[pyfai] 02/06: Merge tag 'upstream/0.10.0' into experimental
Frédéric-Emmanuel Picca
picca at moszumanska.debian.org
Fri Oct 17 12:41:03 UTC 2014
This is an automated email from the git hooks/post-receive script.
picca pushed a commit to branch experimental
in repository pyfai.
commit 4989b0353d9b7c61fb1db73aa5283164885023fc
Merge: 4f7ee09 1b6f03f
Author: Picca Frédéric-Emmanuel <picca at synchrotron-soleil.fr>
Date: Fri Oct 17 12:52:52 2014 +0200
Merge tag 'upstream/0.10.0' into experimental
Upstream version 0.10.0
CHANGELOG.txt | 52 +-
MANIFEST.in | 27 +-
PKG-INFO | 31 +-
README.txt | 113 +-
TODO.txt | 15 +-
benchmark/benchmark.py | 706 +-
benchmark/benchmark_distortion.py | 52 +
benchmark/benchmark_ocl_csr3.py | 428 +
benchmark/{benchmark.py => benchmark_split.py} | 411 +-
build-deb.sh | 12 +-
calibration/Au.D | 21 +-
calibration/CeO2.D | 81 +-
calibration/LaB6.D | 39 +-
calibration/NaCl.D | 18 +
calibration/PBBA.D | 81 +
calibration/Si.D | 27 +-
calibration/alpha_Al2O3.D | 62 +-
doc/MX-calibrate.1 | 74 +-
doc/MX-calibrate.pdf | Bin 7377 -> 7268 bytes
doc/check_calib.1 | 39 +-
doc/check_calib.pdf | Bin 4148 -> 4435 bytes
doc/diff_tomo.1 | 61 +-
doc/diff_tomo.pdf | Bin 5127 -> 4990 bytes
doc/drawMask_pymca.1 | 33 +-
doc/drawMask_pymca.pdf | Bin 4166 -> 3989 bytes
doc/pyFAI-API.pdf | Bin 492113 -> 0 bytes
doc/pyFAI-average.1 | 44 +-
doc/pyFAI-average.pdf | Bin 4484 -> 4479 bytes
doc/pyFAI-calib.1 | 128 +-
doc/pyFAI-calib.pdf | Bin 8621 -> 8635 bytes
doc/pyFAI-integrate.1 | 35 +-
doc/pyFAI-integrate.pdf | Bin 4658 -> 4551 bytes
doc/pyFAI-recalib.1 | 136 +-
doc/pyFAI-recalib.pdf | Bin 8655 -> 9054 bytes
doc/pyFAI-saxs.1 | 50 +-
doc/pyFAI-saxs.pdf | Bin 5014 -> 4728 bytes
doc/pyFAI-waxs.1 | 61 +-
doc/pyFAI-waxs.pdf | Bin 4840 -> 5667 bytes
doc/pyFAI.pdf | Bin 1226788 -> 1062868 bytes
doc/source/api/pyFAI.rst | 117 +-
doc/source/biblio.rst | 72 +
doc/source/calibration.rst | 132 +
doc/source/conf.py | 6 +-
doc/source/img/benchmark.png | Bin 108107 -> 94791 bytes
doc/source/index.rst | 17 +-
doc/source/man/MX-calibrate.rst | 16 +-
doc/source/man/check_calib.rst | 30 +-
doc/source/man/diff_tomo.rst | 2 +-
doc/source/man/drawMask_pymca.rst | 2 +
doc/source/man/pyFAI-average.rst | 2 +-
doc/source/man/pyFAI-calib.rst | 43 +-
doc/source/man/pyFAI-recalib.rst | 10 +-
doc/source/man/pyFAI-waxs.rst | 8 +
doc/source/man/scripts.rst | 36 +-
doc/source/project.rst | 162 +-
doc/source/pyFAI.rst | 191 +-
openCL/ocl_azim_CSR.cl | 425 +
openCL/ocl_azim_LUT.cl | 272 +-
openCL/ocl_azim_kernel2d_2.cl | 15 +-
openCL/ocl_azim_kernel_2.cl | 13 +-
openCL/ocl_bispev.cl | 191 +
openCL/ocl_hist_pixelsplit.cl | 371 +
openCL/ocl_lut_pixelsplit.cl | 603 +
openCL/ocl_lut_pixelsplit2.cl | 603 +
openCL/ocl_lut_pixelsplit3.cl | 620 +
openCL/ocl_lut_pixelsplit_test.cl | 603 +
openCL/{ocl_azim_LUT.cl => preprocess.cl} | 189 +-
openCL/reduction_test.cl | 92 +
openCL/reduction_test4.cl | 104 +
pyFAI-src/__init__.py | 4 +-
pyFAI-src/azimuthalIntegrator.py | 1090 +-
pyFAI-src/blob_detection.py | 894 +
pyFAI-src/calibrant.py | 298 +
pyFAI-src/calibration.py | 1484 +-
pyFAI-src/detectors.py | 1546 +-
pyFAI-src/distortion.py | 338 +-
pyFAI-src/geometry.py | 361 +-
pyFAI-src/geometryRefinement.py | 67 +-
pyFAI-src/gui_utils.py | 136 +
pyFAI-src/integrate_widget.py | 208 +-
pyFAI-src/io.py | 418 +-
pyFAI-src/massif.py | 291 +
pyFAI-src/ocl_azim.py | 8 +-
pyFAI-src/{ocl_azim_lut.py => ocl_azim_csr.py} | 223 +-
pyFAI-src/{ocl_azim_lut.py => ocl_azim_csr_dis.py} | 193 +-
pyFAI-src/ocl_azim_lut.py | 171 +-
.../{ocl_azim_lut.py => ocl_hist_pixelsplit.py} | 204 +-
pyFAI-src/opencl.py | 79 +-
pyFAI-src/peakPicker.py | 889 -
pyFAI-src/peak_picker.py | 970 +
pyFAI-src/refinment2D.py | 6 +-
pyFAI-src/spline.py | 30 +-
pyFAI-src/units.py | 6 +-
pyFAI-src/utils.py | 195 +-
pyFAI-src/worker.py | 170 +-
scripts/MX-calibrate | 430 +-
scripts/check_calib | 28 +-
scripts/detector2nexus | 152 +
scripts/diff_tomo | 103 +-
scripts/drawMask_pymca | 67 +-
scripts/pyFAI-average | 68 +-
scripts/pyFAI-calib | 12 +-
scripts/pyFAI-integrate | 36 +-
scripts/pyFAI-recalib | 14 +-
scripts/pyFAI-saxs | 88 +-
scripts/pyFAI-waxs | 145 +-
scripts/refine_wavelength | 2 +-
setup.py | 579 +-
src/{relabel.c => _bispev.c} | 29159 ++++++++--------
src/_bispev.pyx | 209 +
src/{reconstruct.c => _blob.c} | 13825 ++++----
src/_blob.pyx | 87 +
src/{relabel.c => _convolution.c} | 24796 +++++++-------
src/_convolution.pyx | 131 +
src/_distortion.c | 25031 +++++++++-----
src/_distortion.pyx | 478 +-
src/{_distortion.c => _distortionCSR.c} | 28803 +++++++---------
src/{_distortion.pyx => _distortionCSR.pyx} | 495 +-
src/_geometry.c | 99 +-
src/bilinear.c | 33666 ++++++++++++-------
src/bilinear.pyx | 87 +-
src/{reconstruct.c => binary_morphology.c} | 9973 +++---
src/fastcrc.c | 89 +-
src/fastcrc.pyx | 1 +
src/fastrebin.pyx | 285 -
src/histogram.c | 14287 ++++----
src/histogram.pyx | 337 +-
src/{_geometry.c => histogram_nomp.c} | 13224 ++++----
src/histogram_nomp.pyx | 200 +
src/{histogram.c => histogram_omp.c} | 14287 ++++----
src/histogram_omp.pyx | 234 +
src/{_geometry.c => marchingsquares.c} | 6823 ++--
src/marchingsquares.pyx | 183 +
src/marchingsquares_.pyx | 113 -
src/{relabel.c => morphology.c} | 2659 +-
src/morphology.pyx | 85 +
src/reconstruct.c | 284 +-
src/relabel.c | 91 +-
src/sparse_csr.c | 2777 +-
src/splitBBox.c | 91 +-
src/{splitBBoxLUT.c => splitBBoxCSR.c} | 32973 ++++++++++--------
src/splitBBoxCSR.pyx | 1286 +
src/splitBBoxLUT.c | 16161 ++++++---
src/splitBBoxLUT.pyx | 798 +-
src/{splitBBoxLUT.c => splitBBoxLUT_vector.c} | 11793 ++++---
src/{splitBBoxLUT.pyx => splitBBoxLUT_vector.pyx} | 447 +-
src/splitPixel.c | 16791 ++++-----
src/splitPixel.pyx | 405 +-
src/{histogram.c => splitPixelFull.c} | 16494 ++++-----
src/splitPixelFull.pyx | 751 +
src/{splitPixel.c => splitPixelFullCSR.c} | 15794 ++++-----
src/splitPixelFullCSR.pyx | 1012 +
src/{splitBBox.c => splitPixelFullLUT.c} | 22277 ++++++------
src/splitPixelFullLUT.pyx | 1145 +
src/{splitPixel.c => splitPixelFullLUT_b.c} | 14935 ++++----
src/splitPixelFullLUT_b.pyx | 979 +
src/{splitPixel.c => splitPixelFullLUT_double.c} | 15208 +++++----
src/splitPixelFullLUT_double.pyx | 1091 +
...{splitPixel.c => splitPixelFullLUT_float32_b.c} | 15927 ++++-----
src/splitPixelFullLUT_float32_b.pyx | 1021 +
src/{marchingsquares_.c => xutils.c} | 4253 ++-
stdeb.cfg | 7 +-
test/testBilinear.py | 93 -
test/testDetector.py | 81 -
test/testHistogram.py | 225 -
test/test_all.py | 53 +-
...lIntegrator.py => test_azimuthal_integrator.py} | 39 +-
test/test_bilinear.py | 132 +-
test/test_bispev.py | 112 +
test/test_blob_detection.py | 74 +
test/test_calibrant.py | 69 +
test/test_convolution.py | 68 +
test/test_csr.py | 129 +
test/test_detector.py | 211 +
test/{testDistortion.py => test_distortion.py} | 0
test/{testExport.py => test_export.py} | 47 +-
test/{testFlat.py => test_flat.py} | 61 +-
test/{testGeometry.py => test_geometry.py} | 0
...ryRefinement.py => test_geometry_refinement.py} | 17 +-
test/test_histogram.py | 314 +
test/{testIntegrate.py => test_integrate.py} | 4 +-
test/test_io.py | 152 +
test/test_marchingsquares.py | 70 +
test/{testMask.py => test_mask.py} | 0
test/{testOpenCL.py => test_openCL.py} | 66 +-
test/{testPeakPicking.py => test_peak_picking.py} | 12 +-
test/{testPolarization.py => test_polarization.py} | 6 +-
test/{testSaxs.py => test_saxs.py} | 0
test/test_sparse.py | 61 +
test/test_split_pixel.py | 98 +
test/{testUtils.py => test_utils.py} | 0
test/testimages/Fairchild.edf | 200 +
test/testimages/LaB6_260210.mar3450 | Bin 0 -> 7473209 bytes
test/utilstest.py | 241 +-
194 files changed, 245437 insertions(+), 191422 deletions(-)
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