[libccp4] 01/05: Imported Upstream version 6.4.6
Frédéric-Emmanuel Picca
picca at moszumanska.debian.org
Wed Dec 31 10:12:21 UTC 2014
This is an automated email from the git hooks/post-receive script.
picca pushed a commit to branch master
in repository libccp4.
commit a3e6eba53ec9235ed5a604c23e409e2de8dd55d3
Author: Picca Frédéric-Emmanuel <picca at debian.org>
Date: Wed Dec 31 08:05:56 2014 +0100
Imported Upstream version 6.4.6
---
Makefile.am | 2 +-
Makefile.in | 2 +-
build-aux/config.guess | 151 ++++++++++++++++++++++++++++---------------------
build-aux/config.sub | 30 +++++-----
ccp4-config.cmake | 8 +--
configure | 72 +++++++++--------------
configure.ac | 8 +--
m4/libtool.m4 | 18 ++----
8 files changed, 142 insertions(+), 149 deletions(-)
diff --git a/Makefile.am b/Makefile.am
index 634f8c2..8703c52 100644
--- a/Makefile.am
+++ b/Makefile.am
@@ -51,7 +51,7 @@ fortran/dna_header.fh
nodist_fortran_libccp4f_la_SOURCES = fortran/unix.f
fortran_libccp4f_la_CPPFLAGS = -I$(srcdir)/ccp4
-fortran_libccp4f_la_LIBADD = ccp4/libccp4c.la -lmmdb
+fortran_libccp4f_la_LIBADD = ccp4/libccp4c.la -lmmdb2
BUILT_SOURCES = fortran/unix.f
CLEANFILES = fortran/unix.f
diff --git a/Makefile.in b/Makefile.in
index d3ae8d8..c84cac7 100644
--- a/Makefile.in
+++ b/Makefile.in
@@ -453,7 +453,7 @@ fortran/dna_header.fh
nodist_fortran_libccp4f_la_SOURCES = fortran/unix.f
fortran_libccp4f_la_CPPFLAGS = -I$(srcdir)/ccp4
-fortran_libccp4f_la_LIBADD = ccp4/libccp4c.la -lmmdb
+fortran_libccp4f_la_LIBADD = ccp4/libccp4c.la -lmmdb2
BUILT_SOURCES = fortran/unix.f
CLEANFILES = fortran/unix.f
ccp4_libccp4c_la_LDFLAGS = -no-undefined
diff --git a/build-aux/config.guess b/build-aux/config.guess
index 1804e9f..b79252d 100755
--- a/build-aux/config.guess
+++ b/build-aux/config.guess
@@ -1,10 +1,8 @@
#! /bin/sh
# Attempt to guess a canonical system name.
-# Copyright (C) 1992, 1993, 1994, 1995, 1996, 1997, 1998, 1999,
-# 2000, 2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010,
-# 2011, 2012, 2013 Free Software Foundation, Inc.
+# Copyright 1992-2013 Free Software Foundation, Inc.
-timestamp='2012-12-29'
+timestamp='2013-06-10'
# This file is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by
@@ -26,7 +24,7 @@ timestamp='2012-12-29'
# program. This Exception is an additional permission under section 7
# of the GNU General Public License, version 3 ("GPLv3").
#
-# Originally written by Per Bothner.
+# Originally written by Per Bothner.
#
# You can get the latest version of this script from:
# http://git.savannah.gnu.org/gitweb/?p=config.git;a=blob_plain;f=config.guess;hb=HEAD
@@ -52,9 +50,7 @@ version="\
GNU config.guess ($timestamp)
Originally written by Per Bothner.
-Copyright (C) 1992, 1993, 1994, 1995, 1996, 1997, 1998, 1999, 2000,
-2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011,
-2012, 2013 Free Software Foundation, Inc.
+Copyright 1992-2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE."
@@ -136,6 +132,27 @@ UNAME_RELEASE=`(uname -r) 2>/dev/null` || UNAME_RELEASE=unknown
UNAME_SYSTEM=`(uname -s) 2>/dev/null` || UNAME_SYSTEM=unknown
UNAME_VERSION=`(uname -v) 2>/dev/null` || UNAME_VERSION=unknown
+case "${UNAME_SYSTEM}" in
+Linux|GNU|GNU/*)
+ # If the system lacks a compiler, then just pick glibc.
+ # We could probably try harder.
+ LIBC=gnu
+
+ eval $set_cc_for_build
+ cat <<-EOF > $dummy.c
+ #include <features.h>
+ #if defined(__UCLIBC__)
+ LIBC=uclibc
+ #elif defined(__dietlibc__)
+ LIBC=dietlibc
+ #else
+ LIBC=gnu
+ #endif
+ EOF
+ eval `$CC_FOR_BUILD -E $dummy.c 2>/dev/null | grep '^LIBC'`
+ ;;
+esac
+
# Note: order is significant - the case branches are not exclusive.
case "${UNAME_MACHINE}:${UNAME_SYSTEM}:${UNAME_RELEASE}:${UNAME_VERSION}" in
@@ -857,21 +874,21 @@ EOF
exit ;;
*:GNU:*:*)
# the GNU system
- echo `echo ${UNAME_MACHINE}|sed -e 's,[-/].*$,,'`-unknown-gnu`echo ${UNAME_RELEASE}|sed -e 's,/.*$,,'`
+ echo `echo ${UNAME_MACHINE}|sed -e 's,[-/].*$,,'`-unknown-${LIBC}`echo ${UNAME_RELEASE}|sed -e 's,/.*$,,'`
exit ;;
*:GNU/*:*:*)
# other systems with GNU libc and userland
- echo ${UNAME_MACHINE}-unknown-`echo ${UNAME_SYSTEM} | sed 's,^[^/]*/,,' | tr '[A-Z]' '[a-z]'``echo ${UNAME_RELEASE}|sed -e 's/[-(].*//'`-gnu
+ echo ${UNAME_MACHINE}-unknown-`echo ${UNAME_SYSTEM} | sed 's,^[^/]*/,,' | tr '[A-Z]' '[a-z]'``echo ${UNAME_RELEASE}|sed -e 's/[-(].*//'`-${LIBC}
exit ;;
i*86:Minix:*:*)
echo ${UNAME_MACHINE}-pc-minix
exit ;;
aarch64:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
aarch64_be:Linux:*:*)
UNAME_MACHINE=aarch64_be
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
alpha:Linux:*:*)
case `sed -n '/^cpu model/s/^.*: \(.*\)/\1/p' < /proc/cpuinfo` in
@@ -884,59 +901,54 @@ EOF
EV68*) UNAME_MACHINE=alphaev68 ;;
esac
objdump --private-headers /bin/sh | grep -q ld.so.1
- if test "$?" = 0 ; then LIBC="libc1" ; else LIBC="" ; fi
- echo ${UNAME_MACHINE}-unknown-linux-gnu${LIBC}
+ if test "$?" = 0 ; then LIBC="gnulibc1" ; fi
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
+ exit ;;
+ arc:Linux:*:* | arceb:Linux:*:*)
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
arm*:Linux:*:*)
eval $set_cc_for_build
if echo __ARM_EABI__ | $CC_FOR_BUILD -E - 2>/dev/null \
| grep -q __ARM_EABI__
then
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
else
if echo __ARM_PCS_VFP | $CC_FOR_BUILD -E - 2>/dev/null \
| grep -q __ARM_PCS_VFP
then
- echo ${UNAME_MACHINE}-unknown-linux-gnueabi
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}eabi
else
- echo ${UNAME_MACHINE}-unknown-linux-gnueabihf
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}eabihf
fi
fi
exit ;;
avr32*:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
cris:Linux:*:*)
- echo ${UNAME_MACHINE}-axis-linux-gnu
+ echo ${UNAME_MACHINE}-axis-linux-${LIBC}
exit ;;
crisv32:Linux:*:*)
- echo ${UNAME_MACHINE}-axis-linux-gnu
+ echo ${UNAME_MACHINE}-axis-linux-${LIBC}
exit ;;
frv:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
hexagon:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
i*86:Linux:*:*)
- LIBC=gnu
- eval $set_cc_for_build
- sed 's/^ //' << EOF >$dummy.c
- #ifdef __dietlibc__
- LIBC=dietlibc
- #endif
-EOF
- eval `$CC_FOR_BUILD -E $dummy.c 2>/dev/null | grep '^LIBC'`
- echo "${UNAME_MACHINE}-pc-linux-${LIBC}"
+ echo ${UNAME_MACHINE}-pc-linux-${LIBC}
exit ;;
ia64:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
m32r*:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
m68*:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
mips:Linux:*:* | mips64:Linux:*:*)
eval $set_cc_for_build
@@ -955,54 +967,63 @@ EOF
#endif
EOF
eval `$CC_FOR_BUILD -E $dummy.c 2>/dev/null | grep '^CPU'`
- test x"${CPU}" != x && { echo "${CPU}-unknown-linux-gnu"; exit; }
+ test x"${CPU}" != x && { echo "${CPU}-unknown-linux-${LIBC}"; exit; }
;;
+ or1k:Linux:*:*)
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
+ exit ;;
or32:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
padre:Linux:*:*)
- echo sparc-unknown-linux-gnu
+ echo sparc-unknown-linux-${LIBC}
exit ;;
parisc64:Linux:*:* | hppa64:Linux:*:*)
- echo hppa64-unknown-linux-gnu
+ echo hppa64-unknown-linux-${LIBC}
exit ;;
parisc:Linux:*:* | hppa:Linux:*:*)
# Look for CPU level
case `grep '^cpu[^a-z]*:' /proc/cpuinfo 2>/dev/null | cut -d' ' -f2` in
- PA7*) echo hppa1.1-unknown-linux-gnu ;;
- PA8*) echo hppa2.0-unknown-linux-gnu ;;
- *) echo hppa-unknown-linux-gnu ;;
+ PA7*) echo hppa1.1-unknown-linux-${LIBC} ;;
+ PA8*) echo hppa2.0-unknown-linux-${LIBC} ;;
+ *) echo hppa-unknown-linux-${LIBC} ;;
esac
exit ;;
ppc64:Linux:*:*)
- echo powerpc64-unknown-linux-gnu
+ echo powerpc64-unknown-linux-${LIBC}
exit ;;
ppc:Linux:*:*)
- echo powerpc-unknown-linux-gnu
+ echo powerpc-unknown-linux-${LIBC}
+ exit ;;
+ ppc64le:Linux:*:*)
+ echo powerpc64le-unknown-linux-${LIBC}
+ exit ;;
+ ppcle:Linux:*:*)
+ echo powerpcle-unknown-linux-${LIBC}
exit ;;
s390:Linux:*:* | s390x:Linux:*:*)
- echo ${UNAME_MACHINE}-ibm-linux
+ echo ${UNAME_MACHINE}-ibm-linux-${LIBC}
exit ;;
sh64*:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
sh*:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
sparc:Linux:*:* | sparc64:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
tile*:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
vax:Linux:*:*)
- echo ${UNAME_MACHINE}-dec-linux-gnu
+ echo ${UNAME_MACHINE}-dec-linux-${LIBC}
exit ;;
x86_64:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
xtensa*:Linux:*:*)
- echo ${UNAME_MACHINE}-unknown-linux-gnu
+ echo ${UNAME_MACHINE}-unknown-linux-${LIBC}
exit ;;
i*86:DYNIX/ptx:4*:*)
# ptx 4.0 does uname -s correctly, with DYNIX/ptx in there.
@@ -1235,19 +1256,21 @@ EOF
exit ;;
*:Darwin:*:*)
UNAME_PROCESSOR=`uname -p` || UNAME_PROCESSOR=unknown
- case $UNAME_PROCESSOR in
- i386)
- eval $set_cc_for_build
- if [ "$CC_FOR_BUILD" != 'no_compiler_found' ]; then
- if (echo '#ifdef __LP64__'; echo IS_64BIT_ARCH; echo '#endif') | \
- (CCOPTS= $CC_FOR_BUILD -E - 2>/dev/null) | \
- grep IS_64BIT_ARCH >/dev/null
- then
- UNAME_PROCESSOR="x86_64"
- fi
- fi ;;
- unknown) UNAME_PROCESSOR=powerpc ;;
- esac
+ eval $set_cc_for_build
+ if test "$UNAME_PROCESSOR" = unknown ; then
+ UNAME_PROCESSOR=powerpc
+ fi
+ if [ "$CC_FOR_BUILD" != 'no_compiler_found' ]; then
+ if (echo '#ifdef __LP64__'; echo IS_64BIT_ARCH; echo '#endif') | \
+ (CCOPTS= $CC_FOR_BUILD -E - 2>/dev/null) | \
+ grep IS_64BIT_ARCH >/dev/null
+ then
+ case $UNAME_PROCESSOR in
+ i386) UNAME_PROCESSOR=x86_64 ;;
+ powerpc) UNAME_PROCESSOR=powerpc64 ;;
+ esac
+ fi
+ fi
echo ${UNAME_PROCESSOR}-apple-darwin${UNAME_RELEASE}
exit ;;
*:procnto*:*:* | *:QNX:[0123456789]*:*)
diff --git a/build-aux/config.sub b/build-aux/config.sub
index 52f04bc..c765b34 100755
--- a/build-aux/config.sub
+++ b/build-aux/config.sub
@@ -1,10 +1,8 @@
#! /bin/sh
# Configuration validation subroutine script.
-# Copyright (C) 1992, 1993, 1994, 1995, 1996, 1997, 1998, 1999,
-# 2000, 2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010,
-# 2011, 2012, 2013 Free Software Foundation, Inc.
+# Copyright 1992-2013 Free Software Foundation, Inc.
-timestamp='2012-12-29'
+timestamp='2013-04-24'
# This file is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by
@@ -70,9 +68,7 @@ Report bugs and patches to <config-patches at gnu.org>."
version="\
GNU config.sub ($timestamp)
-Copyright (C) 1992, 1993, 1994, 1995, 1996, 1997, 1998, 1999, 2000,
-2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011,
-2012, 2013 Free Software Foundation, Inc.
+Copyright 1992-2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE."
@@ -256,7 +252,7 @@ case $basic_machine in
| alpha | alphaev[4-8] | alphaev56 | alphaev6[78] | alphapca5[67] \
| alpha64 | alpha64ev[4-8] | alpha64ev56 | alpha64ev6[78] | alpha64pca5[67] \
| am33_2.0 \
- | arc \
+ | arc | arceb \
| arm | arm[bl]e | arme[lb] | armv[2-8] | armv[3-8][lb] | armv7[arm] \
| avr | avr32 \
| be32 | be64 \
@@ -290,16 +286,17 @@ case $basic_machine in
| mipsisa64r2 | mipsisa64r2el \
| mipsisa64sb1 | mipsisa64sb1el \
| mipsisa64sr71k | mipsisa64sr71kel \
+ | mipsr5900 | mipsr5900el \
| mipstx39 | mipstx39el \
| mn10200 | mn10300 \
| moxie \
| mt \
| msp430 \
| nds32 | nds32le | nds32be \
- | nios | nios2 \
+ | nios | nios2 | nios2eb | nios2el \
| ns16k | ns32k \
| open8 \
- | or32 \
+ | or1k | or32 \
| pdp10 | pdp11 | pj | pjl \
| powerpc | powerpc64 | powerpc64le | powerpcle \
| pyramid \
@@ -369,7 +366,7 @@ case $basic_machine in
| aarch64-* | aarch64_be-* \
| alpha-* | alphaev[4-8]-* | alphaev56-* | alphaev6[78]-* \
| alpha64-* | alpha64ev[4-8]-* | alpha64ev56-* | alpha64ev6[78]-* \
- | alphapca5[67]-* | alpha64pca5[67]-* | arc-* \
+ | alphapca5[67]-* | alpha64pca5[67]-* | arc-* | arceb-* \
| arm-* | armbe-* | armle-* | armeb-* | armv*-* \
| avr-* | avr32-* \
| be32-* | be64-* \
@@ -407,12 +404,13 @@ case $basic_machine in
| mipsisa64r2-* | mipsisa64r2el-* \
| mipsisa64sb1-* | mipsisa64sb1el-* \
| mipsisa64sr71k-* | mipsisa64sr71kel-* \
+ | mipsr5900-* | mipsr5900el-* \
| mipstx39-* | mipstx39el-* \
| mmix-* \
| mt-* \
| msp430-* \
| nds32-* | nds32le-* | nds32be-* \
- | nios-* | nios2-* \
+ | nios-* | nios2-* | nios2eb-* | nios2el-* \
| none-* | np1-* | ns16k-* | ns32k-* \
| open8-* \
| orion-* \
@@ -1354,7 +1352,7 @@ case $os in
-gnu* | -bsd* | -mach* | -minix* | -genix* | -ultrix* | -irix* \
| -*vms* | -sco* | -esix* | -isc* | -aix* | -cnk* | -sunos | -sunos[34]*\
| -hpux* | -unos* | -osf* | -luna* | -dgux* | -auroraux* | -solaris* \
- | -sym* | -kopensolaris* \
+ | -sym* | -kopensolaris* | -plan9* \
| -amigaos* | -amigados* | -msdos* | -newsos* | -unicos* | -aof* \
| -aos* | -aros* \
| -nindy* | -vxsim* | -vxworks* | -ebmon* | -hms* | -mvs* \
@@ -1500,9 +1498,6 @@ case $os in
-aros*)
os=-aros
;;
- -kaos*)
- os=-kaos
- ;;
-zvmoe)
os=-zvmoe
;;
@@ -1594,6 +1589,9 @@ case $basic_machine in
mips*-*)
os=-elf
;;
+ or1k-*)
+ os=-elf
+ ;;
or32-*)
os=-coff
;;
diff --git a/ccp4-config.cmake b/ccp4-config.cmake
index 1aff2ab..25d1ae5 100644
--- a/ccp4-config.cmake
+++ b/ccp4-config.cmake
@@ -74,8 +74,6 @@ foreach(_component ${CCP4_FIND_COMPONENTS})
set(_header "ccif/ccif_defines.h")
elseif (${_upper} STREQUAL "SSM")
set(_header "ssm/ssm_vxedge.h")
- elseif (${_upper} STREQUAL "SSM-DEV")
- set(_header "ssm-dev/ssm_vxedge.h")
elseif (${_upper} STREQUAL "CCP4SRS")
set(_header "ccp4srs/ccp4srs_manager.h")
elseif (${_upper} STREQUAL "CLIPPER-CORE")
@@ -228,13 +226,13 @@ endforeach()
set(CCP4_LIBRARIES ${CCTBX_LIBRARY}
${CLIPPER-CCP4_LIBRARY}
+ ${CLIPPER-CIF_LIBRARY}
${CLIPPER-CONTRIB_LIBRARY}
${CLIPPER-MINIMOL_LIBRARY}
${CLIPPER-MMDB_LIBRARY}
${CLIPPER-CORE_LIBRARIES}
${CCP4SRS_LIBRARIES}
${SSM_LIBRARY}
- ${SSM-DEV_LIBRARY}
${CCIF_LIBRARIES}
${CCP4F_LIBRARY}
${CCP4C_LIBRARY}
@@ -260,8 +258,10 @@ elseif(DEFINED CMAKE_INSTALL_PREFIX)
endif()
mark_as_advanced(CCP4C_INCLUDE_DIR MMDB_INCLUDE_DIR MMDB2_INCLUDE_DIR
- CCIF_INCLUDE_DIR SSM_INCLUDE_DIR SSM-DEV_INCLUDE_DIR CCP4SRS_INCLUDE_DIR
+ CCIF_INCLUDE_DIR SSM_INCLUDE_DIR
+ CCP4SRS_INCLUDE_DIR
CLIPPER-CORE_INCLUDE_DIR CLIPPER-CCP4_INCLUDE_DIR
+ CLIPPER-CIF_INCLUDE_DIR
CLIPPER-CONTRIB_INCLUDE_DIR CLIPPER-MINIMOL_INCLUDE_DIR
CLIPPER-MMDB_INCLUDE_DIR FFTW2_INCLUDE_DIRS
CCTBX_INCLUDE_DIR CCP4_PY2_DIR)
diff --git a/configure b/configure
index 679678a..64bdc69 100755
--- a/configure
+++ b/configure
@@ -1,6 +1,6 @@
#! /bin/sh
# Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.69 for libccp4 6.4.5.
+# Generated by GNU Autoconf 2.69 for libccp4 6.4.6.
#
#
# Copyright (C) 1992-1996, 1998-2012 Free Software Foundation, Inc.
@@ -587,8 +587,8 @@ MAKEFLAGS=
# Identity of this package.
PACKAGE_NAME='libccp4'
PACKAGE_TARNAME='libccp4'
-PACKAGE_VERSION='6.4.5'
-PACKAGE_STRING='libccp4 6.4.5'
+PACKAGE_VERSION='6.4.6'
+PACKAGE_STRING='libccp4 6.4.6'
PACKAGE_BUGREPORT=''
PACKAGE_URL=''
@@ -1335,7 +1335,7 @@ if test "$ac_init_help" = "long"; then
# Omit some internal or obsolete options to make the list less imposing.
# This message is too long to be a string in the A/UX 3.1 sh.
cat <<_ACEOF
-\`configure' configures libccp4 6.4.5 to adapt to many kinds of systems.
+\`configure' configures libccp4 6.4.6 to adapt to many kinds of systems.
Usage: $0 [OPTION]... [VAR=VALUE]...
@@ -1405,7 +1405,7 @@ fi
if test -n "$ac_init_help"; then
case $ac_init_help in
- short | recursive ) echo "Configuration of libccp4 6.4.5:";;
+ short | recursive ) echo "Configuration of libccp4 6.4.6:";;
esac
cat <<\_ACEOF
@@ -1519,7 +1519,7 @@ fi
test -n "$ac_init_help" && exit $ac_status
if $ac_init_version; then
cat <<\_ACEOF
-libccp4 configure 6.4.5
+libccp4 configure 6.4.6
generated by GNU Autoconf 2.69
Copyright (C) 2012 Free Software Foundation, Inc.
@@ -2002,7 +2002,7 @@ cat >config.log <<_ACEOF
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
-It was created by libccp4 $as_me 6.4.5, which was
+It was created by libccp4 $as_me 6.4.6, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ $0 $@
@@ -2870,7 +2870,7 @@ fi
# Define the identity of the package.
PACKAGE='libccp4'
- VERSION='6.4.5'
+ VERSION='6.4.6'
cat >>confdefs.h <<_ACEOF
@@ -6465,7 +6465,7 @@ ia64-*-hpux*)
rm -rf conftest*
;;
-x86_64-*kfreebsd*-gnu|x86_64-*linux*|powerpc*-*linux*| \
+x86_64-*kfreebsd*-gnu|x86_64-*linux*|ppc*-*linux*|powerpc*-*linux*| \
s390*-*linux*|s390*-*tpf*|sparc*-*linux*)
# Find out which ABI we are using.
echo 'int i;' > conftest.$ac_ext
@@ -6483,10 +6483,7 @@ s390*-*linux*|s390*-*tpf*|sparc*-*linux*)
x86_64-*linux*)
LD="${LD-ld} -m elf_i386"
;;
- powerpc64le-*linux*)
- LD="${LD-ld} -m elf32lppclinux"
- ;;
- powerpc64-*linux*)
+ ppc64-*linux*|powerpc64-*linux*)
LD="${LD-ld} -m elf32ppclinux"
;;
s390x-*linux*)
@@ -6505,10 +6502,7 @@ s390*-*linux*|s390*-*tpf*|sparc*-*linux*)
x86_64-*linux*)
LD="${LD-ld} -m elf_x86_64"
;;
- powerpcle-*linux*)
- LD="${LD-ld} -m elf64lppc"
- ;;
- powerpc-*linux*)
+ ppc*-*linux*|powerpc*-*linux*)
LD="${LD-ld} -m elf64ppc"
;;
s390*-*linux*|s390*-*tpf*)
@@ -10955,14 +10949,10 @@ fi
# before this can be enabled.
hardcode_into_libs=yes
- # Add ABI-specific directories to the system library path.
- sys_lib_dlsearch_path_spec="/lib64 /usr/lib64 /lib /usr/lib"
-
# Append ld.so.conf contents to the search path
if test -f /etc/ld.so.conf; then
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;/^[ ]*hwcap[ ]/d;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;s/"//g;/^$/d' | tr '\n' ' '`
- sys_lib_dlsearch_path_spec="$sys_lib_dlsearch_path_spec $lt_ld_extra"
-
+ sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra"
fi
# We used to test for /lib/ld.so.1 and disable shared libraries on
@@ -15875,14 +15865,10 @@ fi
# before this can be enabled.
hardcode_into_libs=yes
- # Add ABI-specific directories to the system library path.
- sys_lib_dlsearch_path_spec="/lib64 /usr/lib64 /lib /usr/lib"
-
# Append ld.so.conf contents to the search path
if test -f /etc/ld.so.conf; then
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;/^[ ]*hwcap[ ]/d;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;s/"//g;/^$/d' | tr '\n' ' '`
- sys_lib_dlsearch_path_spec="$sys_lib_dlsearch_path_spec $lt_ld_extra"
-
+ sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra"
fi
# We used to test for /lib/ld.so.1 and disable shared libraries on
@@ -18857,14 +18843,10 @@ fi
# before this can be enabled.
hardcode_into_libs=yes
- # Add ABI-specific directories to the system library path.
- sys_lib_dlsearch_path_spec="/lib64 /usr/lib64 /lib /usr/lib"
-
# Append ld.so.conf contents to the search path
if test -f /etc/ld.so.conf; then
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;/^[ ]*hwcap[ ]/d;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;s/"//g;/^$/d' | tr '\n' ' '`
- sys_lib_dlsearch_path_spec="$sys_lib_dlsearch_path_spec $lt_ld_extra"
-
+ sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra"
fi
# We used to test for /lib/ld.so.1 and disable shared libraries on
@@ -19401,13 +19383,13 @@ ac_compile='$CXX -c $CXXFLAGS $CPPFLAGS conftest.$ac_ext >&5'
ac_link='$CXX -o conftest$ac_exeext $CXXFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
ac_compiler_gnu=$ac_cv_cxx_compiler_gnu
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MMDB_CCIF_Init in -lmmdb" >&5
-$as_echo_n "checking for MMDB_CCIF_Init in -lmmdb... " >&6; }
-if ${ac_cv_lib_mmdb_MMDB_CCIF_Init+:} false; then :
+ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MMDB_CCIF_Init in -lmmdb2" >&5
+$as_echo_n "checking for MMDB_CCIF_Init in -lmmdb2... " >&6; }
+if ${ac_cv_lib_mmdb2_MMDB_CCIF_Init+:} false; then :
$as_echo_n "(cached) " >&6
else
ac_check_lib_save_LIBS=$LIBS
-LIBS="-lmmdb $LIBS"
+LIBS="-lmmdb2 $LIBS"
cat confdefs.h - <<_ACEOF >conftest.$ac_ext
/* end confdefs.h. */
@@ -19427,21 +19409,21 @@ return MMDB_CCIF_Init ();
}
_ACEOF
if ac_fn_cxx_try_link "$LINENO"; then :
- ac_cv_lib_mmdb_MMDB_CCIF_Init=yes
+ ac_cv_lib_mmdb2_MMDB_CCIF_Init=yes
else
- ac_cv_lib_mmdb_MMDB_CCIF_Init=no
+ ac_cv_lib_mmdb2_MMDB_CCIF_Init=no
fi
rm -f core conftest.err conftest.$ac_objext \
conftest$ac_exeext conftest.$ac_ext
LIBS=$ac_check_lib_save_LIBS
fi
-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mmdb_MMDB_CCIF_Init" >&5
-$as_echo "$ac_cv_lib_mmdb_MMDB_CCIF_Init" >&6; }
-if test "x$ac_cv_lib_mmdb_MMDB_CCIF_Init" = xyes; then :
+{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_mmdb2_MMDB_CCIF_Init" >&5
+$as_echo "$ac_cv_lib_mmdb2_MMDB_CCIF_Init" >&6; }
+if test "x$ac_cv_lib_mmdb2_MMDB_CCIF_Init" = xyes; then :
:
else
- { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: mmdb library not found." >&5
-$as_echo "$as_me: WARNING: mmdb library not found." >&2;}
+ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: mmdb2 library not found." >&5
+$as_echo "$as_me: WARNING: mmdb2 library not found." >&2;}
fi
ac_ext=c
@@ -20027,7 +20009,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
# report actual input values of CONFIG_FILES etc. instead of their
# values after options handling.
ac_log="
-This file was extended by libccp4 $as_me 6.4.5, which was
+This file was extended by libccp4 $as_me 6.4.6, which was
generated by GNU Autoconf 2.69. Invocation command line was
CONFIG_FILES = $CONFIG_FILES
@@ -20093,7 +20075,7 @@ _ACEOF
cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
ac_cs_version="\\
-libccp4 config.status 6.4.5
+libccp4 config.status 6.4.6
configured by $0, generated by GNU Autoconf 2.69,
with options \\"\$ac_cs_config\\"
diff --git a/configure.ac b/configure.ac
index f4e346a..916bbc0 100644
--- a/configure.ac
+++ b/configure.ac
@@ -1,12 +1,12 @@
-AC_INIT(libccp4, 6.4.5)
+AC_INIT(libccp4, 6.4.6)
AC_CONFIG_AUX_DIR(build-aux)
AC_CONFIG_MACRO_DIR(m4)
AC_CONFIG_SRCDIR(ccp4/cmtzlib.c)
AC_CONFIG_HEADERS(config.h)
AM_INIT_AUTOMAKE([1.11 foreign subdir-objects silent-rules -Wall])
-AM_PROG_AR
+m4_ifdef([AM_PROG_AR], [AM_PROG_AR])
LT_INIT([disable-shared win32-dll])
AC_PROG_CC
@@ -101,8 +101,8 @@ if test "x$enable_fortran" != "xno"; then
AC_SEARCH_LIBS(cos, m, , AC_MSG_ERROR([math library not found.]))
AC_LANG_PUSH([C++])
- AC_CHECK_LIB(mmdb, MMDB_CCIF_Init, :,
- AC_MSG_WARN([mmdb library not found.]))
+ AC_CHECK_LIB(mmdb2, MMDB_CCIF_Init, :,
+ AC_MSG_WARN([mmdb2 library not found.]))
AC_LANG_POP([C++])
fi #dnl fortran API elements
diff --git a/m4/libtool.m4 b/m4/libtool.m4
index f12cfdf..44e0ecf 100644
--- a/m4/libtool.m4
+++ b/m4/libtool.m4
@@ -1312,7 +1312,7 @@ ia64-*-hpux*)
rm -rf conftest*
;;
-x86_64-*kfreebsd*-gnu|x86_64-*linux*|powerpc*-*linux*| \
+x86_64-*kfreebsd*-gnu|x86_64-*linux*|ppc*-*linux*|powerpc*-*linux*| \
s390*-*linux*|s390*-*tpf*|sparc*-*linux*)
# Find out which ABI we are using.
echo 'int i;' > conftest.$ac_ext
@@ -1326,10 +1326,7 @@ s390*-*linux*|s390*-*tpf*|sparc*-*linux*)
x86_64-*linux*)
LD="${LD-ld} -m elf_i386"
;;
- powerpc64le-*linux*)
- LD="${LD-ld} -m elf32lppclinux"
- ;;
- powerpc64-*linux*)
+ ppc64-*linux*|powerpc64-*linux*)
LD="${LD-ld} -m elf32ppclinux"
;;
s390x-*linux*)
@@ -1348,10 +1345,7 @@ s390*-*linux*|s390*-*tpf*|sparc*-*linux*)
x86_64-*linux*)
LD="${LD-ld} -m elf_x86_64"
;;
- powerpcle-*linux*)
- LD="${LD-ld} -m elf64lppc"
- ;;
- powerpc-*linux*)
+ ppc*-*linux*|powerpc*-*linux*)
LD="${LD-ld} -m elf64ppc"
;;
s390*-*linux*|s390*-*tpf*)
@@ -2675,14 +2669,10 @@ linux* | k*bsd*-gnu | kopensolaris*-gnu)
# before this can be enabled.
hardcode_into_libs=yes
- # Add ABI-specific directories to the system library path.
- sys_lib_dlsearch_path_spec="/lib64 /usr/lib64 /lib /usr/lib"
-
# Append ld.so.conf contents to the search path
if test -f /etc/ld.so.conf; then
lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \[$]2)); skip = 1; } { if (!skip) print \[$]0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;/^[ ]*hwcap[ ]/d;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;s/"//g;/^$/d' | tr '\n' ' '`
- sys_lib_dlsearch_path_spec="$sys_lib_dlsearch_path_spec $lt_ld_extra"
-
+ sys_lib_dlsearch_path_spec="/lib /usr/lib $lt_ld_extra"
fi
# We used to test for /lib/ld.so.1 and disable shared libraries on
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/libccp4.git
More information about the debian-science-commits
mailing list