r35214 - in /packages/teem/trunk/debian: Doxyfile changelog control get-orig-source patches/30_cmakewarnings.dpatch rules
domibel-guest at users.alioth.debian.org
domibel-guest at users.alioth.debian.org
Sat Sep 13 17:30:27 UTC 2008
Author: domibel-guest
Date: Sat Sep 13 17:30:27 2008
New Revision: 35214
URL: http://svn.debian.org/wsvn/debian-science/?sc=1&rev=35214
Log:
added doxygen documentation
Added:
packages/teem/trunk/debian/Doxyfile
Modified:
packages/teem/trunk/debian/changelog
packages/teem/trunk/debian/control
packages/teem/trunk/debian/get-orig-source
packages/teem/trunk/debian/patches/30_cmakewarnings.dpatch
packages/teem/trunk/debian/rules
Added: packages/teem/trunk/debian/Doxyfile
URL: http://svn.debian.org/wsvn/debian-science/packages/teem/trunk/debian/Doxyfile?rev=35214&op=file
==============================================================================
--- packages/teem/trunk/debian/Doxyfile (added)
+++ packages/teem/trunk/debian/Doxyfile Sat Sep 13 17:30:27 2008
@@ -1,0 +1,304 @@
+# Doxyfile 1.5.6
+
+#---------------------------------------------------------------------------
+# Project related configuration options
+#---------------------------------------------------------------------------
+DOXYFILE_ENCODING = UTF-8
+PROJECT_NAME = TEEM
+PROJECT_NUMBER = "svn 3886"
+OUTPUT_DIRECTORY = doc
+CREATE_SUBDIRS = NO
+OUTPUT_LANGUAGE = English
+BRIEF_MEMBER_DESC = YES
+REPEAT_BRIEF = YES
+ABBREVIATE_BRIEF = "The $name class" \
+ "The $name widget" \
+ "The $name file" \
+ is \
+ provides \
+ specifies \
+ contains \
+ represents \
+ a \
+ an \
+ the
+ALWAYS_DETAILED_SEC = NO
+INLINE_INHERITED_MEMB = NO
+FULL_PATH_NAMES = YES
+STRIP_FROM_PATH =
+STRIP_FROM_INC_PATH =
+SHORT_NAMES = NO
+JAVADOC_AUTOBRIEF = NO
+QT_AUTOBRIEF = NO
+MULTILINE_CPP_IS_BRIEF = NO
+DETAILS_AT_TOP = NO
+INHERIT_DOCS = YES
+SEPARATE_MEMBER_PAGES = NO
+TAB_SIZE = 8
+ALIASES =
+OPTIMIZE_OUTPUT_FOR_C = YES
+OPTIMIZE_OUTPUT_JAVA = NO
+OPTIMIZE_FOR_FORTRAN = NO
+OPTIMIZE_OUTPUT_VHDL = NO
+BUILTIN_STL_SUPPORT = NO
+CPP_CLI_SUPPORT = NO
+SIP_SUPPORT = NO
+IDL_PROPERTY_SUPPORT = YES
+DISTRIBUTE_GROUP_DOC = NO
+SUBGROUPING = YES
+TYPEDEF_HIDES_STRUCT = NO
+#---------------------------------------------------------------------------
+# Build related configuration options
+#---------------------------------------------------------------------------
+EXTRACT_ALL = YES
+EXTRACT_PRIVATE = YES
+EXTRACT_STATIC = YES
+EXTRACT_LOCAL_CLASSES = YES
+EXTRACT_LOCAL_METHODS = NO
+EXTRACT_ANON_NSPACES = NO
+HIDE_UNDOC_MEMBERS = NO
+HIDE_UNDOC_CLASSES = NO
+HIDE_FRIEND_COMPOUNDS = NO
+HIDE_IN_BODY_DOCS = NO
+INTERNAL_DOCS = NO
+CASE_SENSE_NAMES = YES
+HIDE_SCOPE_NAMES = NO
+SHOW_INCLUDE_FILES = YES
+INLINE_INFO = YES
+SORT_MEMBER_DOCS = YES
+SORT_BRIEF_DOCS = NO
+SORT_GROUP_NAMES = NO
+SORT_BY_SCOPE_NAME = NO
+GENERATE_TODOLIST = YES
+GENERATE_TESTLIST = YES
+GENERATE_BUGLIST = YES
+GENERATE_DEPRECATEDLIST= YES
+ENABLED_SECTIONS =
+MAX_INITIALIZER_LINES = 30
+SHOW_USED_FILES = YES
+SHOW_DIRECTORIES = NO
+SHOW_FILES = YES
+SHOW_NAMESPACES = YES
+FILE_VERSION_FILTER =
+#---------------------------------------------------------------------------
+# configuration options related to warning and progress messages
+#---------------------------------------------------------------------------
+QUIET = NO
+WARNINGS = YES
+WARN_IF_UNDOCUMENTED = YES
+WARN_IF_DOC_ERROR = YES
+WARN_NO_PARAMDOC = NO
+WARN_FORMAT = "$file:$line: $text"
+WARN_LOGFILE =
+#---------------------------------------------------------------------------
+# configuration options related to the input files
+#---------------------------------------------------------------------------
+INPUT = src
+INPUT_ENCODING = UTF-8
+FILE_PATTERNS = *.c \
+ *.cc \
+ *.cxx \
+ *.cpp \
+ *.c++ \
+ *.d \
+ *.java \
+ *.ii \
+ *.ixx \
+ *.ipp \
+ *.i++ \
+ *.inl \
+ *.h \
+ *.hh \
+ *.hxx \
+ *.hpp \
+ *.h++ \
+ *.idl \
+ *.odl \
+ *.cs \
+ *.php \
+ *.php3 \
+ *.inc \
+ *.m \
+ *.mm \
+ *.dox \
+ *.py \
+ *.f90 \
+ *.f \
+ *.vhd \
+ *.vhdl \
+ *.C \
+ *.CC \
+ *.C++ \
+ *.II \
+ *.I++ \
+ *.H \
+ *.HH \
+ *.H++ \
+ *.CS \
+ *.PHP \
+ *.PHP3 \
+ *.M \
+ *.MM \
+ *.PY \
+ *.F90 \
+ *.F \
+ *.VHD \
+ *.VHDL
+RECURSIVE = YES
+EXCLUDE =
+EXCLUDE_SYMLINKS = NO
+EXCLUDE_PATTERNS =
+EXCLUDE_SYMBOLS =
+EXAMPLE_PATH =
+EXAMPLE_PATTERNS = *
+EXAMPLE_RECURSIVE = NO
+IMAGE_PATH =
+INPUT_FILTER =
+FILTER_PATTERNS =
+FILTER_SOURCE_FILES = NO
+#---------------------------------------------------------------------------
+# configuration options related to source browsing
+#---------------------------------------------------------------------------
+SOURCE_BROWSER = NO
+INLINE_SOURCES = NO
+STRIP_CODE_COMMENTS = YES
+REFERENCED_BY_RELATION = NO
+REFERENCES_RELATION = NO
+REFERENCES_LINK_SOURCE = YES
+USE_HTAGS = NO
+VERBATIM_HEADERS = NO
+#---------------------------------------------------------------------------
+# configuration options related to the alphabetical class index
+#---------------------------------------------------------------------------
+ALPHABETICAL_INDEX = NO
+COLS_IN_ALPHA_INDEX = 5
+IGNORE_PREFIX =
+#---------------------------------------------------------------------------
+# configuration options related to the HTML output
+#---------------------------------------------------------------------------
+GENERATE_HTML = YES
+HTML_OUTPUT = html
+HTML_FILE_EXTENSION = .html
+HTML_HEADER =
+HTML_FOOTER =
+HTML_STYLESHEET =
+HTML_ALIGN_MEMBERS = YES
+GENERATE_HTMLHELP = NO
+GENERATE_DOCSET = NO
+DOCSET_FEEDNAME = "Doxygen generated docs"
+DOCSET_BUNDLE_ID = org.doxygen.Project
+HTML_DYNAMIC_SECTIONS = NO
+CHM_FILE =
+HHC_LOCATION =
+GENERATE_CHI = NO
+CHM_INDEX_ENCODING =
+BINARY_TOC = NO
+TOC_EXPAND = NO
+DISABLE_INDEX = NO
+ENUM_VALUES_PER_LINE = 4
+GENERATE_TREEVIEW = ALL
+TREEVIEW_WIDTH = 250
+FORMULA_FONTSIZE = 10
+#---------------------------------------------------------------------------
+# configuration options related to the LaTeX output
+#---------------------------------------------------------------------------
+GENERATE_LATEX = NO
+LATEX_OUTPUT = latex
+LATEX_CMD_NAME = latex
+MAKEINDEX_CMD_NAME = makeindex
+COMPACT_LATEX = NO
+PAPER_TYPE = a4wide
+EXTRA_PACKAGES =
+LATEX_HEADER =
+PDF_HYPERLINKS = YES
+USE_PDFLATEX = YES
+LATEX_BATCHMODE = NO
+LATEX_HIDE_INDICES = NO
+#---------------------------------------------------------------------------
+# configuration options related to the RTF output
+#---------------------------------------------------------------------------
+GENERATE_RTF = NO
+RTF_OUTPUT = rtf
+COMPACT_RTF = NO
+RTF_HYPERLINKS = NO
+RTF_STYLESHEET_FILE =
+RTF_EXTENSIONS_FILE =
+#---------------------------------------------------------------------------
+# configuration options related to the man page output
+#---------------------------------------------------------------------------
+GENERATE_MAN = NO
+MAN_OUTPUT = man
+MAN_EXTENSION = .3
+MAN_LINKS = NO
+#---------------------------------------------------------------------------
+# configuration options related to the XML output
+#---------------------------------------------------------------------------
+GENERATE_XML = NO
+XML_OUTPUT = xml
+XML_SCHEMA =
+XML_DTD =
+XML_PROGRAMLISTING = YES
+#---------------------------------------------------------------------------
+# configuration options for the AutoGen Definitions output
+#---------------------------------------------------------------------------
+GENERATE_AUTOGEN_DEF = NO
+#---------------------------------------------------------------------------
+# configuration options related to the Perl module output
+#---------------------------------------------------------------------------
+GENERATE_PERLMOD = NO
+PERLMOD_LATEX = NO
+PERLMOD_PRETTY = YES
+PERLMOD_MAKEVAR_PREFIX =
+#---------------------------------------------------------------------------
+# Configuration options related to the preprocessor
+#---------------------------------------------------------------------------
+ENABLE_PREPROCESSING = YES
+MACRO_EXPANSION = NO
+EXPAND_ONLY_PREDEF = NO
+SEARCH_INCLUDES = YES
+INCLUDE_PATH =
+INCLUDE_FILE_PATTERNS =
+PREDEFINED =
+EXPAND_AS_DEFINED =
+SKIP_FUNCTION_MACROS = YES
+#---------------------------------------------------------------------------
+# Configuration::additions related to external references
+#---------------------------------------------------------------------------
+TAGFILES =
+GENERATE_TAGFILE =
+ALLEXTERNALS = NO
+EXTERNAL_GROUPS = YES
+PERL_PATH = /usr/bin/perl
+#---------------------------------------------------------------------------
+# Configuration options related to the dot tool
+#---------------------------------------------------------------------------
+CLASS_DIAGRAMS = NO
+MSCGEN_PATH =
+HIDE_UNDOC_RELATIONS = YES
+HAVE_DOT = YES
+DOT_FONTNAME = FreeSans
+DOT_FONTPATH =
+CLASS_GRAPH = YES
+COLLABORATION_GRAPH = YES
+GROUP_GRAPHS = YES
+UML_LOOK = NO
+TEMPLATE_RELATIONS = NO
+INCLUDE_GRAPH = YES
+INCLUDED_BY_GRAPH = YES
+CALL_GRAPH = NO
+CALLER_GRAPH = NO
+GRAPHICAL_HIERARCHY = YES
+DIRECTORY_GRAPH = YES
+DOT_IMAGE_FORMAT = png
+DOT_PATH =
+DOTFILE_DIRS =
+DOT_GRAPH_MAX_NODES = 50
+MAX_DOT_GRAPH_DEPTH = 1000
+DOT_TRANSPARENT = YES
+DOT_MULTI_TARGETS = NO
+GENERATE_LEGEND = YES
+DOT_CLEANUP = YES
+#---------------------------------------------------------------------------
+# Configuration::additions related to the search engine
+#---------------------------------------------------------------------------
+SEARCHENGINE = NO
Modified: packages/teem/trunk/debian/changelog
URL: http://svn.debian.org/wsvn/debian-science/packages/teem/trunk/debian/changelog?rev=35214&op=diff
==============================================================================
--- packages/teem/trunk/debian/changelog (original)
+++ packages/teem/trunk/debian/changelog Sat Sep 13 17:30:27 2008
@@ -1,6 +1,6 @@
-teem (1.10.0~svn3873-1) unstable; urgency=low
+teem (1.10.0~svn3886-1) unstable; urgency=low
* Initial release (Closes: #473044)
- -- Dominique Belhachemi <domibel at cs.tu-berlin.de> Mon, 31 Mar 2008 09:41:47 +0000
+ -- Dominique Belhachemi <domibel at cs.tu-berlin.de> Sat, 6 Sep 2008 09:41:47 +0000
Modified: packages/teem/trunk/debian/control
URL: http://svn.debian.org/wsvn/debian-science/packages/teem/trunk/debian/control?rev=35214&op=diff
==============================================================================
--- packages/teem/trunk/debian/control (original)
+++ packages/teem/trunk/debian/control Sat Sep 13 17:30:27 2008
@@ -3,7 +3,7 @@
Maintainer: Debian Science Team <debian-science-maintainers at lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Dominique Belhachemi <domibel at cs.tu-berlin.de>
-Build-Depends: debhelper (>= 5), cmake, dpatch
+Build-Depends: debhelper (>= 5), cmake, dpatch, doxygen, graphviz
Standards-Version: 3.8.0
Vcs-Browser: http://svn.debian.org/wsvn/debian-science/packages/teem/trunk/?rev=0&sc=0
Vcs-Svn: svn://svn.debian.org/svn/debian-science/packages/teem/trunk/
@@ -50,3 +50,26 @@
based on any quantity Gage can measure
* Ten: for estimating, processing, and visualizing diffusion tensor fields,
including fiber tractography methods.
+
+Package: teem-doc
+Section: doc
+Architecture: all
+Description: Teem - A visualization library - documentation
+ Teem is a coordinated group of libraries for representing, processing, and
+ visualizing scientific raster data. Teem includes command-line tools that
+ permit the library functions to be quickly applied to files and streams,
+ without having to write any code. The most important and useful libraries in
+ Teem are:
+ .
+ * Nrrd (and the unu command-line tool on top of it) supports a range of
+ operations for transforming N-dimensional raster data (resample, crop,
+ slice, project, histogram, etc.), as well as the NRRD file format for
+ storing arrays and their meta-information.
+ * Gage: fast convolution-based measurements at arbitrary point locations in
+ volume datasets (scalar, vector, tensor, etc.)
+ * Mite: a multi-threaded ray-casting volume render with transfer functions
+ based on any quantity Gage can measure
+ * Ten: for estimating, processing, and visualizing diffusion tensor fields,
+ including fiber tractography methods.
+
+
Modified: packages/teem/trunk/debian/get-orig-source
URL: http://svn.debian.org/wsvn/debian-science/packages/teem/trunk/debian/get-orig-source?rev=35214&op=diff
==============================================================================
--- packages/teem/trunk/debian/get-orig-source (original)
+++ packages/teem/trunk/debian/get-orig-source Sat Sep 13 17:30:27 2008
@@ -1,5 +1,5 @@
VERSION=1.10.0
-REVISION=3873
+REVISION=3886
svn co -r $REVISION https://teem.svn.sourceforge.net/svnroot/teem/teem/trunk teem
#REVISION=`svnversion teem/`
Modified: packages/teem/trunk/debian/patches/30_cmakewarnings.dpatch
URL: http://svn.debian.org/wsvn/debian-science/packages/teem/trunk/debian/patches/30_cmakewarnings.dpatch?rev=35214&op=diff
==============================================================================
--- packages/teem/trunk/debian/patches/30_cmakewarnings.dpatch (original)
+++ packages/teem/trunk/debian/patches/30_cmakewarnings.dpatch Sat Sep 13 17:30:27 2008
@@ -2,7 +2,7 @@
## 30_cmakewarnings.dpatch by <domibel at sid1500>
##
## All lines beginning with `## DP:' are a description of the patch.
-## DP: No description.
+## DP: set cmake_policy
@DPATCH@
diff -urNad teem-1.10.0~svn3873~/src/bin/CMakeLists.txt teem-1.10.0~svn3873/src/bin/CMakeLists.txt
Modified: packages/teem/trunk/debian/rules
URL: http://svn.debian.org/wsvn/debian-science/packages/teem/trunk/debian/rules?rev=35214&op=diff
==============================================================================
--- packages/teem/trunk/debian/rules (original)
+++ packages/teem/trunk/debian/rules Sat Sep 13 17:30:27 2008
@@ -1,12 +1,10 @@
#!/usr/bin/make -f
-
PACKAGE=teem
# DPatch
DEB_SOURCE_PACKAGE:=$(PACKAGE)
include /usr/share/dpatch/dpatch.make
-
# Uncomment this to turn on verbose mode.
@@ -19,16 +17,6 @@
-DCMAKE_SHARED_LINKER_FLAGS="-Wl,--as-needed" \
-DCMAKE_EXE_LINKER_FLAGS="-Wl,--as-needed" \
-DCMAKE_SKIP_RPATH:BOOL=ON
-
-
-# shared library versions, option 1
-version=2.0.5
-major=2
-# option 2, assuming the library is created as src/.libs/libfoo.so.2.0.5 or so
-#version=`ls src/.libs/lib*.so.* | \
-# awk '{if (match($$0,/[0-9]+\.[0-9]+\.[0-9]+$$/)) print substr($$0,RSTART)}'`
-#major=`ls src/.libs/lib*.so.* | \
-# awk '{if (match($$0,/\.so\.[0-9]+$$/)) print substr($$0,RSTART+4)}'`
get-orig-source:
@@ -64,6 +52,9 @@
# build shared libs and binaries
cd $(SHARED_BUILD_PATH) && $(MAKE) VERBOSE=1
+ # generate documentation
+ doxygen debian/Doxyfile
+
touch $@
clean: clean-patched unpatch
@@ -76,6 +67,7 @@
# Add here commands to clean up after the build process.
rm -rf $(STATIC_BUILD_PATH)
rm -rf $(SHARED_BUILD_PATH)
+ rm -rf doc
dh_clean
@@ -93,6 +85,21 @@
# install static libs
cd $(STATIC_BUILD_PATH)/bin/ \
&& cp libteem.a $(CURDIR)/debian/tmp/usr/lib/
+
+
+ dh_install -plibteem1 debian/tmp/usr/lib/lib*.so.* usr/lib
+
+ dh_install -plibteem1-dev debian/tmp/usr/lib/lib*.so usr/lib
+ dh_install -plibteem1-dev debian/tmp/usr/lib/lib*.a usr/lib
+ dh_install -plibteem1-dev debian/tmp/usr/lib/TEEM-1.10 usr/lib
+ dh_install -plibteem1-dev debian/tmp/usr/include/teem/* usr/include/teem
+
+# dh_install -pteem-examples Examples usr/share/KWWidgets
+
+ dh_install -pteem-doc doc/* /usr/share/doc/teem-doc
+
+
+ dpkg-gensymbols -plibteem1 -Pdebian/libteem1
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