[clipper] 02/05: Merge tag 'upstream/2.1.20140911'

[Frédéric-Emmanuel Picca]

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picca pushed a commit to branch master
in repository clipper.

commit b90f61fea97534caaee19d01359d42453b4f4137
Merge: c588033 47e9d41
Author: Picca Frédéric-Emmanuel <picca at debian.org>
Date:   Wed Dec 31 11:22:02 2014 +0100

    Merge tag 'upstream/2.1.20140911'
    
    Upstream version 2.1.20140911

 Makefile.in                              |  236 ++--
 aclocal.m4                               |  276 +++--
 build-aux/ar-lib                         |    2 +-
 build-aux/config.guess                   |  619 +++++-----
 build-aux/config.sub                     |  290 +++--
 build-aux/depcomp                        |  531 ++++++---
 build-aux/install-sh                     |   35 +-
 build-aux/missing                        |  461 +++-----
 clipper.pc.in                            |    2 +-
 clipper/Makefile.am                      |   24 +-
 clipper/Makefile.in                      |  345 +++---
 clipper/cif/cif_data_io.cpp              |  123 +-
 clipper/clipper-mmdbold.h                |    9 -
 clipper/contrib/Makefile.in              |  157 ++-
 clipper/core/Makefile.am                 |    4 +-
 clipper/core/Makefile.in                 |  161 +--
 clipper/core/clipper_sysdep.h            |   10 +-
 clipper/core/ramachandran.cpp            | 1831 ++++++++++++++++++++++++++++++
 clipper/core/ramachandran.h              |    2 +-
 clipper/core/spacegroup.cpp              |    2 +-
 clipper/minimol/minimol_io.cpp           |   34 +-
 clipper/mmdb/clipper_mmdb.cpp            |   66 +-
 clipper/mmdb/clipper_mmdb.h              |   36 +-
 clipper/mmdbold/clipper_mmdb.cpp         |  888 ---------------
 clipper/mmdbold/clipper_mmdb.h           |  519 ---------
 clipper/mmdbold/clipper_mmdb_types.cpp   |  171 ---
 clipper/mmdbold/clipper_mmdb_types.h     |  272 -----
 clipper/mmdbold/clipper_mmdb_wrapper.cpp |  103 --
 clipper/mmdbold/clipper_mmdb_wrapper.h   |  110 --
 clipper/mmdbold/container_mmdb.cpp       |   95 --
 clipper/mmdbold/container_mmdb.h         |   74 --
 configure                                | 1207 ++++++++++----------
 configure.ac                             |   25 +-
 examples/Makefile.am                     |    2 +-
 examples/Makefile.in                     |  153 ++-
 examples/maketestdata.cpp                |    2 +-
 examples/sftest.cpp                      |    2 +-
 m4/fftw.m4                               |   20 +-
 38 files changed, 4334 insertions(+), 4565 deletions(-)

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