r46854 - in /packages/R/r-cran-msm/trunk/debian: changelog control tests/control tests/run-unit-test

[tille at users.alioth.debian.org]

Author: tille
Date: Tue Aug 12 11:10:49 2014
New Revision: 46854

URL: http://svn.debian.org/wsvn/debian-science/?sc=1&rev=46854
Log:
Adapt autopkgtest script, Add r-cran-numderiv to Recommends and test Depends

Modified:
    packages/R/r-cran-msm/trunk/debian/changelog
    packages/R/r-cran-msm/trunk/debian/control
    packages/R/r-cran-msm/trunk/debian/tests/control
    packages/R/r-cran-msm/trunk/debian/tests/run-unit-test

Modified: packages/R/r-cran-msm/trunk/debian/changelog
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-msm/trunk/debian/changelog?rev=46854&op=diff
==============================================================================
--- packages/R/r-cran-msm/trunk/debian/changelog	(original)
+++ packages/R/r-cran-msm/trunk/debian/changelog	Tue Aug 12 11:10:49 2014
@@ -1,7 +1,8 @@
-r-cran-msm (1.4-1) UNRELEASED; urgency=medium
+r-cran-msm (1.4-1) unstable; urgency=medium
 
   * New upstream version
-  TODO: currently unit test did not passed fully, wait for upstream response
+  * Adapt autopkgtest script
+  * Add r-cran-numderiv to Recommends and test Depends
 
  -- Andreas Tille <tille at debian.org>  Fri, 08 Aug 2014 18:15:23 +0200
 

Modified: packages/R/r-cran-msm/trunk/debian/control
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-msm/trunk/debian/control?rev=46854&op=diff
==============================================================================
--- packages/R/r-cran-msm/trunk/debian/control	(original)
+++ packages/R/r-cran-msm/trunk/debian/control	Tue Aug 12 11:10:49 2014
@@ -22,6 +22,7 @@
          r-cran-expm,
          r-cran-mvtnorm,
          r-cran-survival
+Recommends: r-cran-numderiv
 Description: GNU R Multi-state Markov and hidden Markov models in continuous time
  Functions for fitting general continuous-time Markov and hidden Markov
  multi-state models to longitudinal data. Both Markov transition rates and the

Modified: packages/R/r-cran-msm/trunk/debian/tests/control
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-msm/trunk/debian/tests/control?rev=46854&op=diff
==============================================================================
--- packages/R/r-cran-msm/trunk/debian/tests/control	(original)
+++ packages/R/r-cran-msm/trunk/debian/tests/control	Tue Aug 12 11:10:49 2014
@@ -1,3 +1,3 @@
 Tests: run-unit-test
-Depends: @, @builddeps@, r-cran-runit
+Depends: @, @builddeps@, r-cran-runit, r-cran-numderiv
 Restrictions: allow-stderr

Modified: packages/R/r-cran-msm/trunk/debian/tests/run-unit-test
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-msm/trunk/debian/tests/run-unit-test?rev=46854&op=diff
==============================================================================
--- packages/R/r-cran-msm/trunk/debian/tests/run-unit-test	(original)
+++ packages/R/r-cran-msm/trunk/debian/tests/run-unit-test	Tue Aug 12 11:10:49 2014
@@ -7,5 +7,5 @@
 cp -a /usr/share/doc/r-cran-msm/tests/* $ADTTMP
 find . -name "*.gz" -exec gunzip \{\} \;
 for testx in `ls *.R` ; do
-    R --no-save < $testx
+    LC_ALL=C.UTF-8 R --no-save < $testx
 done