use of these
+ files a library that implements OpenCL is needed, too. These
+ implementations (e.g. from NVIDIA or AMD) are only distributed under
+ non-free licenses and without source code.
+
+Files: *
+Copyright: (c) 2008-2012 The Khronos Group Inc.
+License: other-MIT-style-KHRONOS
+ Permission is hereby granted, free of charge, to any person obtaining a
+ copy of this software and/or associated documentation files (the
+ "Materials"), to deal in the Materials without restriction, including
+ without limitation the rights to use, copy, modify, merge, publish,
+ distribute, sublicense, and/or sell copies of the Materials, and to
+ permit persons to whom the Materials are furnished to do so, subject to
+ the following conditions:
+ .
+ The above copyright notice and this permission notice shall be included
+ in all copies or substantial portions of the Materials.
+ .
+ THE MATERIALS ARE PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+ IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
+ CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
+ TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
+ MATERIALS OR THE USE OR OTHER DEALINGS IN THE MATERIALS.
+
+Files: debian/*
+Copyright: © 2010-2012 Andreas Beckmann <debian at abeckmann.de>
+License: GPL-3+
+ This program is free software: you can redistribute it and/or modify it
+ under the terms of the GNU General Public License as published by the
+ Free Software Foundation, either version 3 of the License, or (at your
+ option) any later version.
+ .
+ This program is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
+ Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License along
+ with this program. If not, see <http://www.gnu.org/licenses/>.
+ .
+ The GNU General Public License version 3 may be found on Debian systems
+ in /usr/share/common-licenses/GPL-3.
Modified: packages-metadata/l/libsbml.upstream
===================================================================
--- packages-metadata/l/libsbml.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/l/libsbml.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -1,7 +1,7 @@
Contact: sbml-team at caltech.edu
Name: libSBML
Reference:
- Author: Bornstein, B. J. and Keating, S. M. and Jouraku, A. and Hucka M.
+ Author: Benjamin J Bornstein and Sarah M Keating and Akiya Jouraku and Michael Hucka
Title: "LibSBML: An API Library for SBML"
Journal: Bioinformatics
Volume: 24
Modified: packages-metadata/m/mira.upstream
===================================================================
--- packages-metadata/m/mira.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/m/mira.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -2,7 +2,7 @@
Homepage: http://www.chevreux.org/projects_mira.html
Homepage: http://sourceforge.net/apps/trac/mira-assembler
Reference:
- author: Chevreux, Bastien and Pfisterer, Thomas and Drescher, Bernd and Driesel, Albert J. and Müller, Werner E.G. and Wetter, Thomas and Suhai, Sándor
+ author: Chevreux, Bastien and Pfisterer, Thomas and Drescher, Bernd and Driesel, Albert J. and Müller, Werner E. G. and Wetter, Thomas and Suhai, Sándor
title: Using the miraEST Assembler for Reliable and Automated mRNA Transcript Assembly and SNP Detection in Sequenced ESTs
journal: Genome Research
volume: 14
Added: packages-metadata/m/mobyle.upstream
===================================================================
--- packages-metadata/m/mobyle.upstream (rev 0)
+++ packages-metadata/m/mobyle.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,12 @@
+Reference:
+ Author: Bertrand Neron and Herve Menager and Corinne Maufrais and Nicolas Joly and Julien Maupetit and Sebastien Letort and Sebastien Carrere and Pierre Tuffery and Catherine Letondal
+ Title: "Mobyle: a new full web bioinformatics framework"
+ Journal: Bioinformatics
+ Year: 2009
+ Volume: 25
+ Number: 22
+ Pages: 3005-11
+ DOI: 10.1093/bioinformatics/btp493
+ PMID: 19689959
+ URL: http://bioinformatics.oxfordjournals.org/content/25/22/3005.abstract
+ eprint: http://bioinformatics.oxfordjournals.org/content/25/22/3005.full.pdf+html
Modified: packages-metadata/m/mopac7.upstream
===================================================================
--- packages-metadata/m/mopac7.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/m/mopac7.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -1,6 +1,6 @@
Name: GaussSum
Reference:
- - Author: James J.P. Stewart
+ - Author: James J. P. Stewart
Title: "MOPAC: A semiempirical molecular orbital program"
Journal: J. Comput.-Aided Mol. Design
Year: 1990
@@ -8,4 +8,5 @@
Number: 1
Pages: 1-103
URL: http://www.springerlink.com/content/p11150521612jm27/
+ eprint: http://www.springerlink.com/content/p11150521612jm27/fulltext.pdf
DOI: 10.1007/BF00128336
Added: packages-metadata/m/mp3diags.copyright
===================================================================
--- packages-metadata/m/mp3diags.copyright (rev 0)
+++ packages-metadata/m/mp3diags.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,30 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: MP3 Diags
+Upstream-Contact: Marian Ciobanu <ciobi at inbox.com>
+Source: http://mp3diags.sourceforge.net/010_getting_the_program.html
+
+Files: *
+Copyright: 2009 Marian Ciobanu <ciobi at inbox.com>
+License: GPL-2+
+
+Files: debian/*
+Copyright: 2009-2012 Alessio Treglia <alessio at debian.org>
+License: GPL-2+
+
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+Comment:
+ You should have received a copy of the GNU General Public License along
+ with this program; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ .
+ On Debian systems the full text of the GNU General Public
+ License can be found in the `/usr/share/common-licenses/GPL-2' file.
Added: packages-metadata/m/mpfr4.copyright
===================================================================
--- packages-metadata/m/mpfr4.copyright (rev 0)
+++ packages-metadata/m/mpfr4.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,19 @@
+MPFR was downloaded from http://www.mpfr.org/.
+
+Copyright 2000, 2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010 Free Software Foundation, Inc.
+Contributed by the Arenaire and Cacao projects, INRIA.
+
+The GNU MPFR Library is free software; you can redistribute it and/or modify it
+under the terms of the GNU Lesser General Public License (either version 3
+of the License, or, at your option, any later version).
+
+For the documentation, this terms apply:
+
+ Permission is granted to copy, distribute and/or modify this document under
+ the terms of the GNU Free Documentation License, Version 1.2 or any later
+ version published by the Free Software Foundation; with no Invariant Sections,
+ with no Front-Cover Texts, and with no Back-Cover Texts.
+
+
+On Debian systems, a copy of the license is located in files
+/usr/share/common-licenses/LGPL-3 and /usr/share/common-licenses/GFDL.
Added: packages-metadata/n/nvidia-graphics-drivers.copyright
===================================================================
--- packages-metadata/n/nvidia-graphics-drivers.copyright (rev 0)
+++ packages-metadata/n/nvidia-graphics-drivers.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,226 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: NVIDIA Linux Display Drivers
+Upstream-Contact: NVIDIA Corporation <linux-bugs at nvidia.com>
+Source:
+ ftp://download.nvidia.com/XFree86/Linux-x86/
+ ftp://download.nvidia.com/XFree86/Linux-x86_64/
+Disclaimer:
+ This package is not part of the GNU/Linux Debian distribution. It is
+ provided in the non-free archive area as a convenience to Debian users.
+ The contents of this package cannot be distributed as part of the Debian
+ distribution because the NVIDIA Software License covering it is not a free
+ software license. No modifications of the included binaries are
+ permitted, and the binaries are not distributed with source code.
+
+Files: *
+Copyright: 1993-2011 NVIDIA Corporation. All rights reserved.
+License: NVIDIA-graphics-drivers
+
+Files: debian/*
+Copyright: 2001-2010 Randall Donald <rdonald at debian.org>
+ 2009-2012 Andreas Beckmann <debian at abeckmann.de>
+ 2010 Russ Allbery <rra at debian.org>
+ Based on packages by Christopher Cheney.
+License: GPL-2+
+ This program is free software; you can redistribute it
+ and/or modify it under the terms of the GNU General Public
+ License as published by the Free Software Foundation; either
+ version 2 of the License, or (at your option) any later
+ version.
+ .
+ This program is distributed in the hope that it will be
+ useful, but WITHOUT ANY WARRANTY; without even the implied
+ warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ PURPOSE. See the GNU General Public License for more
+ details.
+ .
+ You should have received a copy of the GNU General Public
+ License along with this package; if not, write to the Free
+ Software Foundation, Inc., 51 Franklin St, Fifth Floor,
+ Boston, MA 02110-1301 USA
+ .
+ On Debian systems, the full text of the GNU General Public
+ License version 2 can be found in the file
+ `/usr/share/common-licenses/GPL-2'.
+
+License: NVIDIA-graphics-drivers
+ License For Customer Use of NVIDIA Software
+ .
+ .
+ IMPORTANT NOTICE -- READ CAREFULLY: This License For Customer Use of
+ NVIDIA Software ("LICENSE") is the agreement which governs use of
+ the software of NVIDIA Corporation and its subsidiaries ("NVIDIA")
+ downloadable herefrom, including computer software and associated
+ printed materials ("SOFTWARE"). By downloading, installing, copying,
+ or otherwise using the SOFTWARE, you agree to be bound by the terms
+ of this LICENSE. If you do not agree to the terms of this LICENSE,
+ do not download the SOFTWARE.
+ .
+ RECITALS
+ .
+ Use of NVIDIA's products requires three elements: the SOFTWARE, the
+ hardware on a graphics controller board, and a personal computer. The
+ SOFTWARE is protected by copyright laws and international copyright
+ treaties, as well as other intellectual property laws and treaties.
+ The SOFTWARE is not sold, and instead is only licensed for use,
+ strictly in accordance with this document. The hardware is protected
+ by various patents, and is sold, but this agreement does not cover
+ that sale, since it may not necessarily be sold as a package with
+ the SOFTWARE. This agreement sets forth the terms and conditions
+ of the SOFTWARE LICENSE only.
+ .
+ 1. DEFINITIONS
+ .
+ 1.1 Customer. Customer means the entity or individual that
+ downloads the SOFTWARE.
+ .
+ 2. GRANT OF LICENSE
+ .
+ 2.1 Rights and Limitations of Grant. NVIDIA hereby grants Customer
+ the following non-exclusive, non-transferable right to use the
+ SOFTWARE, with the following limitations:
+ .
+ 2.1.1 Rights. Customer may install and use one copy of the SOFTWARE
+ on a single computer, and except for making one back-up copy of
+ the Software, may not otherwise copy the SOFTWARE. This LICENSE
+ of SOFTWARE may not be shared or used concurrently on different
+ computers.
+ .
+ 2.1.2 Linux/FreeBSD Exception. Notwithstanding the foregoing terms
+ of Section 2.1.1, SOFTWARE designed exclusively for use on the Linux or
+ FreeBSD operating systems, or other operating systems derived from the
+ source code to these operating systems, may be copied and redistributed,
+ provided that the binary files thereof are not modified in any way
+ (except for unzipping of compressed files).
+ .
+ 2.1.3 Limitations.
+ .
+ No Reverse Engineering. Customer may not reverse engineer,
+ decompile, or disassemble the SOFTWARE, nor attempt in any other
+ manner to obtain the source code.
+ .
+ No Separation of Components. The SOFTWARE is licensed as a
+ single product. Its component parts may not be separated for use
+ on more than one computer, nor otherwise used separately from the
+ other parts.
+ .
+ No Rental. Customer may not rent or lease the SOFTWARE to someone
+ else.
+ .
+ 3. TERMINATION
+ .
+ This LICENSE will automatically terminate if Customer fails to
+ comply with any of the terms and conditions hereof. In such event,
+ Customer must destroy all copies of the SOFTWARE and all of its
+ component parts.
+ .
+ Defensive Suspension. If Customer commences or participates in any legal
+ proceeding against NVIDIA, then NVIDIA may, in its sole discretion,
+ suspend or terminate all license grants and any other rights provided
+ under this LICENSE during the pendency of such legal proceedings.
+ .
+ 4. COPYRIGHT
+ .
+ All title and copyrights in and to the SOFTWARE (including but
+ not limited to all images, photographs, animations, video, audio,
+ music, text, and other information incorporated into the SOFTWARE),
+ the accompanying printed materials, and any copies of the SOFTWARE,
+ are owned by NVIDIA, or its suppliers. The SOFTWARE is protected
+ by copyright laws and international treaty provisions. Accordingly,
+ Customer is required to treat the SOFTWARE like any other copyrighted
+ material, except as otherwise allowed pursuant to this LICENSE
+ and that it may make one copy of the SOFTWARE solely for backup or
+ archive purposes.
+ .
+ 5. APPLICABLE LAW
+ .
+ This agreement shall be deemed to have been made in, and shall be
+ construed pursuant to, the laws of the State of California.
+ .
+ 6. DISCLAIMER OF WARRANTIES AND LIMITATION ON LIABILITY
+ .
+ 6.1 No Warranties. TO THE MAXIMUM EXTENT PERMITTED BY APPLICABLE
+ LAW, THE SOFTWARE IS PROVIDED "AS IS" AND NVIDIA AND ITS SUPPLIERS
+ DISCLAIM ALL WARRANTIES, EITHER EXPRESS OR IMPLIED, INCLUDING, BUT
+ NOT LIMITED TO, IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS
+ FOR A PARTICULAR PURPOSE.
+ .
+ 6.2 No Liability for Consequential Damages. TO THE MAXIMUM
+ EXTENT PERMITTED BY APPLICABLE LAW, IN NO EVENT SHALL NVIDIA OR
+ ITS SUPPLIERS BE LIABLE FOR ANY SPECIAL, INCIDENTAL, INDIRECT, OR
+ CONSEQUENTIAL DAMAGES WHATSOEVER (INCLUDING, WITHOUT LIMITATION,
+ DAMAGES FOR LOSS OF BUSINESS PROFITS, BUSINESS INTERRUPTION, LOSS
+ OF BUSINESS INFORMATION, OR ANY OTHER PECUNIARY LOSS) ARISING OUT
+ OF THE USE OF OR INABILITY TO USE THE SOFTWARE, EVEN IF NVIDIA HAS
+ BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES.
+ .
+ 7. MISCELLANEOUS
+ .
+ The United Nations Convention on Contracts for the International
+ Sale of Goods is specifically disclaimed. If any provision of this
+ LICENSE is inconsistent with, or cannot be fully enforced under,
+ the law, such provision will be construed as limited to the extent
+ necessary to be consistent with and fully enforceable under the law.
+ This agreement is the final, complete and exclusive agreement between
+ the parties relating to the subject matter hereof, and supersedes
+ all prior or contemporaneous understandings and agreements relating
+ to such subject matter, whether oral or written. Customer agrees
+ that it will not ship, transfer or export the SOFTWARE into any
+ country, or use the SOFTWARE in any manner, prohibited by the
+ United States Bureau of Export Administration or any export laws,
+ restrictions or regulations. This LICENSE may only be modified in
+ writing signed by an authorized officer of NVIDIA.
+Comment:
+ First a note from the README file
+ .
+ Q: Why does NVIDIA not provide rpms anymore?
+ .
+ A: Not every Linux distribution uses rpm, and NVIDIA wanted a single
+ solution that would work across all Linux distributions. As indicated
+ in the NVIDIA Software License, Linux distributions are welcome to
+ repackage and redistribute the NVIDIA Linux driver in whatever package
+ format they wish.
+ .
+ Furthermore, an email from NVIDIA:
+ .
+ Greetings, Randall! Comments below:
+ .
+ On 30 Jul 2003, Randall Donald wrote:
+ .
+ > To whom it may concern,
+ >
+ > My name is Randall Donald and I am the maintainer for the Debian
+ > downloader packages nvidia-glx-src and nvidia-kernel-src.
+ > As stated in your license and the README file
+ > ( "As indicated in the NVIDIA Software License, Linux distributions
+ > are welcome to repackage and redistribute the NVIDIA Linux driver in
+ > whatever package format they wish." )
+ > I wish to include packages containing the Linux driver files in the
+ > Debian archive. I'd like to know if it is legally permitted to
+ > distribute binary kernel modules compiled from the NVIDIA kernel module
+ > source and Debian kernel headers.
+ .
+ This is fine; thanks for asking.
+ .
+ > I am also wondering if the "No Separation of Components" clause
+ > ( No Separation of Components. The SOFTWARE is licensed as a
+ > single product. Its component parts may not be separated for use
+ > on more than one computer, nor otherwise used separately from the
+ > other parts.)
+ > applies to splitting the glx driver and kernel module source into
+ > multiple binary packages.
+ .
+ This is also fine. I believe this section of the license was
+ intended to prevent users from doing things like using our Windows
+ control panel with a competitor's display driver (that's not actually
+ possible, but you get the idea...). In the case of separating the
+ driver into a glx package and a kernel package (like we used to
+ do ourselves), this is simply a packaging issue; of course users
+ will use the packages together when they install.
+ .
+ Please feel free to redistribute the NVIDIA graphics driver.
+ .
+ Thank you for doing this for the NVIDIA+Debian community!
+ .
+ - Andy
+
Added: packages-metadata/n/nvidia-settings.copyright
===================================================================
--- packages-metadata/n/nvidia-settings.copyright (rev 0)
+++ packages-metadata/n/nvidia-settings.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,174 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: nvidia-settings
+Upstream-Contact: NVIDIA Corporation
+Source: ftp://download.nvidia.com/XFree86/nvidia-settings/
+
+Files: *
+Copyright: (C) 2004-2012 NVIDIA Corporation
+License: GPL-2
+
+Files: samples/*
+Copyright: (C) 2004-2011 NVIDIA Corporation
+License: Expat-NVIDIA
+
+Files: src/libXNVCtrl/*
+Copyright: (C) 2008-2010 NVIDIA Corporation
+License: Expat-NVIDIA
+
+Files: src/XF86Config-parser/*
+Copyright: (c) 1997 Metro Link Incorporated
+ (c) 1997-2003 by The XFree86 Project, Inc.
+License: other-MetroLink and other-XFree
+
+Files: src/XF86Config-parser/DRI.c
+Copyright: 1999 Precision Insight, Inc., Cedar Park, Texas. All Rights Reserved.
+License: Expat-Precision
+ Permission is hereby granted, free of charge, to any person obtaining a
+ copy of this software and associated documentation files (the "Software"),
+ to deal in the Software without restriction, including without limitation
+ the rights to use, copy, modify, merge, publish, distribute, sublicense,
+ and/or sell copies of the Software, and to permit persons to whom the
+ Software is furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice (including the next
+ paragraph) shall be included in all copies or substantial portions of the
+ Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
+ PRECISION INSIGHT AND/OR ITS SUPPLIERS BE LIABLE FOR ANY CLAIM, DAMAGES OR
+ OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE,
+ ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
+ DEALINGS IN THE SOFTWARE.
+
+Files: XF86Config-parser/Extensions.c
+Copyright: 2004 Red Hat Inc., Raleigh, North Carolina. All Rights Reserved.
+License: Expat-RedHat
+ Permission is hereby granted, free of charge, to any person obtaining
+ a copy of this software and associated documentation files (the
+ "Software"), to deal in the Software without restriction, including
+ without limitation on the rights to use, copy, modify, merge,
+ publish, distribute, sublicense, and/or sell copies of the Software,
+ and to permit persons to whom the Software is furnished to do so,
+ subject to the following conditions:
+ .
+ The above copyright notice and this permission notice (including the
+ next paragraph) shall be included in all copies or substantial
+ portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NON-INFRINGEMENT. IN NO EVENT SHALL RED HAT AND/OR THEIR SUPPLIERS
+ BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
+ ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
+ CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ SOFTWARE.
+
+Files: src/XF86Config-parser/Generate.c
+Copyright: (C) 2005 NVIDIA Corporation
+ 1999-2002 Red Hat, Inc.
+License: GPL-2
+
+Files: src/XF86Config-parser/Merge.c
+Copyright: (c) 1997 Metro Link Incorporated
+License: other-MetroLink
+
+Files: src/XF86Config-parser/Util.c
+Copyright: (C) 2005 NVIDIA Corporation
+License: GPL-2
+
+Files: src/XF86Config-parser/configProcs.h
+Copyright: (c) 1997-2001 by The XFree86 Project, Inc.
+License: other-XFree
+
+Files: debian/*
+Copyright: © 2004-2010 Randall Donald <rdonald at debian.org>
+ © 2009-2010 Fathi Boudra <fabo at debian.org>
+ © 2011-2012 Andreas Beckmann <debian at abeckmann.de>
+License: GPL-2
+
+License: GPL-2
+ This package is free software; you can redistribute it and/or modify it
+ under the terms of the GNU General Public License version 2 as published
+ by the Free Software Foundation.
+ .
+ This program is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
+ Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License along
+ with this package; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+ .
+ On Debian systems, the full text of the GNU General Public License
+ version 2 can be found in the file /usr/share/common-licenses/GPL-2.
+
+License: Expat-NVIDIA
+ Permission is hereby granted, free of charge, to any person obtaining a copy
+ of this software and associated documentation files (the "Software"), to deal
+ in the Software without restriction, including without limitation the rights
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice (including the next
+ paragraph) shall be included in all copies or substantial portions of the
+ Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ SOFTWARE.
+
+License: other-Metrolink
+ Permission is hereby granted, free of charge, to any person obtaining a
+ copy of this software and associated documentation files (the "Software"),
+ to deal in the Software without restriction, including without limitation
+ the rights to use, copy, modify, merge, publish, distribute, sublicense,
+ and/or sell copies of the Software, and to permit persons to whom the
+ Software is furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice shall be included in
+ all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
+ THE X CONSORTIUM BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+ WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF
+ OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ SOFTWARE.
+ .
+ Except as contained in this notice, the name of the Metro Link shall not be
+ used in advertising or otherwise to promote the sale, use or other dealings
+ in this Software without prior written authorization from Metro Link.
+
+License: other-XFree
+ Permission is hereby granted, free of charge, to any person obtaining a
+ copy of this software and associated documentation files (the "Software"),
+ to deal in the Software without restriction, including without limitation
+ the rights to use, copy, modify, merge, publish, distribute, sublicense,
+ and/or sell copies of the Software, and to permit persons to whom the
+ Software is furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice shall be included in
+ all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
+ THE COPYRIGHT HOLDER(S) OR AUTHOR(S) BE LIABLE FOR ANY CLAIM, DAMAGES OR
+ OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE,
+ ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+ OTHER DEALINGS IN THE SOFTWARE.
+ .
+ Except as contained in this notice, the name of the copyright holder(s)
+ and author(s) shall not be used in advertising or otherwise to promote
+ the sale, use or other dealings in this Software without prior written
+ authorization from the copyright holder(s) and author(s).
Added: packages-metadata/n/nvidia-xconfig.copyright
===================================================================
--- packages-metadata/n/nvidia-xconfig.copyright (rev 0)
+++ packages-metadata/n/nvidia-xconfig.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,227 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: nvidia-xconfig
+Upstream-Contact: NVIDIA Corporation
+Source: ftp://download.nvidia.com/XFree86/nvidia-xconfig/
+
+Files: *
+Copyright: (C) 2004-2012 NVIDIA Corporation
+License: GPL-2
+
+Files: nvidia-cfg.h
+Copyright: (c) 2004 NVIDIA Corp. All rights reserved.
+License: other
+ NOTICE TO USER: The source code is copyrighted under U.S. and
+ international laws. NVIDIA, Corp. of Santa Clara, California owns
+ the copyright and as design patents pending on the design and
+ interface of the NV chips. Users and possessors of this source
+ code are hereby granted a nonexclusive, royalty-free copyright
+ and design patent license to use this code in individual and
+ commercial software.
+ .
+ Any use of this source code must include, in the user documenta-
+ tion and internal comments to the code, notices to the end user
+ as follows:
+ .
+ Copyright (c) 2004 NVIDIA Corp. NVIDIA design patents pending in
+ the U.S. and foreign countries.
+ .
+ NVIDIA CORP. MAKES NO REPRESENTATION ABOUT THE SUITABILITY OF
+ THIS SOURCE CODE FOR ANY PURPOSE. IT IS PROVIDED "AS IS" WITHOUT
+ EXPRESS OR IMPLIED WARRANTY OF ANY KIND. NVIDIA, CORP. DISCLAIMS
+ ALL WARRANTIES WITH REGARD TO THIS SOURCE CODE, INCLUDING ALL
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
+ PARTICULAR PURPOSE. IN NO EVENT SHALL NVIDIA, CORP. BE LIABLE
+ FOR ANY SPECIAL, INDIRECT, INCIDENTAL, OR CONSEQUENTIAL DAMAGES,
+ OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR
+ PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR OTHER
+ TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
+ PERFORMANCE OF THIS SOURCE CODE.
+ .
+ As clarified by experience with other pakcages, NVIDIA applies a very
+ generous interpretation of the term "use" in this license:
+ .
+ GPL licensing note -- nVidia is allowing a liberal interpretation of the
+ documentation restriction above, to merely say that this nVidia's
+ copyright and disclaimer should be included with all code derived from
+ this source.
+
+Files: XF86Config-parser/*
+Copyright: (c) 1997 Metro Link Incorporated
+ (c) 1997-2003 by The XFree86 Project, Inc.
+License: other-MetroLink and other-XFree
+
+Files: XF86Config-parser/DRI.c
+Copyright: 1999 Precision Insight, Inc., Cedar Park, Texas. All Rights Reserved.
+License: Expat-Precision
+ Permission is hereby granted, free of charge, to any person obtaining a
+ copy of this software and associated documentation files (the "Software"),
+ to deal in the Software without restriction, including without limitation
+ the rights to use, copy, modify, merge, publish, distribute, sublicense,
+ and/or sell copies of the Software, and to permit persons to whom the
+ Software is furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice (including the next
+ paragraph) shall be included in all copies or substantial portions of the
+ Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
+ PRECISION INSIGHT AND/OR ITS SUPPLIERS BE LIABLE FOR ANY CLAIM, DAMAGES OR
+ OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE,
+ ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
+ DEALINGS IN THE SOFTWARE.
+
+Files: XF86Config-parser/Extensions.c
+Copyright: 2004 Red Hat Inc., Raleigh, North Carolina. All Rights Reserved.
+License: Expat-RedHat
+ Permission is hereby granted, free of charge, to any person obtaining
+ a copy of this software and associated documentation files (the
+ "Software"), to deal in the Software without restriction, including
+ without limitation on the rights to use, copy, modify, merge,
+ publish, distribute, sublicense, and/or sell copies of the Software,
+ and to permit persons to whom the Software is furnished to do so,
+ subject to the following conditions:
+ .
+ The above copyright notice and this permission notice (including the
+ next paragraph) shall be included in all copies or substantial
+ portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NON-INFRINGEMENT. IN NO EVENT SHALL RED HAT AND/OR THEIR SUPPLIERS
+ BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
+ ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
+ CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ SOFTWARE.
+
+Files: XF86Config-parser/Generate.c
+Copyright: (C) 2005 NVIDIA Corporation
+ 1999-2002 Red Hat, Inc.
+ 2002 Red Hat, Inc.
+License: GPL-2+ and other-GPL
+ This program is free software; you can redistribute it and/or modify it
+ under the terms of the GNU General Public License as published by the
+ Free Software Foundation; either version 2 of the License, or (at your
+ option) any later version.
+ .
+ This program is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
+ Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License along
+ with this package; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+ .
+ On Debian systems, the full text of the GNU General Public License
+ version 2 can be found in the file /usr/share/common-licenses/GPL-2.
+ .
+ This file is also derived from work covered by the following license:
+ .
+ This software may be freely redistributed under the terms of the GNU
+ library public license.
+ .
+ For the purposes of this distribution, we invoke the terms of the GNU
+ Library General Public License allowing work under that license to be
+ distributed under the terms of the GNU General Public License instead.
+
+Files: XF86Config-parser/Merge.c
+Copyright: (c) 1997 Metro Link Incorporated
+License: other-MetroLink
+
+Files: XF86Config-parser/Util.c
+Copyright: (C) 2005 NVIDIA Corporation
+License: GPL-2
+
+Files: XF86Config-parser/configProcs.h
+Copyright: (c) 1997-2001 by The XFree86 Project, Inc.
+License: other-XFree
+
+Files: debian/*
+Copyright: © 2005 Randall Donald <rdonald at debian.org>
+ © 2010-2012 Andreas Beckmann <debian at abeckmann.de>
+License: GPL-2+
+
+License: GPL-2
+ This program is free software; you can redistribute it and/or modify it
+ under the terms and conditions of the GNU General Public License,
+ version 2, as published by the Free Software Foundation.
+ .
+ This program is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
+ Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License along
+ with this package; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+ .
+ On Debian systems, the full text of the GNU General Public License
+ version 2 can be found in the file /usr/share/common-licenses/GPL-2.
+
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify it
+ under the terms of the GNU General Public License as published by the
+ Free Software Foundation; either version 2 of the License, or (at your
+ option) any later version.
+ .
+ This program is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
+ Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License along
+ with this package; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+ .
+ On Debian systems, the full text of the GNU General Public License
+ version 2 can be found in the file /usr/share/common-licenses/GPL-2.
+
+License: other-Metrolink
+ Permission is hereby granted, free of charge, to any person obtaining a
+ copy of this software and associated documentation files (the "Software"),
+ to deal in the Software without restriction, including without limitation
+ the rights to use, copy, modify, merge, publish, distribute, sublicense,
+ and/or sell copies of the Software, and to permit persons to whom the
+ Software is furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice shall be included in
+ all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
+ THE X CONSORTIUM BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
+ WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF
+ OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ SOFTWARE.
+ .
+ Except as contained in this notice, the name of the Metro Link shall not be
+ used in advertising or otherwise to promote the sale, use or other dealings
+ in this Software without prior written authorization from Metro Link.
+
+License: other-XFree
+ Permission is hereby granted, free of charge, to any person obtaining a
+ copy of this software and associated documentation files (the "Software"),
+ to deal in the Software without restriction, including without limitation
+ the rights to use, copy, modify, merge, publish, distribute, sublicense,
+ and/or sell copies of the Software, and to permit persons to whom the
+ Software is furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice shall be included in
+ all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
+ THE COPYRIGHT HOLDER(S) OR AUTHOR(S) BE LIABLE FOR ANY CLAIM, DAMAGES OR
+ OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE,
+ ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
+ OTHER DEALINGS IN THE SOFTWARE.
+ .
+ Except as contained in this notice, the name of the copyright holder(s)
+ and author(s) shall not be used in advertising or otherwise to promote
+ the sale, use or other dealings in this Software without prior written
+ authorization from the copyright holder(s) and author(s).
Added: packages-metadata/o/oval-interpreter.copyright
===================================================================
--- packages-metadata/o/oval-interpreter.copyright (rev 0)
+++ packages-metadata/o/oval-interpreter.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,41 @@
+This package was debianized by Pavel Vinogradov <Pavel.Vinogradov at nixdev.net>
+on Fri, 3 Aug 2007 10:57:04 +0500.
+
+It was downloaded from http://oval.mitre.org/
+
+Upstream Author:
+
+ The MITRE Corporation
+
+Copyright:
+
+ Copyright (C) 2002-2009 The MITRE Corporation
+
+License:
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+
+ * Redistributions of source code must retain the above copyright notice,
+ this list of conditions and the following disclaimer.
+ * Redistributions in binary form must reproduce the above copyright notice,
+ this list of conditions and the following disclaimer in the documentation
+ and/or other materials provided with the distribution.
+ * Neither the name of The MITRE Corporation nor the names of its
+ contributors may be used to endorse or promote products derived from this
+ software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
+ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
+WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
+ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
+(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
+LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
+ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+The Debian packaging is Copyright (C) 2007-2009, Pavel Vinogradov
+<Pavel.Vinogradov at nixdev.net> and is licensed under the GPL, see
+`/usr/share/common-licenses/GPL'.
Modified: packages-metadata/p/pcb.copyright
===================================================================
--- packages-metadata/p/pcb.copyright 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/p/pcb.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -1,4 +1,4 @@
-Format: http://anonscm.debian.org/viewvc/dep/web/deps/dep5.mdwn?view=co&pathrev=174
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0
Upstream-Name: pcb
Upstream-Contact: harry eaton <haceaton at aplcomm.jhuapl.edu>
Source: http://pcb.gpleda.org
@@ -20,7 +20,7 @@
Copyright: 2003-2008 Hamish Moffatt <hamish at debian.org>
1996 Michael Mattice <mattice at mattice.reslife.okstate.edu>
1997-1999 Hartmut Koptein <koptein at debian.org>
- 2009-2011 أحمد المحمودي (Ahmed El-Mahmoudy) <aelmahmoudy at users@users.sourceforge.net>
+ 2009-2012 أحمد المحمودي (Ahmed El-Mahmoudy) <aelmahmoudy at sabily.org>
License: GPL-2+
License: GPL-2+
Modified: packages-metadata/p/phy-spread.upstream
===================================================================
--- packages-metadata/p/phy-spread.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/p/phy-spread.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -1,10 +1,8 @@
Contact: Filip Bielejec <filip.bielejec at rega.kuleuven.be>
-Reference-DOI: 10.1093/bioinformatics/btr481
Homepage: http://www.kuleuven.be/aidslab/phylogeography/SPREAD.html
Name: SPREAD
-Reference-PMID: 21911333
Reference:
- author: Filip Bielejec, Andrew Rambaut, Marc A. Suchard and Philippe Lemey
+ author: Filip Bielejec and Andrew Rambaut and Marc A. Suchard and Philippe Lemey
title: >
SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics
journal: Bioinformatics
@@ -12,5 +10,7 @@
number: 20
pages: 2910-2912
year: 2011
+ PMID: 21911333
+ DOI: 10.1093/bioinformatics/btr481
URL: http://bioinformatics.oxfordjournals.org/content/27/20/2910.full
eprint: http://bioinformatics.oxfordjournals.org/content/early/2011/09/11/bioinformatics.btr481.full.pdf+html
Modified: packages-metadata/p/primer3.upstream
===================================================================
--- packages-metadata/p/primer3.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/p/primer3.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -9,11 +9,14 @@
Bioinformatics Methods and Protocols: Methods in Molecular Biology
Journal: Methods Mol Biol.
Pages: 365-86
- Number: 132
+ Volume: 132
+ Number: 3
Publisher: Humana Press
Editor: Krawetz S, Misener S
PMID: 10547847
DOI: 10.1385/1-59259-192-2:365
+ URL: http://www.springerlink.com/content/u16755q84278vh5w/
+ eprint: http://www.springerlink.com/content/u16755q84278vh5w/fulltext.pdf
Watch: http://sf.net/primer3/primer3-([\d.]*)\.tar\.gz
Webservice:
- http://frodo.wi.mit.edu/primer3/
Modified: packages-metadata/p/probalign.upstream
===================================================================
--- packages-metadata/p/probalign.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/p/probalign.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -2,7 +2,7 @@
Homepage: http://cs.njit.edu/usman/probalign/
Name: Probalign
Reference:
- AUTHOR: Usman Roshan, Dennis R. Livesay
+ AUTHOR: Usman Roshan and Dennis R. Livesay
TITLE: >
Probalign: multiple sequence alignment using partition function posterior probabilities
JOURNAL: Bioinformatics
@@ -11,6 +11,7 @@
VOLUME: 22
NUMBER: 22
URL: http://bioinformatics.oxfordjournals.org/content/22/22/2715.short
+ eprint: http://bioinformatics.oxfordjournals.org/content/22/22/2715.full.pdf+html
ISSN: 1460-2059
DOI: 10.1093/bioinformatics/btl472
PMID: 16954142
Added: packages-metadata/p/pyicqt.copyright
===================================================================
--- packages-metadata/p/pyicqt.copyright (rev 0)
+++ packages-metadata/p/pyicqt.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,282 @@
+This package was debianized by Michal Čihař <nijel at debian.org> on
+Wed, 12 Dec 2007 16:45:27 +0900.
+
+It was downloaded from http://code.google.com/p/pyicqt/
+
+Upstream Authors: Daniel Henninger <jadestorm at nc.rr.com>,
+ James Bunton <james at delx.cjb.net>,
+ Paul Clegg,
+ Jonas Adahl,
+ Magnus Henoch,
+ Serge Trylis,
+ Chris Carlin,
+ Daniel Chandran,
+ Martin von Loewis,
+ Maarten Fonville,
+ Christopher Zorn,
+ Scott Dial,
+ Paul Swartz <z3p at twistedmatrix.com>,
+ Roman Mindalev <r000nster at gmail.com>
+
+Copyright:
+
+pyaimt is Copyright (c) 2004-2007 Daniel Henninger
+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License along
+ with this program; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+
+On Debian systems, the complete text of the GNU General Public
+License Version 2 can be found in the file `/usr/share/common-licenses/GPL-2'.
+
+
+The files src/twistfix/version.py and src/twistfix/__init__.py is
+Copyright (C) 2004-2006 James Bunton <james at delx.cjb.net>
+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License along
+ with this program; if not, write to the Free Software Foundation, Inc.,
+ 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+
+
+On Debian systems, the complete text of the GNU General Public
+License Version 2 can be found in the file `/usr/share/common-licenses/GPL-2'.
+
+
+The files src/sasl.py and src/web/xmppcred.py are
+Copyright (C) 2005-2007 Christopher Zorn <tofu at thetofu.com>
+and OGG, LLC, http://onlinegamegroup.com
+
+ Permission is hereby granted, free of charge, to any person obtaining a copy
+ of this software and associated documentation files (the "Software"), to deal
+ in the Software without restriction, including without limitation the rights to
+ use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies
+ of the Software, and to permit persons to whom the Software is furnished to do
+ so, subject to the following conditions:
+
+ The above copyright notice and this permission notice shall be included in all
+ copies or substantial portions of the Software.
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ SOFTWARE.
+
+
+The files in src/twistfix/words/xish and
+src/twistfix/words/protocols/jabber/ are
+Copyright (C) 2001 Matthew W. Lefkowitz (Twisted,
+the Framework of Your Internet)
+
+ This library is free software; you can redistribute it and/or
+ modify it under the terms of version 2.1 of the GNU Lesser General Public
+ License as published by the Free Software Foundation
+
+ This library is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ Lesser General Public License for more details.
+
+ You should have received a copy of the GNU Lesser General Public
+ License along with this library; if not, write to the Free Software
+ Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+
+On Debian systems, the complete text of the GNU Lesser General Public
+License Version 2.1, can be found in /usr/share/common-licenses/LGPL-2.1.
+
+The file src/tlib/oscar.py is
+Copyright (C) 2001-2005 Twisted Matrix Laboratories
+
+ Permission is hereby granted, free of charge, to any person obtaining
+ a copy of this software and associated documentation files (the
+ "Software"), to deal in the Software without restriction, including
+ without limitation the rights to use, copy, modify, merge, publish,
+ distribute, sublicense, and/or sell copies of the Software, and to
+ permit persons to whom the Software is furnished to do so, subject to
+ the following conditions:
+
+ The above copyright notice and this permission notice shall be
+ included in all copies or substantial portions of the Software.
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
+ LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
+ OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
+ WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+
+The file src/tlib/ifcompat.py is Copyright (C) 2005 Divmod, Inc.
+
+ Permission is hereby granted, free of charge, to any person obtaining
+ a copy of this software and associated documentation files (the
+ "Software"), to deal in the Software without restriction, including
+ without limitation the rights to use, copy, modify, merge, publish,
+ distribute, sublicense, and/or sell copies of the Software, and to
+ permit persons to whom the Software is furnished to do so, subject to
+ the following conditions:
+
+ The above copyright notice and this permission notice shall be
+ included in all copies or substantial portions of the Software.
+
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
+ LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
+ OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
+ WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
+
+
+The file src/bool.py is Copyright (C) 2002 Guido van Rossum <guido at python.org>
+
+ A. HISTORY OF THE SOFTWARE
+ ==========================
+
+ Python was created in the early 1990s by Guido van Rossum at Stichting
+ Mathematisch Centrum (CWI, see http://www.cwi.nl) in the Netherlands
+ as a successor of a language called ABC. Guido remains Python's
+ principal author, although it includes many contributions from others.
+
+ In 1995, Guido continued his work on Python at the Corporation for
+ National Research Initiatives (CNRI, see http://www.cnri.reston.va.us)
+ in Reston, Virginia where he released several versions of the
+ software.
+
+ In May 2000, Guido and the Python core development team moved to
+ BeOpen.com to form the BeOpen PythonLabs team. In October of the same
+ year, the PythonLabs team moved to Digital Creations (now Zope
+ Corporation, see http://www.zope.com). In 2001, the Python Software
+ Foundation (PSF, see http://www.python.org/psf/) was formed, a
+ non-profit organization created specifically to own Python-related
+ Intellectual Property. Zope Corporation is a sponsoring member of
+ the PSF.
+
+ All Python releases are Open Source (see http://www.opensource.org for
+ the Open Source Definition). Historically, most, but not all, Python
+ releases have also been GPL-compatible; the table below summarizes
+ the various releases.
+
+ Release Derived Year Owner GPL-
+ from compatible? (1)
+
+ 0.9.0 thru 1.2 1991-1995 CWI yes
+ 1.3 thru 1.5.2 1.2 1995-1999 CNRI yes
+ 1.6 1.5.2 2000 CNRI no
+ 2.0 1.6 2000 BeOpen.com no
+ 1.6.1 1.6 2001 CNRI yes (2)
+ 2.1 2.0+1.6.1 2001 PSF no
+ 2.0.1 2.0+1.6.1 2001 PSF yes
+ 2.1.1 2.1+2.0.1 2001 PSF yes
+ 2.2 2.1.1 2001 PSF yes
+ 2.1.2 2.1.1 2002 PSF yes
+ 2.1.3 2.1.2 2002 PSF yes
+ 2.2.1 2.2 2002 PSF yes
+ 2.2.2 2.2.1 2002 PSF yes
+ 2.2.3 2.2.2 2003 PSF yes
+ 2.3 2.2.2 2002-2003 PSF yes
+ 2.3.1 2.3 2002-2003 PSF yes
+ 2.3.2 2.3.1 2002-2003 PSF yes
+ 2.3.3 2.3.2 2002-2003 PSF yes
+ 2.3.4 2.3.3 2004 PSF yes
+ 2.3.5 2.3.4 2005 PSF yes
+ 2.4 2.3 2004 PSF yes
+ 2.4.1 2.4 2005 PSF yes
+ 2.4.2 2.4.1 2005 PSF yes
+
+ Footnotes:
+
+ (1) GPL-compatible doesn't mean that we're distributing Python under
+ the GPL. All Python licenses, unlike the GPL, let you distribute
+ a modified version without making your changes open source. The
+ GPL-compatible licenses make it possible to combine Python with
+ other software that is released under the GPL; the others don't.
+
+ (2) According to Richard Stallman, 1.6.1 is not GPL-compatible,
+ because its license has a choice of law clause. According to
+ CNRI, however, Stallman's lawyer has told CNRI's lawyer that 1.6.1
+ is "not incompatible" with the GPL.
+
+ Thanks to the many outside volunteers who have worked under Guido's
+ direction to make these releases possible.
+
+
+ B. TERMS AND CONDITIONS FOR ACCESSING OR OTHERWISE USING PYTHON
+ ===============================================================
+
+ PSF LICENSE AGREEMENT FOR PYTHON 2.4
+ ------------------------------------
+
+ 1. This LICENSE AGREEMENT is between the Python Software Foundation
+ ("PSF"), and the Individual or Organization ("Licensee") accessing and
+ otherwise using Python 2.4 software in source or binary form and its
+ associated documentation.
+
+ 2. Subject to the terms and conditions of this License Agreement, PSF
+ hereby grants Licensee a nonexclusive, royalty-free, world-wide
+ license to reproduce, analyze, test, perform and/or display publicly,
+ prepare derivative works, distribute, and otherwise use Python 2.4
+ alone or in any derivative version, provided, however, that PSF's
+ License Agreement and PSF's notice of copyright, i.e., "Copyright (c)
+ 2001, 2002, 2003, 2004 Python Software Foundation; All Rights Reserved"
+ are retained in Python 2.4 alone or in any derivative version prepared
+ by Licensee.
+
+ 3. In the event Licensee prepares a derivative work that is based on
+ or incorporates Python 2.4 or any part thereof, and wants to make
+ the derivative work available to others as provided herein, then
+ Licensee hereby agrees to include in any such work a brief summary of
+ the changes made to Python 2.4.
+
+ 4. PSF is making Python 2.4 available to Licensee on an "AS IS"
+ basis. PSF MAKES NO REPRESENTATIONS OR WARRANTIES, EXPRESS OR
+ IMPLIED. BY WAY OF EXAMPLE, BUT NOT LIMITATION, PSF MAKES NO AND
+ DISCLAIMS ANY REPRESENTATION OR WARRANTY OF MERCHANTABILITY OR FITNESS
+ FOR ANY PARTICULAR PURPOSE OR THAT THE USE OF PYTHON 2.4 WILL NOT
+ INFRINGE ANY THIRD PARTY RIGHTS.
+
+ 5. PSF SHALL NOT BE LIABLE TO LICENSEE OR ANY OTHER USERS OF PYTHON
+ 2.4 FOR ANY INCIDENTAL, SPECIAL, OR CONSEQUENTIAL DAMAGES OR LOSS AS
+ A RESULT OF MODIFYING, DISTRIBUTING, OR OTHERWISE USING PYTHON 2.4,
+ OR ANY DERIVATIVE THEREOF, EVEN IF ADVISED OF THE POSSIBILITY THEREOF.
+
+ 6. This License Agreement will automatically terminate upon a material
+ breach of its terms and conditions.
+
+ 7. Nothing in this License Agreement shall be deemed to create any
+ relationship of agency, partnership, or joint venture between PSF and
+ Licensee. This License Agreement does not grant permission to use PSF
+ trademarks or trade name in a trademark sense to endorse or promote
+ products or services of Licensee, or any third party.
+
+ 8. By copying, installing or otherwise using Python 2.4, Licensee
+ agrees to be bound by the terms and conditions of this License
+ Agreement.
+
+
+The Debian packaging is Copyriht (C) 2007-2009, Michal Čihař <nijel at debian.org>
+(based on work of Patrick Ringl <patrick_ at freenet.de>) and is licensed under
+the GPL, see `/usr/share/common-licenses/GPL-2'.
Added: packages-metadata/p/pyquery.copyright
===================================================================
--- packages-metadata/p/pyquery.copyright (rev 0)
+++ packages-metadata/p/pyquery.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,45 @@
+This work was packaged for Debian by:
+
+ Jonathan Wiltshire <debian at jwiltshire.org.uk> on Thu, 22 Oct 2009 19:08:07 +0100
+
+It was downloaded from http://pypi.python.org/pypi/pyquery
+
+Copyright:
+
+ Copyright (C) 2008 - Olivier Lauzanne <olauzanne at gmail.com>
+
+License:
+
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted provided that the following conditions are
+ met:
+
+ 1. Redistributions of source code must retain the above copyright
+ notice, this list of conditions and the following disclaimer.
+
+ 2. Redistributions in binary form must reproduce the above copyright
+ notice, this list of conditions and the following disclaimer in
+ the documentation and/or other materials provided with the
+ distribution.
+
+ 3. Neither the name of Infrae nor the names of its contributors may
+ be used to endorse or promote products derived from this software
+ without specific prior written permission.
+
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
+ "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
+ LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
+ A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL INFRAE OR
+ CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
+ EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
+ PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
+ PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
+ LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
+ NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+The Debian packaging is:
+
+ Copyright (C) 2009 Jonathan Wiltshire <debian at jwiltshire.org.uk>
+
+and is also made available under the BSD license as above.
Added: packages-metadata/p/python-jsonrpc2.copyright
===================================================================
--- packages-metadata/p/python-jsonrpc2.copyright (rev 0)
+++ packages-metadata/p/python-jsonrpc2.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,31 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: jsonrpc2
+Source: http://pypi.python.org/pypi/jsonrpc2/
+
+Files: *
+Copyright: 2010 Atsushi Odagiri <aodagx at gmail com>
+License: other
+
+Files: debian/*
+Copyright: 2010-2011 TANIGUCHI Takaki <takaki at debian.org>
+License: other
+
+License: other
+ Permission is hereby granted, free of charge, to any person obtaining a copy
+ of this software and associated documentation files (the "Software"), to deal
+ in the Software without restriction, including without limitation the rights
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice shall be included in
+ all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+ THE SOFTWARE.
+
Added: packages-metadata/p/python-oauth2.copyright
===================================================================
--- packages-metadata/p/python-oauth2.copyright (rev 0)
+++ packages-metadata/p/python-oauth2.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,32 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: python-oauth2
+Source: http://pypi.python.org/pypi/oauth2
+
+Files: *
+Copyright: Joe Stump <joe at simplegeo com>
+ 2007-2010 Leah Culver, Joe Stump, Mark Paschal, Vic Fryzel
+License: MIT
+
+Files: debian/*
+Copyright: 2010 TANIGUCHI Takaki <takaki at debian.org>
+License: MIT
+
+License: MIT
+ Permission is hereby granted, free of charge, to any person obtaining a copy
+ of this software and associated documentation files (the "Software"), to deal
+ in the Software without restriction, including without limitation the rights
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+ copies of the Software, and to permit persons to whom the Software is
+ furnished to do so, subject to the following conditions:
+ .
+ The above copyright notice and this permission notice shall be included in
+ all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+ THE SOFTWARE.
+
Added: packages-metadata/p/python-translationstring.copyright
===================================================================
--- packages-metadata/p/python-translationstring.copyright (rev 0)
+++ packages-metadata/p/python-translationstring.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,63 @@
+This work was packaged for Debian by:
+
+ TANIGUCHI Takaki <takaki at debian.org> on Fri, 26 Nov 2010 10:40:06 +0900
+
+It was downloaded from:
+
+ http://pypi.python.org/pypi/translationstring
+
+Upstream Author:
+
+ Chris McDonough, Agendaless Consulting <repoze-dev at lists repoze org>
+
+Copyright:
+
+ Copyright (c) 2010 Agendaless Consulting and Contributors.
+
+License:
+
+ A copyright notice accompanies this license document that identifies
+ the copyright holders.
+
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted provided that the following conditions are
+ met:
+
+ 1. Redistributions in source code must retain the accompanying
+ copyright notice, this list of conditions, and the following
+ disclaimer.
+
+ 2. Redistributions in binary form must reproduce the accompanying
+ copyright notice, this list of conditions, and the following
+ disclaimer in the documentation and/or other materials provided
+ with the distribution.
+
+ 3. Names of the copyright holders must not be used to endorse or
+ promote products derived from this software without prior
+ written permission from the copyright holders.
+
+ 4. If any files are modified, you must cause the modified files to
+ carry prominent notices stating that you changed the files and
+ the date of any change.
+
+ Disclaimer
+
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS ``AS IS'' AND
+ ANY EXPRESSED OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
+ TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
+ PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
+ HOLDERS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
+ EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED
+ TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
+ DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
+ ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR
+ TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF
+ THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
+ SUCH DAMAGE.
+
+The Debian packaging is:
+
+ Copyright (C) 2010 TANIGUCHI Takaki <takaki at debian.org>
+
+and is licensed under the GPL version 3,
+see "/usr/share/common-licenses/GPL-3".
Added: packages-metadata/p/python-venusian.copyright
===================================================================
--- packages-metadata/p/python-venusian.copyright (rev 0)
+++ packages-metadata/p/python-venusian.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,120 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: python-venusian
+Source: http://pypi.python.org/pypi/venusian
+
+Files: *
+Copyright: 2010 Agendaless Consulting and Contributors.<repoze-dev at lists.repoze.org>
+License: other
+ A copyright notice accompanies this license document that identifies
+ the copyright holders.
+ .
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted provided that the following conditions are
+ met:
+ .
+ 1. Redistributions in source code must retain the accompanying
+ copyright notice, this list of conditions, and the following
+ disclaimer.
+ .
+ 2. Redistributions in binary form must reproduce the accompanying
+ copyright notice, this list of conditions, and the following
+ disclaimer in the documentation and/or other materials provided
+ with the distribution.
+ .
+ 3. Names of the copyright holders must not be used to endorse or
+ promote products derived from this software without prior
+ written permission from the copyright holders.
+ .
+ 4. If any files are modified, you must cause the modified files to
+ carry prominent notices stating that you changed the files and
+ the date of any change.
+ .
+ Disclaimer
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS ``AS IS'' AND
+ ANY EXPRESSED OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
+ TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
+ PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
+ HOLDERS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
+ EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED
+ TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
+ DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
+ ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR
+ TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF
+ THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
+ SUCH DAMAGE.
+
+Files: venusian/advice.py venusian/tests/test_advice.py
+Copyright: 2003 Zope Corporation and Contributors.
+License: Zope-2.1
+ A copyright notice accompanies this license document that
+ identifies the copyright holders.
+ .
+ This license has been certified as open source. It has also
+ been designated as GPL compatible by the Free Software
+ Foundation (FSF).
+ .
+ Redistribution and use in source and binary forms, with or
+ without modification, are permitted provided that the
+ following conditions are met:
+ .
+ 1. Redistributions in source code must retain the
+ accompanying copyright notice, this list of conditions,
+ and the following disclaimer.
+ .
+ 2. Redistributions in binary form must reproduce the accompanying
+ copyright notice, this list of conditions, and the
+ following disclaimer in the documentation and/or other
+ materials provided with the distribution.
+ .
+ 3. Names of the copyright holders must not be used to
+ endorse or promote products derived from this software
+ without prior written permission from the copyright
+ holders.
+ .
+ 4. The right to distribute this software or to use it for
+ any purpose does not give you the right to use
+ Servicemarks (sm) or Trademarks (tm) of the copyright
+ holders. Use of them is covered by separate agreement
+ with the copyright holders.
+ .
+ 5. If any files are modified, you must cause the modified
+ files to carry prominent notices stating that you changed
+ the files and the date of any change.
+ .
+ Disclaimer
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS ``AS IS''
+ AND ANY EXPRESSED OR IMPLIED WARRANTIES, INCLUDING, BUT
+ NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY
+ AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN
+ NO EVENT SHALL THE COPYRIGHT HOLDERS BE
+ LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
+ EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
+ LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
+ LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
+ HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+ CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
+ OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
+ DAMAGE.
+
+Files: debian/*
+Copyright: 2010-2011 TANIGUCHI Takaki <takaki at debian.org>
+License: GPL-3
+ This package is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 3 can be found in "/usr/share/common-licenses/GPL-3".
+
Modified: packages-metadata/r/r-cran-epi.upstream
===================================================================
--- packages-metadata/r/r-cran-epi.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/r/r-cran-epi.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -1,6 +1,6 @@
Reference:
Title: "Lexis: An R Class for Epidemiological Studies with Long-Term Follow-Up"
- Author: Martyn Plummer, Bendix Carstensen
+ Author: Martyn Plummer and Bendix Carstensen
Journal: Journal of Statistical Software
Year: 2011
Volume: 38
Added: packages-metadata/r/ruby-dataobjects-mysql.copyright
===================================================================
--- packages-metadata/r/ruby-dataobjects-mysql.copyright (rev 0)
+++ packages-metadata/r/ruby-dataobjects-mysql.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,32 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: do_mysql
+Source: http://github.com/datamapper/do
+
+Files: *
+Copyright: 2007-2011 Yehuda Katz <wycats at gmail.com>
+ 2007-2011 Dirkjan Bussink <d.bussink at gmail.com>
+License: Expat
+
+Files: debian/*
+Copyright: 2011 Cédric Boutillier <cedric.boutillier at gmail.com>
+License: Expat
+
+License: Expat
+ Permission is hereby granted, free of charge, to any person obtaining
+ a copy of this software and associated documentation files (the
+ "Software"), to deal in the Software without restriction, including
+ without limitation the rights to use, copy, modify, merge, publish,
+ distribute, sublicense, and/or sell copies of the Software, and to
+ permit persons to whom the Software is furnished to do so, subject to
+ the following conditions:
+ .
+ The above copyright notice and this permission notice shall be
+ included in all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
+ IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
+ CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
+ TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
+ SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Modified: packages-metadata/s/samtools.upstream
===================================================================
--- packages-metadata/s/samtools.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/s/samtools.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -4,7 +4,7 @@
checkout: debcheckout -a git://git.debian.org/debian-med/samtools.git
Name: SAM tools
Reference:
- author: Li, Heng and Handsaker, Bob and Wysoker, Alec and Fennell, Tim and Ruan, Jue and Homer, Nils and Marth, Gabor and Abecasis, Goncalo and Durbin, Richard and 1000 Genome Project Data Processing Subgroup
+ author: Heng Li and Bob Handsaker and Alec Wysoker and Tim Fennell and Jue Ruan and Nils Homer and Gabor Marth and Goncalo Abecasis and Richard Durbin and 1000 Genome Project Data Processing Subgroup
title: The Sequence Alignment/Map (SAM) Format and SAMtools
journal: Bioinformatics
volume: 25
Modified: packages-metadata/s/seaview.upstream
===================================================================
--- packages-metadata/s/seaview.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/s/seaview.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -16,12 +16,17 @@
DOI: 10.1093/molbev/msp259
URL: http://mbe.oxfordjournals.org/cgi/content/abstract/27/2/221
eprint: http://mbe.oxfordjournals.org/cgi/reprint/27/2/221.pdf
- - Author: N. Galtier, M. Gouy, C. Gautier
+ - Author: N. Galtier and M. Gouy and C. Gautier
Title: SeaView and Phylo_win, two graphic tools for sequence alignment and molecular phylogeny
Journal: Comput. Applic. Biosci
Volume: 12
+ Number: 6
Pages: 543-548
Year: 1996
+ PMID: 9021275
+ DOI: 10.1093/bioinformatics/12.6.543
+ URL: http://bioinformatics.oxfordjournals.org/content/12/6/543.abstract
+ eprint: http://bioinformatics.oxfordjournals.org/content/12/6/543.full.pdf+html
Screenshots:
- http://pbil.univ-lyon1.fr/binaries/seaview4.png
- http://pbil.univ-lyon1.fr/binaries/seaview-tree.png
Added: packages-metadata/t/tex-common.copyright
===================================================================
--- packages-metadata/t/tex-common.copyright (rev 0)
+++ packages-metadata/t/tex-common.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,98 @@
+This package is a collection of files needed to use and/or build TeX
+packages in Debian. Its contents are either written by the Debian
+maintainers, or taken and adapted from the upstream sources.
+
+It was first created Mon, 13 Jun 2005 17:55:58 +0200.
+
+License:
+
+Unless otherwise indicated (see individual file listing below), it is
+covered by the following license, the GPL:
+
+This package is free software; you can redistribute it and/or modify
+it under the terms of the GNU General Public License as published by
+the Free Software Foundation; either version 2 of the License, or (at
+your option) any later version.
+
+This package is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+GNU General Public License for more details.
+
+You should have received a copy of the GNU General Public License,
+version 2, with the Debian GNU/Linux distribution in file
+/usr/share/common-licenses/GPL-2; if not, write to the Free Software
+Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301,
+USA.
+
+
+Copyright Holders of individual files, sorted by directory:
+
+- toplevel:
+
+ split-texmf: Frank Küster (2005) <frank at debian.org>
+ TODO is probably not copyrightable and contains contributions
+ by all coworkers.
+
+- debian:
+
+ Currently, all files are Copyright 2004,2005 Frank Küster
+ <frank at debian.org>, except
+
+ common.variables: Frank Küster (2004,2005) <frank at debian.org> (based on a
+ framework by Davide Salvetti (1999-2002)
+ <salve at debian.org>)
+
+ rules: Frank Küster (2004,2005) <frank at debian.org> with eperl code
+ based on work by Davide, as above
+
+- doc:
+
+ Makefile version.ent tex-sed:
+ Frank Küster (2004,2005) <frank at debian.org>
+ Hilmar Preusse (2005) <hille42 at web.de>
+ Debian-TeX-Policy.sgml:
+ Frank Küster (2004) <frank at debian.org>
+ Richard Lewis (2005) <rtf at jabble.com>
+ Norbert Preining (2005) <preining at logic.at>
+
+
+- dsfp:
+
+ dsf-patchfunc dsf-patch.mk:
+ Frank Küster (2004,2005) <frank at debian.org>
+
+- scripts:
+
+ update-fmtutil: Atsuhito Kohda (2002,2003) <kohda at debian.org>
+ Julian Gilbey (2002) <jdg at debian.org>
+ update-fmtutil.8: Atsuhito Kohda (2002) <kohda at debian.org>
+ update-texmf: Atsuhito Kohda (2002,2003) <kohda at debian.org>
+ Frank Küster (2004) <frank at debian.org>
+ update-texmf.8: Atsuhito Kohda (2002,2003) <kohda at debian.org>
+ Hilmar Preusse (2004) <hille42 at web.de>
+ update-updmap: Atsuhito Kohda (2002,2003) <kohda at debian.org>
+ Frank Küster (2004) <frank at debian.org>
+ Florent Rougon (2005) <f.rougon at free.fr>
+ update-updmap.1: Atsuhito Kohda (2002,2003) <kohda at debian.org>
+ Florent Rougon (2004,2005) <f.rougon at free.fr>
+ update-fontlang: Norbert Preinig (2005) <preining at logic.at> based
+ on update-updmap
+ update-language.8: Frank Küster (2005) <frank at debian.org>
+ update-fontlang.8: Frank Küster (2005) <frank at debian.org>
+ Atsuhito Kohda (2002,2003) <kohda at debian.org>
+ Florent Rougon (2004,2005) <f.rougon at free.fr>
+ tex.pm: Jan Hauke Rahm (2009) <info at jhr-online.de>
+
+- conf/texmf.d/
+
+ all files are split from texmf.in-teTeX, Copyright
+ Thomas Esser (1995-2005) <te at dbs.uni-hannover.de>, in the Public
+ Domain, except
+
+ 90TeXDoc.cnf: Atsuhito Kohda (2003) <kohda at debian.org>
+
+- conf/fmt.d/
+
+ 00tex.cnf: Thomas Esser (1998,1999) <te at dbs.uni-hannover.de>,
+ in the Public Domain
Modified: packages-metadata/t/tm-align.upstream
===================================================================
--- packages-metadata/t/tm-align.upstream 2012-05-09 09:56:54 UTC (rev 2300)
+++ packages-metadata/t/tm-align.upstream 2012-05-10 03:00:36 UTC (rev 2301)
@@ -2,7 +2,7 @@
Homepage: http://zhanglab.ccmb.med.umich.edu/TM-align/
Name: TM-align & TM-score
Reference:
- AUTHOR: Y. Zhang, J. Skolnick
+ AUTHOR: Yang Zhang and Jeffrey Skolnick
TITLE: >
TM-align: A protein structure alignment algorithm based on TM-score
JOURNAL: Nucleic Acids Research
@@ -10,7 +10,8 @@
PAGES: 2302-2309
VOLUME: 33
NUMBER: 7
- URL: http://zhanglab.ccmb.med.umich.edu/TM-align/TMalign.pdf
+ URL: http://nar.oxfordjournals.org/content/33/7/2302
+ eprint: http://zhanglab.ccmb.med.umich.edu/TM-align/TMalign.pdf
ISSN: 1362-4962
DOI: 10.1093/nar/gki524
PMID: 15849316
Added: packages-metadata/t/tora.copyright
===================================================================
--- packages-metadata/t/tora.copyright (rev 0)
+++ packages-metadata/t/tora.copyright 2012-05-10 03:00:36 UTC (rev 2301)
@@ -0,0 +1,26 @@
+This package was debianized by Michael Meskes <meskes at debian.org> on
+Fri, 25 Jan 2002 09:37:32 +0100.
+
+It was downloaded from http://tora.sourceforge.net/
+
+Upstream Authors: Petr Vaněk
+ Mike Johnson
+ Alexey Danilchenko
+ Ivan Brezina
+ Oliver Jehle
+ Raj Thukral
+ Thomas Porschberg
+ Volker Götz
+ Nathan Neulinger
+ Henrik Johnson
+
+Copyright:
+Portions Copyright (C) 2000-2001 Underscore AB
+Portions Copyright (C) 2003-2005 Quest Software, Inc.
+Portions Copyright (C) 2004-2008 Numerous Other Contributors
+
+You may use, distribute and copy Toolkit for Oracle under the terms of
+GNU General Public License version 2.
+
+On Debian GNU/Linux systems, a copy of the GNU GPL can be found in
+/usr/share/common-licenses/GPL-2.
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