r38512 - in /packages/fenics/dolfin/trunk/debian: cdbs/ changelog control copyright copyright_hints licensecheck patches/ patches/build.patch patches/series rules

johannr-guest at users.alioth.debian.org johannr-guest at users.alioth.debian.org
Wed May 18 15:26:52 UTC 2011


Author: johannr-guest
Date: Wed May 18 15:26:45 2011
New Revision: 38512

URL: http://svn.debian.org/wsvn/debian-science/?sc=1&rev=38512
Log:
* New upstream release. This release moves to SWIG 2.0 and it
  incorporates a significant number of bug fixes.
* debian/control:
  - Bump Standards-Version to 3.9.2 (no changes needed).
  - Replace swig with swig2.0 in Build-Depends.
  - Add swig2.0 to Depends for binary package python-dolfin.
  - Bump required version for ufc and python-ufc in Build-Depends.
  - Bump required version for ufc, python-ufc, python-ffc, python-ufl
    and python-instant in Depends for binary packages libdolfin0-dev
    and python-dolfin.
* debian/rules:
  - Set SWIG_EXECUTABLE to /usr/bin/swig2.0.
  - Use DEB_COMPRESS_EXCLUDE_ALL instead of deprecated
    DEB_COMPRESS_EXCLUDE.
  - Include cdbs utils.mk rule for automated copyright checks.
* debian/copyright:
  - Update for upstream license change to LGPLv3.
  - Switch to DEP-5 format.
* Remove custom cdbs rules and licensecheck script for copyright check.
* Disable MPI on lam architectures (closes: #627172).
* Add patch to fix FTBFS when Trilinos is enabled (closes: #624925).

Added:
    packages/fenics/dolfin/trunk/debian/patches/
    packages/fenics/dolfin/trunk/debian/patches/build.patch
    packages/fenics/dolfin/trunk/debian/patches/series
Removed:
    packages/fenics/dolfin/trunk/debian/cdbs/
    packages/fenics/dolfin/trunk/debian/licensecheck
Modified:
    packages/fenics/dolfin/trunk/debian/changelog
    packages/fenics/dolfin/trunk/debian/control
    packages/fenics/dolfin/trunk/debian/copyright
    packages/fenics/dolfin/trunk/debian/copyright_hints
    packages/fenics/dolfin/trunk/debian/rules

Modified: packages/fenics/dolfin/trunk/debian/changelog
URL: http://svn.debian.org/wsvn/debian-science/packages/fenics/dolfin/trunk/debian/changelog?rev=38512&op=diff
==============================================================================
--- packages/fenics/dolfin/trunk/debian/changelog (original)
+++ packages/fenics/dolfin/trunk/debian/changelog Wed May 18 15:26:45 2011
@@ -1,3 +1,29 @@
+dolfin (0.9.11-1) unstable; urgency=low
+
+  * New upstream release. This release moves to SWIG 2.0 and it
+    incorporates a significant number of bug fixes.
+  * debian/control:
+    - Bump Standards-Version to 3.9.2 (no changes needed).
+    - Replace swig with swig2.0 in Build-Depends.
+    - Add swig2.0 to Depends for binary package python-dolfin.
+    - Bump required version for ufc and python-ufc in Build-Depends.
+    - Bump required version for ufc, python-ufc, python-ffc, python-ufl
+      and python-instant in Depends for binary packages libdolfin0-dev
+      and python-dolfin.
+  * debian/rules:
+    - Set SWIG_EXECUTABLE to /usr/bin/swig2.0.
+    - Use DEB_COMPRESS_EXCLUDE_ALL instead of deprecated
+      DEB_COMPRESS_EXCLUDE.
+    - Include cdbs utils.mk rule for automated copyright checks.
+  * debian/copyright:
+    - Update for upstream license change to LGPLv3.
+    - Switch to DEP-5 format.
+  * Remove custom cdbs rules and licensecheck script for copyright check.
+  * Disable MPI on lam architectures (closes: #627172).
+  * Add patch to fix FTBFS when Trilinos is enabled (closes: #624925).
+
+ -- Johannes Ring <johannr at simula.no>  Wed, 18 May 2011 13:30:21 +0200
+
 dolfin (0.9.10-2) unstable; urgency=low
 
   * Move from python-central to dh_python2 (closes: #616793).

Modified: packages/fenics/dolfin/trunk/debian/control
URL: http://svn.debian.org/wsvn/debian-science/packages/fenics/dolfin/trunk/debian/control?rev=38512&op=diff
==============================================================================
--- packages/fenics/dolfin/trunk/debian/control (original)
+++ packages/fenics/dolfin/trunk/debian/control Wed May 18 15:26:45 2011
@@ -7,7 +7,7 @@
  debhelper (>= 7),
  python-all-dev (>= 2.6.6-3~),
  cmake (>= 2.8.0),
- swig (>= 1.3.35),
+ swig2.0,
  python-numpy,
  pkg-config,
  libxml2-dev,
@@ -17,14 +17,14 @@
  libboost-serialization-dev,
  libboost-thread-dev,
  libsuitesparse-dev,
- ufc (>= 2.0.0),
- python-ufc (>= 2.0.0),
- libptscotch-dev,
- libpetsc3.1-dev [!hurd-i386 !s390],
- libslepc3.1-dev [!armel !hurd-i386 !ia64 !mips !s390 !sparc],
+ ufc (>= 2.0.1),
+ python-ufc (>= 2.0.1),
+ libptscotch-dev [!armel !mips !mipsel !s390 !sparc],
+ libpetsc3.1-dev [!armel !hurd-i386 !mips !mipsel !s390 !sparc],
+ libslepc3.1-dev [!armel !hurd-i386 !ia64 !mips !mipsel !s390 !sparc],
  libarmadillo-dev,
- libtrilinos-dev [!armel !hurd-i386 !mips !mipsel !s390]
-Standards-Version: 3.9.1
+ libtrilinos-dev [!armel !hurd-i386 !mips !mipsel !s390 !sparc]
+Standards-Version: 3.9.2
 X-Python-Version: >= 2.5
 Homepage: http://www.fenicsproject.org
 DM-Upload-Allowed: yes
@@ -43,14 +43,14 @@
  libboost-serialization-dev,
  libboost-thread-dev,
  libsuitesparse-dev,
- libptscotch-dev,
- libpetsc3.1-dev [!hurd-i386 !s390],
- libslepc3.1-dev [!armel !hurd-i386 !ia64 !mips !s390 !sparc],
+ libptscotch-dev [!armel !mips !mipsel !s390 !sparc],
+ libpetsc3.1-dev [!armel !hurd-i386 !mips !mipsel !s390 !sparc],
+ libslepc3.1-dev [!armel !hurd-i386 !ia64 !mips !mipsel !s390 !sparc],
  libarmadillo-dev,
  cmake (>= 2.8.0),
- libtrilinos-dev [!armel !hurd-i386 !mips !mipsel !s390],
- ufc (>= 2.0.0),
- python-ufc (>= 2.0.0),
+ libtrilinos-dev [!armel !hurd-i386 !mips !mipsel !s390 !sparc],
+ ufc (>= 2.0.1),
+ python-ufc (>= 2.0.1),
  ${misc:Depends}
 Description: Shared links and header files for DOLFIN
  DOLFIN is the C++/Python interface of FEniCS, providing a consistent PSE
@@ -95,13 +95,14 @@
 Architecture: any
 Depends: libdolfin0-dev (= ${binary:Version}),
  libdolfin0 (= ${binary:Version}),
- python-ufc (>= 2.0.0),
- python-ffc (>= 0.9.9),
+ python-ufc (>= 2.0.1),
+ python-ffc (>= 0.9.10),
  python-viper (>= 0.4.7),
- python-ufl (>= 0.9.0),
- python-instant (>= 0.9.9),
+ python-ufl (>= 0.9.1),
+ python-instant (>= 0.9.10),
  python-numpy,
- python-pytrilinos [!armel !hurd-i386 !mips !mipsel !s390],
+ python-pytrilinos [!armel !hurd-i386 !mips !mipsel !s390 !sparc],
+ swig2.0,
  ${python:Depends},
  ${shlibs:Depends},
  ${misc:Depends}

Modified: packages/fenics/dolfin/trunk/debian/copyright
URL: http://svn.debian.org/wsvn/debian-science/packages/fenics/dolfin/trunk/debian/copyright?rev=38512&op=diff
==============================================================================
--- packages/fenics/dolfin/trunk/debian/copyright (original)
+++ packages/fenics/dolfin/trunk/debian/copyright Wed May 18 15:26:45 2011
@@ -1,1483 +1,602 @@
-Format-Specification: http://svn.debian.org/wsvn/dep/web/deps/dep5.mdwn?op=file&rev=135
-Name: DOLFIN
-Maintainer: dolfin at lists.launchpad.net
-	http://www.fenicsproject.org
+Format: http://svn.debian.org/wsvn/dep/web/deps/dep5.mdwn?rev=174
+Upstream-Name: DOLFIN
+Upstream-Contact: dolfin at lists.launchpad.net
+ http://www.fenicsproject.org
 Source: http://launchpad.net/dolfin
 
-Copyright: 2002-2010, Anders Logg <logg at simula.no>
-	   2004-2010, Garth N. Wells <gnw20 at cam.ac.uk>
-	   2002-2009, Johan Hoffman <hoffman at csc.kth.se>
-	   2003-2009, Johan Jansson <johanjan at math.chalmers.se>
-License: LGPL-2.1
-
-Files: bench/fem/speedup/cpp/Poisson.ufl
-	bench/fem/speedup/cpp/analyse-bench
-	bench/fem/speedup/cpp/assemble-poisson.cpp
-	bench/fem/speedup/cpp/solve-poisson.cpp
-	demo/undocumented/collection/cpp/main.cpp
-	demo/undocumented/reaction-diffusion/cpp/main.cpp
-	demo/undocumented/reaction-diffusion/python/demo.py
-	demo/undocumented/submesh/cpp/main.cpp
-	demo/undocumented/submesh/python/demo.py
-	demo/undocumented/time-series/cpp/main.cpp
-	demo/undocumented/time-series/python/demo.py
-	dolfin/adaptivity/Extrapolation.cpp
-	dolfin/adaptivity/Extrapolation.h
-	dolfin/adaptivity/TimeSeries.cpp
-	dolfin/adaptivity/TimeSeries.h
-	dolfin/common/utils.cpp
-	dolfin/common/utils.h
-	dolfin/fem/BasisFunction.h
-	dolfin/function/Data.cpp
-	dolfin/function/Data.h
-	dolfin/function/Expression.cpp
-	dolfin/function/Expression.h
-	dolfin/function/GenericFunction.cpp
-	dolfin/function/GenericFunction.h
-	dolfin/io/BinaryFile.cpp
-	dolfin/io/BinaryFile.h
-	dolfin/mesh/SubMesh.cpp
-	dolfin/mesh/SubMesh.h
-	dolfin/parameter/GlobalParameters.cpp
-	dolfin/parameter/GlobalParameters.h
-	dolfin/parameter/Parameter.cpp
-	dolfin/parameter/Parameter.h
-	dolfin/parameter/Parameters.cpp
-	dolfin/parameter/Parameters.h
-	dolfin/plot/FunctionPlotData.cpp
-	dolfin/plot/FunctionPlotData.h
-	dolfin/swig/fem_pre.i
-	site-packages/dolfin/fem/bcs.py
-	site-packages/dolfin/fem/interpolate.py
-	site-packages/dolfin/mesh/ale.py
-	site-packages/dolfin/mesh/refine.py
-	site-packages/dolfin_utils/commands.py
-	test/system/parallel-assembly-solve/solver.py
-	test/system/parallel-assembly-solve/test.py
-	test/system/test.py
-	test/unit/python-extras/python/test.py
-	utils/scripts/formatcode
-	utils/tetgen/dolfin-tetgen
-Copyright: 2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/assembly/cpp/ReactionDiffusion.ufl
-	demo/undocumented/bcs/cpp/Poisson.ufl
-	demo/undocumented/bcs/cpp/main.cpp
-	demo/undocumented/bcs/python/demo.py
-	demo/undocumented/eval/cpp/Projection.ufl
-	demo/undocumented/eval/cpp/main.cpp
-	demo/undocumented/eval/python/demo.py
-	demo/undocumented/optimization/python/demo.py
-	demo/undocumented/projection-interpolation/python/demo.py
-	dolfin/ale/HarmonicSmoothing.cpp
-	dolfin/ale/HarmonicSmoothing.h
-	dolfin/ale/Poisson1D.ufl
-	dolfin/ale/Poisson2D.ufl
-	dolfin/ale/Poisson3D.ufl
-	dolfin/common/Timer.h
-	dolfin/common/constants.h
-	dolfin/common/types.h
-	dolfin/fem/FiniteElement.cpp
-	dolfin/function/SubSpace.cpp
-	dolfin/function/SubSpace.h
-	dolfin/la/DefaultFactory.cpp
-	dolfin/la/DefaultFactory.h
-	dolfin/la/LinearSolver.cpp
-	dolfin/la/SingularSolver.h
-	dolfin/mesh/DomainBoundary.h
-	dolfin/mesh/DynamicMeshEditor.cpp
-	dolfin/mesh/DynamicMeshEditor.h
-	dolfin/mesh/MeshSmoothing.cpp
-	site-packages/dolfin/fem/errornorm.py
-	site-packages/dolfin/fem/norm.py
-	test/unit/function/cpp/Projection.form
-	test/unit/function/cpp/Projection.ufl
-	utils/order/dolfin-order
-	utils/python/extract2d
-Copyright: 2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/fem/convergence/cpp/forms/Poisson2D_1.ufl
-	bench/fem/convergence/cpp/forms/Poisson2D_2.ufl
-	bench/fem/convergence/cpp/forms/Poisson2D_3.ufl
-	bench/fem/convergence/cpp/forms/Poisson2D_4.ufl
-	bench/fem/convergence/cpp/forms/Poisson2D_5.ufl
-	bench/fem/convergence/cpp/forms/Poisson3D_1.ufl
-	bench/fem/convergence/cpp/forms/Poisson3D_2.ufl
-	bench/fem/convergence/cpp/forms/Poisson3D_3.ufl
-	bench/fem/convergence/cpp/forms/Poisson3D_4.ufl
-	bench/fem/convergence/cpp/forms/Poisson3D_5.ufl
-	demo/la/eigenvalue/cpp/StiffnessMatrix.ufl
-	demo/undocumented/block-matrix/cpp/StiffnessMatrix.ufl
-	demo/undocumented/complex/cpp/main.cpp
-	demo/undocumented/functional/cpp/EnergyNorm.ufl
-	demo/undocumented/simple/cpp/MassMatrix3D.ufl
-	demo/undocumented/simple/cpp/StiffnessMatrix3D.ufl
-	dolfin/la/PETScBaseMatrix.h
-	dolfin/la/PETScLUSolver.h
-	dolfin/main/init.cpp
-	dolfin/mesh/UnitCircle.h
-	dolfin/mesh/UnitCube.h
-	dolfin/ode/MonoAdaptiveFixedPointSolver.h
-	dolfin/ode/MonoAdaptiveJacobian.h
-	dolfin/ode/MonoAdaptiveNewtonSolver.h
-	dolfin/ode/MultiAdaptiveFixedPointSolver.h
-	dolfin/ode/MultiAdaptiveJacobian.h
-	dolfin/ode/MultiAdaptiveNewtonSolver.h
-	dolfin/ode/MultiAdaptivePreconditioner.cpp
-	dolfin/ode/MultiAdaptivePreconditioner.h
-	dolfin/ode/MultiAdaptivity.cpp
-	dolfin/ode/MultiAdaptivity.h
-	dolfin/ode/UpdatedMultiAdaptiveJacobian.h
-Copyright: 2005-2006, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/la/eigenvalue/python/demo.py
-	demo/pde/mixed-poisson/python/demo.py
-	demo/undocumented/advection-diffusion/python/demo.py
-	demo/undocumented/aliev-panfilov/python/demo.py
-	demo/undocumented/dg-poisson/python/demo.py
-	demo/undocumented/elasticity/python/demo.py
-	demo/undocumented/functional/python/demo.py
-	demo/undocumented/lift-drag/python/demo.py
-	demo/undocumented/meshfunction/python/demo.py
-	demo/undocumented/nonlinear-poisson/python/demo.py
-	demo/undocumented/periodic/python/demo.py
-	demo/undocumented/poisson1D/cpp/Poisson.ufl
-	demo/undocumented/poisson1D/cpp/main.cpp
-	demo/undocumented/poisson1D/python/demo.py
-	demo/undocumented/quadrature/python/demo.py
-	demo/undocumented/simple/python/demo.py
-	demo/undocumented/stokes-mini/python/demo.py
-	demo/undocumented/stokes-stabilized/python/demo.py
-	demo/undocumented/stokes-taylor-hood/python/demo.py
-	demo/undocumented/subdomains/python/demo.py
-	dolfin/mesh/Interval.cpp
-	dolfin/mesh/Interval.h
-	dolfin/mesh/UnitInterval.h
-Copyright: 2007, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
-
-Files: demo/undocumented/entityintersection/python/demo.py
-	demo/undocumented/meshintersection/3D/python/demo.py
-	dolfin/mesh/IntersectionOperator.cpp
-	dolfin/mesh/IntersectionOperator.h
-	dolfin/mesh/IntersectionOperatorImplementation.h
-	dolfin/mesh/MeshPrimitive.h
-	dolfin/mesh/Point_3_Bbox_3_intersection.h
-	dolfin/mesh/Point_3_Iso_Cuboid_3_intersection.h
-	dolfin/mesh/Point_3_Line_3_intersection.h
-	dolfin/mesh/Point_3_Point_3_intersection.h
-	dolfin/mesh/Point_3_Ray_3_intersection.h
-	dolfin/mesh/Point_3_Segment_3_intersection.h
-	dolfin/mesh/Point_3_Tetrahedron_3_intersection.h
-	dolfin/mesh/Point_3_Triangle_3_intersection.h
-	dolfin/mesh/PrimitiveTraits.h
-	dolfin/mesh/Segment_3_Segment_3_intersection.h
-	dolfin/mesh/Segment_3_Tetrahedron_3_intersection.h
-	dolfin/mesh/Tetrahedron_3_Bbox_3_intersection.h
-	dolfin/mesh/Tetrahedron_3_Tetrahedron_3_intersection.h
-	dolfin/mesh/Tree_Traits.h
-	dolfin/mesh/added_intersection_3.h
-	dolfin/swig/std_set_typemaps.i
-Copyright: 2009, Andre Massing <massing at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/io/XMLArray.cpp
-	dolfin/io/XMLArray.h
-	dolfin/io/XMLDolfin.cpp
-	dolfin/io/XMLDolfin.h
-	dolfin/io/XMLFile.cpp
-	dolfin/io/XMLFile.h
-	dolfin/io/XMLFunctionPlotData.cpp
-	dolfin/io/XMLHandler.cpp
-	dolfin/io/XMLHandler.h
-	dolfin/io/XMLIndent.cpp
-	dolfin/io/XMLIndent.h
-	dolfin/io/XMLMap.cpp
-	dolfin/io/XMLMap.h
-	dolfin/io/XMLMeshData.cpp
-	dolfin/io/XMLMeshData.h
-	dolfin/io/XMLMeshFunction.cpp
-	dolfin/io/XMLMeshFunction.h
-	dolfin/io/XMLSkipper.cpp
-	dolfin/io/XMLSkipper.h
-	dolfin/io/XMLVectorMapping.cpp
-	dolfin/io/XMLVectorMapping.h
-	dolfin/mesh/MeshFunction.cpp
-Copyright: 2009, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/lift-drag/cpp/main.cpp
-	demo/undocumented/periodic/cpp/main.cpp
-	demo/undocumented/plot/python/demo.py
-	demo/undocumented/subdomains/cpp/main.cpp
-	dolfin/fem/BoundaryCondition.cpp
-	dolfin/fem/BoundaryCondition.h
-	dolfin/fem/PeriodicBC.cpp
-	dolfin/fem/PeriodicBC.h
-	dolfin/fem/UFC.cpp
-	dolfin/fem/UFC.h
-	dolfin/la/GenericTensor.h
-	dolfin/la/STLMatrix.cpp
-	dolfin/la/STLMatrix.h
-	dolfin/la/Scalar.h
-	dolfin/la/solve.cpp
-	dolfin/la/solve.h
-	dolfin/mesh/MeshOrdering.h
-	dolfin/mesh/SubDomain.cpp
-	dolfin/mesh/SubDomain.h
-	site-packages/dolfin/fem/assemble.py
-	site-packages/dolfin/fem/variationalproblem.py
-Copyright: 2007-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/mesh/Box.cpp
-	dolfin/mesh/UnitCircle.cpp
-	dolfin/mesh/UnitCube.cpp
-	dolfin/mesh/UnitSphere.cpp
-	dolfin/ode/Adaptivity.cpp
-	dolfin/ode/ComplexODE.cpp
-	dolfin/ode/ComplexODE.h
-	dolfin/ode/Method.h
-	dolfin/ode/MonoAdaptiveFixedPointSolver.cpp
-	dolfin/ode/MonoAdaptiveTimeSlab.cpp
-	dolfin/ode/MonoAdaptiveTimeSlab.h
-	dolfin/ode/MonoAdaptivity.cpp
-	dolfin/ode/MultiAdaptiveFixedPointSolver.cpp
-	dolfin/ode/MultiAdaptiveJacobian.cpp
-	dolfin/ode/MultiAdaptiveTimeSlab.cpp
-	dolfin/ode/MultiAdaptiveTimeSlab.h
-	dolfin/ode/TimeSlab.cpp
-	dolfin/ode/TimeSlabJacobian.cpp
-	dolfin/ode/TimeSlabJacobian.h
-	dolfin/ode/UpdatedMultiAdaptiveJacobian.cpp
-Copyright: 2005-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/pde/poisson/cpp/main.cpp
-	demo/undocumented/equality/cpp/main.cpp
-	demo/undocumented/refinement/cpp/main.cpp
-	dolfin/function/Constant.cpp
-	dolfin/function/Constant.h
-	dolfin/function/SpecialFunctions.cpp
-	dolfin/function/SpecialFunctions.h
-	dolfin/mesh/CellType.cpp
-	dolfin/mesh/CellType.h
-	dolfin/mesh/Mesh.cpp
-	dolfin/mesh/Mesh.h
-	dolfin/mesh/MeshEditor.cpp
-	dolfin/mesh/MeshEditor.h
-	dolfin/mesh/MeshEntity.cpp
-	dolfin/mesh/MeshEntity.h
-	dolfin/mesh/MeshFunction.h
-	dolfin/mesh/MeshTopology.cpp
-	dolfin/mesh/MeshTopology.h
-	dolfin/swig/mesh_post.i
-	dolfin/swig/mesh_pre.i
-Copyright: 2006-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/advection-diffusion/cpp/main.cpp
-	demo/undocumented/aliev-panfilov/cpp/main.cpp
-	demo/undocumented/functional/cpp/main.cpp
-	demo/undocumented/stokes-stabilized/cpp/main.cpp
-	demo/undocumented/stokes-taylor-hood/cpp/main.cpp
-	dolfin/mesh/BoundaryComputation.cpp
-	dolfin/mesh/BoundaryComputation.h
-	dolfin/mesh/BoundaryMesh.cpp
-	dolfin/mesh/BoundaryMesh.h
-	dolfin/mesh/IntervalCell.cpp
-	dolfin/mesh/IntervalCell.h
-	dolfin/mesh/MeshEntityIterator.h
-	dolfin/mesh/Point.cpp
-	dolfin/mesh/Point.h
-	dolfin/mesh/TetrahedronCell.cpp
-	dolfin/mesh/TetrahedronCell.h
-	dolfin/mesh/TopologyComputation.cpp
-	dolfin/mesh/TriangleCell.h
-Copyright: 2006-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/function/evaluation/cpp/P1.ufl
-	demo/pde/cahn-hilliard/python/demo.py
-	demo/undocumented/advection-diffusion/cpp/Velocity.ufl
-	demo/undocumented/dg-advection-diffusion/cpp/Velocity.ufl
-	demo/undocumented/lift-drag/cpp/Pressure.ufl
-	demo/undocumented/nonmatching-interpolation/cpp/P1.ufl
-	demo/undocumented/nonmatching-interpolation/cpp/P3.ufl
-	demo/undocumented/nonmatching-interpolation/cpp/main.cpp
-	demo/undocumented/nonmatching-interpolation/python/demo.py
-	demo/undocumented/nonmatching-projection/cpp/P1_projection.ufl
-	demo/undocumented/nonmatching-projection/cpp/P3.ufl
-	demo/undocumented/nonmatching-projection/cpp/main.cpp
-	demo/undocumented/nonmatching-projection/python/demo.py
-	dolfin/io/Encoder.h
-	test/unit/fem/cpp/test.cpp
-	test/unit/fem/python/test.py
-Copyright: 2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: cmake/scripts/generate-cmakefiles
-	demo/undocumented/elastodynamics/python/demo.py
-	demo/undocumented/stokes-iterative/python/demo.py
-	dolfin/graph/GraphBuilder.cpp
-	dolfin/graph/GraphBuilder.h
-	dolfin/graph/SCOTCH.cpp
-	dolfin/graph/SCOTCH.h
-	dolfin/io/VTKWriter.cpp
-	dolfin/io/VTKWriter.h
-	dolfin/la/GenericLUSolver.h
-	dolfin/la/PETScPreconditioner.cpp
-	dolfin/la/PETScPreconditioner.h
-	dolfin/la/TrilinosPreconditioner.cpp
-	dolfin/la/TrilinosPreconditioner.h
-	dolfin/mesh/refine.cpp
-	dolfin/mesh/refine.h
-Copyright: 2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: cmake/scripts/generate-form-files
-	demo/pde/poisson/cpp/Poisson.ufl
-	demo/undocumented/neumann-poisson/cpp/Poisson.ufl
-	demo/undocumented/reaction/cpp/main.cpp
-	dolfin/la/PETScLUSolver.cpp
-	dolfin/mesh/Box.h
-	dolfin/mesh/Rectangle.cpp
-	dolfin/mesh/Rectangle.h
-	dolfin/mesh/UnitSquare.cpp
-	dolfin/mesh/UnitSquare.h
-	dolfin/ode/MonoAdaptiveJacobian.cpp
-	dolfin/ode/MonoAdaptiveNewtonSolver.cpp
-	dolfin/ode/MultiAdaptiveNewtonSolver.cpp
-	dolfin/ode/TimeSlab.h
-	dolfin/ode/TimeSlabSolver.cpp
-Copyright: 2005-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/pde/poisson/python/demo.py
-	demo/undocumented/refinement/python/demo.py
-	demo/undocumented/tensor-weighted-poisson/python/generate_data.py
-	dolfin/fem/Assembler.cpp
-	dolfin/fem/Assembler.h
-	dolfin/fem/AssemblerTools.cpp
-	dolfin/fem/AssemblerTools.h
-	dolfin/fem/UFCCell.h
-	dolfin/fem/assemble.cpp
-	dolfin/fem/assemble.h
-	dolfin/mesh/MeshOrdering.cpp
-	dolfin/plot/plot.cpp
-	dolfin/plot/plot.h
-	dolfin/swig/function_pre.i
-	test/test.py
-Copyright: 2007-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
+Files: *
+Copyright: 2002-2011, Anders Logg
+ 2005-2011, Garth N. Wells
+License: LGPL-3+
+
+Files: demo/la/eigenvalue/python/demo_eigenvalue.py
+ demo/pde/biharmonic/cpp/main.cpp
+ demo/pde/biharmonic/python/demo_biharmonic.py
+ demo/pde/mixed-poisson/python/demo_mixed-poisson.py
+ demo/undocumented/advection-diffusion/python/demo_advection-diffusion.py
+ demo/undocumented/aliev-panfilov/python/demo.py
+ demo/undocumented/built-in/cpp/main.cpp
+ demo/undocumented/conditional/cpp/Conditional.ufl
+ demo/undocumented/conditional/cpp/main.cpp
+ demo/undocumented/conditional/python/demo_conditional.py
+ demo/undocumented/dg-advection-diffusion/cpp/Projection.ufl
+ demo/undocumented/dg-poisson/python/demo_dg-poisson.py
+ demo/undocumented/elasticity/python/demo_elasticity.py
+ demo/undocumented/functional/python/demo_functional.py
+ demo/undocumented/lift-drag/python/demo_lift-drag.py
+ demo/undocumented/meshfunction/python/demo_meshfunction.py
+ demo/undocumented/nonlinear-poisson/python/demo_nonlinear-poisson.py
+ demo/undocumented/periodic/python/demo_periodic.py
+ demo/undocumented/poisson1D/cpp/Poisson.ufl
+ demo/undocumented/poisson1D/cpp/main.cpp
+ demo/undocumented/poisson1D/python/demo_poisson1D.py
+ demo/undocumented/quadrature/python/demo_quadrature.py
+ demo/undocumented/simple/python/demo_simple.py
+ demo/undocumented/spatial-coordinates/cpp/SpatialCoordinates.ufl
+ demo/undocumented/spatial-coordinates/cpp/main.cpp
+ demo/undocumented/spatial-coordinates/python/demo_spatial-coordinates.py
+ demo/undocumented/stokes-mini/python/demo_stokes-mini.py
+ demo/undocumented/stokes-stabilized/python/demo_stokes-stabilized.py
+ demo/undocumented/stokes-taylor-hood/python/demo_stokes-taylor-hood.py
+ demo/undocumented/subdomains/python/demo_subdomains.py
+ dolfin/mesh/Interval.cpp
+ dolfin/mesh/Interval.h
+ dolfin/mesh/PointCell.cpp
+ dolfin/mesh/PointCell.h
+ dolfin/mesh/UnitInterval.cpp
+ dolfin/mesh/UnitInterval.h
+ dolfin/swig/codeexamples.py
+ dolfin/swig/documentation.py
+Copyright: 2007-2010, Kristian B. Oelgaard
+License: LGPL-3+
+
+Files: bench/function/evaluation/cpp/main.cpp
+ demo/undocumented/distancequeries/cpp/main.cpp
+ demo/undocumented/entityintersection/cpp/main.cpp
+ demo/undocumented/entityintersection/python/demo_entityintersection.py
+ demo/undocumented/meshintersection/3D/python/demo_3D.py
+ dolfin/mesh/IntersectionOperator.cpp
+ dolfin/mesh/IntersectionOperator.h
+ dolfin/mesh/IntersectionOperatorImplementation.h
+ dolfin/mesh/MeshPrimitive.h
+ dolfin/mesh/Point_3_Bbox_3_intersection.h
+ dolfin/mesh/Point_3_Iso_Cuboid_3_intersection.h
+ dolfin/mesh/Point_3_Line_3_intersection.h
+ dolfin/mesh/Point_3_Point_3_intersection.h
+ dolfin/mesh/Point_3_Ray_3_intersection.h
+ dolfin/mesh/Point_3_Segment_3_intersection.h
+ dolfin/mesh/Point_3_Tetrahedron_3_intersection.h
+ dolfin/mesh/Point_3_Triangle_3_intersection.h
+ dolfin/mesh/PrimitiveIntersector.cpp
+ dolfin/mesh/PrimitiveIntersector.h
+ dolfin/mesh/PrimitiveTraits.h
+ dolfin/mesh/Segment_3_Segment_3_intersection.h
+ dolfin/mesh/Segment_3_Tetrahedron_3_intersection.h
+ dolfin/mesh/Tetrahedron_3_Bbox_3_intersection.h
+ dolfin/mesh/Tetrahedron_3_Tetrahedron_3_intersection.h
+ dolfin/mesh/Tree_Traits.h
+ dolfin/mesh/Triangle_3_Tetrahedron_3_do_intersect_SCK.cpp
+ dolfin/mesh/Triangle_3_Tetrahedron_3_do_intersect_SCK.h
+ dolfin/mesh/added_intersection_3.h
+ dolfin/mesh/cgal_includes.h
+ dolfin/quadrature/BarycenterQuadrature.cpp
+ dolfin/quadrature/BarycenterQuadrature.h
+ dolfin/swig/std_set_typemaps.i
+ test/unit/quadrature/cpp/test.cpp
+ test/unit/quadrature/python/test.py
+Copyright: 2009-2010, Andre Massing
+License: LGPL-3+
+
+Files: demo/undocumented/meshfunction/cpp/main.cpp
+ dolfin/io/XMLArray.cpp
+ dolfin/io/XMLArray.h
+ dolfin/io/XMLDolfin.cpp
+ dolfin/io/XMLDolfin.h
+ dolfin/io/XMLFile.cpp
+ dolfin/io/XMLFile.h
+ dolfin/io/XMLFunctionPlotData.cpp
+ dolfin/io/XMLHandler.cpp
+ dolfin/io/XMLHandler.h
+ dolfin/io/XMLIndent.cpp
+ dolfin/io/XMLIndent.h
+ dolfin/io/XMLLocalMeshData.cpp
+ dolfin/io/XMLLocalMeshData.h
+ dolfin/io/XMLMap.cpp
+ dolfin/io/XMLMap.h
+ dolfin/io/XMLMeshData.cpp
+ dolfin/io/XMLMeshData.h
+ dolfin/io/XMLMeshFunction.cpp
+ dolfin/io/XMLMeshFunction.h
+ dolfin/io/XMLSkipper.cpp
+ dolfin/io/XMLSkipper.h
+ dolfin/io/XMLVectorMapping.cpp
+ dolfin/io/XMLVectorMapping.h
+ dolfin/la/GenericSparsityPattern.h
+ dolfin/la/LinearAlgebraFactory.h
+ dolfin/la/PETScFactory.cpp
+ dolfin/la/PETScFactory.h
+ dolfin/la/uBLASFactory.h
+ dolfin/mesh/LocalMeshData.cpp
+ dolfin/mesh/LocalMeshData.h
+ dolfin/mesh/MeshFunction.cpp
+ dolfin/swig/exceptions.i
+ dolfin/swig/numpy_typemaps.i
+Copyright: 2005-2009, Ola Skavhaug
+License: LGPL-3+
+
+Files: bench/function/extrapolation/python/bench
+ demo/undocumented/auto-adaptive-navier-stokes/cpp/AdaptiveNavierStokes.ufl
+ demo/undocumented/auto-adaptive-navier-stokes/cpp/main.cpp
+ demo/undocumented/auto-adaptive-navier-stokes/python/demo_auto-adaptive-navier-stokes.py
+ demo/undocumented/extrapolation/python/demo2.py
+ demo/undocumented/meshfunction-refinement/cpp/main.cpp
+ demo/undocumented/neumann-poisson/cpp/main.cpp
+ demo/undocumented/neumann-poisson/python/demo_neumann-poisson.py
+ dolfin/adaptivity/AdaptiveDatum.cpp
+ dolfin/adaptivity/AdaptiveDatum.h
+ dolfin/adaptivity/AdaptiveVariationalSolver.cpp
+ dolfin/adaptivity/AdaptiveVariationalSolver.h
+ dolfin/adaptivity/ErrorControl.cpp
+ dolfin/adaptivity/ErrorControl.h
+ dolfin/adaptivity/GoalFunctional.cpp
+ dolfin/adaptivity/GoalFunctional.h
+ dolfin/adaptivity/LocalAssembler.cpp
+ dolfin/adaptivity/LocalAssembler.h
+ dolfin/adaptivity/SpecialFacetFunction.cpp
+ dolfin/adaptivity/SpecialFacetFunction.h
+ dolfin/adaptivity/marking.cpp
+ dolfin/adaptivity/marking.h
+ dolfin/swig/adaptivity_pre.i
+ site-packages/dolfin_utils/wrappers/form.py
+ site-packages/dolfin_utils/wrappers/functionspace.py
+ site-packages/dolfin_utils/wrappers/goalfunctional.py
+ site-packages/dolfin_utils/wrappers/wrappers.py
+ test/unit/adaptivity/python/errorcontrol.py
+Copyright: 2010-2011, Marie E. Rognes
+License: LGPL-3+
+
+Files: bench/fem/speedup/cpp/submit-bench
+ demo/undocumented/dg-advection-diffusion/python/demo_dg-advection-diffusion.py
+ dolfin/swig/Indices.i
+ dolfin/swig/array_typemaps.i
+ dolfin/swig/common_pre.i
+ dolfin/swig/defines.i
+ dolfin/swig/fem_post.i
+ dolfin/swig/function_post.i
+ dolfin/swig/la_get_set_items.i
+ dolfin/swig/log_post.i
+ dolfin/swig/log_pre.i
+ dolfin/swig/nls_pre.i
+ dolfin/swig/ode_pre.i
+ dolfin/swig/parameter_post.i
+ dolfin/swig/parameter_pre.i
+ dolfin/swig/shared_ptr_classes.i
+ dolfin/swig/std_pair_typemaps.i
+ dolfin/swig/std_vector_typemaps.i
+ dolfin/swig/version.i
+ site-packages/dolfin/compilemodules/compilemodule.py
+ site-packages/dolfin/compilemodules/jit.py
+ site-packages/dolfin/fem/form.py
+ site-packages/dolfin/functions/expression.py
+ site-packages/dolfin/functions/function.py
+ site-packages/dolfin/functions/functionspace.py
+ test/unit/la/cpp/test.cpp
+ test/unit/la/python/test.py
+Copyright: 2005-2011, Johan Hake
+License: LGPL-3+
 
 Files: demo/undocumented/block-matrix/cpp/main.cpp
-	demo/undocumented/block-matrix/python/demo.py
-	demo/undocumented/restriction/python/demo.py
-	demo/undocumented/sym-dirichlet-bc/python/demo.py
-	demo/undocumented/sym-dirichlet-bc/python/dg-demo.py
-	demo/undocumented/sym-dirichlet-bc/python/dg-speed-up-test.py
-	demo/undocumented/sym-dirichlet-bc/python/speed-up-test.py
-	dolfin/la/BlockMatrix.cpp
-	dolfin/la/BlockMatrix.h
-	dolfin/la/BlockVector.cpp
-	dolfin/la/BlockVector.h
-	dolfin/la/EpetraKrylovSolver.cpp
-	dolfin/la/EpetraKrylovSolver.h
-	site-packages/dolfin/mesh/boundarysubdomainfinder.py
-	test/unit/restriction/python/test.py
-Copyright: 2008, Kent-Andre Mardal <kent-and at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/uBLASDummyPreconditioner.cpp
-	dolfin/la/uBLASDummyPreconditioner.h
-	dolfin/la/uBLASKrylovMatrix.cpp
-	dolfin/la/uBLASKrylovMatrix.h
-	dolfin/mesh/Edge.cpp
-	dolfin/mesh/Face.cpp
-	dolfin/mesh/Facet.cpp
-	dolfin/mesh/MeshGeometry.cpp
-	dolfin/mesh/MeshGeometry.h
-	dolfin/mesh/TopologyComputation.h
-	site-packages/dolfin/mesh/meshconvert.py
-	test/unit/mesh/python/test.py
-	utils/convert/dolfin-convert
-	utils/xml/convertall
-Copyright: 2006, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/fem/assembly/cpp/forms.h
-	dolfin/common/real.h
-	dolfin/function/CoefficientAssigner.cpp
-	dolfin/function/CoefficientAssigner.h
-	dolfin/function/FunctionSpace.cpp
-	dolfin/function/FunctionSpace.h
-	dolfin/la/SingularSolver.cpp
-	dolfin/log/Table.cpp
-	dolfin/log/Table.h
-	dolfin/mesh/MeshData.cpp
-	dolfin/mesh/MeshData.h
-	site-packages/dolfin/fem/project.py
-	site-packages/dolfin/function/constant.py
-	site-packages/dolfin/function/specialfunctions.py
-Copyright: 2008-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/lorenz/cpp/main.cpp
-	demo/undocumented/stiff/cpp/TestProblem3.h
-	demo/undocumented/stiff/cpp/TestProblem7.h
-	dolfin/math/Lagrange.cpp
-	dolfin/math/Legendre.cpp
-	dolfin/ode/Dependencies.cpp
-	dolfin/ode/Dependencies.h
-	dolfin/ode/Dual.cpp
-	dolfin/ode/Dual.h
-	dolfin/ode/cGqMethod.cpp
-	dolfin/ode/cGqMethod.h
-	dolfin/ode/dGqMethod.cpp
-	dolfin/quadrature/GaussQuadrature.cpp
-Copyright: 2003-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/fem/speedup/cpp/submit-bench
-	dolfin/swig/Indices.i
-	dolfin/swig/array_typemaps.i
-	dolfin/swig/common_pre.i
-	dolfin/swig/defines.i
-	dolfin/swig/fem_post.i
-	dolfin/swig/la_get_set_items.i
-	dolfin/swig/log_post.i
-	dolfin/swig/log_pre.i
-	dolfin/swig/nls_pre.i
-	dolfin/swig/std_vector_typemaps.i
-	site-packages/dolfin/compilemodules/__init__.py
-	site-packages/dolfin/function/function.py
-Copyright: 2009, Johan Hake <hake at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/common/Variable.cpp
-	dolfin/common/Variable.h
-	dolfin/function/Function.cpp
-	dolfin/function/Function.h
-	dolfin/log/LogStream.h
-	dolfin/log/Logger.cpp
-	dolfin/log/Logger.h
-	dolfin/log/log.cpp
-	dolfin/math/Legendre.h
-	dolfin/quadrature/GaussQuadrature.h
-	dolfin/quadrature/LobattoQuadrature.h
-	dolfin/quadrature/RadauQuadrature.h
-Copyright: 2003-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/mesh/iteration/cpp/main.cpp
-	bench/mesh/refinement/cpp/main.cpp
-	bench/mesh/unitcube/cpp/main.cpp
-	demo/pde/mixed-poisson/cpp/MixedPoisson.ufl
-	dolfin/mesh/Cell.h
-	dolfin/mesh/Edge.h
-	dolfin/mesh/Face.h
-	dolfin/mesh/Facet.h
-	dolfin/mesh/TriangleCell.cpp
-	dolfin/mesh/UniformMeshRefinement.cpp
-	dolfin/mesh/UniformMeshRefinement.h
-	dolfin/mesh/Vertex.h
-Copyright: 2006-2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/bench.py
-	bench/la/vector/access/cpp/main.cpp
-	demo/pde/navier-stokes/cpp/PressureUpdate.ufl
-	demo/pde/navier-stokes/cpp/TentativeVelocity.ufl
-	demo/pde/navier-stokes/cpp/VelocityUpdate.ufl
-	demo/pde/navier-stokes/cpp/main.cpp
-	demo/undocumented/extrapolation/cpp/main.cpp
-	dolfin/la/GenericMatrix.cpp
-	dolfin/mesh/FacetCell.cpp
-	dolfin/mesh/FacetCell.h
-	site-packages/dolfin/mesh/meshfunction.py
-Copyright: 2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/method-weights/cpp/main.cpp
-	demo/undocumented/quadrature/cpp/main.cpp
-	dolfin/log/LogManager.cpp
-	dolfin/math/Lagrange.h
-	dolfin/math/basic.cpp
-	dolfin/math/basic.h
-	dolfin/ode/Method.cpp
-	dolfin/ode/Sample.cpp
-	dolfin/ode/Sample.h
-	dolfin/quadrature/GaussianQuadrature.h
-Copyright: 2003-2005, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/lift-drag/cpp/Drag.ufl
-	demo/undocumented/lift-drag/cpp/Lift.ufl
-	demo/undocumented/periodic/cpp/Poisson.ufl
-	dolfin/common/unittest.h
-	dolfin/fem/UFCMesh.h
-	dolfin/swig/generate.py
-	test/unit/function/cpp/test.cpp
-	test/unit/function/python/test.py
-	test/unit/io/python/test.py
-	test/unit/mesh/cpp/test.cpp
-Copyright: 2007, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/main/init.h
-	dolfin/ode/Adaptivity.h
-	dolfin/ode/Controller.cpp
-	dolfin/ode/Controller.h
-	dolfin/ode/MonoAdaptivity.h
-	dolfin/ode/TimeSlabSolver.h
-	utils/matlab/meshindex.m
-	utils/matlab/plotcontroller.m
-	utils/system/monitor
-Copyright: 2005, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: site-packages/dolfin/adaptivity/dual.py
-	site-packages/dolfin/adaptivity/errorestimator.py
-	site-packages/dolfin/adaptivity/errorestimators.py
-	site-packages/dolfin/adaptivity/formmanipulation.py
-	site-packages/dolfin/adaptivity/marking.py
-	site-packages/dolfin/adaptivity/normestimators.py
-	site-packages/dolfin/adaptivity/residual.py
-	site-packages/dolfin/adaptivity/specialfunctions.py
-Copyright: 2009, Marie E. Rognes <meg at simula.no>
-License: GPL-3+
-
-Files: demo/undocumented/stiff/cpp/TestProblem9.h
-	demo/undocumented/stiff/cpp/main.cpp
-	dolfin/io/XMLObject.h
-	dolfin/ode/dGqMethod.h
-	dolfin/quadrature/LobattoQuadrature.cpp
-	dolfin/quadrature/Quadrature.cpp
-	dolfin/quadrature/Quadrature.h
-	dolfin/quadrature/RadauQuadrature.cpp
-Copyright: 2003-2006, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/mesh/LocalMeshCoarsening.cpp
-	dolfin/mesh/LocalMeshCoarsening.h
-	dolfin/mesh/LocalMeshRefinement.cpp
-	dolfin/mesh/LocalMeshRefinement.h
-	dolfin/mesh/MeshHierarchy.cpp
-	dolfin/mesh/MeshHierarchy.h
-	dolfin/mesh/MeshHierarchyAlgorithms.cpp
-	dolfin/mesh/MeshHierarchyAlgorithms.h
-Copyright: 2006, Johan Hoffman <hoffman at csc.kth.se>
-License: LGPL-2.1
-
-Files: dolfin/la/GenericMatrix.h
-	dolfin/la/GenericVector.h
-	dolfin/la/uBLASILUPreconditioner.cpp
-	dolfin/la/uBLASILUPreconditioner.h
-	dolfin/la/uBLASKrylovSolver.cpp
-	dolfin/la/uBLASKrylovSolver.h
-	dolfin/la/uBLASMatrix.h
-	dolfin/la/uBLASPreconditioner.h
-Copyright: 2006-2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
+ demo/undocumented/block-matrix/python/demo_block-matrix.py
+ demo/undocumented/restriction/python/demo_restriction.py
+ demo/undocumented/sym-dirichlet-bc/python/demo_sym-dirichlet-bc.py
+ demo/undocumented/sym-dirichlet-bc/python/dg-demo.py
+ demo/undocumented/sym-dirichlet-bc/python/dg-speed-up-test.py
+ demo/undocumented/sym-dirichlet-bc/python/speed-up-test.py
+ demo/undocumented/trilinos/python/demo2.py
+ demo/undocumented/trilinos/python/demo_trilinos.py
+ dolfin/la/BlockMatrix.cpp
+ dolfin/la/BlockMatrix.h
+ dolfin/la/BlockVector.cpp
+ dolfin/la/BlockVector.h
+ dolfin/la/EpetraKrylovSolver.cpp
+ dolfin/la/EpetraKrylovSolver.h
+ site-packages/dolfin/mesh/boundarysubdomainfinder.py
+ test/unit/restriction/python/test.py
+Copyright: 2008, Kent-Andre Mardal
+License: LGPL-3+
+
+Files: demo/undocumented/elasticity/cpp/Elasticity.ufl
+ demo/undocumented/stiff/cpp/TestProblem8.h
+ dolfin/la/PETScKrylovSolver.cpp
+ dolfin/la/PETScKrylovSolver.h
+ dolfin/la/PETScUserPreconditioner.cpp
+ dolfin/la/PETScUserPreconditioner.h
+ dolfin/refinement/RivaraRefinement.cpp
+ dolfin/refinement/RivaraRefinement.h
+ dolfin/swig/dolfin.i
+ dolfin/swig/la_pre.i
+ utils/octave/pdemesh.m
+ utils/octave/pdeplot.m
+ utils/octave/pdesurf.m
+Copyright: 2003-2009, Johan Jansson
+License: LGPL-3+
+
+Files: dolfin/fem/DofMapBuilder.cpp
+ dolfin/fem/DofMapBuilder.h
+ dolfin/io/XMLFunctionPlotData.h
+ dolfin/io/XMLMesh.cpp
+ dolfin/io/XMLMesh.h
+ dolfin/io/XMLVector.cpp
+ dolfin/io/XMLVector.h
+ dolfin/ode/ODECollection.cpp
+ dolfin/ode/ODECollection.h
+Copyright: 2002-2009, Anders Logg
+ 2002-2009, Ola Skavhaug
+License: LGPL-3+
+
+Files: demo/undocumented/elasticity/cpp/main.cpp
+ dolfin/ode/ODE.cpp
+ dolfin/ode/ODE.h
+ dolfin/ode/ODESolver.cpp
+ dolfin/ode/ODESolver.h
+ dolfin/ode/Partition.cpp
+ dolfin/ode/Partition.h
+ dolfin/ode/TimeStepper.cpp
+ dolfin/ode/TimeStepper.h
+Copyright: 2003-2011, Johan Jansson
+ 2003-2011, Anders Logg
+License: LGPL-3+
+
+Files: dolfin/mesh/MeshHierarchy.cpp
+ dolfin/mesh/MeshHierarchy.h
+ dolfin/mesh/MeshHierarchyAlgorithms.cpp
+ dolfin/mesh/MeshHierarchyAlgorithms.h
+ dolfin/refinement/BisectionRefinement.cpp
+ dolfin/refinement/BisectionRefinement.h
+ dolfin/refinement/LocalMeshCoarsening.cpp
+ dolfin/refinement/LocalMeshCoarsening.h
+Copyright: 2006, Johan Hoffman
+License: LGPL-3+
 
 Files: dolfin/la/EpetraFactory.cpp
-	dolfin/la/EpetraFactory.h
-	dolfin/la/EpetraMatrix.cpp
-	dolfin/la/EpetraMatrix.h
-	dolfin/la/EpetraSparsityPattern.cpp
-	dolfin/la/EpetraSparsityPattern.h
-	dolfin/la/EpetraVector.cpp
-	dolfin/la/EpetraVector.h
-Copyright: 2008, Martin Sandve Alnes <martinal at simula.no>
-	   2008, Kent-Andre Mardal <kent-and at simula.no>
-	   2008, Johannes Ring <johannr at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/advection-diffusion/cpp/AdvectionDiffusion.ufl
-	demo/undocumented/plot/cpp/main.cpp
-	demo/undocumented/sym-dirichlet-bc/cpp/main.cpp
-	dolfin/mesh/MeshConnectivity.cpp
-	dolfin/mesh/MeshConnectivity.h
-	dolfin/mesh/MeshEntityIterator.cpp
-	test/unit/test.py
-Copyright: 2006-2007, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/fem/speedup/cpp/bench
-	demo/pde/navier-stokes/python/demo.py
-	demo/undocumented/extrapolation/python/demo.py
-	demo/undocumented/interpolation/python/demo.py
-	demo/undocumented/smoothing/python/demo.py
-	site-packages/dolfin/common/memory.py
-Copyright: 2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/extrapolation/python/demo2.py
-Copyright: 2010, Marie E. Rognes <meg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/ode/ODE.cpp
-	dolfin/ode/ODE.h
-	dolfin/ode/ODESolver.cpp
-	dolfin/ode/ODESolver.h
-	dolfin/ode/TimeStepper.cpp
-	dolfin/ode/TimeStepper.h
-Copyright: 2003-2009, Johan Jansson <johanjan at math.chalmers.se>
-	   2003-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
+ dolfin/la/EpetraFactory.h
+ dolfin/la/EpetraMatrix.cpp
+ dolfin/la/EpetraMatrix.h
+ dolfin/la/EpetraSparsityPattern.cpp
+ dolfin/la/EpetraSparsityPattern.h
+ dolfin/la/EpetraVector.cpp
+ dolfin/la/EpetraVector.h
+Copyright: 2008, Martin Sandve Alnes
+ 2008, Kent-Andre Mardal
+ 2008, Johannes Ring
+License: LGPL-3+
+
+Files: dolfin/common/real.cpp
+ dolfin/la/HighPrecision.cpp
+ dolfin/la/HighPrecision.h
+ dolfin/ode/ODESolution.cpp
+ dolfin/ode/ODESolution.h
+ dolfin/ode/StabilityAnalysis.cpp
+ dolfin/ode/StabilityAnalysis.h
+Copyright: 2008-2011, Benjamin Kehlet
+License: LGPL-3+
+
+Files: demo/undocumented/simple/cpp/main.cpp
+ dolfin/io/File.cpp
+ dolfin/io/File.h
+ dolfin/io/GenericFile.cpp
+ dolfin/io/GenericFile.h
+ dolfin/io/PythonFile.cpp
+ dolfin/io/PythonFile.h
+Copyright: 2002-2009, Johan Hoffman
+ 2002-2009, Anders Logg
+License: LGPL-3+
+
+Files: demo/undocumented/ale/cpp/main.cpp
+ demo/undocumented/ale/python/demo_ale.py
+ dolfin/ale/ALE.cpp
+ dolfin/ale/ALE.h
+ dolfin/ale/ALEType.h
+ dolfin/ale/TransfiniteInterpolation.cpp
+ dolfin/ale/TransfiniteInterpolation.h
+Copyright: 2008-2009, Solveig Bruvoll
+ 2008-2009, Anders Logg
+License: LGPL-3+
+
+Files: demo/undocumented/curl-curl/cpp/CurrentDensity.ufl
+ demo/undocumented/curl-curl/cpp/EddyCurrents.ufl
+ demo/undocumented/curl-curl/cpp/main.cpp
+ demo/undocumented/curl-curl/python/demo_curl-curl.py
+ dolfin/fem/EqualityBC.cpp
+ dolfin/fem/EqualityBC.h
+Copyright: 2009, Bartosz Sawicki
+License: LGPL-3+
 
 Files: dolfin/la/MTL4Factory.cpp
-	dolfin/la/MTL4Factory.h
-	dolfin/la/MTL4Matrix.cpp
-	dolfin/la/MTL4Matrix.h
-	dolfin/la/MTL4Vector.cpp
-	dolfin/la/MTL4Vector.h
-Copyright: 2008, Dag Lindbo <dag at csc.kth.se>
-License: LGPL-2.1
-
-Files: demo/undocumented/curl-curl/cpp/CurrentDensity.ufl
-	demo/undocumented/curl-curl/cpp/EddyCurrents.ufl
-	demo/undocumented/curl-curl/cpp/main.cpp
-	demo/undocumented/curl-curl/python/demo.py
-	dolfin/fem/EqualityBC.cpp
-	dolfin/fem/EqualityBC.h
-Copyright: 2009, Bartosz Sawicki
-License: LGPL-2.1
-
-Files: demo/pde/cahn-hilliard/cpp/main.cpp
-	dolfin/io/RAWFile.cpp
-	dolfin/io/RAWFile.h
-	dolfin/io/XYZFile.cpp
-	dolfin/io/XYZFile.h
-Copyright: 2005-2007, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/common/real.cpp
-	dolfin/ode/ODESolution.cpp
-	dolfin/ode/ODESolution.h
-	dolfin/ode/SORSolver.cpp
-	dolfin/ode/SORSolver.h
-Copyright: 2008, Benjamin Kehlet <benjamik at student.matnat.uio.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/built-in/python/demo.py
-	dolfin/common/NoDeleter.h
-	dolfin/la/PETScObject.h
-	dolfin/main/SubSystemsManager.cpp
-	dolfin/main/SubSystemsManager.h
-Copyright: 2008, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/ale/cpp/main.cpp
-	dolfin/ale/ALE.cpp
-	dolfin/ale/ALE.h
-	dolfin/ale/TransfiniteInterpolation.cpp
-	dolfin/ale/TransfiniteInterpolation.h
-Copyright: 2008-2009, Solveig Bruvoll <solveio at ifi.uio.no>
-	   2008-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/io/XMLFunctionPlotData.h
-	dolfin/io/XMLMesh.cpp
-	dolfin/io/XMLMesh.h
-	dolfin/ode/ODECollection.cpp
-	dolfin/ode/ODECollection.h
-Copyright: 2009, Anders Logg <logg at simula.no>
-	   2009, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/adaptive-pde/energy-norm-poisson.py
-	demo/undocumented/adaptive-pde/poisson.py
-	site-packages/dolfin/adaptivity/adaptivedata.py
-	site-packages/dolfin/adaptivity/updates.py
-Copyright: 2010, Marie E. Rognes <meg at simula.no>
-License: GPL-3+
-
-Files: dolfin/la/PETScKrylovSolver.h
-	utils/octave/pdemesh.m
-	utils/octave/pdeplot.m
-	utils/octave/pdesurf.m
-Copyright: 2004-2005, Johan Jansson <johanjan at math.chalmers.se>
-License: LGPL-2.1
-
-Files: demo/undocumented/stiff/cpp/TestProblem1.h
-	demo/undocumented/stiff/cpp/TestProblem4.h
-	demo/undocumented/stiff/cpp/TestProblem5.h
-	demo/undocumented/stiff/cpp/TestProblem6.h
-Copyright: 2004-2006, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/elasticity/cpp/Elasticity.ufl
-	dolfin/la/PETScKrylovSolver.cpp
-	dolfin/la/PETScUserPreconditioner.cpp
-	dolfin/la/PETScUserPreconditioner.h
-Copyright: 2005, Johan Jansson <johanjan at math.chalmers.se>
-License: LGPL-2.1
-
-Files: demo/undocumented/equality/cpp/Poisson.ufl
-	demo/undocumented/stokes-stabilized/cpp/Stokes.ufl
-	demo/undocumented/stokes-taylor-hood/cpp/Stokes.ufl
-	demo/undocumented/sym-dirichlet-bc/cpp/Poisson.ufl
-Copyright: 2005-2007, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/la/vector/assignment/cpp/main.cpp
-	dolfin/la/uBLASDenseMatrix.h
-	dolfin/la/uBLASSparseMatrix.h
-	dolfin/la/ublas.h
-Copyright: 2006, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/GenericSparsityPattern.h
-	dolfin/la/LinearAlgebraFactory.h
-	dolfin/la/PETScFactory.h
-	dolfin/la/uBLASFactory.h
-Copyright: 2007, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/SparsityPatternBuilder.cpp
-	dolfin/la/KrylovSolver.h
-	dolfin/la/SparsityPattern.cpp
-	dolfin/la/SparsityPattern.h
-Copyright: 2007-2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/dg-advection-diffusion/python/demo.py
-	site-packages/dolfin/fem/form.py
-	site-packages/dolfin/function/functionspace.py
-	test/unit/la/python/test.py
-Copyright: 2008, Johan Hake <hake at simula.no>
-License: LGPL-2.1
+ dolfin/la/MTL4Factory.h
+ dolfin/la/MTL4Matrix.cpp
+ dolfin/la/MTL4Matrix.h
+ dolfin/la/MTL4Vector.cpp
+ dolfin/la/MTL4Vector.h
+Copyright: 2008, Dag Lindbo
+License: LGPL-3+
+
+Files: demo/undocumented/partitioning/cpp/main.cpp
+ demo/undocumented/partitioning/python/demo_partitioning.py
+ dolfin/io/XMLMatrix.cpp
+ dolfin/io/XMLMatrix.h
+ dolfin/io/XMLParameters.cpp
+ dolfin/io/XMLParameters.h
+Copyright: 2004-2011, Ola Skavhaug
+ 2004-2011, Anders Logg
+License: LGPL-3+
+
+Files: bench/fem/assembly/python/broken
+ dolfin/la/STLFactory.cpp
+ dolfin/la/STLFactory.h
+ test/memory/test.py
+ test/regression/test.py
+Copyright: 2007-2008, Ilmar Wilbers
+License: LGPL-3+
+
+Files: demo/pde/mixed-poisson/cpp/MixedPoisson.ufl
+ demo/pde/mixed-poisson/cpp/main.cpp
+ demo/undocumented/auto-adaptive-poisson/cpp/AdaptivePoisson.ufl
+ demo/undocumented/auto-adaptive-poisson/cpp/main.cpp
+Copyright: 2006-2010, Anders Logg
+ 2006-2010, Marie E. Rognes
+License: LGPL-3+
+
+Files: demo/undocumented/waveguide/cpp/Forms.py
+ demo/undocumented/waveguide/cpp/Forms.ufl
+ demo/undocumented/waveguide/cpp/main.cpp
+ demo/undocumented/waveguide/python/demo_waveguide.py
+Copyright: 2008, Evan Lezar
+License: LGPL-3+
+
+Files: dolfin/la/PETScMatrix.cpp
+ dolfin/la/PETScMatrix.h
+ dolfin/la/PETScVector.cpp
+ dolfin/la/PETScVector.h
+Copyright: 2004-2010, Johan Hoffman
+ 2004-2010, Johan Jansson
+ 2004-2010, Anders Logg
+License: LGPL-3+
+
+Files: dolfin/fem/SystemAssembler.cpp
+ dolfin/fem/SystemAssembler.h
+ dolfin/la/EpetraLUSolver.cpp
+ dolfin/la/EpetraLUSolver.h
+Copyright: 2008-2010, Kent-Andre Mardal
+ 2008-2010, Garth N. Wells
+License: LGPL-3+
+
+Files: site-packages/dolfin/compilemodules/expressions.py
+ site-packages/dolfin/compilemodules/subdomains.py
+ site-packages/dolfin_utils/pjobs/pjobs.py
+ site-packages/dolfin_utils/wrappers/capsules.py
+Copyright: 2008-2009, Martin Sandve Alnes
+License: LGPL-3+
 
 Files: dolfin/graph/ParMETIS.cpp
-	dolfin/graph/ParMETIS.h
-	dolfin/mesh/MeshPartitioning.cpp
-	dolfin/mesh/MeshPartitioning.h
-Copyright: 2008-2009, Niclas Jansson <njansson at kth.se>
-	   2008-2009, Ola Skavhaug <skavhaug at simula.no>
-	   2008-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/conditional/cpp/Conditional.ufl
-	demo/undocumented/conditional/cpp/main.cpp
-	demo/undocumented/spatial-coordinates/cpp/SpatialCoordinates.ufl
-Copyright: 2010, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: GPL-3+
-
-Files: demo/undocumented/simple/cpp/main.cpp
-	dolfin/io/PythonFile.cpp
-	dolfin/io/PythonFile.h
-Copyright: 2003-2005, Johan Hoffman <hoffman at csc.kth.se>
-	   2003-2005, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/log/LogManager.h
-	dolfin/log/LogStream.cpp
-	dolfin/quadrature/GaussianQuadrature.cpp
-Copyright: 2003-2007, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/log/Event.cpp
-	dolfin/ode/Alloc.cpp
-	dolfin/ode/Alloc.h
-Copyright: 2004-2005, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/nls/NewtonSolver.cpp
-	dolfin/nls/NewtonSolver.h
-	dolfin/nls/NonlinearProblem.h
-Copyright: 2005-2008, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/UmfpackLUSolver.cpp
-	dolfin/la/uBLASVector.cpp
-	dolfin/la/uBLASVector.h
-Copyright: 2006-2008, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/swig/parameter_post.i
-	dolfin/swig/parameter_pre.i
-	dolfin/swig/swig_version.i
-Copyright: 2006-2009, Johan Hake <hake at simula.no>
-License: LGPL-2.1
-
-Files: demo/pde/cahn-hilliard/cpp/CahnHilliard2D.ufl
-	demo/pde/cahn-hilliard/cpp/CahnHilliard3D.ufl
-	dolfin/la/UmfpackLUSolver.h
-Copyright: 2006-2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/main/MPI.cpp
-	dolfin/main/MPI.h
-	test/unit/io/cpp/test.cpp
-Copyright: 2007, Gustav Magnus Vikstrom <gustavv at ifi.uio.no>
-License: LGPL-2.1
-
-Files: bench/fem/assembly/python/broken
-	test/memory/test.py
-	test/regression/test.py
-Copyright: 2008, Ilmar Wilbers <ilmarw at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/io/XMLLocalMeshData.cpp
-	dolfin/mesh/LocalMeshData.cpp
-	dolfin/mesh/LocalMeshData.h
-Copyright: 2008, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/adaptive-poisson/python/demo.py
-	demo/undocumented/lorenz/python/demo.py
-	demo/undocumented/lorenz/python/plot.py
-Copyright: 2008, Rolv Erlend Bredesen <rolv at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/FiniteElement.h
-	dolfin/fem/VariationalProblem.cpp
-	dolfin/fem/VariationalProblem.h
-Copyright: 2008-2009, Anders Logg <logg at simula.no>
-	   2008-2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/pde/biharmonic/cpp/main.cpp
-	demo/pde/biharmonic/python/demo.py
-	demo/undocumented/built-in/cpp/main.cpp
-Copyright: 2009, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
+ dolfin/graph/ParMETIS.h
+ dolfin/mesh/MeshPartitioning.cpp
+ dolfin/mesh/MeshPartitioning.h
+Copyright: 2008-2009, Niclas Jansson
+ 2008-2009, Ola Skavhaug
+ 2008-2009, Anders Logg
+License: LGPL-3+
+
+Files: dolfin/common/MPI.cpp
+ dolfin/common/MPI.h
+ test/unit/io/cpp/test.cpp
+Copyright: 2007, Magnus Vikstrøm
+License: LGPL-3+
 
 Files: demo/undocumented/elastodynamics/cpp/DG0_eps_xx.ufl
-	demo/undocumented/elastodynamics/cpp/ElastoDynamics.ufl
-	demo/undocumented/elastodynamics/cpp/main.cpp
+ demo/undocumented/elastodynamics/cpp/ElastoDynamics.ufl
+ demo/undocumented/elastodynamics/cpp/main.cpp
 Copyright: 2009, Mirko Maraldi
-	   2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/io/XMLMatrix.cpp
-	dolfin/io/XMLMatrix.h
-	dolfin/io/XMLParameters.h
-Copyright: 2009, Ola Skavhaug <skavhaug at simula.no>
-	   2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/spatial-coordinates/cpp/main.cpp
-	demo/undocumented/spatial-coordinates/python/demo.py
-	dolfin/swig/documentation.py
-Copyright: 2010, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
-
-Files: bench/function/extrapolation/python/bench
-	demo/undocumented/neumann-poisson/cpp/main.cpp
-	demo/undocumented/neumann-poisson/python/demo.py
-Copyright: 2010, Marie E. Rognes <meg at simula.no>
-License: LGPL-2.1
-
-Files: site-packages/dolfin/adaptivity/adaptive.py
-	site-packages/dolfin/adaptivity/utils.py
-Copyright: 2009-2010, Marie E. Rognes <meg at simula.no>
-License: GPL-3+
-
-Files: demo/undocumented/adaptive-pde/mixed-poisson.py
-	demo/undocumented/adaptive-pde/navier-stokes.py
-Copyright: 2010, Marie Rognes <meg at math.uio.no>
-License: GPL-3+
-
-Files: demo/undocumented/dielectric/python/demo.py
-Copyright: Kristen Kaasbjerg <cosby at fys.ku.dk>
-License: LGPL-2.1
-
-Files: dolfin/io/File.h
-	dolfin/io/GenericFile.cpp
-Copyright: 2002-2008, Johan Hoffman <hoffman at csc.kth.se>
-	   2002-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/common/timing.cpp
-	dolfin/log/Progress.cpp
-Copyright: 2003-2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
+ 2009, Garth N. Wells
+License: LGPL-3+
+
+Files: demo/undocumented/adaptive-poisson/python/demo_adaptive-poisson.py
+ demo/undocumented/lorenz/python/demo.py
+ demo/undocumented/lorenz/python/plot.py
+Copyright: 2008, Rolv Erlend Bredesen
+License: LGPL-3+
+
+Files: dolfin/log/Progress.h
+ dolfin/log/log.h
+Copyright: 2003-2011, Anders Logg
+ 2003-2011, Jim Tilander
+License: LGPL-3+
+
+Files: dolfin/la/CholmodCholeskySolver.cpp
+ dolfin/la/CholmodCholeskySolver.h
+Copyright: 2008, Dag Lindbo
+ 2008, Garth N. Wells
+License: LGPL-3+
 
 Files: utils/matlab/xmlmatrix.m
-	utils/matlab/xmlvector.m
+ utils/matlab/xmlvector.m
 Copyright: 2004, Georgios Foufas
-License: LGPL-2.1
-
-Files: dolfin/la/PETScMatrix.cpp
-	dolfin/la/PETScVector.h
-Copyright: 2004-2008, Johan Hoffman <hoffman at csc.kth.se>
-	   2004-2008, Johan Jansson <johanjan at math.chalmers.se>
-	   2004-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/swig/ode_pre.i
-	dolfin/swig/shared_ptr_classes.i
-Copyright: 2005-2006, Johan Hake <hake at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/io/VTKFile.cpp
-	dolfin/io/VTKFile.h
-Copyright: 2005-2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: bench/fem/convergence/cpp/main.cpp
-	dolfin/common/timing.h
-Copyright: 2005-2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/SLEPcEigenSolver.cpp
-	dolfin/la/SLEPcEigenSolver.h
-Copyright: 2005-2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/meshfunction/cpp/main.cpp
-	dolfin/io/XMLLocalMeshData.h
-Copyright: 2006, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/SparsityPatternBuilder.h
-	dolfin/la/Vector.h
-Copyright: 2007, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/STLFactory.cpp
-	dolfin/la/STLFactory.h
-Copyright: 2007, Ilmar Wilbers <ilmarw at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/DirichletBC.cpp
-	dolfin/fem/DirichletBC.h
-Copyright: 2007-2008, Anders Logg <logg at simula.no>
-	   2007-2008, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/swig/exceptions.i
-	dolfin/swig/numpy_typemaps.i
-Copyright: 2007-2009, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/DofMap.cpp
-	dolfin/fem/DofMap.h
-Copyright: 2007-2010, Anders Logg <logg at simula.no>
-	   2007-2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/KrylovSolver.cpp
-	dolfin/la/LUSolver.h
-Copyright: 2007-2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/fem/DofMapBuilder.cpp
-	dolfin/fem/DofMapBuilder.h
-Copyright: 2008, Anders Logg <logg at simula.no>
-	   2008, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/CholmodCholeskySolver.cpp
-	dolfin/la/CholmodCholeskySolver.h
-Copyright: 2008, Dag Lindbo <dag at csc.kth.se>
-	   2008, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/waveguide/cpp/main.cpp
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-	dolfin/mesh/UnitInterval.cpp
-Copyright: 2008, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
+License: LGPL-3+
+
+Files: demo/undocumented/parameters/cpp/main.cpp
+ demo/undocumented/parameters/python/demo_parameters.py
+Copyright: 2009, Johan Hake
+ 2009, Anders Logg
+License: LGPL-3+
+
+Files: bench/plot.py
+ test/unit/meshconvert/cpp/test.cpp
+Copyright: 2009-2010, Johannes Ring
+License: LGPL-3+
+
+Files: demo/la/eigenvalue/cpp/main.cpp
+ demo/undocumented/dg-advection-diffusion/cpp/AdvectionDiffusion.ufl
+Copyright: 2007-2010, Kristian B. Oelgaard
+ 2007-2010, Garth N. Wells
+License: LGPL-3+
 
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-	demo/undocumented/trilinos/python/demo2.py
-Copyright: 2008, Kent-Andre Mardal <kent-and at simula.no>
-License: LGPL-2.1
+ demo/undocumented/meshintersection/2D/python/demo_2D.py
+Copyright: 2008, Kristoffer Selim
+License: LGPL-3+
+
+Files: utils/matlab/plotslab.m
+Copyright: 2003, Johan Hoffman
+ 2003-2005, Anders Logg
+License: LGPL-3+
+
+Files: demo/undocumented/dg-poisson/cpp/main.cpp
+Copyright: 2006-2008, Anders Logg
+ 2006-2008, Kristian B. Oelgaard
+License: LGPL-3+
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+Files: demo/undocumented/assembly/cpp/main.cpp
+Copyright: 2008, Anders Logg
+ 2008, Magnus Vikstrøm
+License: LGPL-3+
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+Files: bench/fem/assembly/cpp/main.cpp
+Copyright: 2008-2010, Dag Lindbo
+ 2008-2010, Anders Logg
+ 2008-2010, Ilmar Wilbers
+License: LGPL-3+
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+Files: utils/matlab/xmlmesh.m
+Copyright: 2004, Erik Svensson
+License: LGPL-3+
+
+Files: demo/undocumented/courtemanche/cpp/main.cpp
+Copyright: 2006-2009, Glenn Terje Lines
+ 2006-2009, Ola Skavhaug
+ 2006-2009, Simula Research Laboratory
+License: LGPL-3+
+
+Files: site-packages/dolfin/common/donothing.py
+Copyright: 2009, Hans Petter Langtangen
+License: LGPL-3+
+
+Files: demo/pde/hyperelasticity/cpp/HyperElasticity.ufl
+Copyright: 2009-2010, Garth N. Wells
+ 2009-2010, Garth N. Wells
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+Copyright: 2009, Harish Narayanyan
+License: LGPL-3+
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+Copyright: 2008, Joachim B. Haga
+License: LGPL-3+
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+Files: demo/pde/hyperelasticity/python/demo_hyperelasticity.py
+Copyright: 2008-2010, Johan Hake
+ 2008-2010, Garth N. Wells
+License: LGPL-3+
+
+Files: demo/undocumented/dg-poisson/cpp/Poisson.ufl
+Copyright: 2006-2007, Kristian B. Oelgaard
+ 2006-2007, Anders Logg
+License: LGPL-3+
+
+Files: demo/undocumented/dg-advection-diffusion/cpp/main.cpp
+Copyright: 2007-2008, Kristian B. Oelgaard
+ 2007-2008, Anders Logg
+ 2007-2008, Garth N. Wells
+License: LGPL-3+
+
+Files: demo/pde/biharmonic/cpp/Biharmonic.ufl
+Copyright: 2009, Kristian B. Oelgaard
+ 2009, Garth N. Wells
+ 2009, Anders Logg
+License: LGPL-3+
+
+Files: demo/undocumented/auto-adaptive-poisson/python/demo_auto-adaptive-poisson.py
+Copyright: 2011, Marie E. Rognes
+ 2011, Anders Logg
+License: LGPL-3+
+
+Files: dolfin/common/mpiutils.h
+Copyright: 2008-2009, Niclas Jansson
+ 2008-2009, Anders Logg
+ 2008-2009, Ola Skavhaug
+License: LGPL-3+
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+Files: dolfin/mesh/UnitSphere.h
+Copyright: 2008, Nuno Lopes
+License: LGPL-3+
+
+Files: dolfin/fem/ufcexp.h
+Copyright: 2009, Shawn W. Walker
+License: LGPL-3+
 
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-Copyright: 2008-2010, Johannes Ring <johannr at simula.no>
+Copyright: 2008-2011, Johannes Ring <johannr at simula.no>
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-Copyright: 2008-2009, Martin Sandve Alnes <martinal at simula.no>
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-Copyright: 2010, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
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-Copyright: 20010 Garth N. Wells <gnw20 at cam.ac.uk>
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-Files: dolfin/ode/Partition.cpp
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-Copyright: 2007-2008, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
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-Copyright: 2007-2009, Anders logg <logg at simula.no>
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-Files: demo/pde/mixed-poisson/cpp/main.cpp
-Copyright: 2007-2010, Anders Logg <logg at simula.no>
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-Copyright: 2008, Joachim B. Haga <jobh at broadpark.no>
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-Copyright: 2008, Nuno David Lopes <ndl at ptmat.fc.ul.pt>
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-Files: dolfin/main/mpiutils.h
-Copyright: 2008-2009, Niclas Jansson <njansson at kth.se>
-	   2008-2009, Anders Logg <logg at simula.no>
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-Copyright: 2008-2010, Dag Lindbo <dag at csc.kth.se>
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-	   2008-2010, Ilmar Wilbers <ilmarw at simula.no>
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-Copyright: 2008-2010, Johan Hake <hake at simula.no>
-	   2008-2010, Garth N. Wells <gnw20 at cam.ac.uk>
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-Files: site-packages/dolfin/common/donothing.py
-Copyright: 2009, Hans Petter Langtangen <hpl at simula.no>
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-Files: dolfin/common/Set.h
-Copyright: 2009, Garth N. Wells <gnw20 at cam.ac.uk>
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-Copyright: 2009, Harish Narayanyan <harish at simula.no>
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-Copyright: 2009, Johan Jansson <johanjan at math.chalmers.se>
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-Copyright: 2009, Johannes Ring <johannr at simula.no>
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-Copyright: 2009, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-	   2009, Garth N. Wells <gnw20 at cam.ac.uk>
-	   2009, Anders Logg <logg at simula.no>
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-Files: site-packages/dolfin/common/globalparameters.py
-Copyright: 2009-2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
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-Files: dolfin/common/Array.h
-Copyright: 2009-2010, Garth N. Wells <gnw20 at cam.ac.uk>
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-Files: demo/pde/hyperelasticity/cpp/HyperElasticity.ufl
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-Files: test/unit/quadrature/python/test.py
-Copyright: 2010, Andre Massing <massing at simula.no>
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-Files: bench/plot.py
-Copyright: 2010, Johannes Ring <johannr at simula.no>
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-Copyright: 2010, Andre Massing <massing at simula.no>
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-Copyright: 2010, Andre Massing <massing at simula.no>
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-Files: bench/function/evaluation/cpp/main.cpp
-Copyright: 2010, Andre Massing <massing at simula.no>
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-Files: bench/common/progress/cpp/main.cpp
-Copyright: 22010 Anders Logg <logg at simula.no>
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-Files: demo/undocumented/courtemanche/cpp/main.cpp
-Copyright: 2006-2009, Glenn Terje Lines <glennli at simula.no>
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-Files: dolfin/mesh/cgal_includes.h
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-Copyright: 2010, Andre Massing <massing at simula.no>
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-Files: demo/undocumented/distancequeries/cpp/main.cpp
-Copyright: 2010, Andre Massing <massing at simula.no>
-License: LGPL-2.1
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-Files: test/unit/quadrature/cpp/test.cpp
-Copyright: 2010, Andre Massing <massing at simula.no>
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-Files: site-packages/dolfin_utils/pjobs/pjobs.py
-Copyright: 2009, Martin Sandve Alnes <martinal at simula.no>
-License: LGPL-3
 
 Files: cmake/modules/FindGMP.cmake
 Copyright: 2006, Laurent Montel, <montel at kde.org>
-License: BSD
+License: BSD-3
 
 Files: dolfin/io/base64.cpp
+ dolfin/io/base64.h
 Copyright: 2004-2008, René Nyffenegger <rene.nyffenegger at adp-gmbh.ch>
-License: PD
-
-License: GPL-2
- On Debian systems, the complete text of the GNU General Public License
- (GPL) version 2 can be found at "/usr/share/common-licenses/GPL-2".
+License:
+ This source code is provided 'as-is', without any express or implied
+ warranty. In no event will the author be held liable for any damages
+ arising from the use of this software.
+ .
+ Permission is granted to anyone to use this software for any purpose,
+ including commercial applications, and to alter it and redistribute it
+ freely, subject to the following restrictions:
+ .
+ 1. The origin of this source code must not be misrepresented; you must not
+    claim that you wrote the original source code. If you use this source code
+    in a product, an acknowledgment in the product documentation would be
+    appreciated but is not required.
+ .
+ 2. Altered source versions must be plainly marked as such, and must not be
+    misrepresented as being the original source code.
+ .
+ 3. This notice may not be removed or altered from any source distribution.
+
+License: LGPL-3+
+ This package is free software; you can redistribute it and/or modify
+ it under the terms of the GNU Lesser General Public License as
+ published by the Free Software Foundation; either version 3 of the
+ License, or (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+ Lesser General Public License for more details.
+ .
+ You should have received a copy of the GNU Lesser General Public
+ License along with this package.  If not, see
+ <http://www.gnu.org/licenses/>.
+ .
+ On Debian systems the full text of the GNU Lesser General Public
+ License, version 3 can be found in the file
+ '/usr/share/common-licenses/LGPL-3'.
 
 License: GPL-2+
- On Debian systems, the complete text of the GNU General Public License
- (GPL) version 2 can be found at "/usr/share/common-licenses/GPL-2".
-
-License: GPL-3+
- On Debian systems, the complete text of the GNU General Public License
- (GPL) version 3 can be found at "/usr/share/common-licenses/GPL-3".
-
-License: LGPL-2+
- On Debian systems, the complete text of the GNU Lesser General Public
- License (LGPL) version 2 can be found at
- "/usr/share/common-licenses/LGPL-2".
-
-License: LGPL-2.1
- On Debian systems, the complete text of the GNU Lesser General Public
- License (LGPL) version 2.1 can be found at
- "/usr/share/common-licenses/LGPL-2.1".
-
-License: LGPL-3
- On Debian systems, the complete text of the GNU Lesser General Public
- License (LGPL) version 3 can be found at
- "/usr/share/common-licenses/LGPL-3".
+ This package is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or (at
+ your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+ General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this package.  If not, see <http://www.gnu.org/licenses/>.
+ .
+ On Debian systems the full text of the GNU General Public License,
+ version 2 can be found in the file
+ '/usr/share/common-licenses/GPL-2'.

Modified: packages/fenics/dolfin/trunk/debian/copyright_hints
URL: http://svn.debian.org/wsvn/debian-science/packages/fenics/dolfin/trunk/debian/copyright_hints?rev=38512&op=diff
==============================================================================
--- packages/fenics/dolfin/trunk/debian/copyright_hints (original)
+++ packages/fenics/dolfin/trunk/debian/copyright_hints Wed May 18 15:26:45 2011
@@ -1,1970 +1,2046 @@
-Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat?action=recall&rev=XXX
-Upstream-Name: Untrusted draft - double-check copyrights yourself!
+Format: http://svn.debian.org/wsvn/dep/web/deps/dep5.mdwn?rev=174
+Upstream-Name: FIXME
+Upstream-Contact: FIXME
+Source: FIXME
+Disclaimer: Autogenerated by CDBS
+
+Files: bench/bench.py
+ bench/common/progress/cpp/main.cpp
+ bench/common/timing/cpp/main.cpp
+ bench/fem/assembly/cpp/forms.h
+ bench/fem/convergence/cpp/forms/Poisson2D_1.ufl
+ bench/fem/convergence/cpp/forms/Poisson2D_2.ufl
+ bench/fem/convergence/cpp/forms/Poisson2D_3.ufl
+ bench/fem/convergence/cpp/forms/Poisson2D_4.ufl
+ bench/fem/convergence/cpp/forms/Poisson2D_5.ufl
+ bench/fem/convergence/cpp/forms/Poisson3D_1.ufl
+ bench/fem/convergence/cpp/forms/Poisson3D_2.ufl
+ bench/fem/convergence/cpp/forms/Poisson3D_3.ufl
+ bench/fem/convergence/cpp/forms/Poisson3D_4.ufl
+ bench/fem/convergence/cpp/forms/Poisson3D_5.ufl
+ bench/fem/convergence/cpp/main.cpp
+ bench/fem/jit/python/bench
+ bench/fem/multicore/cpp/main.cpp
+ bench/fem/speedup/cpp/Poisson.ufl
+ bench/fem/speedup/cpp/analyse-bench
+ bench/fem/speedup/cpp/assemble-poisson.cpp
+ bench/fem/speedup/cpp/bench
+ bench/fem/speedup/cpp/solve-poisson.cpp
+ bench/la/vector/access/cpp/main.cpp
+ bench/mesh/iteration/cpp/main.cpp
+ bench/mesh/refinement/cpp/main.cpp
+ bench/mesh/topology/cpp/main.cpp
+ bench/mesh/unitcube/cpp/main.cpp
+ cmake/scripts/generate-form-files
+ demo/la/eigenvalue/cpp/StiffnessMatrix.ufl
+ demo/pde/navier-stokes/cpp/PressureUpdate.ufl
+ demo/pde/navier-stokes/cpp/TentativeVelocity.ufl
+ demo/pde/navier-stokes/cpp/VelocityUpdate.ufl
+ demo/pde/navier-stokes/cpp/main.cpp
+ demo/pde/navier-stokes/python/demo_navier-stokes.py
+ demo/pde/poisson/cpp/Poisson.ufl
+ demo/pde/poisson/cpp/main.cpp
+ demo/pde/poisson/python/demo_poisson.py
+ demo/undocumented/advection-diffusion/cpp/AdvectionDiffusion.ufl
+ demo/undocumented/advection-diffusion/cpp/main.cpp
+ demo/undocumented/aliev-panfilov/cpp/main.cpp
+ demo/undocumented/assembly/cpp/ReactionDiffusion.ufl
+ demo/undocumented/bcs/cpp/Poisson.ufl
+ demo/undocumented/bcs/cpp/main.cpp
+ demo/undocumented/bcs/python/demo_bcs.py
+ demo/undocumented/block-matrix/cpp/StiffnessMatrix.ufl
+ demo/undocumented/collection/cpp/main.cpp
+ demo/undocumented/complex/cpp/main.cpp
+ demo/undocumented/elementplot/python/demo_elementplot.py
+ demo/undocumented/equality/cpp/Poisson.ufl
+ demo/undocumented/equality/cpp/main.cpp
+ demo/undocumented/eval/cpp/Projection.ufl
+ demo/undocumented/eval/cpp/main.cpp
+ demo/undocumented/eval/python/demo_eval.py
+ demo/undocumented/extrapolation/cpp/main.cpp
+ demo/undocumented/extrapolation/python/demo_extrapolation.py
+ demo/undocumented/functional/cpp/EnergyNorm.ufl
+ demo/undocumented/functional/cpp/main.cpp
+ demo/undocumented/harmonic/cpp/main.cpp
+ demo/undocumented/interpolation/python/demo_interpolation.py
+ demo/undocumented/lift-drag/cpp/Drag.ufl
+ demo/undocumented/lift-drag/cpp/Lift.ufl
+ demo/undocumented/lift-drag/cpp/main.cpp
+ demo/undocumented/lorenz/cpp/main.cpp
+ demo/undocumented/method-weights/cpp/main.cpp
+ demo/undocumented/neumann-poisson/cpp/Poisson.ufl
+ demo/undocumented/optimization/python/demo_optimization.py
+ demo/undocumented/periodic/cpp/Poisson.ufl
+ demo/undocumented/periodic/cpp/main.cpp
+ demo/undocumented/plot/cpp/main.cpp
+ demo/undocumented/plot/python/demo_plot.py
+ demo/undocumented/projection-interpolation/python/demo_projection-interpolation.py
+ demo/undocumented/quadrature/cpp/main.cpp
+ demo/undocumented/reaction-diffusion/cpp/ReactionDiffusion.ufl
+ demo/undocumented/reaction-diffusion/cpp/main.cpp
+ demo/undocumented/reaction-diffusion/python/demo_reaction-diffusion.py
+ demo/undocumented/reaction/cpp/main.cpp
+ demo/undocumented/refinement/cpp/main.cpp
+ demo/undocumented/refinement/python/demo_refinement.py
+ demo/undocumented/simple/cpp/MassMatrix3D.ufl
+ demo/undocumented/simple/cpp/StiffnessMatrix3D.ufl
+ demo/undocumented/smoothing/python/demo_smoothing.py
+ demo/undocumented/stiff/cpp/TestProblem1.h
+ demo/undocumented/stiff/cpp/TestProblem2.h
+ demo/undocumented/stiff/cpp/TestProblem3.h
+ demo/undocumented/stiff/cpp/TestProblem4.h
+ demo/undocumented/stiff/cpp/TestProblem5.h
+ demo/undocumented/stiff/cpp/TestProblem6.h
+ demo/undocumented/stiff/cpp/TestProblem7.h
+ demo/undocumented/stiff/cpp/TestProblem9.h
+ demo/undocumented/stiff/cpp/main.cpp
+ demo/undocumented/stokes-iterative/cpp/Stokes.ufl
+ demo/undocumented/stokes-stabilized/cpp/Stokes.ufl
+ demo/undocumented/stokes-stabilized/cpp/main.cpp
+ demo/undocumented/stokes-taylor-hood/cpp/Stokes.ufl
+ demo/undocumented/stokes-taylor-hood/cpp/main.cpp
+ demo/undocumented/subdomains/cpp/main.cpp
+ demo/undocumented/submesh/cpp/main.cpp
+ demo/undocumented/submesh/python/demo_submesh.py
+ demo/undocumented/sym-dirichlet-bc/cpp/Poisson.ufl
+ demo/undocumented/sym-dirichlet-bc/cpp/main.cpp
+ demo/undocumented/tensor-weighted-poisson/python/demo_tensor-weighted-poisson.py
+ demo/undocumented/tensor-weighted-poisson/python/generate_data.py
+ demo/undocumented/time-series/cpp/main.cpp
+ demo/undocumented/time-series/python/demo_time-series.py
+ dolfin/adaptivity/Extrapolation.cpp
+ dolfin/adaptivity/Extrapolation.h
+ dolfin/adaptivity/TimeSeries.cpp
+ dolfin/adaptivity/TimeSeries.h
+ dolfin/ale/HarmonicSmoothing.cpp
+ dolfin/ale/HarmonicSmoothing.h
+ dolfin/ale/Poisson1D.ufl
+ dolfin/ale/Poisson2D.ufl
+ dolfin/ale/Poisson3D.ufl
+ dolfin/common/Hierarchical.h
+ dolfin/common/IndexSet.h
+ dolfin/common/Timer.h
+ dolfin/common/Variable.cpp
+ dolfin/common/Variable.h
+ dolfin/common/constants.h
+ dolfin/common/dolfin_doc.h
+ dolfin/common/init.cpp
+ dolfin/common/init.h
+ dolfin/common/real.h
+ dolfin/common/timing.cpp
+ dolfin/common/timing.h
+ dolfin/common/types.h
+ dolfin/common/unittest.h
+ dolfin/common/utils.cpp
+ dolfin/common/utils.h
+ dolfin/fem/Assembler.cpp
+ dolfin/fem/Assembler.h
+ dolfin/fem/AssemblerTools.cpp
+ dolfin/fem/AssemblerTools.h
+ dolfin/fem/BasisFunction.h
+ dolfin/fem/BoundaryCondition.cpp
+ dolfin/fem/BoundaryCondition.h
+ dolfin/fem/DomainAssigner.cpp
+ dolfin/fem/DomainAssigner.h
+ dolfin/fem/FiniteElement.cpp
+ dolfin/fem/Form.h
+ dolfin/fem/OpenMpAssembler.h
+ dolfin/fem/PeriodicBC.cpp
+ dolfin/fem/PeriodicBC.h
+ dolfin/fem/PointSource.cpp
+ dolfin/fem/PointSource.h
+ dolfin/fem/UFC.cpp
+ dolfin/fem/UFC.h
+ dolfin/fem/UFCCell.h
+ dolfin/fem/UFCMesh.h
+ dolfin/fem/assemble.cpp
+ dolfin/fem/assemble.h
+ dolfin/function/CoefficientAssigner.cpp
+ dolfin/function/CoefficientAssigner.h
+ dolfin/function/Constant.cpp
+ dolfin/function/Constant.h
+ dolfin/function/Expression.cpp
+ dolfin/function/Expression.h
+ dolfin/function/Function.cpp
+ dolfin/function/Function.h
+ dolfin/function/FunctionSpace.cpp
+ dolfin/function/FunctionSpace.h
+ dolfin/function/GenericFunction.cpp
+ dolfin/function/GenericFunction.h
+ dolfin/function/SpecialFunctions.cpp
+ dolfin/function/SpecialFunctions.h
+ dolfin/function/SubSpace.cpp
+ dolfin/function/SubSpace.h
+ dolfin/io/BinaryFile.cpp
+ dolfin/io/BinaryFile.h
+ dolfin/io/XMLObject.cpp
+ dolfin/io/XMLObject.h
+ dolfin/la/DefaultFactory.cpp
+ dolfin/la/DefaultFactory.h
+ dolfin/la/GenericLinearSolver.cpp
+ dolfin/la/GenericMatrix.cpp
+ dolfin/la/GenericTensor.h
+ dolfin/la/LinearSolver.cpp
+ dolfin/la/PETScBaseMatrix.h
+ dolfin/la/PETScLUSolver.cpp
+ dolfin/la/PETScLUSolver.h
+ dolfin/la/STLMatrix.cpp
+ dolfin/la/STLMatrix.h
+ dolfin/la/Scalar.h
+ dolfin/la/SingularSolver.cpp
+ dolfin/la/SingularSolver.h
+ dolfin/la/solve.cpp
+ dolfin/la/solve.h
+ dolfin/la/uBLASDummyPreconditioner.cpp
+ dolfin/la/uBLASDummyPreconditioner.h
+ dolfin/la/uBLASKrylovMatrix.cpp
+ dolfin/la/uBLASKrylovMatrix.h
+ dolfin/log/Event.cpp
+ dolfin/log/Event.h
+ dolfin/log/LogManager.cpp
+ dolfin/log/LogManager.h
+ dolfin/log/LogStream.cpp
+ dolfin/log/LogStream.h
+ dolfin/log/Logger.cpp
+ dolfin/log/Logger.h
+ dolfin/log/Progress.cpp
+ dolfin/log/Table.cpp
+ dolfin/log/Table.h
+ dolfin/log/log.cpp
+ dolfin/math/Lagrange.cpp
+ dolfin/math/Lagrange.h
+ dolfin/math/Legendre.cpp
+ dolfin/math/Legendre.h
+ dolfin/math/basic.cpp
+ dolfin/math/basic.h
+ dolfin/mesh/BoundaryComputation.cpp
+ dolfin/mesh/BoundaryComputation.h
+ dolfin/mesh/BoundaryMesh.cpp
+ dolfin/mesh/BoundaryMesh.h
+ dolfin/mesh/Box.cpp
+ dolfin/mesh/Box.h
+ dolfin/mesh/Cell.h
+ dolfin/mesh/CellType.cpp
+ dolfin/mesh/CellType.h
+ dolfin/mesh/DomainBoundary.h
+ dolfin/mesh/DynamicMeshEditor.cpp
+ dolfin/mesh/DynamicMeshEditor.h
+ dolfin/mesh/Edge.cpp
+ dolfin/mesh/Edge.h
+ dolfin/mesh/Face.cpp
+ dolfin/mesh/Face.h
+ dolfin/mesh/Facet.cpp
+ dolfin/mesh/Facet.h
+ dolfin/mesh/FacetCell.cpp
+ dolfin/mesh/FacetCell.h
+ dolfin/mesh/IntervalCell.cpp
+ dolfin/mesh/IntervalCell.h
+ dolfin/mesh/Mesh.cpp
+ dolfin/mesh/Mesh.h
+ dolfin/mesh/MeshConnectivity.cpp
+ dolfin/mesh/MeshConnectivity.h
+ dolfin/mesh/MeshData.cpp
+ dolfin/mesh/MeshData.h
+ dolfin/mesh/MeshEditor.cpp
+ dolfin/mesh/MeshEditor.h
+ dolfin/mesh/MeshEntity.cpp
+ dolfin/mesh/MeshEntity.h
+ dolfin/mesh/MeshEntityIterator.h
+ dolfin/mesh/MeshFunction.h
+ dolfin/mesh/MeshGeometry.cpp
+ dolfin/mesh/MeshGeometry.h
+ dolfin/mesh/MeshOrdering.cpp
+ dolfin/mesh/MeshOrdering.h
+ dolfin/mesh/MeshRenumbering.cpp
+ dolfin/mesh/MeshRenumbering.h
+ dolfin/mesh/MeshSmoothing.cpp
+ dolfin/mesh/MeshSmoothing.h
+ dolfin/mesh/MeshTopology.cpp
+ dolfin/mesh/MeshTopology.h
+ dolfin/mesh/Point.cpp
+ dolfin/mesh/Point.h
+ dolfin/mesh/Rectangle.cpp
+ dolfin/mesh/Rectangle.h
+ dolfin/mesh/SubDomain.cpp
+ dolfin/mesh/SubDomain.h
+ dolfin/mesh/SubMesh.cpp
+ dolfin/mesh/SubMesh.h
+ dolfin/mesh/SubsetIterator.h
+ dolfin/mesh/TetrahedronCell.cpp
+ dolfin/mesh/TetrahedronCell.h
+ dolfin/mesh/TopologyComputation.cpp
+ dolfin/mesh/TopologyComputation.h
+ dolfin/mesh/TriangleCell.cpp
+ dolfin/mesh/TriangleCell.h
+ dolfin/mesh/UnitCircle.cpp
+ dolfin/mesh/UnitCircle.h
+ dolfin/mesh/UnitCube.cpp
+ dolfin/mesh/UnitCube.h
+ dolfin/mesh/UnitSphere.cpp
+ dolfin/mesh/UnitSquare.cpp
+ dolfin/mesh/UnitSquare.h
+ dolfin/mesh/UnitTetrahedron.cpp
+ dolfin/mesh/UnitTetrahedron.h
+ dolfin/mesh/UnitTriangle.cpp
+ dolfin/mesh/UnitTriangle.h
+ dolfin/mesh/Vertex.h
+ dolfin/ode/Adaptivity.cpp
+ dolfin/ode/Adaptivity.h
+ dolfin/ode/Alloc.cpp
+ dolfin/ode/Alloc.h
+ dolfin/ode/ComplexODE.cpp
+ dolfin/ode/ComplexODE.h
+ dolfin/ode/Controller.cpp
+ dolfin/ode/Controller.h
+ dolfin/ode/Dependencies.cpp
+ dolfin/ode/Dependencies.h
+ dolfin/ode/Dual.cpp
+ dolfin/ode/Dual.h
+ dolfin/ode/Method.cpp
+ dolfin/ode/Method.h
+ dolfin/ode/MonoAdaptiveFixedPointSolver.cpp
+ dolfin/ode/MonoAdaptiveFixedPointSolver.h
+ dolfin/ode/MonoAdaptiveJacobian.cpp
+ dolfin/ode/MonoAdaptiveJacobian.h
+ dolfin/ode/MonoAdaptiveNewtonSolver.cpp
+ dolfin/ode/MonoAdaptiveNewtonSolver.h
+ dolfin/ode/MonoAdaptiveTimeSlab.cpp
+ dolfin/ode/MonoAdaptiveTimeSlab.h
+ dolfin/ode/MonoAdaptivity.cpp
+ dolfin/ode/MonoAdaptivity.h
+ dolfin/ode/MultiAdaptiveFixedPointSolver.cpp
+ dolfin/ode/MultiAdaptiveFixedPointSolver.h
+ dolfin/ode/MultiAdaptiveJacobian.cpp
+ dolfin/ode/MultiAdaptiveJacobian.h
+ dolfin/ode/MultiAdaptiveNewtonSolver.cpp
+ dolfin/ode/MultiAdaptiveNewtonSolver.h
+ dolfin/ode/MultiAdaptivePreconditioner.cpp
+ dolfin/ode/MultiAdaptivePreconditioner.h
+ dolfin/ode/MultiAdaptiveTimeSlab.cpp
+ dolfin/ode/MultiAdaptiveTimeSlab.h
+ dolfin/ode/MultiAdaptivity.cpp
+ dolfin/ode/MultiAdaptivity.h
+ dolfin/ode/Sample.cpp
+ dolfin/ode/Sample.h
+ dolfin/ode/TimeSlab.cpp
+ dolfin/ode/TimeSlab.h
+ dolfin/ode/TimeSlabJacobian.cpp
+ dolfin/ode/TimeSlabJacobian.h
+ dolfin/ode/TimeSlabSolver.cpp
+ dolfin/ode/TimeSlabSolver.h
+ dolfin/ode/UpdatedMultiAdaptiveJacobian.cpp
+ dolfin/ode/UpdatedMultiAdaptiveJacobian.h
+ dolfin/ode/cGqMethod.cpp
+ dolfin/ode/cGqMethod.h
+ dolfin/ode/dGqMethod.cpp
+ dolfin/ode/dGqMethod.h
+ dolfin/parameter/GlobalParameters.cpp
+ dolfin/parameter/GlobalParameters.h
+ dolfin/parameter/Parameter.cpp
+ dolfin/parameter/Parameter.h
+ dolfin/parameter/Parameters.cpp
+ dolfin/parameter/Parameters.h
+ dolfin/plot/FunctionPlotData.cpp
+ dolfin/plot/FunctionPlotData.h
+ dolfin/plot/plot.cpp
+ dolfin/plot/plot.h
+ dolfin/quadrature/GaussQuadrature.cpp
+ dolfin/quadrature/GaussQuadrature.h
+ dolfin/quadrature/GaussianQuadrature.cpp
+ dolfin/quadrature/GaussianQuadrature.h
+ dolfin/quadrature/LobattoQuadrature.cpp
+ dolfin/quadrature/LobattoQuadrature.h
+ dolfin/quadrature/Quadrature.cpp
+ dolfin/quadrature/Quadrature.h
+ dolfin/quadrature/RadauQuadrature.cpp
+ dolfin/quadrature/RadauQuadrature.h
+ dolfin/refinement/LocalMeshRefinement.cpp
+ dolfin/refinement/LocalMeshRefinement.h
+ dolfin/refinement/RegularCutRefinement.cpp
+ dolfin/refinement/RegularCutRefinement.h
+ dolfin/refinement/UniformMeshRefinement.cpp
+ dolfin/refinement/UniformMeshRefinement.h
+ dolfin/swig/fem_pre.i
+ dolfin/swig/function_pre.i
+ dolfin/swig/generate.py
+ dolfin/swig/mesh_post.i
+ dolfin/swig/mesh_pre.i
+ dolfin/swig/typemaps.i
+ scripts/dolfin-convert/dolfin-convert
+ scripts/dolfin-order/dolfin-order
+ scripts/dolfin-plot/dolfin-plot
+ site-packages/dolfin/common/globalparameters.py.in
+ site-packages/dolfin/common/memory.py
+ site-packages/dolfin/fem/assemble.py
+ site-packages/dolfin/fem/bcs.py
+ site-packages/dolfin/fem/errornorm.py
+ site-packages/dolfin/fem/interpolate.py
+ site-packages/dolfin/fem/norm.py
+ site-packages/dolfin/fem/project.py
+ site-packages/dolfin/fem/variationalproblem.py
+ site-packages/dolfin/functions/constant.py
+ site-packages/dolfin/functions/specialfunctions.py
+ site-packages/dolfin/mesh/ale.py
+ site-packages/dolfin/mesh/refine.py
+ site-packages/dolfin_utils/commands.py
+ site-packages/dolfin_utils/documentation/docstringutils.py
+ site-packages/dolfin_utils/documentation/extractdocumentation.py
+ test/system/parallel-assembly-solve/solver.py
+ test/system/parallel-assembly-solve/test.py
+ test/system/test.py
+ test/test.py
+ test/unit/function/cpp/Projection.ufl
+ test/unit/function/cpp/test.cpp
+ test/unit/function/python/test.py
+ test/unit/io/python/test.py
+ test/unit/jit/python/test.py
+ test/unit/mesh/cpp/test.cpp
+ test/unit/mesh/python/test.py
+ test/unit/parameter/cpp/test.cpp
+ test/unit/parameter/python/test.py
+ test/unit/python-extras/python/test.py
+ test/unit/test.py
+ utils/matlab/meshindex.m
+ utils/matlab/plotcontroller.m
+ utils/python/extract2d
+ utils/scripts/formatcode
+ utils/system/monitor
+ utils/tetgen/dolfin-tetgen
+ utils/xml/convertall
+Copyright: 2002-2006, Anders Logg
+ 2002-2008, Anders Logg
+ 2003-2005, Anders Logg
+ 2003-2006, Anders Logg
+ 2003-2007, Anders Logg
+ 2003-2008, Anders Logg
+ 2003-2009, Anders Logg
+ 2003-2010, Anders Logg
+ 2003-2011, Anders Logg
+ 2004-2005, Anders Logg
+ 2004-2006, Anders Logg
+ 2004-2007, Anders Logg
+ 2004-2008, Anders Logg
+ 2005, Anders Logg
+ 2005-2006, Anders Logg
+ 2005-2007, Anders Logg
+ 2005-2008, Anders Logg
+ 2005-2009, Anders Logg
+ 2005-2010, Anders Logg
+ 2005-2011, Anders Logg
+ 2006, Anders Logg
+ 2006-2007, Anders Logg
+ 2006-2008, Anders Logg
+ 2006-2009, Anders Logg
+ 2006-2010, Anders Logg
+ 2006-2011, Anders Logg
+ 2007, Anders Logg
+ 2007-2008, Anders Logg
+ 2007-2009, Anders Logg
+ 2007-2010, Anders Logg
+ 2007-2011, Anders Logg
+ 2008, Anders Logg
+ 2008-2009, Anders Logg
+ 2008-2010, Anders Logg
+ 2008-2011, Anders Logg
+ 2009, Anders Logg
+ 2009-2010, Anders Logg
+ 2009-2011, Anders Logg
+ 2010, Anders Logg
+ 2011, Anders Logg
+License: LGPL-3+
+ FIXME
 
 Files: AUTHORS
-	CMakeLists.txt
-	ChangeLog
-	TODO
-	bench/CMakeLists.txt
-	bench/README
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-	demo/undocumented/curl-curl/cpp/CMakeLists.txt
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-	demo/undocumented/time-series/cpp/CMakeLists.txt
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-	doc/manual/chapters/pde.tex
-	doc/manual/chapters/pydolfin.tex
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-	doc/manual/eps/quadrilateral.eps
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-	doc/manual/eps/tetrahedron.eps
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-	doc/manual/eps/ufcfig.eps
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-	doc/progr_reference/html/mydot.png
-	doc/progr_reference/html/myfooter.inc
-	doc/progr_reference/html/myheader.inc
-	doc/progr_reference/tex/README
-	dolfin/CMakeLists.txt
-	dolfin/adaptivity/dolfin_adaptivity.h
-	dolfin/ale/dolfin_ale.h
-	dolfin/common/dolfin_common.h
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-	dolfin/log/dolfin_log.h
-	dolfin/main/dolfin_main.h
-	dolfin/math/dolfin_math.h
-	dolfin/mesh/Changesets_description.txt
-	dolfin/mesh/dolfin_mesh.h
-	dolfin/nls/dolfin_nls.h
-	dolfin/ode/README
-	dolfin/ode/dolfin_ode.h
-	dolfin/parameter/dolfin_parameter.h
-	dolfin/plot/dolfin_plot.h
-	dolfin/quadrature/dolfin_quadrature.h
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-	utils/scripts/notinuse
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+ CMakeLists.txt
+ INSTALL
+ TODO
+ bench/CMakeLists.txt
+ bench/README
+ bench/common/progress/cpp/CMakeLists.txt
+ bench/common/timing/cpp/CMakeLists.txt
+ bench/fem/assembly/cpp/CMakeLists.txt
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+ bench/fem/assembly/cpp/forms/Elasticity3D.ufl
+ bench/fem/assembly/cpp/forms/NSEMomentum3D.h
+ bench/fem/assembly/cpp/forms/NSEMomentum3D.ufl
+ bench/fem/assembly/cpp/forms/Poisson2DP1.h
+ bench/fem/assembly/cpp/forms/Poisson2DP1.ufl
+ bench/fem/assembly/cpp/forms/Poisson2DP2.h
+ bench/fem/assembly/cpp/forms/Poisson2DP2.ufl
+ bench/fem/assembly/cpp/forms/Poisson2DP3.h
+ bench/fem/assembly/cpp/forms/Poisson2DP3.ufl
+ bench/fem/assembly/cpp/forms/StabStokes2D.h
+ bench/fem/assembly/cpp/forms/StabStokes2D.ufl
+ bench/fem/assembly/cpp/forms/THStokes2D.h
+ bench/fem/assembly/cpp/forms/THStokes2D.ufl
+ bench/fem/convergence/cpp/CMakeLists.txt
+ bench/fem/convergence/cpp/README
+ bench/fem/convergence/cpp/forms/Poisson2D_1.h
+ bench/fem/convergence/cpp/forms/Poisson2D_2.h
+ bench/fem/convergence/cpp/forms/Poisson2D_3.h
+ bench/fem/convergence/cpp/forms/Poisson2D_4.h
+ bench/fem/convergence/cpp/forms/Poisson2D_5.h
+ bench/fem/convergence/cpp/forms/Poisson3D_1.h
+ bench/fem/convergence/cpp/forms/Poisson3D_2.h
+ bench/fem/convergence/cpp/forms/Poisson3D_3.h
+ bench/fem/convergence/cpp/forms/Poisson3D_4.h
+ bench/fem/convergence/cpp/forms/Poisson3D_5.h
+ bench/fem/multicore/cpp/CMakeLists.txt
+ bench/fem/multicore/cpp/NavierStokes.h
+ bench/fem/multicore/cpp/NavierStokes.ufl
+ bench/fem/multicore/cpp/Poisson.h
+ bench/fem/multicore/cpp/Poisson.ufl
+ bench/fem/speedup/cpp/CMakeLists.txt
+ bench/fem/speedup/cpp/Poisson.h
+ bench/fem/speedup/cpp/README
+ bench/fem/speedup/cpp/clean.sh
+ bench/function/evaluation/cpp/CMakeLists.txt
+ bench/function/evaluation/cpp/P1.h
+ bench/la/vector/access/cpp/CMakeLists.txt
+ bench/la/vector/assignment/cpp/CMakeLists.txt
+ bench/logs/bench.log
+ bench/logs/milestones.log
+ bench/mesh/iteration/cpp/CMakeLists.txt
+ bench/mesh/refinement/cpp/CMakeLists.txt
+ bench/mesh/topology/cpp/CMakeLists.txt
+ bench/mesh/unitcube/cpp/CMakeLists.txt
+ cmake.local
+ cmake/modules/CheckOpenMP.cmake
+ cmake/modules/FindAMD.cmake
+ cmake/modules/FindArmadillo.cmake
+ cmake/modules/FindBLAS.cmake
+ cmake/modules/FindBLASHeader.cmake
+ cmake/modules/FindCGAL.cmake
+ cmake/modules/FindCHOLMOD.cmake
+ cmake/modules/FindCppUnit.cmake
+ cmake/modules/FindLAPACK.cmake
+ cmake/modules/FindMTL4.cmake
+ cmake/modules/FindNumPy.cmake
+ cmake/modules/FindPETSc.cmake
+ cmake/modules/FindParMETIS.cmake
+ cmake/modules/FindSLEPc.cmake
+ cmake/modules/FindScotchPT.cmake
+ cmake/modules/FindTrilinos.cmake
+ cmake/modules/FindUFC.cmake
+ cmake/modules/FindUMFPACK.cmake
+ cmake/modules/ResolveCompilerPaths.cmake
+ cmake/post-install/CMakeLists.txt
+ cmake/templates/cmake_uninstall.cmake.in
+ cmake/templates/dolfin-config.cmake.in
+ cmake/templates/dolfin-version.in
+ cmake/templates/dolfin.conf.in
+ cmake/templates/dolfin.pc.in
+ data/graphs/directed_graph.xml
+ data/graphs/undirected_graph.xml
+ data/meshes/README
+ data/meshes/dolfin-inside-1.xml.gz
+ data/meshes/dolfin-inside-2.xml.gz
+ data/meshes/lshape.xml.gz
+ data/meshes/meshbc.xml.gz
+ data/meshes/rotator.xml.gz
+ data/meshes/tetmesh-1.xml.gz
+ data/meshes/tetmesh_LES_10_2_7.xml.gz
+ data/meshes/tetrahedron.xml.gz
+ data/meshes/triangle.xml.gz
+ data/meshes/trimesh-1.xml.gz
+ data/meshes/trimesh-16.xml.gz
+ data/meshes/trimesh-2.xml.gz
+ data/meshes/trimesh-4.xml.gz
+ data/meshes/trimesh-8.xml.gz
+ data/meshes/unstruct-trimesh-1.xml.gz
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 Copyright: *No copyright*
 License: UNKNOWN
-
-Files: INSTALL
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-	demo/pde/biharmonic/cpp/Biharmonic.h
-	demo/pde/cahn-hilliard/cpp/CahnHilliard2D.cpp
-	demo/pde/cahn-hilliard/cpp/CahnHilliard2D.h
-	demo/pde/cahn-hilliard/cpp/CahnHilliard3D.cpp
-	demo/pde/cahn-hilliard/cpp/CahnHilliard3D.h
-	demo/pde/hyperelasticity/cpp/HyperElasticity.h
-	demo/pde/mixed-poisson/cpp/MixedPoisson.h
-	demo/pde/navier-stokes/cpp/PressureUpdate.h
-	demo/pde/navier-stokes/cpp/TentativeVelocity.h
-	demo/pde/navier-stokes/cpp/VelocityUpdate.h
-	demo/pde/poisson/cpp/Poisson.h
-	demo/undocumented/advection-diffusion/cpp/AdvectionDiffusion.h
-	demo/undocumented/advection-diffusion/cpp/Velocity.h
-	demo/undocumented/assembly/cpp/ReactionDiffusion.h
-	demo/undocumented/bcs/cpp/Poisson.h
-	demo/undocumented/block-matrix/cpp/StiffnessMatrix.h
-	demo/undocumented/conditional/cpp/Conditional.h
-	demo/undocumented/curl-curl/cpp/CurrentDensity.h
-	demo/undocumented/curl-curl/cpp/EddyCurrents.h
-	demo/undocumented/dg-advection-diffusion/cpp/AdvectionDiffusion.h
-	demo/undocumented/dg-advection-diffusion/cpp/Projection.h
-	demo/undocumented/dg-advection-diffusion/cpp/Velocity.h
-	demo/undocumented/dg-poisson/cpp/Poisson.h
-	demo/undocumented/elasticity/cpp/Elasticity.h
-	demo/undocumented/elastodynamics/cpp/DG0_eps_xx.h
-	demo/undocumented/elastodynamics/cpp/ElastoDynamics.h
-	demo/undocumented/equality/cpp/Poisson.h
-	demo/undocumented/eval/cpp/Projection.h
-	demo/undocumented/extrapolation/cpp/P1.h
-	demo/undocumented/extrapolation/cpp/P2.h
-	demo/undocumented/functional/cpp/EnergyNorm.h
-	demo/undocumented/lift-drag/cpp/Drag.h
-	demo/undocumented/lift-drag/cpp/Lift.h
-	demo/undocumented/lift-drag/cpp/Pressure.h
-	demo/undocumented/neumann-poisson/cpp/Poisson.h
-	demo/undocumented/nonlinear-poisson/cpp/NonlinearPoisson.h
-	demo/undocumented/nonmatching-interpolation/cpp/P1.h
-	demo/undocumented/nonmatching-interpolation/cpp/P3.h
-	demo/undocumented/nonmatching-projection/cpp/P1_projection.h
-	demo/undocumented/nonmatching-projection/cpp/P3.h
-	demo/undocumented/periodic/cpp/Poisson.h
-	demo/undocumented/poisson1D/cpp/Poisson.h
-	demo/undocumented/reaction-diffusion/cpp/ReactionDiffusion.h
-	demo/undocumented/simple/cpp/MassMatrix3D.h
-	demo/undocumented/simple/cpp/StiffnessMatrix3D.h
-	demo/undocumented/spatial-coordinates/cpp/SpatialCoordinates.h
-	demo/undocumented/stokes-stabilized/cpp/Stokes.h
-	demo/undocumented/stokes-taylor-hood/cpp/Stokes.h
-	demo/undocumented/sym-dirichlet-bc/cpp/Poisson.h
-	demo/undocumented/waveguide/cpp/Forms.h
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-	dolfin/ale/Poisson1D.h
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-Copyright: *No copyright*
-License: UNKNOWN (GENERATED FILE)
-
-Files: bench/fem/speedup/cpp/Poisson.ufl
-	bench/fem/speedup/cpp/analyse-bench
-	bench/fem/speedup/cpp/assemble-poisson.cpp
-	bench/fem/speedup/cpp/solve-poisson.cpp
-	demo/undocumented/collection/cpp/main.cpp
-	demo/undocumented/reaction-diffusion/cpp/main.cpp
-	demo/undocumented/reaction-diffusion/python/demo.py
-	demo/undocumented/submesh/cpp/main.cpp
-	demo/undocumented/submesh/python/demo.py
-	demo/undocumented/time-series/cpp/main.cpp
-	demo/undocumented/time-series/python/demo.py
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-	dolfin/common/utils.cpp
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-	dolfin/function/Data.cpp
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-	dolfin/function/GenericFunction.cpp
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-	dolfin/io/BinaryFile.cpp
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-	dolfin/mesh/SubMesh.cpp
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-	dolfin/parameter/GlobalParameters.cpp
-	dolfin/parameter/GlobalParameters.h
-	dolfin/parameter/Parameter.cpp
-	dolfin/parameter/Parameter.h
-	dolfin/parameter/Parameters.cpp
-	dolfin/parameter/Parameters.h
-	dolfin/plot/FunctionPlotData.cpp
-	dolfin/plot/FunctionPlotData.h
-	dolfin/swig/fem_pre.i
-	site-packages/dolfin/fem/bcs.py
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-	test/system/parallel-assembly-solve/solver.py
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-	test/system/test.py
-	test/unit/python-extras/python/test.py
-	utils/scripts/formatcode
-	utils/tetgen/dolfin-tetgen
-Copyright: 2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/assembly/cpp/ReactionDiffusion.ufl
-	demo/undocumented/bcs/cpp/Poisson.ufl
-	demo/undocumented/bcs/cpp/main.cpp
-	demo/undocumented/bcs/python/demo.py
-	demo/undocumented/eval/cpp/Projection.ufl
-	demo/undocumented/eval/cpp/main.cpp
-	demo/undocumented/eval/python/demo.py
-	demo/undocumented/optimization/python/demo.py
-	demo/undocumented/projection-interpolation/python/demo.py
-	dolfin/ale/HarmonicSmoothing.cpp
-	dolfin/ale/HarmonicSmoothing.h
-	dolfin/ale/Poisson1D.ufl
-	dolfin/ale/Poisson2D.ufl
-	dolfin/ale/Poisson3D.ufl
-	dolfin/common/Timer.h
-	dolfin/common/constants.h
-	dolfin/common/types.h
-	dolfin/fem/FiniteElement.cpp
-	dolfin/function/SubSpace.cpp
-	dolfin/function/SubSpace.h
-	dolfin/la/DefaultFactory.cpp
-	dolfin/la/DefaultFactory.h
-	dolfin/la/LinearSolver.cpp
-	dolfin/la/SingularSolver.h
-	dolfin/mesh/DomainBoundary.h
-	dolfin/mesh/DynamicMeshEditor.cpp
-	dolfin/mesh/DynamicMeshEditor.h
-	dolfin/mesh/MeshSmoothing.cpp
-	site-packages/dolfin/fem/errornorm.py
-	site-packages/dolfin/fem/norm.py
-	test/unit/function/cpp/Projection.form
-	test/unit/function/cpp/Projection.ufl
-	utils/order/dolfin-order
-	utils/python/extract2d
-Copyright: 2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/fem/convergence/cpp/forms/Poisson2D_1.ufl
-	bench/fem/convergence/cpp/forms/Poisson2D_2.ufl
-	bench/fem/convergence/cpp/forms/Poisson2D_3.ufl
-	bench/fem/convergence/cpp/forms/Poisson2D_4.ufl
-	bench/fem/convergence/cpp/forms/Poisson2D_5.ufl
-	bench/fem/convergence/cpp/forms/Poisson3D_1.ufl
-	bench/fem/convergence/cpp/forms/Poisson3D_2.ufl
-	bench/fem/convergence/cpp/forms/Poisson3D_3.ufl
-	bench/fem/convergence/cpp/forms/Poisson3D_4.ufl
-	bench/fem/convergence/cpp/forms/Poisson3D_5.ufl
-	demo/la/eigenvalue/cpp/StiffnessMatrix.ufl
-	demo/undocumented/block-matrix/cpp/StiffnessMatrix.ufl
-	demo/undocumented/complex/cpp/main.cpp
-	demo/undocumented/functional/cpp/EnergyNorm.ufl
-	demo/undocumented/simple/cpp/MassMatrix3D.ufl
-	demo/undocumented/simple/cpp/StiffnessMatrix3D.ufl
-	dolfin/la/PETScBaseMatrix.h
-	dolfin/la/PETScLUSolver.h
-	dolfin/main/init.cpp
-	dolfin/mesh/UnitCircle.h
-	dolfin/mesh/UnitCube.h
-	dolfin/ode/MonoAdaptiveFixedPointSolver.h
-	dolfin/ode/MonoAdaptiveJacobian.h
-	dolfin/ode/MonoAdaptiveNewtonSolver.h
-	dolfin/ode/MultiAdaptiveFixedPointSolver.h
-	dolfin/ode/MultiAdaptiveJacobian.h
-	dolfin/ode/MultiAdaptiveNewtonSolver.h
-	dolfin/ode/MultiAdaptivePreconditioner.cpp
-	dolfin/ode/MultiAdaptivePreconditioner.h
-	dolfin/ode/MultiAdaptivity.cpp
-	dolfin/ode/MultiAdaptivity.h
-	dolfin/ode/UpdatedMultiAdaptiveJacobian.h
-Copyright: 2005-2006, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/la/eigenvalue/python/demo.py
-	demo/pde/mixed-poisson/python/demo.py
-	demo/undocumented/advection-diffusion/python/demo.py
-	demo/undocumented/aliev-panfilov/python/demo.py
-	demo/undocumented/dg-poisson/python/demo.py
-	demo/undocumented/elasticity/python/demo.py
-	demo/undocumented/functional/python/demo.py
-	demo/undocumented/lift-drag/python/demo.py
-	demo/undocumented/meshfunction/python/demo.py
-	demo/undocumented/nonlinear-poisson/python/demo.py
-	demo/undocumented/periodic/python/demo.py
-	demo/undocumented/poisson1D/cpp/Poisson.ufl
-	demo/undocumented/poisson1D/cpp/main.cpp
-	demo/undocumented/poisson1D/python/demo.py
-	demo/undocumented/quadrature/python/demo.py
-	demo/undocumented/simple/python/demo.py
-	demo/undocumented/stokes-mini/python/demo.py
-	demo/undocumented/stokes-stabilized/python/demo.py
-	demo/undocumented/stokes-taylor-hood/python/demo.py
-	demo/undocumented/subdomains/python/demo.py
-	dolfin/mesh/Interval.cpp
-	dolfin/mesh/Interval.h
-	dolfin/mesh/UnitInterval.h
-Copyright: 2007, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
-
-Files: demo/undocumented/entityintersection/python/demo.py
-	demo/undocumented/meshintersection/3D/python/demo.py
-	dolfin/mesh/IntersectionOperator.cpp
-	dolfin/mesh/IntersectionOperator.h
-	dolfin/mesh/IntersectionOperatorImplementation.h
-	dolfin/mesh/MeshPrimitive.h
-	dolfin/mesh/Point_3_Bbox_3_intersection.h
-	dolfin/mesh/Point_3_Iso_Cuboid_3_intersection.h
-	dolfin/mesh/Point_3_Line_3_intersection.h
-	dolfin/mesh/Point_3_Point_3_intersection.h
-	dolfin/mesh/Point_3_Ray_3_intersection.h
-	dolfin/mesh/Point_3_Segment_3_intersection.h
-	dolfin/mesh/Point_3_Tetrahedron_3_intersection.h
-	dolfin/mesh/Point_3_Triangle_3_intersection.h
-	dolfin/mesh/PrimitiveTraits.h
-	dolfin/mesh/Segment_3_Segment_3_intersection.h
-	dolfin/mesh/Segment_3_Tetrahedron_3_intersection.h
-	dolfin/mesh/Tetrahedron_3_Bbox_3_intersection.h
-	dolfin/mesh/Tetrahedron_3_Tetrahedron_3_intersection.h
-	dolfin/mesh/Tree_Traits.h
-	dolfin/mesh/added_intersection_3.h
-	dolfin/swig/std_set_typemaps.i
+ FIXME
+
+Files: bench/function/evaluation/cpp/P1.ufl
+ bench/la/vector/assignment/cpp/main.cpp
+ cmake/scripts/generate-cmakefiles
+ demo/pde/cahn-hilliard/cpp/CahnHilliard2D.ufl
+ demo/pde/cahn-hilliard/cpp/CahnHilliard3D.ufl
+ demo/pde/cahn-hilliard/cpp/main.cpp
+ demo/pde/cahn-hilliard/python/demo_cahn-hilliard.py
+ demo/undocumented/advection-diffusion/cpp/Velocity.ufl
+ demo/undocumented/built-in/python/demo_built-in.py
+ demo/undocumented/coloring/cpp/main.cpp
+ demo/undocumented/coloring/python/demo_coloring.py
+ demo/undocumented/dg-advection-diffusion/cpp/Velocity.ufl
+ demo/undocumented/elastodynamics/python/demo_elastodynamics.py
+ demo/undocumented/lift-drag/cpp/Pressure.ufl
+ demo/undocumented/nonlinear-poisson/cpp/NonlinearPoisson.ufl
+ demo/undocumented/nonlinear-poisson/cpp/main.cpp
+ demo/undocumented/nonmatching-interpolation/cpp/P1.ufl
+ demo/undocumented/nonmatching-interpolation/cpp/P3.ufl
+ demo/undocumented/nonmatching-interpolation/cpp/main.cpp
+ demo/undocumented/nonmatching-interpolation/python/demo_nonmatching-interpolation.py
+ demo/undocumented/nonmatching-projection/cpp/P1_projection.ufl
+ demo/undocumented/nonmatching-projection/cpp/P3.ufl
+ demo/undocumented/nonmatching-projection/cpp/main.cpp
+ demo/undocumented/nonmatching-projection/python/demo_nonmatching-projection.py
+ demo/undocumented/stokes-iterative/cpp/StokesPreconditioner.ufl
+ demo/undocumented/stokes-iterative/cpp/main.cpp
+ demo/undocumented/stokes-iterative/python/demo_stokes-iterative.py
+ dolfin/adaptivity/adapt.cpp
+ dolfin/adaptivity/adapt.h
+ dolfin/common/Array.h
+ dolfin/common/NoDeleter.h
+ dolfin/common/Set.h
+ dolfin/common/SubSystemsManager.cpp
+ dolfin/common/SubSystemsManager.h
+ dolfin/common/UniqueIdGenerator.cpp
+ dolfin/common/UniqueIdGenerator.h
+ dolfin/fem/Form.cpp
+ dolfin/fem/OpenMpAssembler.cpp
+ dolfin/fem/SparsityPatternBuilder.cpp
+ dolfin/fem/SparsityPatternBuilder.h
+ dolfin/graph/BoostGraphInterface.cpp
+ dolfin/graph/BoostGraphInterface.h
+ dolfin/graph/Graph.h
+ dolfin/graph/GraphBuilder.cpp
+ dolfin/graph/GraphBuilder.h
+ dolfin/graph/GraphColoring.cpp
+ dolfin/graph/GraphColoring.h
+ dolfin/graph/MatrixRenumbering.cpp
+ dolfin/graph/MatrixRenumbering.h
+ dolfin/graph/SCOTCH.cpp
+ dolfin/graph/SCOTCH.h
+ dolfin/graph/ZoltanInterface.cpp
+ dolfin/graph/ZoltanInterface.h
+ dolfin/io/Encoder.h
+ dolfin/io/RAWFile.cpp
+ dolfin/io/RAWFile.h
+ dolfin/io/VTKFile.cpp
+ dolfin/io/VTKFile.h
+ dolfin/io/VTKWriter.cpp
+ dolfin/io/VTKWriter.h
+ dolfin/io/XYZFile.cpp
+ dolfin/io/XYZFile.h
+ dolfin/la/GenericLUSolver.h
+ dolfin/la/GenericLinearSolver.h
+ dolfin/la/GenericMatrix.h
+ dolfin/la/GenericVector.h
+ dolfin/la/ITLKrylovSolver.cpp
+ dolfin/la/ITLKrylovSolver.h
+ dolfin/la/KrylovSolver.cpp
+ dolfin/la/KrylovSolver.h
+ dolfin/la/LUSolver.cpp
+ dolfin/la/LUSolver.h
+ dolfin/la/PETScObject.h
+ dolfin/la/PETScPreconditioner.cpp
+ dolfin/la/PETScPreconditioner.h
+ dolfin/la/SLEPcEigenSolver.cpp
+ dolfin/la/SLEPcEigenSolver.h
+ dolfin/la/SparsityPattern.cpp
+ dolfin/la/SparsityPattern.h
+ dolfin/la/TrilinosPreconditioner.cpp
+ dolfin/la/TrilinosPreconditioner.h
+ dolfin/la/UmfpackLUSolver.cpp
+ dolfin/la/UmfpackLUSolver.h
+ dolfin/la/Vector.h
+ dolfin/la/uBLASDenseMatrix.h
+ dolfin/la/uBLASILUPreconditioner.cpp
+ dolfin/la/uBLASILUPreconditioner.h
+ dolfin/la/uBLASKrylovSolver.cpp
+ dolfin/la/uBLASKrylovSolver.h
+ dolfin/la/uBLASMatrix.h
+ dolfin/la/uBLASPreconditioner.h
+ dolfin/la/uBLASSparseMatrix.h
+ dolfin/la/uBLASVector.cpp
+ dolfin/la/uBLASVector.h
+ dolfin/la/ublas.h
+ dolfin/mesh/MeshColoring.cpp
+ dolfin/mesh/MeshColoring.h
+ dolfin/nls/NewtonSolver.cpp
+ dolfin/nls/NewtonSolver.h
+ dolfin/nls/NonlinearProblem.h
+ dolfin/refinement/refine.cpp
+ dolfin/refinement/refine.h
+ site-packages/dolfin/common/time.py
+ test/unit/fem/cpp/test.cpp
+ test/unit/fem/python/Assembly.py
+ test/unit/fem/python/DirichletBC.py
+ test/unit/fem/python/test.py
+ test/unit/function/python/function.py
+ test/unit/la/python/Matrix.py
+ test/unit/la/python/Vector.py
+ test/unit/mesh/python/Edge.py
+ test/unit/mesh/python/Face.py
+ test/unit/mesh/python/MeshFunction.py
+Copyright: 2005, Garth N. Wells
+ 2005-2007, Garth N. Wells
+ 2005-2008, Garth N. Wells
+ 2005-2009, Garth N. Wells
+ 2005-2011, Garth N. Wells
+ 2006, Garth N. Wells
+ 2006-2007, Garth N. Wells
+ 2006-2008, Garth N. Wells
+ 2006-2009, Garth N. Wells
+ 2006-2010, Garth N. Wells
+ 2006-2011, Garth N. Wells
+ 2007, Garth N. Wells
+ 2007-2008, Garth N. Wells
+ 2007-2009, Garth N. Wells
+ 2007-2010, Garth N. Wells
+ 2007-2011, Garth N. Wells
+ 2008, Garth N. Wells
+ 2008-2009, Garth N. Wells
+ 2008-2010, Garth N. Wells
+ 2008-2011, Garth N. Wells
+ 2009, Garth N. Wells
+ 2009-2010, Garth N. Wells
+ 2009-2011, Garth N. Wells
+ 2010, Garth N. Wells
+ 2010-2011, Garth N. Wells
+ 2011, Garth N. Wells
+License: LGPL-3+
+ FIXME
+
+Files: demo/la/eigenvalue/python/demo_eigenvalue.py
+ demo/pde/biharmonic/cpp/main.cpp
+ demo/pde/biharmonic/python/demo_biharmonic.py
+ demo/pde/mixed-poisson/python/demo_mixed-poisson.py
+ demo/undocumented/advection-diffusion/python/demo_advection-diffusion.py
+ demo/undocumented/aliev-panfilov/python/demo.py
+ demo/undocumented/built-in/cpp/main.cpp
+ demo/undocumented/conditional/cpp/Conditional.ufl
+ demo/undocumented/conditional/cpp/main.cpp
+ demo/undocumented/conditional/python/demo_conditional.py
+ demo/undocumented/dg-advection-diffusion/cpp/Projection.ufl
+ demo/undocumented/dg-poisson/python/demo_dg-poisson.py
+ demo/undocumented/elasticity/python/demo_elasticity.py
+ demo/undocumented/functional/python/demo_functional.py
+ demo/undocumented/lift-drag/python/demo_lift-drag.py
+ demo/undocumented/meshfunction/python/demo_meshfunction.py
+ demo/undocumented/nonlinear-poisson/python/demo_nonlinear-poisson.py
+ demo/undocumented/periodic/python/demo_periodic.py
+ demo/undocumented/poisson1D/cpp/Poisson.ufl
+ demo/undocumented/poisson1D/cpp/main.cpp
+ demo/undocumented/poisson1D/python/demo_poisson1D.py
+ demo/undocumented/quadrature/python/demo_quadrature.py
+ demo/undocumented/simple/python/demo_simple.py
+ demo/undocumented/spatial-coordinates/cpp/SpatialCoordinates.ufl
+ demo/undocumented/spatial-coordinates/cpp/main.cpp
+ demo/undocumented/spatial-coordinates/python/demo_spatial-coordinates.py
+ demo/undocumented/stokes-mini/python/demo_stokes-mini.py
+ demo/undocumented/stokes-stabilized/python/demo_stokes-stabilized.py
+ demo/undocumented/stokes-taylor-hood/python/demo_stokes-taylor-hood.py
+ demo/undocumented/subdomains/python/demo_subdomains.py
+ dolfin/mesh/Interval.cpp
+ dolfin/mesh/Interval.h
+ dolfin/mesh/PointCell.cpp
+ dolfin/mesh/PointCell.h
+ dolfin/mesh/UnitInterval.cpp
+ dolfin/mesh/UnitInterval.h
+ dolfin/swig/codeexamples.py
+ dolfin/swig/documentation.py
+Copyright: 2007, Kristian B. Oelgaard
+ 2007-2007, Kristian B. Oelgaard
+ 2007-2008, Kristian B. Oelgaard
+ 2008, Kristian B. Oelgaard
+ 2009, Kristian B. Oelgaard
+ 2010, Kristian B. Oelgaard
+License: LGPL-3+
+ FIXME
+
+Files: bench/function/evaluation/cpp/main.cpp
+ demo/undocumented/distancequeries/cpp/main.cpp
+ demo/undocumented/entityintersection/cpp/main.cpp
+ demo/undocumented/entityintersection/python/demo_entityintersection.py
+ demo/undocumented/meshintersection/3D/python/demo_3D.py
+ dolfin/mesh/IntersectionOperator.cpp
+ dolfin/mesh/IntersectionOperator.h
+ dolfin/mesh/IntersectionOperatorImplementation.h
+ dolfin/mesh/MeshPrimitive.h
+ dolfin/mesh/Point_3_Bbox_3_intersection.h
+ dolfin/mesh/Point_3_Iso_Cuboid_3_intersection.h
+ dolfin/mesh/Point_3_Line_3_intersection.h
+ dolfin/mesh/Point_3_Point_3_intersection.h
+ dolfin/mesh/Point_3_Ray_3_intersection.h
+ dolfin/mesh/Point_3_Segment_3_intersection.h
+ dolfin/mesh/Point_3_Tetrahedron_3_intersection.h
+ dolfin/mesh/Point_3_Triangle_3_intersection.h
+ dolfin/mesh/PrimitiveIntersector.cpp
+ dolfin/mesh/PrimitiveIntersector.h
+ dolfin/mesh/PrimitiveTraits.h
+ dolfin/mesh/Segment_3_Segment_3_intersection.h
+ dolfin/mesh/Segment_3_Tetrahedron_3_intersection.h
+ dolfin/mesh/Tetrahedron_3_Bbox_3_intersection.h
+ dolfin/mesh/Tetrahedron_3_Tetrahedron_3_intersection.h
+ dolfin/mesh/Tree_Traits.h
+ dolfin/mesh/Triangle_3_Tetrahedron_3_do_intersect_SCK.cpp
+ dolfin/mesh/Triangle_3_Tetrahedron_3_do_intersect_SCK.h
+ dolfin/mesh/added_intersection_3.h
+ dolfin/mesh/cgal_includes.h
+ dolfin/quadrature/BarycenterQuadrature.cpp
+ dolfin/quadrature/BarycenterQuadrature.h
+ dolfin/swig/std_set_typemaps.i
+ test/unit/quadrature/cpp/test.cpp
+ test/unit/quadrature/python/test.py
 Copyright: 2009, Andre Massing
-License: LGPL-2.1
-
-Files: dolfin/io/XMLArray.cpp
-	dolfin/io/XMLArray.h
-	dolfin/io/XMLDolfin.cpp
-	dolfin/io/XMLDolfin.h
-	dolfin/io/XMLFile.cpp
-	dolfin/io/XMLFile.h
-	dolfin/io/XMLFunctionPlotData.cpp
-	dolfin/io/XMLHandler.cpp
-	dolfin/io/XMLHandler.h
-	dolfin/io/XMLIndent.cpp
-	dolfin/io/XMLIndent.h
-	dolfin/io/XMLMap.cpp
-	dolfin/io/XMLMap.h
-	dolfin/io/XMLMeshData.cpp
-	dolfin/io/XMLMeshData.h
-	dolfin/io/XMLMeshFunction.cpp
-	dolfin/io/XMLMeshFunction.h
-	dolfin/io/XMLSkipper.cpp
-	dolfin/io/XMLSkipper.h
-	dolfin/io/XMLVectorMapping.cpp
-	dolfin/io/XMLVectorMapping.h
-	dolfin/mesh/MeshFunction.cpp
-Copyright: 2009, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/lift-drag/cpp/main.cpp
-	demo/undocumented/periodic/cpp/main.cpp
-	demo/undocumented/plot/python/demo.py
-	demo/undocumented/subdomains/cpp/main.cpp
-	dolfin/fem/BoundaryCondition.cpp
-	dolfin/fem/BoundaryCondition.h
-	dolfin/fem/PeriodicBC.cpp
-	dolfin/fem/PeriodicBC.h
-	dolfin/fem/UFC.cpp
-	dolfin/fem/UFC.h
-	dolfin/la/GenericTensor.h
-	dolfin/la/STLMatrix.cpp
-	dolfin/la/STLMatrix.h
-	dolfin/la/Scalar.h
-	dolfin/la/solve.cpp
-	dolfin/la/solve.h
-	dolfin/mesh/MeshOrdering.h
-	dolfin/mesh/SubDomain.cpp
-	dolfin/mesh/SubDomain.h
-	site-packages/dolfin/fem/assemble.py
-	site-packages/dolfin/fem/variationalproblem.py
-Copyright: 2007-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/mesh/Box.cpp
-	dolfin/mesh/UnitCircle.cpp
-	dolfin/mesh/UnitCube.cpp
-	dolfin/mesh/UnitSphere.cpp
-	dolfin/ode/Adaptivity.cpp
-	dolfin/ode/ComplexODE.cpp
-	dolfin/ode/ComplexODE.h
-	dolfin/ode/Method.h
-	dolfin/ode/MonoAdaptiveFixedPointSolver.cpp
-	dolfin/ode/MonoAdaptiveTimeSlab.cpp
-	dolfin/ode/MonoAdaptiveTimeSlab.h
-	dolfin/ode/MonoAdaptivity.cpp
-	dolfin/ode/MultiAdaptiveFixedPointSolver.cpp
-	dolfin/ode/MultiAdaptiveJacobian.cpp
-	dolfin/ode/MultiAdaptiveTimeSlab.cpp
-	dolfin/ode/MultiAdaptiveTimeSlab.h
-	dolfin/ode/TimeSlab.cpp
-	dolfin/ode/TimeSlabJacobian.cpp
-	dolfin/ode/TimeSlabJacobian.h
-	dolfin/ode/UpdatedMultiAdaptiveJacobian.cpp
-Copyright: 2005-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/pde/poisson/cpp/main.cpp
-	demo/undocumented/equality/cpp/main.cpp
-	demo/undocumented/refinement/cpp/main.cpp
-	dolfin/function/Constant.cpp
-	dolfin/function/Constant.h
-	dolfin/function/SpecialFunctions.cpp
-	dolfin/function/SpecialFunctions.h
-	dolfin/mesh/CellType.cpp
-	dolfin/mesh/CellType.h
-	dolfin/mesh/Mesh.cpp
-	dolfin/mesh/Mesh.h
-	dolfin/mesh/MeshEditor.cpp
-	dolfin/mesh/MeshEditor.h
-	dolfin/mesh/MeshEntity.cpp
-	dolfin/mesh/MeshEntity.h
-	dolfin/mesh/MeshFunction.h
-	dolfin/mesh/MeshTopology.cpp
-	dolfin/mesh/MeshTopology.h
-	dolfin/swig/mesh_post.i
-	dolfin/swig/mesh_pre.i
-Copyright: 2006-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/advection-diffusion/cpp/main.cpp
-	demo/undocumented/aliev-panfilov/cpp/main.cpp
-	demo/undocumented/functional/cpp/main.cpp
-	demo/undocumented/stokes-stabilized/cpp/main.cpp
-	demo/undocumented/stokes-taylor-hood/cpp/main.cpp
-	dolfin/mesh/BoundaryComputation.cpp
-	dolfin/mesh/BoundaryComputation.h
-	dolfin/mesh/BoundaryMesh.cpp
-	dolfin/mesh/BoundaryMesh.h
-	dolfin/mesh/IntervalCell.cpp
-	dolfin/mesh/IntervalCell.h
-	dolfin/mesh/MeshEntityIterator.h
-	dolfin/mesh/Point.cpp
-	dolfin/mesh/Point.h
-	dolfin/mesh/TetrahedronCell.cpp
-	dolfin/mesh/TetrahedronCell.h
-	dolfin/mesh/TopologyComputation.cpp
-	dolfin/mesh/TriangleCell.h
-Copyright: 2006-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/function/evaluation/cpp/P1.ufl
-	demo/pde/cahn-hilliard/python/demo.py
-	demo/undocumented/advection-diffusion/cpp/Velocity.ufl
-	demo/undocumented/dg-advection-diffusion/cpp/Velocity.ufl
-	demo/undocumented/lift-drag/cpp/Pressure.ufl
-	demo/undocumented/nonmatching-interpolation/cpp/P1.ufl
-	demo/undocumented/nonmatching-interpolation/cpp/P3.ufl
-	demo/undocumented/nonmatching-interpolation/cpp/main.cpp
-	demo/undocumented/nonmatching-interpolation/python/demo.py
-	demo/undocumented/nonmatching-projection/cpp/P1_projection.ufl
-	demo/undocumented/nonmatching-projection/cpp/P3.ufl
-	demo/undocumented/nonmatching-projection/cpp/main.cpp
-	demo/undocumented/nonmatching-projection/python/demo.py
-	dolfin/io/Encoder.h
-	test/unit/fem/cpp/test.cpp
-	test/unit/fem/python/test.py
-Copyright: 2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: cmake/scripts/generate-cmakefiles
-	demo/undocumented/elastodynamics/python/demo.py
-	demo/undocumented/stokes-iterative/python/demo.py
-	dolfin/graph/GraphBuilder.cpp
-	dolfin/graph/GraphBuilder.h
-	dolfin/graph/SCOTCH.cpp
-	dolfin/graph/SCOTCH.h
-	dolfin/io/VTKWriter.cpp
-	dolfin/io/VTKWriter.h
-	dolfin/la/GenericLUSolver.h
-	dolfin/la/PETScPreconditioner.cpp
-	dolfin/la/PETScPreconditioner.h
-	dolfin/la/TrilinosPreconditioner.cpp
-	dolfin/la/TrilinosPreconditioner.h
-	dolfin/mesh/refine.cpp
-	dolfin/mesh/refine.h
-Copyright: 2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: cmake/scripts/generate-form-files
-	demo/pde/poisson/cpp/Poisson.ufl
-	demo/undocumented/neumann-poisson/cpp/Poisson.ufl
-	demo/undocumented/reaction/cpp/main.cpp
-	dolfin/la/PETScLUSolver.cpp
-	dolfin/mesh/Box.h
-	dolfin/mesh/Rectangle.cpp
-	dolfin/mesh/Rectangle.h
-	dolfin/mesh/UnitSquare.cpp
-	dolfin/mesh/UnitSquare.h
-	dolfin/ode/MonoAdaptiveJacobian.cpp
-	dolfin/ode/MonoAdaptiveNewtonSolver.cpp
-	dolfin/ode/MultiAdaptiveNewtonSolver.cpp
-	dolfin/ode/TimeSlab.h
-	dolfin/ode/TimeSlabSolver.cpp
-Copyright: 2005-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/pde/poisson/python/demo.py
-	demo/undocumented/refinement/python/demo.py
-	demo/undocumented/tensor-weighted-poisson/python/generate_data.py
-	dolfin/fem/Assembler.cpp
-	dolfin/fem/Assembler.h
-	dolfin/fem/AssemblerTools.cpp
-	dolfin/fem/AssemblerTools.h
-	dolfin/fem/UFCCell.h
-	dolfin/fem/assemble.cpp
-	dolfin/fem/assemble.h
-	dolfin/mesh/MeshOrdering.cpp
-	dolfin/plot/plot.cpp
-	dolfin/plot/plot.h
-	dolfin/swig/function_pre.i
-	test/test.py
-Copyright: 2007-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
+ 2010, Andre Massing
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/meshfunction/cpp/main.cpp
+ dolfin/io/XMLArray.cpp
+ dolfin/io/XMLArray.h
+ dolfin/io/XMLDolfin.cpp
+ dolfin/io/XMLDolfin.h
+ dolfin/io/XMLFile.cpp
+ dolfin/io/XMLFile.h
+ dolfin/io/XMLFunctionPlotData.cpp
+ dolfin/io/XMLHandler.cpp
+ dolfin/io/XMLHandler.h
+ dolfin/io/XMLIndent.cpp
+ dolfin/io/XMLIndent.h
+ dolfin/io/XMLLocalMeshData.cpp
+ dolfin/io/XMLLocalMeshData.h
+ dolfin/io/XMLMap.cpp
+ dolfin/io/XMLMap.h
+ dolfin/io/XMLMeshData.cpp
+ dolfin/io/XMLMeshData.h
+ dolfin/io/XMLMeshFunction.cpp
+ dolfin/io/XMLMeshFunction.h
+ dolfin/io/XMLSkipper.cpp
+ dolfin/io/XMLSkipper.h
+ dolfin/io/XMLVectorMapping.cpp
+ dolfin/io/XMLVectorMapping.h
+ dolfin/la/GenericSparsityPattern.h
+ dolfin/la/LinearAlgebraFactory.h
+ dolfin/la/PETScFactory.cpp
+ dolfin/la/PETScFactory.h
+ dolfin/la/uBLASFactory.h
+ dolfin/mesh/LocalMeshData.cpp
+ dolfin/mesh/LocalMeshData.h
+ dolfin/mesh/MeshFunction.cpp
+ dolfin/swig/exceptions.i
+ dolfin/swig/numpy_typemaps.i
+Copyright: 2005-2006, Ola Skavhaug
+ 2006, Ola Skavhaug
+ 2007, Ola Skavhaug
+ 2007-2009, Ola Skavhaug
+ 2008, Ola Skavhaug
+ 2009, Ola Skavhaug
+License: LGPL-3+
+ FIXME
+
+Files: bench/function/extrapolation/python/bench
+ demo/undocumented/auto-adaptive-navier-stokes/cpp/AdaptiveNavierStokes.ufl
+ demo/undocumented/auto-adaptive-navier-stokes/cpp/main.cpp
+ demo/undocumented/auto-adaptive-navier-stokes/python/demo_auto-adaptive-navier-stokes.py
+ demo/undocumented/extrapolation/python/demo2.py
+ demo/undocumented/meshfunction-refinement/cpp/main.cpp
+ demo/undocumented/neumann-poisson/cpp/main.cpp
+ demo/undocumented/neumann-poisson/python/demo_neumann-poisson.py
+ dolfin/adaptivity/AdaptiveDatum.cpp
+ dolfin/adaptivity/AdaptiveDatum.h
+ dolfin/adaptivity/AdaptiveVariationalSolver.cpp
+ dolfin/adaptivity/AdaptiveVariationalSolver.h
+ dolfin/adaptivity/ErrorControl.cpp
+ dolfin/adaptivity/ErrorControl.h
+ dolfin/adaptivity/GoalFunctional.cpp
+ dolfin/adaptivity/GoalFunctional.h
+ dolfin/adaptivity/LocalAssembler.cpp
+ dolfin/adaptivity/LocalAssembler.h
+ dolfin/adaptivity/SpecialFacetFunction.cpp
+ dolfin/adaptivity/SpecialFacetFunction.h
+ dolfin/adaptivity/marking.cpp
+ dolfin/adaptivity/marking.h
+ dolfin/swig/adaptivity_pre.i
+ site-packages/dolfin_utils/wrappers/form.py
+ site-packages/dolfin_utils/wrappers/functionspace.py
+ site-packages/dolfin_utils/wrappers/goalfunctional.py
+ site-packages/dolfin_utils/wrappers/wrappers.py
+ test/unit/adaptivity/python/errorcontrol.py
+Copyright: 2010, Marie E. Rognes
+ 2011, Marie E. Rognes
+License: LGPL-3+
+ FIXME
+
+Files: bench/fem/speedup/cpp/submit-bench
+ demo/undocumented/dg-advection-diffusion/python/demo_dg-advection-diffusion.py
+ dolfin/swig/Indices.i
+ dolfin/swig/array_typemaps.i
+ dolfin/swig/common_pre.i
+ dolfin/swig/defines.i
+ dolfin/swig/fem_post.i
+ dolfin/swig/function_post.i
+ dolfin/swig/la_get_set_items.i
+ dolfin/swig/log_post.i
+ dolfin/swig/log_pre.i
+ dolfin/swig/nls_pre.i
+ dolfin/swig/ode_pre.i
+ dolfin/swig/parameter_post.i
+ dolfin/swig/parameter_pre.i
+ dolfin/swig/shared_ptr_classes.i
+ dolfin/swig/std_pair_typemaps.i
+ dolfin/swig/std_vector_typemaps.i
+ dolfin/swig/version.i
+ site-packages/dolfin/compilemodules/compilemodule.py
+ site-packages/dolfin/compilemodules/jit.py
+ site-packages/dolfin/fem/form.py
+ site-packages/dolfin/functions/expression.py
+ site-packages/dolfin/functions/function.py
+ site-packages/dolfin/functions/functionspace.py
+ test/unit/la/cpp/test.cpp
+ test/unit/la/python/test.py
+Copyright: 2005-2006, Johan Hake
+ 2006-2009, Johan Hake
+ 2007, Johan Hake
+ 2007-2009, Johan Hake
+ 2008, Johan Hake
+ 2008-2009, Johan Hake
+ 2009, Johan Hake
+ 2011, Johan Hake
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/fem/DirichletBC.cpp
+ dolfin/fem/DirichletBC.h
+ dolfin/fem/DofMap.cpp
+ dolfin/fem/DofMap.h
+ dolfin/fem/FiniteElement.h
+ dolfin/fem/GenericDofMap.h
+ dolfin/fem/LinearVariationalSolver.cpp
+ dolfin/fem/LinearVariationalSolver.h
+ dolfin/fem/NonlinearVariationalSolver.cpp
+ dolfin/fem/NonlinearVariationalSolver.h
+ dolfin/fem/VariationalProblem.cpp
+ dolfin/fem/VariationalProblem.h
+ dolfin/la/LinearSolver.h
+ dolfin/la/Matrix.h
+ dolfin/la/PETScBaseMatrix.cpp
+ dolfin/la/PETScKrylovMatrix.cpp
+ dolfin/la/PETScKrylovMatrix.h
+ dolfin/mesh/ParallelData.cpp
+ dolfin/mesh/ParallelData.h
+Copyright: 2004-2009, Anders Logg and Garth N. Wells
+ 2005-2006, Anders Logg and Garth N. Wells
+ 2005-2010, Anders Logg and Garth N. Wells
+ 2006-2008, Anders Logg and Garth N. Wells
+ 2007-2008, Anders Logg and Garth N. Wells
+ 2007-2010, Anders Logg and Garth N. Wells
+ 2007-2011, Anders Logg and Garth N. Wells
+ 2008-20011 Anders Logg and Garth N. Wells
+ 2008-2011, Anders Logg and Garth N. Wells
+ 2010-2011, Anders Logg and Garth N. Wells
+ 2011, Anders Logg and Garth N. Wells
+License: LGPL-3+
+ FIXME
 
 Files: demo/undocumented/block-matrix/cpp/main.cpp
-	demo/undocumented/block-matrix/python/demo.py
-	demo/undocumented/restriction/python/demo.py
-	demo/undocumented/sym-dirichlet-bc/python/demo.py
-	demo/undocumented/sym-dirichlet-bc/python/dg-demo.py
-	demo/undocumented/sym-dirichlet-bc/python/dg-speed-up-test.py
-	demo/undocumented/sym-dirichlet-bc/python/speed-up-test.py
-	dolfin/la/BlockMatrix.cpp
-	dolfin/la/BlockMatrix.h
-	dolfin/la/BlockVector.cpp
-	dolfin/la/BlockVector.h
-	dolfin/la/EpetraKrylovSolver.cpp
-	dolfin/la/EpetraKrylovSolver.h
-	site-packages/dolfin/mesh/boundarysubdomainfinder.py
-	test/unit/restriction/python/test.py
-Copyright: 2008, Kent-Andre Mardal <kent-and at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/uBLASDummyPreconditioner.cpp
-	dolfin/la/uBLASDummyPreconditioner.h
-	dolfin/la/uBLASKrylovMatrix.cpp
-	dolfin/la/uBLASKrylovMatrix.h
-	dolfin/mesh/Edge.cpp
-	dolfin/mesh/Face.cpp
-	dolfin/mesh/Facet.cpp
-	dolfin/mesh/MeshGeometry.cpp
-	dolfin/mesh/MeshGeometry.h
-	dolfin/mesh/TopologyComputation.h
-	site-packages/dolfin/mesh/meshconvert.py
-	test/unit/mesh/python/test.py
-	utils/convert/dolfin-convert
-	utils/xml/convertall
-Copyright: 2006, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/fem/assembly/cpp/forms.h
-	dolfin/common/real.h
-	dolfin/function/CoefficientAssigner.cpp
-	dolfin/function/CoefficientAssigner.h
-	dolfin/function/FunctionSpace.cpp
-	dolfin/function/FunctionSpace.h
-	dolfin/la/SingularSolver.cpp
-	dolfin/log/Table.cpp
-	dolfin/log/Table.h
-	dolfin/mesh/MeshData.cpp
-	dolfin/mesh/MeshData.h
-	site-packages/dolfin/fem/project.py
-	site-packages/dolfin/function/constant.py
-	site-packages/dolfin/function/specialfunctions.py
-Copyright: 2008-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/lorenz/cpp/main.cpp
-	demo/undocumented/stiff/cpp/TestProblem3.h
-	demo/undocumented/stiff/cpp/TestProblem7.h
-	dolfin/math/Lagrange.cpp
-	dolfin/math/Legendre.cpp
-	dolfin/ode/Dependencies.cpp
-	dolfin/ode/Dependencies.h
-	dolfin/ode/Dual.cpp
-	dolfin/ode/Dual.h
-	dolfin/ode/cGqMethod.cpp
-	dolfin/ode/cGqMethod.h
-	dolfin/ode/dGqMethod.cpp
-	dolfin/quadrature/GaussQuadrature.cpp
-Copyright: 2003-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/fem/speedup/cpp/submit-bench
-	dolfin/swig/Indices.i
-	dolfin/swig/array_typemaps.i
-	dolfin/swig/common_pre.i
-	dolfin/swig/defines.i
-	dolfin/swig/fem_post.i
-	dolfin/swig/la_get_set_items.i
-	dolfin/swig/log_post.i
-	dolfin/swig/log_pre.i
-	dolfin/swig/nls_pre.i
-	dolfin/swig/std_vector_typemaps.i
-	site-packages/dolfin/compilemodules/__init__.py
-	site-packages/dolfin/function/function.py
-Copyright: 2009, Johan Hake <hake at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/common/Variable.cpp
-	dolfin/common/Variable.h
-	dolfin/function/Function.cpp
-	dolfin/function/Function.h
-	dolfin/log/LogStream.h
-	dolfin/log/Logger.cpp
-	dolfin/log/Logger.h
-	dolfin/log/log.cpp
-	dolfin/math/Legendre.h
-	dolfin/quadrature/GaussQuadrature.h
-	dolfin/quadrature/LobattoQuadrature.h
-	dolfin/quadrature/RadauQuadrature.h
-Copyright: 2003-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/mesh/iteration/cpp/main.cpp
-	bench/mesh/refinement/cpp/main.cpp
-	bench/mesh/unitcube/cpp/main.cpp
-	demo/pde/mixed-poisson/cpp/MixedPoisson.ufl
-	dolfin/mesh/Cell.h
-	dolfin/mesh/Edge.h
-	dolfin/mesh/Face.h
-	dolfin/mesh/Facet.h
-	dolfin/mesh/TriangleCell.cpp
-	dolfin/mesh/UniformMeshRefinement.cpp
-	dolfin/mesh/UniformMeshRefinement.h
-	dolfin/mesh/Vertex.h
-Copyright: 2006-2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/bench.py
-	bench/la/vector/access/cpp/main.cpp
-	demo/pde/navier-stokes/cpp/PressureUpdate.ufl
-	demo/pde/navier-stokes/cpp/TentativeVelocity.ufl
-	demo/pde/navier-stokes/cpp/VelocityUpdate.ufl
-	demo/pde/navier-stokes/cpp/main.cpp
-	demo/undocumented/extrapolation/cpp/main.cpp
-	dolfin/la/GenericMatrix.cpp
-	dolfin/mesh/FacetCell.cpp
-	dolfin/mesh/FacetCell.h
-	site-packages/dolfin/mesh/meshfunction.py
-Copyright: 2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/method-weights/cpp/main.cpp
-	demo/undocumented/quadrature/cpp/main.cpp
-	dolfin/log/LogManager.cpp
-	dolfin/math/Lagrange.h
-	dolfin/math/basic.cpp
-	dolfin/math/basic.h
-	dolfin/ode/Method.cpp
-	dolfin/ode/Sample.cpp
-	dolfin/ode/Sample.h
-	dolfin/quadrature/GaussianQuadrature.h
-Copyright: 2003-2005, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/lift-drag/cpp/Drag.ufl
-	demo/undocumented/lift-drag/cpp/Lift.ufl
-	demo/undocumented/periodic/cpp/Poisson.ufl
-	dolfin/common/unittest.h
-	dolfin/fem/UFCMesh.h
-	dolfin/swig/generate.py
-	test/unit/function/cpp/test.cpp
-	test/unit/function/python/test.py
-	test/unit/io/python/test.py
-	test/unit/mesh/cpp/test.cpp
-Copyright: 2007, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/main/init.h
-	dolfin/ode/Adaptivity.h
-	dolfin/ode/Controller.cpp
-	dolfin/ode/Controller.h
-	dolfin/ode/MonoAdaptivity.h
-	dolfin/ode/TimeSlabSolver.h
-	utils/matlab/meshindex.m
-	utils/matlab/plotcontroller.m
-	utils/system/monitor
-Copyright: 2005, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: site-packages/dolfin/adaptivity/dual.py
-	site-packages/dolfin/adaptivity/errorestimator.py
-	site-packages/dolfin/adaptivity/errorestimators.py
-	site-packages/dolfin/adaptivity/formmanipulation.py
-	site-packages/dolfin/adaptivity/marking.py
-	site-packages/dolfin/adaptivity/normestimators.py
-	site-packages/dolfin/adaptivity/residual.py
-	site-packages/dolfin/adaptivity/specialfunctions.py
-Copyright: 2009, - Marie E. Rognes
+ demo/undocumented/block-matrix/python/demo_block-matrix.py
+ demo/undocumented/restriction/python/demo_restriction.py
+ demo/undocumented/sym-dirichlet-bc/python/demo_sym-dirichlet-bc.py
+ demo/undocumented/sym-dirichlet-bc/python/dg-demo.py
+ demo/undocumented/sym-dirichlet-bc/python/dg-speed-up-test.py
+ demo/undocumented/sym-dirichlet-bc/python/speed-up-test.py
+ demo/undocumented/trilinos/python/demo2.py
+ demo/undocumented/trilinos/python/demo_trilinos.py
+ dolfin/la/BlockMatrix.cpp
+ dolfin/la/BlockMatrix.h
+ dolfin/la/BlockVector.cpp
+ dolfin/la/BlockVector.h
+ dolfin/la/EpetraKrylovSolver.cpp
+ dolfin/la/EpetraKrylovSolver.h
+ site-packages/dolfin/mesh/boundarysubdomainfinder.py
+ test/unit/restriction/python/test.py
+Copyright: 2008, Kent-Andre Mardal
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/elasticity/cpp/Elasticity.ufl
+ demo/undocumented/stiff/cpp/TestProblem8.h
+ dolfin/la/PETScKrylovSolver.cpp
+ dolfin/la/PETScKrylovSolver.h
+ dolfin/la/PETScUserPreconditioner.cpp
+ dolfin/la/PETScUserPreconditioner.h
+ dolfin/refinement/RivaraRefinement.cpp
+ dolfin/refinement/RivaraRefinement.h
+ dolfin/swig/dolfin.i
+ dolfin/swig/la_pre.i
+ utils/octave/pdemesh.m
+ utils/octave/pdeplot.m
+ utils/octave/pdesurf.m
+Copyright: 2003-2005, Johan Jansson
+ 2004-2005, Johan Jansson
+ 2005, Johan Jansson
+ 2005-2006, Johan Jansson
+ 2008, Johan Jansson
+ 2009, Johan Jansson
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/advection-diffusion/mesh.xml.gz
+ demo/undocumented/elastodynamics/cpp/dolfin-2.xml.gz
+ demo/undocumented/elastodynamics/python/dolfin-2.xml.gz
+ demo/undocumented/lift-drag/mesh.xml.gz
+ demo/undocumented/stokes-mini/python/dolfin-2.xml.gz
+ demo/undocumented/stokes-stabilized/cpp/dolfin-2.xml.gz
+ demo/undocumented/stokes-stabilized/python/dolfin-2.xml.gz
+ demo/undocumented/stokes-taylor-hood/dolfin-2.xml.gz
+ demo/undocumented/stokes-taylor-hood/python/dolfin-2.xml.gz
+ demo/undocumented/subdomains/cpp/dolfin-2.xml.gz
+ demo/undocumented/subdomains/python/dolfin-2.xml.gz
+Copyright: ²þBe
Y@¹r!Ie­øùI`¥òSŽÉòÚb0r²W‰¸U «³CŠ^jg9kyssc0‰ŠE*™¬íi.Jdälj¹üÙys™é¦^
ç qX‘?3
+ Êì¿ÓéŸñCÒJ¾LˆSZÀÐ-vË&
ï)`áº9Ä-ö
+License: UNKNOWN
+ FIXME
+
+Files: dolfin/fem/DofMapBuilder.cpp
+ dolfin/fem/DofMapBuilder.h
+ dolfin/io/XMLFunctionPlotData.h
+ dolfin/io/XMLMesh.cpp
+ dolfin/io/XMLMesh.h
+ dolfin/io/XMLVector.cpp
+ dolfin/io/XMLVector.h
+ dolfin/ode/ODECollection.cpp
+ dolfin/ode/ODECollection.h
+Copyright: 2002-2006, Anders Logg and Ola Skavhaug
+ 2003-2007, Anders Logg and Ola Skavhaug
+ 2008, Anders Logg and Ola Skavhaug
+ 2009, Anders Logg and Ola Skavhaug
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/elasticity/cpp/main.cpp
+ dolfin/ode/ODE.cpp
+ dolfin/ode/ODE.h
+ dolfin/ode/ODESolver.cpp
+ dolfin/ode/ODESolver.h
+ dolfin/ode/Partition.cpp
+ dolfin/ode/Partition.h
+ dolfin/ode/TimeStepper.cpp
+ dolfin/ode/TimeStepper.h
+Copyright: 2003-2009, Johan Jansson and Anders Logg
+ 2003-2011, Johan Jansson and Anders Logg
+ 2004-2005, Johan Jansson and Anders Logg
+ 2004-2008, Johan Jansson and Anders Logg
+ 2006-2009, Johan Jansson and Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/mesh/MeshHierarchy.cpp
+ dolfin/mesh/MeshHierarchy.h
+ dolfin/mesh/MeshHierarchyAlgorithms.cpp
+ dolfin/mesh/MeshHierarchyAlgorithms.h
+ dolfin/refinement/BisectionRefinement.cpp
+ dolfin/refinement/BisectionRefinement.h
+ dolfin/refinement/LocalMeshCoarsening.cpp
+ dolfin/refinement/LocalMeshCoarsening.h
+Copyright: 2006, Johan Hoffman
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/la/EpetraFactory.cpp
+ dolfin/la/EpetraFactory.h
+ dolfin/la/EpetraMatrix.cpp
+ dolfin/la/EpetraMatrix.h
+ dolfin/la/EpetraSparsityPattern.cpp
+ dolfin/la/EpetraSparsityPattern.h
+ dolfin/la/EpetraVector.cpp
+ dolfin/la/EpetraVector.h
+Copyright: 2008, Martin Sandve Alnes, Kent-Andre Mardal and Johannes Ring
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/common/real.cpp
+ dolfin/la/HighPrecision.cpp
+ dolfin/la/HighPrecision.h
+ dolfin/ode/ODESolution.cpp
+ dolfin/ode/ODESolution.h
+ dolfin/ode/StabilityAnalysis.cpp
+ dolfin/ode/StabilityAnalysis.h
+Copyright: 2008, Benjamin Kehlet
+ 2009, Benjamin Kehlet
+ 2011, Benjamin Kehlet
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/simple/cpp/main.cpp
+ dolfin/io/File.cpp
+ dolfin/io/File.h
+ dolfin/io/GenericFile.cpp
+ dolfin/io/GenericFile.h
+ dolfin/io/PythonFile.cpp
+ dolfin/io/PythonFile.h
+Copyright: 2002-2008, Johan Hoffman and Anders Logg
+ 2002-2009, Johan Hoffman and Anders Logg
+ 2003-2005, Johan Hoffman and Anders Logg
+ 2003-2008, Johan Hoffman and Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/ale/cpp/main.cpp
+ demo/undocumented/ale/python/demo_ale.py
+ dolfin/ale/ALE.cpp
+ dolfin/ale/ALE.h
+ dolfin/ale/ALEType.h
+ dolfin/ale/TransfiniteInterpolation.cpp
+ dolfin/ale/TransfiniteInterpolation.h
+Copyright: 2008, Solveig Bruvoll and Anders Logg
+ 2008-2009, Solveig Bruvoll and Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/curl-curl/cpp/CurrentDensity.ufl
+ demo/undocumented/curl-curl/cpp/EddyCurrents.ufl
+ demo/undocumented/curl-curl/cpp/main.cpp
+ demo/undocumented/curl-curl/python/demo_curl-curl.py
+ dolfin/fem/EqualityBC.cpp
+ dolfin/fem/EqualityBC.h
+Copyright: 2009, Bartosz Sawicki
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/la/MTL4Factory.cpp
+ dolfin/la/MTL4Factory.h
+ dolfin/la/MTL4Matrix.cpp
+ dolfin/la/MTL4Matrix.h
+ dolfin/la/MTL4Vector.cpp
+ dolfin/la/MTL4Vector.h
+Copyright: 2008, Dag Lindbo
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/partitioning/cpp/main.cpp
+ demo/undocumented/partitioning/python/demo_partitioning.py
+ dolfin/io/XMLMatrix.cpp
+ dolfin/io/XMLMatrix.h
+ dolfin/io/XMLParameters.cpp
+ dolfin/io/XMLParameters.h
+Copyright: 2004-2009, Ola Skavhaug and Anders Logg
+ 2008, Ola Skavhaug and Anders Logg
+ 2009, Ola Skavhaug and Anders Logg
+ 2011, Ola Skavhaug and Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: bench/fem/assembly/python/broken
+ dolfin/la/STLFactory.cpp
+ dolfin/la/STLFactory.h
+ test/memory/test.py
+ test/regression/test.py
+Copyright: 2007, Ilmar Wilbers
+ 2008, Ilmar Wilbers
+License: LGPL-3+
+ FIXME
+
+Files: demo/pde/mixed-poisson/cpp/MixedPoisson.ufl
+ demo/pde/mixed-poisson/cpp/main.cpp
+ demo/undocumented/auto-adaptive-poisson/cpp/AdaptivePoisson.ufl
+ demo/undocumented/auto-adaptive-poisson/cpp/main.cpp
+Copyright: 2006-2010, Anders Logg and Marie E. Rognes
+ 2007-2010, Anders Logg and Marie E. Rognes
+ 2010, Anders Logg and Marie E. Rognes
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/waveguide/cpp/Forms.py
+ demo/undocumented/waveguide/cpp/Forms.ufl
+ demo/undocumented/waveguide/cpp/main.cpp
+ demo/undocumented/waveguide/python/demo_waveguide.py
+Copyright: 2008, Evan Lezar
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/la/PETScMatrix.cpp
+ dolfin/la/PETScMatrix.h
+ dolfin/la/PETScVector.cpp
+ dolfin/la/PETScVector.h
+Copyright: 2004-2007, Johan Hoffman, Johan Jansson and Anders Logg
+ 2004-2008, Johan Hoffman, Johan Jansson and Anders Logg
+ 2004-2009, Johan Hoffman, Johan Jansson and Anders Logg
+ 2004-2010, Johan Hoffman, Johan Jansson and Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/fem/SystemAssembler.cpp
+ dolfin/fem/SystemAssembler.h
+ dolfin/la/EpetraLUSolver.cpp
+ dolfin/la/EpetraLUSolver.h
+Copyright: 2008-2009, Kent-Andre Mardal and Garth N. Wells
+ 2008-2010, Kent-Andre Mardal and Garth N. Wells
+License: LGPL-3+
+ FIXME
+
+Files: site-packages/dolfin/compilemodules/expressions.py
+ site-packages/dolfin/compilemodules/subdomains.py
+ site-packages/dolfin_utils/pjobs/pjobs.py
+ site-packages/dolfin_utils/wrappers/capsules.py
+Copyright: 2008-2008, Martin Sandve Alnes
+ 2008-2009, Martin Sandve Alnes
+ 2009, Martin Sandve Alnes
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/graph/ParMETIS.cpp
+ dolfin/graph/ParMETIS.h
+ dolfin/mesh/MeshPartitioning.cpp
+ dolfin/mesh/MeshPartitioning.h
+Copyright: 2008-2009, Niclas Jansson, Ola Skavhaug and Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/common/MPI.cpp
+ dolfin/common/MPI.h
+ test/unit/io/cpp/test.cpp
+Copyright: 2007, Magnus Vikstrøm
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/elastodynamics/cpp/DG0_eps_xx.ufl
+ demo/undocumented/elastodynamics/cpp/ElastoDynamics.ufl
+ demo/undocumented/elastodynamics/cpp/main.cpp
+Copyright: 2009, Mirko Maraldi and Garth N. Wells
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/adaptive-poisson/python/demo_adaptive-poisson.py
+ demo/undocumented/lorenz/python/demo.py
+ demo/undocumented/lorenz/python/plot.py
+Copyright: 2008, Rolv Erlend Bredesen
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/log/Progress.h
+ dolfin/log/log.h
+Copyright: 2003-2008, Anders Logg and Jim Tilander
+ 2003-2011, Anders Logg and Jim Tilander
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/la/CholmodCholeskySolver.cpp
+ dolfin/la/CholmodCholeskySolver.h
+Copyright: 2008, Dag Lindbo and Garth N. Wells
+License: LGPL-3+
+ FIXME
+
+Files: utils/matlab/xmlmatrix.m
+ utils/matlab/xmlvector.m
+Copyright: 2004, Georgios Foufas
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/parameters/cpp/main.cpp
+ demo/undocumented/parameters/python/demo_parameters.py
+Copyright: 2009, Johan Hake and Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: bench/plot.py
+ test/unit/meshconvert/cpp/test.cpp
+Copyright: 2009, Johannes Ring
+ 2010, Johannes Ring
+License: LGPL-3+
+ FIXME
+
+Files: demo/la/eigenvalue/cpp/main.cpp
+ demo/undocumented/dg-advection-diffusion/cpp/AdvectionDiffusion.ufl
+Copyright: 2007, Kristian B. Oelgaard and Garth N. Wells
+ 2007-2010, Kristian B. Oelgaard and Garth N. Wells
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/meshintersection/2D/cpp/main.cpp
+ demo/undocumented/meshintersection/2D/python/demo_2D.py
+Copyright: 2008, Kristoffer Selim
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/elasticity/cpp/gear.xml.gz
+ demo/undocumented/elasticity/python/gear.xml.gz
+Copyright: .•Òðc«ø0Tÿ
ÊVÕºßþjnfÛûuƒ}£×lõß8.µ@(‹!—G«ZW±·w¦X>$ÿ‚Él»’‡­Ï¥)CdƒpçUñgDUäŠK­µðv¶Œ_«çö+òg2OÆrûŠüv:i-¦|,݃cùUæ.•"ì\hQìvöÛ_M¸T6xvÕJ²ÁqU†Ö逶¿ÔÂ
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»Û(q?¾ =#_"_0§ßeuÖö€¬(K­ŒK­ÊÙ
6úlùµï.•3˜)X¨W™xû dq22ë	ÈÑÿ’•ßÝ|—jqë±g}¦¥2.õMš½•a݈Ýu?&ãR+câΫ"†ì÷÷š6.µIV˘IV#û!‹IYêyUø–NéfAÛé±WI§\ùÉ—ZUìP;S‰ž}A¸ÔwNÌKV÷o$y?ÛpÂ¥¾Gu§×/\5:=Ÿ¨šÆ¥búÎä¹°WpSáèÞUz$/•×¯À4mßX)‚	¯Ïw¶§q’ƒ“È/>ï<˧¶w9E/m:¨F¿JhZ
+ ½÷îð¸y¯<ׯßí—<y¯c™
¯	ÿ	¨¤ÄuíÅC)ܲèCYðÖÒ4Z
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+
+Files: demo/undocumented/bcs/cpp/aneurysm.xml.gz
+ demo/undocumented/bcs/python/aneurysm.xml.gz
+Copyright: qä·×µ(
¿KI%¸S‘äÏzièRAýΆÚðø%ÀÚ.\¹~`m`RÄ,û•í˜–úp¢ïÇŽR/™†ý¦‘—šÞKrðK¨MM\4t«‡v´ÑÄ58EXª|£Ù¿$Š"\­&ZXªÄÕ•ñ1™WPºÔ+¤=2£—¿ 6
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,õ'‰ìØ·Ú¤\*Îvbjuo¦–'C}M€¥ÎÀqt%Ë‚ÀkžŒáñ»¡4SÉ<
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+License: UNKNOWN
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+Files: demo/undocumented/plot/cpp/dolfin-2.xml.gz
+ demo/undocumented/plot/python/dolfin-2.xml.gz
+Copyright: 1yIJ–þ
8¾ðbx)²“8ø•˜mz	¹®D¹X,ø²¨r ‰²ˆgCÔ["?\ð+nwF§ 
7t_•
+License: UNKNOWN
+ FIXME
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+Files: COPYING
+Copyright: 2007, Free Software Foundation, Inc. <http://fsf.org/>
+ <year> <name of author>
+ HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS
+ are not
+ disclaimer" for the program, if necessary
+ holder as a result of your choosing to follow a
+ holder explicitly and
+ holder is
+ holder is reinstated (a)
+ holder notifies you of the
+ holder who authorizes use under this
+ holder, and you cure the violation prior to 30 days after
+ holders of
+ if you do
+ law
+ law, except executing it on a
+ on the Program, and are irrevocable provided the stated
+ on the software, and (2) offer you this License
+ permission
+ permission, other than the making of an
+ treaty adopted on 20 December 1996, or
 License: GPL-3+
-
-Files: demo/undocumented/stiff/cpp/TestProblem9.h
-	demo/undocumented/stiff/cpp/main.cpp
-	dolfin/io/XMLObject.h
-	dolfin/ode/dGqMethod.h
-	dolfin/quadrature/LobattoQuadrature.cpp
-	dolfin/quadrature/Quadrature.cpp
-	dolfin/quadrature/Quadrature.h
-	dolfin/quadrature/RadauQuadrature.cpp
-Copyright: 2003-2006, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/mesh/LocalMeshCoarsening.cpp
-	dolfin/mesh/LocalMeshCoarsening.h
-	dolfin/mesh/LocalMeshRefinement.cpp
-	dolfin/mesh/LocalMeshRefinement.h
-	dolfin/mesh/MeshHierarchy.cpp
-	dolfin/mesh/MeshHierarchy.h
-	dolfin/mesh/MeshHierarchyAlgorithms.cpp
-	dolfin/mesh/MeshHierarchyAlgorithms.h
-Copyright: 2006, Johan Hoffman <hoffman at csc.kth.se>
-License: LGPL-2.1
-
-Files: dolfin/la/GenericMatrix.h
-	dolfin/la/GenericVector.h
-	dolfin/la/uBLASILUPreconditioner.cpp
-	dolfin/la/uBLASILUPreconditioner.h
-	dolfin/la/uBLASKrylovSolver.cpp
-	dolfin/la/uBLASKrylovSolver.h
-	dolfin/la/uBLASMatrix.h
-	dolfin/la/uBLASPreconditioner.h
-Copyright: 2006-2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/EpetraFactory.cpp
-	dolfin/la/EpetraFactory.h
-	dolfin/la/EpetraMatrix.cpp
-	dolfin/la/EpetraMatrix.h
-	dolfin/la/EpetraSparsityPattern.cpp
-	dolfin/la/EpetraSparsityPattern.h
-	dolfin/la/EpetraVector.cpp
-	dolfin/la/EpetraVector.h
-Copyright: 2008, Martin Sandve Alnes <martinal at simula.no>, Kent-Andre Mardal <kent-and at simula.no> and Johannes Ring <johannr at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/advection-diffusion/mesh.xml.gz
-	demo/undocumented/elastodynamics/cpp/dolfin-2.xml.gz
-	demo/undocumented/elastodynamics/python/dolfin-2.xml.gz
-	demo/undocumented/lift-drag/mesh.xml.gz
-	demo/undocumented/stokes-taylor-hood/dolfin-2.xml.gz
-	demo/undocumented/stokes-taylor-hood/python/dolfin-2.xml.gz
-	demo/undocumented/subdomains/cpp/dolfin-2.xml.gz
-	demo/undocumented/subdomains/python/dolfin-2.xml.gz
-Copyright: :!n&^B*MBfS+k.HE9J).\B*MfSo~u_cMBQ!f?=?YYaWul=>TxZCP_2t(/&Xa[u4F`J5<{4hXzB2m60Q\;f6;>IqfDj*LR.VIT%aI v:=E1mzb'0173?3#z+FL
-License: UNKNOWN
-
-Files: demo/undocumented/advection-diffusion/cpp/AdvectionDiffusion.ufl
-	demo/undocumented/plot/cpp/main.cpp
-	demo/undocumented/sym-dirichlet-bc/cpp/main.cpp
-	dolfin/mesh/MeshConnectivity.cpp
-	dolfin/mesh/MeshConnectivity.h
-	dolfin/mesh/MeshEntityIterator.cpp
-	test/unit/test.py
-Copyright: 2006-2007, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/fem/speedup/cpp/bench
-	demo/pde/navier-stokes/python/demo.py
-	demo/undocumented/extrapolation/python/demo.py
-	demo/undocumented/extrapolation/python/demo2.py
-	demo/undocumented/interpolation/python/demo.py
-	demo/undocumented/smoothing/python/demo.py
-	site-packages/dolfin/common/memory.py
-Copyright: 2010, + __author__
-License: LGPL-2.1
-
-Files: dolfin/ode/ODE.cpp
-	dolfin/ode/ODE.h
-	dolfin/ode/ODESolver.cpp
-	dolfin/ode/ODESolver.h
-	dolfin/ode/TimeStepper.cpp
-	dolfin/ode/TimeStepper.h
-Copyright: 2003-2009, Johan Jansson <johanjan at math.chalmers.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/MTL4Factory.cpp
-	dolfin/la/MTL4Factory.h
-	dolfin/la/MTL4Matrix.cpp
-	dolfin/la/MTL4Matrix.h
-	dolfin/la/MTL4Vector.cpp
-	dolfin/la/MTL4Vector.h
-Copyright: 2008, Dag Lindbo <dag at csc.kth.se>
-License: LGPL-2.1
-
-Files: demo/undocumented/curl-curl/cpp/CurrentDensity.ufl
-	demo/undocumented/curl-curl/cpp/EddyCurrents.ufl
-	demo/undocumented/curl-curl/cpp/main.cpp
-	demo/undocumented/curl-curl/python/demo.py
-	dolfin/fem/EqualityBC.cpp
-	dolfin/fem/EqualityBC.h
-Copyright: 2009, Bartosz Sawicki
-License: LGPL-2.1
-
-Files: demo/pde/cahn-hilliard/cpp/main.cpp
-	dolfin/io/RAWFile.cpp
-	dolfin/io/RAWFile.h
-	dolfin/io/XYZFile.cpp
-	dolfin/io/XYZFile.h
-Copyright: 2005-2007, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/common/real.cpp
-	dolfin/ode/ODESolution.cpp
-	dolfin/ode/ODESolution.h
-	dolfin/ode/SORSolver.cpp
-	dolfin/ode/SORSolver.h
-Copyright: 2008, Benjamin Kehlet <benjamik at student.matnat.uio.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/built-in/python/demo.py
-	dolfin/common/NoDeleter.h
-	dolfin/la/PETScObject.h
-	dolfin/main/SubSystemsManager.cpp
-	dolfin/main/SubSystemsManager.h
-Copyright: 2008, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/ale/cpp/main.cpp
-	dolfin/ale/ALE.cpp
-	dolfin/ale/ALE.h
-	dolfin/ale/TransfiniteInterpolation.cpp
-	dolfin/ale/TransfiniteInterpolation.h
-Copyright: 2008-2009, Solveig Bruvoll <solveio at ifi.uio.no> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/io/XMLFunctionPlotData.h
-	dolfin/io/XMLMesh.cpp
-	dolfin/io/XMLMesh.h
-	dolfin/ode/ODECollection.cpp
-	dolfin/ode/ODECollection.h
-Copyright: 2009, Anders Logg <logg at simula.no> and Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/adaptive-pde/energy-norm-poisson.py
-	demo/undocumented/adaptive-pde/poisson.py
-	site-packages/dolfin/adaptivity/adaptivedata.py
-	site-packages/dolfin/adaptivity/updates.py
-Copyright: 2010, Marie E. Rognes
-License: GPL-3+
-
-Files: dolfin/la/PETScKrylovSolver.h
-	utils/octave/pdemesh.m
-	utils/octave/pdeplot.m
-	utils/octave/pdesurf.m
-Copyright: 2004-2005, Johan Jansson <johanjan at math.chalmers.se>
-License: LGPL-2.1
-
-Files: demo/undocumented/stiff/cpp/TestProblem1.h
-	demo/undocumented/stiff/cpp/TestProblem4.h
-	demo/undocumented/stiff/cpp/TestProblem5.h
-	demo/undocumented/stiff/cpp/TestProblem6.h
-Copyright: 2004-2006, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/elasticity/cpp/Elasticity.ufl
-	dolfin/la/PETScKrylovSolver.cpp
-	dolfin/la/PETScUserPreconditioner.cpp
-	dolfin/la/PETScUserPreconditioner.h
-Copyright: 2005, Johan Jansson <johanjan at math.chalmers.se>
-License: LGPL-2.1
-
-Files: demo/undocumented/equality/cpp/Poisson.ufl
-	demo/undocumented/stokes-stabilized/cpp/Stokes.ufl
-	demo/undocumented/stokes-taylor-hood/cpp/Stokes.ufl
-	demo/undocumented/sym-dirichlet-bc/cpp/Poisson.ufl
-Copyright: 2005-2007, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: bench/la/vector/assignment/cpp/main.cpp
-	dolfin/la/uBLASDenseMatrix.h
-	dolfin/la/uBLASSparseMatrix.h
-	dolfin/la/ublas.h
-Copyright: 2006, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/GenericSparsityPattern.h
-	dolfin/la/LinearAlgebraFactory.h
-	dolfin/la/PETScFactory.h
-	dolfin/la/uBLASFactory.h
-Copyright: 2007, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/SparsityPatternBuilder.cpp
-	dolfin/la/KrylovSolver.h
-	dolfin/la/SparsityPattern.cpp
-	dolfin/la/SparsityPattern.h
-Copyright: 2007-2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/dg-advection-diffusion/python/demo.py
-	site-packages/dolfin/fem/form.py
-	site-packages/dolfin/function/functionspace.py
-	test/unit/la/python/test.py
-Copyright: 2008, Johan Hake <hake at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/graph/ParMETIS.cpp
-	dolfin/graph/ParMETIS.h
-	dolfin/mesh/MeshPartitioning.cpp
-	dolfin/mesh/MeshPartitioning.h
-Copyright: 2008-2009, Niclas Jansson, Ola Skavhaug <skavhaug at simula.no> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: data/meshes/dolfin-2.xml.gz
-	demo/undocumented/stokes-mini/python/dolfin-2.xml.gz
-	demo/undocumented/stokes-stabilized/cpp/dolfin-2.xml.gz
-	demo/undocumented/stokes-stabilized/python/dolfin-2.xml.gz
-Copyright: ]1vI*SOU)OHf+S)O}xS//@OKy_[nsR_b?
-License: UNKNOWN
-
-Files: demo/undocumented/conditional/cpp/Conditional.ufl
-	demo/undocumented/conditional/cpp/main.cpp
-	demo/undocumented/spatial-coordinates/cpp/SpatialCoordinates.ufl
-Copyright: 2010, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>@gmail.com)
-License: GPL-3+
-
-Files: demo/undocumented/simple/cpp/main.cpp
-	dolfin/io/PythonFile.cpp
-	dolfin/io/PythonFile.h
-Copyright: 2003-2005, Johan Hoffman <hoffman at csc.kth.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/log/LogManager.h
-	dolfin/log/LogStream.cpp
-	dolfin/quadrature/GaussianQuadrature.cpp
-Copyright: 2003-2007, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/log/Event.cpp
-	dolfin/ode/Alloc.cpp
-	dolfin/ode/Alloc.h
-Copyright: 2004-2005, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/nls/NewtonSolver.cpp
-	dolfin/nls/NewtonSolver.h
-	dolfin/nls/NonlinearProblem.h
-Copyright: 2005-2008, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/UmfpackLUSolver.cpp
-	dolfin/la/uBLASVector.cpp
-	dolfin/la/uBLASVector.h
-Copyright: 2006-2008, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/swig/parameter_post.i
-	dolfin/swig/parameter_pre.i
-	dolfin/swig/swig_version.i
-Copyright: 2006-2009, Johan Hake <hake at simula.no>
-License: LGPL-2.1
-
-Files: demo/pde/cahn-hilliard/cpp/CahnHilliard2D.ufl
-	demo/pde/cahn-hilliard/cpp/CahnHilliard3D.ufl
-	dolfin/la/UmfpackLUSolver.h
-Copyright: 2006-2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/main/MPI.cpp
-	dolfin/main/MPI.h
-	test/unit/io/cpp/test.cpp
-Copyright: 2007, Gustav Magnus Vikstrom <gustavv at ifi.uio.no>
-License: LGPL-2.1
-
-Files: bench/fem/assembly/python/broken
-	test/memory/test.py
-	test/regression/test.py
-Copyright: 2008, Ilmar Wilbers <ilmarw at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/io/XMLLocalMeshData.cpp
-	dolfin/mesh/LocalMeshData.cpp
-	dolfin/mesh/LocalMeshData.h
-Copyright: 2008, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/adaptive-poisson/python/demo.py
-	demo/undocumented/lorenz/python/demo.py
-	demo/undocumented/lorenz/python/plot.py
-Copyright: 2008, Rolv Erlend Bredesen <rolv at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/FiniteElement.h
-	dolfin/fem/VariationalProblem.cpp
-	dolfin/fem/VariationalProblem.h
-Copyright: 2008-2009, Anders Logg <logg at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/pde/biharmonic/cpp/main.cpp
-	demo/pde/biharmonic/python/demo.py
-	demo/undocumented/built-in/cpp/main.cpp
-Copyright: 2009, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
-
-Files: demo/undocumented/elastodynamics/cpp/DG0_eps_xx.ufl
-	demo/undocumented/elastodynamics/cpp/ElastoDynamics.ufl
-	demo/undocumented/elastodynamics/cpp/main.cpp
-Copyright: 2009, Mirko Maraldi and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/io/XMLMatrix.cpp
-	dolfin/io/XMLMatrix.h
-	dolfin/io/XMLParameters.h
-Copyright: 2009, Ola Skavhaug <skavhaug at simula.no> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/spatial-coordinates/cpp/main.cpp
-	demo/undocumented/spatial-coordinates/python/demo.py
-	dolfin/swig/documentation.py
-Copyright: 2010, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
-
-Files: bench/function/extrapolation/python/bench
-	demo/undocumented/neumann-poisson/cpp/main.cpp
-	demo/undocumented/neumann-poisson/python/demo.py
-Copyright: 2010, Marie E. Rognes
-License: LGPL-2.1
-
-Files: site-packages/dolfin/adaptivity/adaptive.py
-	site-packages/dolfin/adaptivity/utils.py
-Copyright: 2009-2010, Marie E. Rognes
-License: GPL-3+
-
-Files: demo/undocumented/adaptive-pde/mixed-poisson.py
-	demo/undocumented/adaptive-pde/navier-stokes.py
-Copyright: 2010, Marie Rognes <meg at math.uio.no>
-License: GPL-3+
-
-Files: README
-	demo/undocumented/dielectric/python/demo.py
-Copyright: *No copyright*
-License: LGPL-2.1
-
-Files: dolfin/io/File.h
-	dolfin/io/GenericFile.cpp
-Copyright: 2002-2008, Johan Hoffman <hoffman at csc.kth.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/common/timing.cpp
-	dolfin/log/Progress.cpp
-Copyright: 2003-2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: utils/matlab/xmlmatrix.m
-	utils/matlab/xmlvector.m
-Copyright: 2004, Georgios Foufas
-License: LGPL-2.1
-
-Files: dolfin/la/PETScMatrix.cpp
-	dolfin/la/PETScVector.h
-Copyright: 2004-2008, Johan Hoffman <hoffman at csc.kth.se>, Johan Jansson <johanjan at math.chalmers.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/swig/ode_pre.i
-	dolfin/swig/shared_ptr_classes.i
-Copyright: 2005-2006, Johan Hake <hake at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/io/VTKFile.cpp
-	dolfin/io/VTKFile.h
-Copyright: 2005-2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: bench/fem/convergence/cpp/main.cpp
-	dolfin/common/timing.h
-Copyright: 2005-2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/SLEPcEigenSolver.cpp
-	dolfin/la/SLEPcEigenSolver.h
-Copyright: 2005-2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/meshfunction/cpp/main.cpp
-	dolfin/io/XMLLocalMeshData.h
-Copyright: 2006, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/SparsityPatternBuilder.h
-	dolfin/la/Vector.h
-Copyright: 2007, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/STLFactory.cpp
-	dolfin/la/STLFactory.h
-Copyright: 2007, Ilmar Wilbers <ilmarw at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/DirichletBC.cpp
-	dolfin/fem/DirichletBC.h
-Copyright: 2007-2008, Anders Logg <logg at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/swig/exceptions.i
-	dolfin/swig/numpy_typemaps.i
-Copyright: 2007-2009, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/DofMap.cpp
-	dolfin/fem/DofMap.h
-Copyright: 2007-2010, Anders Logg <logg at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/KrylovSolver.cpp
-	dolfin/la/LUSolver.h
-Copyright: 2007-2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/fem/DofMapBuilder.cpp
-	dolfin/fem/DofMapBuilder.h
-Copyright: 2008, Anders Logg <logg at simula.no> and Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/CholmodCholeskySolver.cpp
-	dolfin/la/CholmodCholeskySolver.h
-Copyright: 2008, Dag Lindbo <dag at csc.kth.se> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/waveguide/cpp/main.cpp
-	demo/undocumented/waveguide/python/demo.py
-Copyright: 2008, Evan Lezar <elezar at sun.ac.za>
-License: LGPL-2.1
-
-Files: dolfin/mesh/RivaraRefinement.cpp
-	dolfin/mesh/RivaraRefinement.h
-Copyright: 2008, Johan Jansson <johanjan at math.chalmers.se>
-License: LGPL-2.1
-
-Files: demo/undocumented/dg-advection-diffusion/cpp/Projection.ufl
-	dolfin/mesh/UnitInterval.cpp
-Copyright: 2008, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
-
-Files: demo/undocumented/meshintersection/2D/cpp/main.cpp
-	demo/undocumented/meshintersection/2D/python/demo.py
-Copyright: 2008, Kristoffer Selim <selim at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/partitioning/cpp/main.cpp
-	demo/undocumented/partitioning/python/demo.py
-Copyright: 2008, Ola Skavhaug <skavhaug at simula.no> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/ale/python/demo.py
-	dolfin/ale/ALEType.h
-Copyright: 2008, Solveig Bruvoll <solveio at ifi.uio.no> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: site-packages/dolfin/compilemodules/expressions.py
-	site-packages/dolfin/compilemodules/subdomains.py
-Copyright: 2008-2008, Martin Sandve Alnes <martinal at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/ITLKrylovSolver.cpp
-	dolfin/la/ITLKrylovSolver.h
-Copyright: 2008-2009, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: site-packages/dolfin/compilemodules/jit.py
-	site-packages/dolfin/function/expression.py
-Copyright: 2008-2009, Johan Hake <hake at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/fem/SystemAssembler.cpp
-	dolfin/fem/SystemAssembler.h
-Copyright: 2008-2009, Kent-Andre Mardal <kent-and at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: bench/fem/jit/python/bench
-	dolfin/mesh/MeshSmoothing.h
-Copyright: 2008-2010, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/GenericLinearSolver.h
-	site-packages/dolfin/common/time.py
-Copyright: 2008-2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/EpetraLUSolver.cpp
-	dolfin/la/EpetraLUSolver.h
-Copyright: 2008-2010, Kent-Andre Mardal <kent-and at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/ode/StabilityAnalysis.cpp
-	dolfin/ode/StabilityAnalysis.h
-Copyright: 2009, Benjamin Kehlet <benjamik at student.matnat.uio.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/parameters/cpp/main.cpp
-	demo/undocumented/parameters/python/demo.py
-Copyright: 2009, Johan Hake <hake at simula.no> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/mesh/PrimitiveIntersector.cpp
-	dolfin/mesh/PrimitiveIntersector.h
-Copyright: 2010, Andr Massing
-License: LGPL-2.1
-
-Files: demo/undocumented/entityintersection/cpp/main.cpp
-	dolfin/mesh/Triangle_3_Tetrahedron_3_do_intersect_SCK.cpp
-Copyright: Massing (am), massing at simula.no
-	2010-02-10 Andr Massing
-	Massing, 2010
-License: LGPL-2.1
-
-Files: demo/undocumented/waveguide/cpp/Forms.py
-	demo/undocumented/waveguide/cpp/Forms.ufl
-Copyright: 2008, Evan Lezar <elezar at sun.ac.za>
-License: UNKNOWN
-
-Files: demo/undocumented/trilinos/python/demo.py
-	demo/undocumented/trilinos/python/demo2.py
-Copyright: 2008, Kent-Andre Mardal <kent-and at simula.no>
-License: UNKNOWN
-
-Files: COPYING
-	doc/manual/chapters/license.tex
-Copyright: the
-	1991, 1999, Free Software Foundation, Inc
-License: UNKNOWN
-
-Files: debian/cdbs/1/rules/copyright-check.mk
-Copyright: \s*(\S.*?)\s*\
-License: GPL
-
-Files: doc/manual/fenicsmanual.cls
-Copyright: 2005-2007, Anders Logg <logg at simula.no>
-License: GPL-2
-
-Files: debian/licensecheck
-Copyright: 2007-2008, Adam D. Barratt
-License: GPL-2+
-
-Files: site-packages/dolfin_utils/wrappers/functionspace.py
-Copyright: 2008, Martin Sandve Alnes <martinal at simula.no>
-License: GPL-3+
-
-Files: site-packages/dolfin_utils/wrappers/form.py
-Copyright: 2008-2009, Martin Sandve Alnes <martinal at simula.no> and Anders Logg <logg at simula.no>
-License: GPL-3+
-
-Files: site-packages/dolfin_utils/wrappers/wrappers.py
-Copyright: 2008-2009, Martin Sandve Alnes <martinal at simula.no>
-License: GPL-3+
-
-Files: demo/undocumented/reaction-diffusion/cpp/ReactionDiffusion.ufl
-Copyright: 2009, Anders Logg <logg at simula.no>
-License: GPL-3+
-
-Files: demo/undocumented/conditional/python/demo.py
-Copyright: 2010, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: GPL-3.0
+ FIXME
 
 Files: dolfin/mesh/predicates_init.h
 Copyright: *No copyright*
 License: LGPL-2+
-
-Files: doc/manual/algorithm.sty
-Copyright: -- 1994, Peter Williams
-License: LGPL-2+
-
-Files: dolfin/main/dolfin_doc.h
-Copyright: 2003-2006, Anders Logg <logg at simula.no>
-License: LGPL-2.1 (GENERATED FILE)
-
-Files: dolfin/fem/Form.h
-Copyright: 2007-2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1 (GENERATED FILE)
-
-Files: demo/undocumented/tensor-weighted-poisson/python/demo.py
-Copyright: 2009, Anders Logg <logg at simula.no>
-License: LGPL-2.1 (GENERATED FILE)
-
-Files: dolfin/la/LUSolver.cpp
-Copyright: 20010 Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/io/XMLVector.cpp
-Copyright: 2002-2006, Anders Logg <logg at simula.no> and Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/io/XMLObject.cpp
-Copyright: 2002-2006, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/harmonic/cpp/main.cpp
-Copyright: 2002-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/io/File.cpp
-Copyright: 2002-2009, Johan Hoffman <hoffman at csc.kth.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
+ FIXME
+
+Files: README
+Copyright: *No copyright*
+License: LGPL-3+
+ FIXME
 
 Files: utils/matlab/plotslab.m
-Copyright: 2003, Johan Hoffman <hoffman at csc.kth.se> and Anders Logg <logg at simula.no>
-	2003-2005, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/stiff/cpp/TestProblem8.h
-Copyright: 2003-2005, Johan Jansson <johanjan at math.chalmers.se>
-License: LGPL-2.1
-
-Files: dolfin/io/XMLVector.h
-Copyright: 2003-2007, Anders Logg <logg at simula.no> and Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/log/Progress.h
-Copyright: 2003-2008, Anders Logg <logg at simula.no> and Jim Tilander <jt at dd.chalmers.se>
-License: LGPL-2.1
-
-Files: dolfin/io/GenericFile.h
-Copyright: 2003-2008, Johan Hoffman <hoffman at csc.kth.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/log/log.h
-Copyright: 2003-2009, Anders Logg <logg at simula.no> and Jim Tilander <jt at dd.chalmers.se>
-License: LGPL-2.1
+Copyright: 2003, Johan Hoffman
+ 2003-2005, Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: site-packages/dolfin_utils/meshconvert.py
+Copyright: 2006, Anders Logg
+ for c in (c0, c1, c2)
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/dg-poisson/cpp/main.cpp
+Copyright: 2006-2008, Anders Logg and Kristian B. Oelgaard
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/assembly/cpp/main.cpp
+Copyright: 2008, Anders Logg and Magnus Vikstrøm
+License: LGPL-3+
+ FIXME
+
+Files: bench/fem/assembly/cpp/main.cpp
+Copyright: 2008-2010, Dag Lindbo, Anders Logg and Ilmar Wilbers
+License: LGPL-3+
+ FIXME
 
 Files: utils/matlab/xmlmesh.m
-Copyright: 2004, Erik Svensson <eriksv at math.chalmers.se>
-License: LGPL-2.1
-
-Files: doc/manual/chapters/contributing-dolfin.tex
-Copyright: 2004-2005, Johan Hoffman <hoffman at csc.kth.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/ode/Partition.h
-Copyright: 2004-2005, Johan Jansson <johanjan at math.chalmers.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/log/Event.h
-Copyright: 2004-2007, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/PETScVector.cpp
-Copyright: 2004-2007, Johan Hoffman <hoffman at csc.kth.se>, Johan Jansson <johanjan at math.chalmers.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/stiff/cpp/TestProblem2.h
-Copyright: 2004-2008, Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/ode/Partition.cpp
-Copyright: 2004-2008, Johan Jansson <johanjan at math.chalmers.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
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-Files: dolfin/la/LinearSolver.h
-Copyright: 2004-2009, Anders Logg <logg at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
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-Files: dolfin/la/PETScMatrix.h
-Copyright: 2004-2009, Johan Hoffman <hoffman at csc.kth.se>, Johan Jansson <johanjan at math.chalmers.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
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-Files: dolfin/io/XMLParameters.cpp
-Copyright: 2004-2009, Ola Skavhaug <skavhaug at simula.no> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/nonlinear-poisson/cpp/NonlinearPoisson.ufl
-Copyright: 2005, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/la/PETScKrylovMatrix.cpp
-Copyright: 2005-2006, Anders Logg <logg at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
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-Files: dolfin/swig/dolfin.i
-Copyright: 2005-2006, Johan Jansson <johanjan at math.chalmers.se>
-License: LGPL-2.1
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-Files: dolfin/la/PETScFactory.cpp
-Copyright: 2005-2006, Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
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-Files: dolfin/la/PETScKrylovMatrix.h
-Copyright: 2005-2010, Anders Logg <logg at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: utils/vim/macros
-Copyright: 2006, :r !echo $USER ~$a.kJo// Licensed under the GNU LGPL Version 2.1.//// First added: :r !date +'\%F'kJo// Last changed: :r !date +'\%F'kJo#ifndef __FOO_H#define __FOO_H #include <dolfin/constants.h> namespace dolfin{ /// Documentation of class Foo class Foo{public: /// ConstructorFoo(); /// Destructor~Foo(); private: }; } #endif:%s/Foo/\=@a/g :%s/FOO/\=@b/g
-	2006, :r !echo $USER ~$a.kJo// Licensed under the GNU LGPL Version 2.1.//// First added: :r !date +'\%F'kJo// Last changed: :r !date +'\%F'kJo#include <dolfin/Foo.h> using namespace dolfin; //-----------------------------------------------------------------------------Foo::Foo(){// Do nothing}//-----------------------------------------------------------------------------Foo::~Foo(){// Do nothing}//-----------------------------------------------------------------------------:%s/Foo/\=@2/g
-License: LGPL-2.1
-
-Files: demo/undocumented/nonlinear-poisson/cpp/main.cpp
-Copyright: 2006-2007, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/dg-poisson/cpp/Poisson.ufl
-Copyright: 2006-2007, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: dolfin/la/Matrix.h
-Copyright: 2006-2008, Anders Logg <logg at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/dg-poisson/cpp/main.cpp
-Copyright: 2006-2008, Anders Logg <logg at simula.no> and Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
-
-Files: demo/undocumented/elasticity/cpp/main.cpp
-Copyright: 2006-2009, Johan Jansson <johanjan at math.chalmers.se> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
-
-Files: test/unit/la/cpp/test.cpp
-Copyright: 2007, Johan Hake <hake at simula.no>
-License: LGPL-2.1
-
-Files: demo/undocumented/dg-advection-diffusion/cpp/AdvectionDiffusion.ufl
-Copyright: 2007, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/mesh/PointCell.h
-Copyright: 2007-2007, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
-
-Files: dolfin/fem/Form.cpp
-Copyright: 2007-2008, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/dg-advection-diffusion/cpp/main.cpp
-Copyright: 2007-2008, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>, Anders Logg <logg at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: dolfin/mesh/PointCell.cpp
-Copyright: 2007-2008, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
-License: LGPL-2.1
-
-Files: dolfin/swig/typemaps.i
-Copyright: 2007-2009, Anders logg
-License: LGPL-2.1
-
-Files: demo/pde/mixed-poisson/cpp/main.cpp
-Copyright: 2007-2010, Anders Logg <logg at simula.no> and Marie Rognes <meg at math.uio.no>
-License: LGPL-2.1
-
-Files: demo/la/eigenvalue/cpp/main.cpp
-Copyright: 2007-2010, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
-
-Files: demo/undocumented/assembly/cpp/main.cpp
-Copyright: 2008, Anders Logg <logg at simula.no> and Gustav Magnus Vikstrom <gustavv at ifi.uio.no>
-License: LGPL-2.1
-
-Files: site-packages/dolfin/common/plot.py
-Copyright: 2008, Joachim B. Haga <jobh at broadpark.no>
-License: LGPL-2.1
-
-Files: dolfin/mesh/UnitSphere.h
-Copyright: 2008, Nuno David Lopes <ndl at ptmat.fc.ul.pt>
-License: LGPL-2.1
-
-Files: dolfin/main/mpiutils.h
-Copyright: 2008-2009, Niclas Jansson, Anders Logg <logg at simula.no> and Ola Skavhaug <skavhaug at simula.no>
-License: LGPL-2.1
-
-Files: bench/fem/assembly/cpp/main.cpp
-Copyright: 2008-2010, Dag Lindbo <dag at csc.kth.se>, Anders Logg <logg at simula.no>, Ilmar Wilbers <ilmarw at simula.no>
-License: LGPL-2.1
-
-Files: demo/pde/hyperelasticity/python/demo.py
-Copyright: 2008-2010, Johan Hake <hake at simula.no> and Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
+Copyright: 2004, Erik Svensson
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/courtemanche/cpp/main.cpp
+Copyright: Glenn Terje Lines, Ola Skavhaug and Simula Research Laboratory
+License: LGPL-3+
+ FIXME
 
 Files: site-packages/dolfin/common/donothing.py
-Copyright: 2009, + __author__
-License: LGPL-2.1
-
-Files: dolfin/common/Set.h
-Copyright: 2009, Garth N. Wellls
-License: LGPL-2.1
+Copyright: 2009, Hans Petter Langtangen
+License: LGPL-3+
+ FIXME
+
+Files: demo/pde/hyperelasticity/cpp/HyperElasticity.ufl
+Copyright: 2009-2010, Harish Narayanan and Garth N. Wells
+License: LGPL-3+
+ FIXME
 
 Files: demo/pde/hyperelasticity/cpp/main.cpp
 Copyright: 2009, Harish Narayanyan
-License: LGPL-2.1
-
-Files: dolfin/swig/la_pre.i
-Copyright: 2009, Johan Jansson <johanjan at math.chalmers.se>
-License: LGPL-2.1
-
-Files: test/unit/meshconvert/cpp/test.cpp
-Copyright: 2009, Johannes Ring <johannr at simula.no>
-License: LGPL-2.1
+License: LGPL-3+
+ FIXME
+
+Files: site-packages/dolfin/common/plot.py
+Copyright: 2008, Joachim B. Haga
+License: LGPL-3+
+ FIXME
+
+Files: demo/pde/hyperelasticity/python/demo_hyperelasticity.py
+Copyright: 2008-2010, Johan Hake and Garth N. Wells
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/dg-poisson/cpp/Poisson.ufl
+Copyright: 2006-2007, Kristian B. Oelgaard and Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/dg-advection-diffusion/cpp/main.cpp
+Copyright: 2007-2008, Kristian B. Oelgaard, Anders Logg and Garth N. Wells
+License: LGPL-3+
+ FIXME
 
 Files: demo/pde/biharmonic/cpp/Biharmonic.ufl
-Copyright: 2009, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>, Garth N. Wells <gnw20 at cam.ac.uk> and Anders Logg <logg at simula.no>
-License: LGPL-2.1
+Copyright: 2009, Kristian B. Oelgaard, Garth N. Wells and Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: demo/undocumented/auto-adaptive-poisson/python/demo_auto-adaptive-poisson.py
+Copyright: 2011, Marie E. Rognes and Anders Logg
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/common/mpiutils.h
+Copyright: 2008-2009, Niclas Jansson, Anders Logg and Ola Skavhaug
+License: LGPL-3+
+ FIXME
+
+Files: dolfin/mesh/UnitSphere.h
+Copyright: 2008, Nuno Lopes
+License: LGPL-3+
+ FIXME
 
 Files: dolfin/fem/ufcexp.h
 Copyright: 2009, Shawn W. Walker
-License: LGPL-2.1
-
-Files: site-packages/dolfin/common/globalparameters.py
-Copyright: 2009-2010, + __author__
-License: LGPL-2.1
-
-Files: dolfin/common/Array.h
-Copyright: 2009-2010, Garth N. Wells <gnw20 at cam.ac.uk>
-License: LGPL-2.1
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-Files: test/unit/quadrature/python/test.py
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-Files: dolfin/quadrature/BarycenterQuadrature.cpp
-Copyright: 2010-03-17 Andr Massing
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-Files: dolfin/quadrature/BarycenterQuadrature.h
-Copyright: 2010-03-17 Andr Massing
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-Files: bench/function/evaluation/cpp/main.cpp
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-Files: demo/undocumented/courtemanche/cpp/main.cpp
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-Files: dolfin/mesh/cgal_includes.h
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-Copyright: Massing (am), massing at simula.no
-	Massing, 2010,
-	2010, Andr Massing
-License: LGPL-2.1
+License: LGPL-3+
+ FIXME
+
+Files: data/meshes/trimesh-64.xml.gz
+Copyright: 
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/dolfin-1.xml.gz
+Copyright: h3Nä˜#-BP*y\ £
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//
// First added: :r !date +'\%F'
kJo// Last changed: :r !date +'\%F'
kJo
#ifndef __FOO_H
#define __FOO_H #include <dolfin/constants.h> namespace dolfin
{ /// Documentation of class Foo class Foo
{
public: /// Constructor
Foo(); /// Destructor
~Foo(); private: }; } #endif:%s/Foo/\=@a/g :%s/FOO/\=@b/g
+ 2006, :r !echo $USER ~$a.kJo// Licensed under the GNU LGPL Version 2.1.
//
// First added: :r !date +'\%F'
kJo// Last changed: :r !date +'\%F'
kJo
#include <dolfin/Foo.h> using namespace dolfin; //-----------------------------------------------------------------------------
Foo::Foo()
{
// Do nothing
}
//-----------------------------------------------------------------------------
Foo::~Foo()
{
// Do nothing
}
//-----------------------------------------------------------------------------:%s/Foo/\=@2/g
+License: UNKNOWN
+ FIXME
 
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+Files: debian/copyright
+Copyright: 1994, Peter Williams
+ 20010 Garth N. Wells <gnw20 at cam.ac.uk>
+ 2002-2006, Anders Logg <logg at simula.no>
+ 2002-2008, Anders Logg <logg at simula.no>
+ 2002-2008, Johan Hoffman <hoffman at csc.kth.se>
+ 2002-2009, Johan Hoffman <hoffman at csc.kth.se>
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+ 2005, Johan Jansson <johanjan at math.chalmers.se>
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+ 2008-2010, Kent-Andre Mardal <kent-and at simula.no>
+ 2009, Anders Logg <logg at simula.no>
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+ 2009, Johan Jansson <johanjan at math.chalmers.se>
+ 2009, Johannes Ring <johannr at simula.no>
+ 2009, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
+ 2009, Marie E. Rognes <meg at simula.no>
+ 2009, Martin Sandve Alnes <martinal at simula.no>
+ 2009, Mirko Maraldi
+ 2009, Ola Skavhaug <skavhaug at simula.no>
+ 2009, Shawn W. Walker <walker at courant.nyu.edu>
+ 2009-2010, Anders Logg <logg at simula.no>
+ 2009-2010, Garth N. Wells <gnw20 at cam.ac.uk>
+ 2009-2010, Harish Narayanan <harish at simula.no>
+ 2009-2010, Marie E. Rognes <meg at simula.no>
+ 2010, Anders Logg <logg at simula.no>
+ 2010, Andre Massing <massing at simula.no>
+ 2010, Garth N. Wells <gnw20 at cam.ac.uk>
+ 2010, Johannes Ring <johannr at simula.no>
+ 2010, Kristian B. Oelgaard <k.b.oelgaard at tudelft.nl>
+ 2010, Marie E. Rognes <meg at simula.no>
+ 2010, Marie Rognes <meg at math.uio.no>
+ 22010 Anders Logg <logg at simula.no>
+ Kristen Kaasbjerg <cosby at fys.ku.dk>
+License: UNKNOWN
+ FIXME
+
+Files: COPYING.LESSER
+Copyright: 2007, Free Software Foundation, Inc. <http://fsf.org/>
+ notices during
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/tetmesh_24_8_8.xml.gz
+Copyright: JÏÓ_(
7œÑ^Ä	
ÖÒ9÷ð9º
È{•F éæî^šFÅið³£ôl™³Ò|
¥ç/”ÂÎL/ bké
Ì{ø<ÝŽæ½J#€ts/M#c„4x‹ÅQz¶ìYL;JÏ3_(
7œ9^Ä	×Ò9 ÷ð¹º
Ð{•-ÝÜÓKÓèX,

㬎ң@¥ì(=Ïz¡ÞpVy$
+ NO/œÂ[Ok/ꀄÂoé–%|¾H fýíå¶N/ê$ÝãëÓt¡N}Íâ8=[N.ä¤?¿,z›/œÂ[OO/ꀄòoé–'|¾Hfýýå¶N/ê$ÝãÓ«Ó„¡NÏñê8=ŠDpêŽÓSÖ§ðÖÓÇ‹: ¡œAºe
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/circle.xml.gz
+Copyright: K2l
+ ‘2£‹NP¡HZ‚H. –®Í_?R3É %_Ûf¾Ê-æÚòu J¾¤E¾^$÷Mz °dÃiîMz+Ñd¾Ê
+License: UNKNOWN
+ FIXME
+
+Files: debian/changelog
+Copyright: Keep up-to-date with new and removed files
+ Update for new and removed files
+ checks
+License: UNKNOWN
+ FIXME
 
 Files: cmake/modules/FindGMP.cmake
 Copyright: 2006, Laurent Montel, <montel at kde.org>
 License: UNKNOWN
-
-Files: data/meshes/circle.xml.gz
-Copyright: 2NPHZH._?R3%_f-uJE^$MzdiMz+d
-	K2l
-License: UNKNOWN
+ FIXME
+
+Files: dolfin/io/base64.cpp
+Copyright: 2004-2008, Renà Nyffenegger
+ Nyffenegger rene.nyffenegger at adp-gmbh.ch
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/tetmesh_backward_facing_step_32_8_8.xml.gz
+Copyright: OÛ÷ÄSøÄJŸ:›ThL*$”|ÖMRNBVä9ï7º„’Õø
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/tetmesh_bluff_body_32_8_8.xml.gz
+Copyright: O
Eâ):m,ës*õÍm‡‘QòY7I9
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/sphere.xml.gz
+Copyright: 6`㜂	×Eñ¸¸uXè,<”¹R˜LÝ2a¥÷&‘èÊô&£ IšÊÙyl[2·’	‘[bç-kMêØ(RMeçÐè€k3+£à‘j(âµÎƒ¡ˆ!ŒDú—$>œômŒE4I*n}ÔŸ?à1+!·šÊˆ„d†z+f–<Dâ

jˆ¹}Dð¶1ÏN÷²ì§‘£À‘ð‘1ª¥Áÿ³iƒ#ÇF’¥ç¹Â×2ãöȱ‘H$ ììâÞ+ÓˆÄ$ż
+License: UNKNOWN
+ FIXME
+
+Files: demo/undocumented/tensor-weighted-poisson/python/c01.xml.gz
+Copyright: eîV¤ÐuWAlýîžõ–ñüG°
¼o¸@ˆyßðsžÿ¨õÆ7\ -ìÙÄÝÒ‚ºÙZ1[àû†$Ý"ŸÜ-.H¡›Í)s·º 
Úû§UvüëåGtðsqAxüciAxúsaAt

ωdK{Í	eëzÓ‰äsAAxü²œ <‹Š7­æÇR‚ðôçB‚ðøuAxøsAt|ëuÎ|+uÝyà¨tÆÑÏÅáñ¥áiT9+ÁQä¬ÿö碁ðøÇ’ðô炁èøVߌ³Ÿ‹ÂãKÂÓŸÂã×eáa½Ìe%øÖ׬H>„Ç¿^
ÀÁ?üþ×s?þé‡_^ÿûŸ~øé§_¾ûåÇÿùáßŸ¿~$óüÛ¿ýø~þçŸ~Ðòùÿãñåÿ;~ûïþÇùÇïŸßMÿw‰ãøõ«oŠœ_ãr¾ˆåøõ»rŠÔ/ÈùB^DˆöN4é_òQX# Æñë·ñ™_úQX3 Öñë·÷9^o¾}a׊ã
ùõμÞ}ÿ¼"{~‹ò†üÚ"äÌëí/Ì+²zDH{C~m,ræõþçF‘2ސz8Ì+ÖëV*´1덧Áœ¯
8tý\x™w¨R	xÝèCáE7ú,ïP­ôÊ„ãu­

+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/tetmesh-4.xml.gz
+Copyright: f¥À:X0OéAv$A™dbd#­¨LÔlìÄ,-àq¶-`' =e[A”
+License: UNKNOWN
+ FIXME
+
+Files: demo/undocumented/tensor-weighted-poisson/python/mesh.xml.gz
+Copyright: qJÊCjíÉ
ʃԄ8%塃NµödåÔAjBœ’òÐA§ƒZ{²‡rê 5!ÎHåÔó ÓA­ý„1”S	qJÊCjm5ʃdBœ‘xˆNµ¶šŒ­ÝI&ĉ‡èt¤ÖßÜ
[¿“Lˆ3‘¸H­¿¹;¶y'™'䎇H\Pë«É¾ÝI&ĉ‡ètPë«É~ÜI&Ä)t:¨õÕD9uLˆ3R
:étP뫉rê ™g¤<tÒé ÖWåÔA2!NHåÔó¤ÓA­¯&ʃdBœ‘òÐI§ƒZ_M”SÉ„8#ñj}59ڝdBœ‘xˆNGjýÍÝqô;É„8#ñ‰‹Ôú›»ã˜w’	qBžxˆÄµ¾šœÛdBœ‘xˆNµ¾šœÇdBœ‘òP£ÓA­¯&ʃdBœ‘òP£ÓA­¯&äԐLˆ3R
jt:¨õÕ„œ’	qB’Sëænttþæî §†dBœ‘òP£»B­¯&äԐLˆ3Ñ
+License: UNKNOWN
+ FIXME
+
+Files: ChangeLog
+Copyright: statements to SWIG interface files (not finished yet)
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/tetmesh-8.xml.gz
+Copyright: ŠÈïr—pƒË®\ÐÇ:¹è¾IÑ{tÚ(ÈÕø
Š¤ß
Ö¥*rPpvÏ¢NÕQD~—»„\Få‚>ÖÉEîtäjE3öhø(³*â	=ÚïŽEëR9(8»£(‚Su‘ßå.ášËuT.èc\äNG®öP´b.¥WE<¡GûÝë¤uŠ
œÝ«(‚Su‘ßå.á—Y¹ urÑ;½HÑŽ=š>Ê®ŠxBö»×MëR(ÈÕb0=œªT4Éïr—pƒK¯\ÐÇ:¹Èž')ºc–2ª"šÐcø
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/two_particles.xml.gz
+Copyright: ŽË£¬5rTa;{ð¨
ëðÙù”•±ƒ‰ËÉÊ#  ~”~ԏF7dŒá|,ÖY¶GòdµŸQ-+Æxr቗9|öf	Ò~ª
u•ÏfÒ3çòOµÃô¨ÿÍäÓM“Ì
ÛžH渆6ÊÉ/¢üáøc°õÝ3íÑ·Žõlfcûî^+†íwB
~êöÃOYãÙòHh(-C
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8ë³túÛ—gvSöcº;Ìç¿?[éûqbÙ/F2Š²_÷£
—ºÆœý‘ºÄ󣘺ãy»à·eá1õ
+License: UNKNOWN
+ FIXME
+
+Files: demo/undocumented/waveguide/waveguide_TM_cutoff_modes.pdf
+Copyright: “22±_¦Ç¢‹Ú°Oì8Í0sqC»æù3ö™ïqÍ.4o_¬uãÆ£5`‚AÖQDz{­Ä<Š¢
|žt*ݍhTFßäø탋áHÇT¼@éÙÁÎŽvë»Ý®y‡™cÎyU–
Ͳ O×z?ZÂ
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/dolfin-2.xml.gz
+Copyright: ž9?šµK2`UÀž£hR^#™5ê9÷uK2Y#™5†£4n-‰„5’Yk¹ûƒ»Ë¾‘ÌÚüúÚ'<Þ®î‘QѶÒû–üŒ5fç^î}ë
œt’l˜>{DŒŒµÆÉO¾.U§!'ª[ÆÚNÜ‚À¢O“<­FÅ€úæ}žfJf¬Q0 j¿l*.UÝíØ×”
Þ¥CnÄXO*É0f˜Äù1Vkô¬ÇýË˾
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/aneurysm.xml.gz
+Copyright: ¥’±*í*9>¬DJYUÛôÙÏøx’G[¼wŽÏçøóI–ˆkâ+5'ò^;:?§8¿9¦

s²9¦a¹£Ãmµåè”
$ôRïŽðnC‚ʤÞ
á
+ ¹µ«ðÁ}ÐVL
+License: UNKNOWN
+ FIXME
 
 Files: data/meshes/snake_hole.xml.gz
-Copyright: 5`CR
-	M at J2J?.Xe@
-License: UNKNOWN
-
-Files: data/meshes/two_particles.xml.gz
-Copyright: 5rTa;{#~~F7d|,YGdQ-+xr9|f~uf3OMH6/c3lfc^+wB~OYHh(-C/8tgvSc;?[qb/F2_ye1
-License: UNKNOWN
-
-Files: data/meshes/tetmesh_bluff_body_32_8_8.xml.gz
-Copyright: E
-License: UNKNOWN
-
-Files: dolfin/io/base64.cpp
-Copyright: Nyffenegger rene.nyffenegger at adp-gmbh.ch
-	2004-2008, Ren Nyffenegger
-	|| (c == '+') || (c == '/'));
-License: UNKNOWN
-
-Files: data/meshes/sphere.xml.gz
-Copyright: d80#.ZWRWPd_
-	=1-(%^,o`&N*>~raG_<M\Q |ex8dw4?Qzo=,jBw.!UA0Yx[
-License: UNKNOWN
+Copyright: §kÄ,;€†k˜·²fì[„öI¸Šy.23Ýiž Æ´lC4¬äP}ë¹çâ*ÄŸiüê¥ãF€(‰ä´r>åÅJá›õ*¿k¥@9½Ë
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/gear.xml.gz
+Copyright: ª1QLš˜5üù8.5Õ'
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/cylinder.xml.gz
+Copyright: ª¾ãjÛ¯Ï+Žµ+b°È
m½u£>¾b_Þ}yc§éû^b¶›s;fÀÃ(uÎaÎm{­
cÔÀ¯¯ô¦¸Ž“ó0TÉËîöhÇJæ`¨’—Ëܧż	 ö{ó’ÅbŽ/—ù{Üíܼ˛êïM¶æ
í&ÿô†yÍ#Ú¿aEè>èÿÞÔܸaÎ
sYÀ›f{Ãœé>E`¹wŠ±aym BûÇk+½*Ø?³³‰ÎúÏlT†/³
+License: UNKNOWN
+ FIXME
+
+Files: data/meshes/trimesh-128.xml.gz
+Copyright: ««Á(B^_g£W܆Ý;3••ì¦ú|ë.÷|¢¦ªá'Œ¾{¢¥hÛ›äB´é¦Ýx>á3V£fÆb5ᙞOL-kÃWñMx\¿ÐStM¿‚P×(FéºÐS4ÍPÆÖfl3YD–~d¼{æ0ÆBO‰fî¸á’tzŠ•i¼„0¿_ºï.w™ECV`_Æa¡¨Ø™-š¿MZ(*vöséâ[wÒBQAÆÁjdÑ4Sá¬Ì¦Âöºn•ESL¾@*ê•C”LŒn˜¤bfMÇ«}t3{\(*ªf@»À|*¦ÂXB*ZgõÖ™±·93Ö¥¦`~¨
+License: UNKNOWN
+ FIXME
 
 Files: data/meshes/trimesh-32.xml.gz
-Copyright: eP,v8KKTpri.,*#Hd!gN~E1eLl_LbI
-License: UNKNOWN
-
-Files: demo/undocumented/tensor-weighted-poisson/python/c01.xml.gz
-Copyright: eVuWAlGo at ys7\-Z1[$-.H)s UvGtsqAxciAxsaAtdK{ezsAAx <7RBuAxsAt|u|+uytiT9+QVKeae%H>^?s?_^~_~$~~;~Mwo_rr/B^DN4_QX# _QX3 9^o}a}{~/+zDH{C~m,rF2z8+V*18t\xwRxCE7,Pu
-License: UNKNOWN
-
-Files: data/meshes/tetmesh-4.xml.gz
-Copyright: f:X0OAv$Adbd#Ll,-q-`'=e[A
-License: UNKNOWN
-
-Files: doc/progr_reference/html/head-doc_transparent.png
-Copyright: ghH^/8i4bnWp8;>+P 4A6m2bkWiui$Nb# /m5PgeYDU*X9 Zo~Jy|Bpp:I=Ldm(maj6ojCjc 7y;'`A,TQG5uXi(m0Q~$b[~`fiNQE7YeYGu6.~gmR9*4PqQbywEnsnI*LOdYb(O%Cuc!{{? -\MKJeJ4^J (+l at Q:jfggYI IR,FOk6QE(P(PUU$I\.3t*B+J!G(
-License: UNKNOWN
-
-Files: data/meshes/cylinder.xml.gz
-Copyright: j++bmu>b_}yc^bs;f(uam{c0ThJ`{b/{M&y#aE>asYf{>E`waymBk+*?lT/
-License: UNKNOWN
-
-Files: data/meshes/torso.xml.gz
-Copyright: q,NM
-License: UNKNOWN
-
-Files: demo/undocumented/tensor-weighted-poisson/python/mesh.xml.gz
-Copyright: qJCj8%NdAjBAZ{r 5!HA1SqJCjm5dBxNI&t[L3H;y''H\PI&tP~I&)t:D9uL3R:tPr g<tWA2!NHA&dBIZ_MS8#j}59dBxNGjq;8#wqBxdBxNdBPA&dBPA&L3Rjt:qBSntt dBPB&L3
-License: UNKNOWN
-
-Files: data/meshes/trimesh-64.xml.gz
-Copyright: uXz1!0P['`r{3 VMS><~@@S'hm1J2FbY(7X,7YGA:<Oy'`=y
-License: UNKNOWN
-
-Files: data/meshes/tetmesh-16.xml.gz
-Copyright: u\;,!3%1 at 3rmu`wdd3l_c, ?Ia`2=)sZMkAEj~DH<QbX,Dxj>4jz2rT_|<N0{VD2%=Z Fy_m#I[VDs7r6h%(=l8}?+5lW0ADe&h{'JY&Ibg>*Y'dRDJsuUF%[:c at 9RTOgQ/vx7val2)o6=nJ5EJ56!\%E$$wjd4.3)u7#w&>'rQe-kdE`
-License: UNKNOWN
-
-Files: data/meshes/dolfin-1.xml.gz
-Copyright: xH2['aa'm\hPH@`$ASu`6 at XT![+cVq7A^20eQ3hm(O at sN7bpa7Pqfp
-License: UNKNOWN
-
+Copyright: ´¨
> qëEî`ê
ìIÔz•;’rç	ÔÚÓ;Ð;¡)ZômÔÚS<Ð{˜µ'y Ï61kGó -ý¢Uô hI‹¶ª
è@*µ#{´¤W´è
û–dêUø ¸‰(Óá*è^M¨c•>ÐwQkGû@ï"Rª
ñ½ç‰Z»ê:z!n½ÊèœÔiЋþF*OŠ@;Á—2‡¶* . aëE¡kÀû4!èUA›S‚^E‚–t
„`¶vdô¶'l½ˆ?ÕÀ•#l½¨?µ`3˜ ´'ÿ¬
+License: UNKNOWN
+ FIXME
+

Added: packages/fenics/dolfin/trunk/debian/patches/build.patch
URL: http://svn.debian.org/wsvn/debian-science/packages/fenics/dolfin/trunk/debian/patches/build.patch?rev=38512&op=file
==============================================================================
--- packages/fenics/dolfin/trunk/debian/patches/build.patch (added)
+++ packages/fenics/dolfin/trunk/debian/patches/build.patch Wed May 18 15:26:45 2011
@@ -1,0 +1,13 @@
+Fix FTBFS when Trilinos is enabled.
+
+diff -Nru dolfin-0.9.11.orig/dolfin/la/EpetraLUSolver.cpp dolfin-0.9.11/dolfin/la/EpetraLUSolver.cpp
+--- dolfin-0.9.11.orig/dolfin/la/EpetraLUSolver.cpp	2011-05-16 17:57:28.000000000 +0200
++++ dolfin-0.9.11/dolfin/la/EpetraLUSolver.cpp	2011-05-18 15:04:50.000000000 +0200
+@@ -21,6 +21,7 @@
+ 
+ #ifdef HAS_TRILINOS
+ 
++#include <cstddef>
+ #include <Amesos.h>
+ #include <Amesos_BaseSolver.h>
+ #include <Amesos_ConfigDefs.h>

Added: packages/fenics/dolfin/trunk/debian/patches/series
URL: http://svn.debian.org/wsvn/debian-science/packages/fenics/dolfin/trunk/debian/patches/series?rev=38512&op=file
==============================================================================
--- packages/fenics/dolfin/trunk/debian/patches/series (added)
+++ packages/fenics/dolfin/trunk/debian/patches/series Wed May 18 15:26:45 2011
@@ -1,0 +1,1 @@
+build.patch

Modified: packages/fenics/dolfin/trunk/debian/rules
URL: http://svn.debian.org/wsvn/debian-science/packages/fenics/dolfin/trunk/debian/rules?rev=38512&op=diff
==============================================================================
--- packages/fenics/dolfin/trunk/debian/rules (original)
+++ packages/fenics/dolfin/trunk/debian/rules Wed May 18 15:26:45 2011
@@ -1,19 +1,29 @@
 #!/usr/bin/make -f
 
-ifneq (,$(DEB_MAINTAINER_MODE))
-  # Enable stuff not policy compliant (eg. unsuitable for build daemons)
-  DEB_COPYRIGHT_CHECK_STRICT = yes
-endif
-
-include debian/cdbs/1/rules/copyright-check.mk
 include /usr/share/cdbs/1/rules/debhelper.mk
 include /usr/share/cdbs/1/class/cmake.mk
+include /usr/share/cdbs/1/rules/utils.mk
+
+DEB_COMPRESS_EXCLUDE_ALL := .py .cpp .h .pdf
+DEB_INSTALL_DOCS_ALL += AUTHORS README TODO
 
 # Allow test programs that uses OpenMPI to run
 export OMPI_MCA_plm_rsh_agent=/bin/false
 
-DEB_COMPRESS_EXCLUDE := .py .cpp .h .pdf
-DEB_INSTALL_DOCS_ALL += AUTHORS README TODO
+# Disable MPI on lam architectures
+ifeq ($(DEB_BUILD_ARCH), armel)
+ENABLE_MPI=OFF
+else ifeq ($(DEB_BUILD_ARCH), mips)
+ENABLE_MPI=OFF
+else ifeq ($(DEB_BUILD_ARCH), mipsel)
+ENABLE_MPI=OFF
+else ifeq ($(DEB_BUILD_ARCH), s390)
+ENABLE_MPI=OFF
+else ifeq ($(DEB_BUILD_ARCH), sparc)
+ENABLE_MPI=OFF
+else
+ENABLE_MPI=ON
+endif
 
 DEB_CMAKE_EXTRA_FLAGS= \
 	-D BUILD_SHARED_LIBS:BOOL=ON \
@@ -25,7 +35,8 @@
 	-D DOLFIN_ENABLE_MTL4:BOOL=OFF \
 	-D DOLFIN_ENABLE_PARMETIS:BOOL=OFF \
 	-D DOLFIN_ENABLE_UNIT_TESTS:BOOL=OFF \
-	-D SWIG_EXECUTABLE:FILEPATH=/usr/bin/swig \
+	-D SWIG_EXECUTABLE:FILEPATH=/usr/bin/swig2.0 \
+        -D DOLFIN_ENABLE_MPI:BOOL=$(ENABLE_MPI) \
 	..
 
 USCAN_DESTDIR := $(CURDIR)




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