[lmfit-py] 03/08: Merge tag 'upstream/0.8.0_rc2+dfsg.1'

Frédéric-Emmanuel Picca picca at moszumanska.debian.org
Sun Aug 31 12:33:34 UTC 2014


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picca pushed a commit to branch master
in repository lmfit-py.

commit bd3a54c15fa5d130ec79d3038739fa2a502bdaef
Merge: 05314c4 ea36651
Author: Picca Frédéric-Emmanuel <picca at debian.org>
Date:   Sun Aug 31 10:37:04 2014 +0200

    Merge tag 'upstream/0.8.0_rc2+dfsg.1'
    
    Upstream version 0.8.0~rc2+dfsg.1

 .travis.yml                                        |  58 +-
 THANKS.txt                                         |  12 +-
 doc/Makefile                                       |  22 +-
 doc/_images/conf_interval1.png                     | Bin 0 -> 21741 bytes
 doc/_images/conf_interval1a.png                    | Bin 0 -> 19853 bytes
 doc/_images/conf_interval2.png                     | Bin 0 -> 16793 bytes
 doc/_images/model_eval.png                         | Bin 0 -> 21967 bytes
 doc/_images/model_fit1.png                         | Bin 0 -> 29579 bytes
 doc/_images/model_fit2.png                         | Bin 0 -> 33474 bytes
 doc/_images/models_doc1.png                        | Bin 0 -> 32292 bytes
 doc/_images/models_doc2.png                        | Bin 0 -> 33112 bytes
 doc/_images/models_nistgauss.png                   | Bin 0 -> 44692 bytes
 doc/_images/models_nistgauss2.png                  | Bin 0 -> 45887 bytes
 doc/_images/models_peak1.png                       | Bin 0 -> 161561 bytes
 doc/_images/models_peak2.png                       | Bin 0 -> 175732 bytes
 doc/_images/models_peak3.png                       | Bin 0 -> 159332 bytes
 doc/_images/models_peak4.png                       | Bin 0 -> 164721 bytes
 doc/_images/models_stepfit.png                     | Bin 0 -> 31966 bytes
 doc/_templates/indexsidebar.html                   |  21 +-
 doc/_templates/layout.html                         |  58 ++
 doc/bounds.rst                                     |  16 +-
 doc/builtin_models.rst                             | 782 +++++++++++++++++
 doc/conf.py                                        |  80 +-
 doc/confidence.rst                                 | 169 ++--
 doc/constraints.rst                                |   6 +-
 doc/contents.rst                                   |  15 +
 doc/fitting.rst                                    |  71 +-
 doc/index.rst                                      | 102 ++-
 doc/installation.rst                               |  75 +-
 doc/intro.rst                                      | 150 ++++
 doc/model.rst                                      | 572 ++++++++++++
 doc/models1d.rst                                   |  80 --
 doc/models1d_doc1.png                              | Bin 29771 -> 0 bytes
 doc/parameters.rst                                 | 160 +---
 doc/{ => sphinx/mathjax}/conf.py                   |  80 +-
 doc/{ => sphinx/pngmath}/conf.py                   |  78 +-
 doc/sphinx/theme/lmfitdoc/layout.html              |  14 +
 doc/sphinx/theme/lmfitdoc/static/contents.png      | Bin 0 -> 202 bytes
 doc/sphinx/theme/lmfitdoc/static/lmfitdoc.css_t    | 348 ++++++++
 doc/sphinx/theme/lmfitdoc/static/navigation.png    | Bin 0 -> 218 bytes
 doc/sphinx/theme/lmfitdoc/theme.conf               |   4 +
 examples/{NIST_STRD/Gauss2.dat => NIST_Gauss2.dat} | 120 +--
 examples/{simple.py => doc_basic.py}               |   4 +-
 examples/doc_model1.py                             |  25 +
 examples/doc_model2.py                             |  29 +
 examples/doc_nistgauss.py                          |  36 +
 examples/doc_nistgauss2.py                         |  40 +
 examples/doc_stepmodel.py                          |  28 +
 examples/example_anneal.py                         |  63 --
 examples/example_covar.py                          |   8 +-
 examples/example_peakmodel.py                      |   2 +-
 examples/example_stepmodel.py                      |  28 -
 examples/fit_pvoigt.py                             |  10 +-
 examples/fit_pvoigt2.py                            |  18 +-
 examples/fit_pvoigt_NelderMead.py                  |  11 +-
 examples/fit_pvoigt_NelderMead2.py                 |  10 +-
 examples/fit_with_algebraic_constraint.py          |  16 +-
 examples/m1.py                                     |   2 +-
 examples/model1d_doc1.py                           |   2 +-
 examples/model1d_doc2.py                           |   2 +-
 examples/models_doc1.py                            |  47 +
 examples/models_doc2.py                            |  30 +
 examples/peakfit_1.py                              |   6 +-
 examples/{fit_NIST.py => test_NIST_Strd.py}        |  22 +-
 examples/test_peak.dat                             | 404 +++++++++
 examples/use_models1d.py                           |   4 +-
 lmfit/__init__.py                                  |  11 +-
 lmfit/asteval.py                                   | 159 ++--
 lmfit/astutils.py                                  | 123 +--
 lmfit/confidence.py                                |  27 +-
 lmfit/lineshapes.py                                | 243 ++++++
 lmfit/minimizer.py                                 |  69 +-
 lmfit/model.py                                     | 365 +++++---
 lmfit/models.py                                    | 334 +++++++
 lmfit/{models1d.py => old_models1d.py}             |   0
 lmfit/parameter.py                                 |   8 +-
 lmfit/printfuncs.py                                |  60 +-
 lmfit/specified_models.py                          | 196 -----
 lmfit/uncertainties/test_umath.py                  | 294 -------
 lmfit/uncertainties/test_uncertainties.py          | 972 ---------------------
 lmfit/uncertainties/umath.py                       |  22 +-
 lmfit/uncertainties/unumpy/__init__.py             |  82 --
 lmfit/uncertainties/unumpy/core.py                 | 612 -------------
 lmfit/uncertainties/unumpy/test_ulinalg.py         |  87 --
 lmfit/uncertainties/unumpy/test_unumpy.py          | 265 ------
 lmfit/uncertainties/unumpy/ulinalg.py              |  17 -
 lmfit/utilfuncs.py                                 |  86 --
 requirements.txt                                   |   3 +
 setup.py                                           |   2 +-
 {examples => tests}/NISTModels.py                  |   6 +-
 {examples => tests}/NIST_STRD/Bennett5.dat         |   0
 {examples => tests}/NIST_STRD/BoxBOD.dat           |   0
 {examples => tests}/NIST_STRD/Chwirut1.dat         |   0
 {examples => tests}/NIST_STRD/Chwirut2.dat         |   0
 {examples => tests}/NIST_STRD/DanWood.dat          |   0
 {examples => tests}/NIST_STRD/ENSO.dat             |   0
 {examples => tests}/NIST_STRD/Eckerle4.dat         |   0
 {examples => tests}/NIST_STRD/Gauss1.dat           |   0
 {examples => tests}/NIST_STRD/Gauss2.dat           |   0
 {examples => tests}/NIST_STRD/Gauss3.dat           |   0
 {examples => tests}/NIST_STRD/Hahn1.dat            |   0
 {examples => tests}/NIST_STRD/Kirby2.dat           |   0
 {examples => tests}/NIST_STRD/Lanczos1.dat         |   0
 {examples => tests}/NIST_STRD/Lanczos2.dat         |   0
 {examples => tests}/NIST_STRD/Lanczos3.dat         |   0
 {examples => tests}/NIST_STRD/MGH09.dat            |   0
 {examples => tests}/NIST_STRD/MGH10.dat            |   0
 {examples => tests}/NIST_STRD/MGH17.dat            |   0
 {examples => tests}/NIST_STRD/Misra1a.dat          |   0
 {examples => tests}/NIST_STRD/Misra1b.dat          |   0
 {examples => tests}/NIST_STRD/Misra1c.dat          |   0
 {examples => tests}/NIST_STRD/Misra1d.dat          |   0
 {examples => tests}/NIST_STRD/Models               |   0
 {examples => tests}/NIST_STRD/Nelson.dat           |   0
 {examples => tests}/NIST_STRD/Rat42.dat            |   0
 {examples => tests}/NIST_STRD/Rat43.dat            |   0
 {examples => tests}/NIST_STRD/Roszman1.dat         |   0
 {examples => tests}/NIST_STRD/Thurber.dat          |   0
 tests/lmfit_testutils.py                           |  18 +
 tests/test_1variable.py                            |  46 +-
 tests/test_NIST_Strd.py                            | 268 ++++++
 tests/test_algebraic_constraint.py                 |  12 +-
 tests/test_algebraic_constraint2.py                |  24 +-
 tests/test_basicfit.py                             |  45 +
 tests/test_bounds.py                               |  54 ++
 tests/test_model.py                                | 130 ++-
 tests/test_multidatasets.py                        |  76 ++
 tests/test_nose.py                                 |  14 +-
 tests/test_stepmodel.py                            |  59 ++
 129 files changed, 4803 insertions(+), 3926 deletions(-)

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