[SCM] The Molecular Modelling Toolkit packaging branch, master, updated. 41cb1cae0ed0645885e97e86ae5399725d014bd6

[Picca Frédéric-Emma?==?UTF-8?Q?nuel]

The following commit has been merged in the master branch:
commit 41cb1cae0ed0645885e97e86ae5399725d014bd6
Author: Picca Frédéric-Emmanuel <picca at debian.org>
Date:   Sun Sep 18 16:59:10 2011 +0200

    update the todo list

diff --git a/debian/todo b/debian/todo
index 477137c..1af50c7 100644
--- a/debian/todo
+++ b/debian/todo
@@ -1,5 +1,86 @@
-licences de dpmta ??? faut-il faire un paquer pour cette librairie sachant qu'il ne semble plus tellement maintenu ???
- 
+licences de dpmta ??? faut-il faire un paquer pour cette librairie
+sachant qu'il ne semble plus tellement maintenu ???
+
+
+
+visiblement lorsque je teste l'installation avec test_pi.py
+
+picca at mordor:~/Debian/mmtk/mmtk/test$ python test_pi.py 
+Traceback (most recent call last):
+  File "test_pi.py", line 4, in <module>
+    from MMTK_PINormalModeIntegrator import PINormalModeIntegrator, PILangevinNormalModeIntegrator
+ImportError: No module named MMTK_PINormalModeIntegrator
+
+Effectivementil n'y a aucune trace de ce module
+MMTK_PINormalModeIntegrator dans le paquet ???  ni dans le setup.py.
+
+si je regarde dans le directory Test il y a d'autres tests qui eux fonctionnent.
+avec neanmoins deux failures dur une architecture i386 pentium.
+
+test_energy (pickle_tests.WaterTest) ... ok
+test_parent (pickle_tests.WaterTest) ... ok
+test_type (pickle_tests.WaterTest) ... ok
+test_dihedral (energy_tests.DihedralTest) ... ok
+test_nonbondedList (energy_tests.InfiniteUniverseNonbondedListTest) ... ok
+test_nonbondedList (energy_tests.OrthorhombicUniverseNonbondedListTest) ... ok
+test_nonbondedList (energy_tests.ParallelepipedicUniverseNonbondedListTest) ... ok
+test_singleSubset (energy_tests.LennardJonesSubsetTest) ... ok
+test_twoSubsets (energy_tests.LennardJonesSubsetTest) ... ok
+test_energeticModes (normal_mode_tests.WaterTest) ... ok
+test_vibrationalModes (normal_mode_tests.WaterTest) ... ok
+test_subspaceModes (normal_mode_tests.PeptideTest) ... ok
+test_subspaceModesWithExclusion (normal_mode_tests.PeptideTest) ... ok
+test_subspaceModesWithNumericalDifferentiation (normal_mode_tests.PeptideTest) ... ok
+test_lrb (subspace_tests.RigidBodyTest) ... ok
+test_projections (subspace_tests.RigidBodyTest) ... ok
+test_pdProjections (subspace_tests.PeptideNormalModeTest) ... ok
+test_rmProjections (subspace_tests.PeptideNormalModeTest) ... ok
+test_snapshot (trajectory_tests.InfiniteUniverseTestSP) ... ok
+test_snapshot (trajectory_tests.InfiniteUniverseTestDP) ... ok
+test_snapshot (trajectory_tests.OrthorhombicUniverseTestSP) ... ok
+test_snapshot (trajectory_tests.OrthorhombicUniverseTestDP) ... ok
+test_snapshot (trajectory_tests.ParallelepipedicUniverseTestSP) ... ok
+test_snapshot (trajectory_tests.ParallelepipedicUniverseTestDP) ... ok
+test_singleSubset (enm_tests.CalphaFFSubsetTest) ... ok
+test_twoSubsets (enm_tests.CalphaFFSubsetTest) ... FAIL
+test_singleSubset (enm_tests.DeformationFFSubsetTest) ... ok
+test_twoSubsets (enm_tests.DeformationFFSubsetTest) ... FAIL
+test_singleSubset (enm_tests.ANMFFSubsetTest) ... ok
+test_twoSubsets (enm_tests.ANMFFSubsetTest) ... ok
+test_changeangle (internal_coordinate_tests.ICTest) ... ok
+test_changebond (internal_coordinate_tests.ICTest) ... ok
+test_changephi (internal_coordinate_tests.ICTest) ... ok
+test_cyclic (internal_coordinate_tests.ICTest) ... ok
+test_phipsi (internal_coordinate_tests.ICTest) ... ok
+
+======================================================================
+FAIL: test_twoSubsets (enm_tests.CalphaFFSubsetTest)
+----------------------------------------------------------------------
+Traceback (most recent call last):
+  File "/home/picca/Debian/mmtk/mmtk/Tests/subsets.py", line 27, in test_twoSubsets
+    self.assert_((N.fabs(fc[a1,a2].array) < 1.e-14).all())
+AssertionError
+
+======================================================================
+FAIL: test_twoSubsets (enm_tests.DeformationFFSubsetTest)
+----------------------------------------------------------------------
+Traceback (most recent call last):
+  File "/home/picca/Debian/mmtk/mmtk/Tests/subsets.py", line 27, in test_twoSubsets
+    self.assert_((N.fabs(fc[a1,a2].array) < 1.e-14).all())
+AssertionError
+
+----------------------------------------------------------------------
+Ran 51 tests in 114.494s
+
+FAILED (failures=2)
+
+que faut-il faire avec tout cela ?
+
+Il faudrait intégrer les test lors du build de fançon à avoir les
+tests sur les differentes architectures.
+
+
+
 lintian (outil qualité de Debian)
 
 W: python-mmtk: extended-description-line-too-long

-- 
The Molecular Modelling Toolkit packaging