[apophenia] branch master updated (2acff20 -> d108097)

[Jerome Benoit]

This is an automated email from the git hooks/post-receive script.

calculus-guest pushed a change to branch master
in repository apophenia.

      from  2acff20   Primary Debian patch 0.999a+ds-1
      adds  5280f2c   Imported Upstream version 0.999b
       new  b3ab0f6   Merge tag 'upstream/0.999b'
      adds  2b895e6   Imported Upstream version 0.999b+ds
       new  6bc1951   Merge tag 'upstream/0.999b+ds'
       new  d108097   Imported Debian patch 0.999b+ds-1

The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 ChangeLog                                          |    5 +
 Makefile.am                                        |  156 +-
 NEWS                                               |    5 +
 apop.h                                             |   55 +-
 apop_conversions.c                                 |    6 +-
 apop_db.c                                          |   35 -
 apop_internal.h                                    |    4 +-
 apop_mcmc.c                                        |    2 +-
 apop_mle.c                                         |   42 +-
 apop_output.c                                      |  308 --
 apop_sort.c                                        |    2 +-
 apop_stats.c                                       |   54 +-
 apop_update.c                                      |   16 +-
 apophenia.map                                      |  335 ++
 apophenia.pc.in                                    |    8 +-
 cmd/Makefile.am                                    |   14 +
 cmd/apop_db_to_crosstab.c                          |   21 +-
 cmd/apop_plot_query.c                              |   54 +-
 cmd/apop_text_to_db.c                              |   41 +-
 configure.ac                                       |  106 +-
 debian/changelog                                   |   10 +-
 debian/libapophenia0.symbols                       |   12 -
 debian/patches/debianization-adhoc.patch           |    9 +-
 ...ianization-bug-597187_757967-mysql_config.patch |    3 +-
 debian/patches/debianization.patch                 |    4 +-
 debian/patches/series                              |    6 +-
 debian/patches/upstream-C2help2man.patch           |  157 -
 debian/patches/upstream-doxygen-typo.patch         |   86 -
 .../patches/upstream-error-format_security.patch   |   25 -
 .../upstream-rationalization-autotools.patch       | 4269 --------------------
 .../upstream-rationalization-version_script.patch  |  360 --
 debian/repack                                      |   87 +-
 debian/watch                                       |    2 +-
 docs/Makefile.am                                   |   60 +
 docs/documentation.h                               |   51 +-
 docs/{doxyconfig => doxygen.conf.in}               | 1674 +++++---
 docs/edit_globals.sed                              |    5 +
 docs/{edit_group => edit_group.sed}                |    0
 docs/edit_outline.sed                              |    3 +
 docs/edit_width.sed                                |    1 +
 eg/Makefile.am                                     |   38 +
 eg/simple_subsets.c                                |   10 +-
 model/Makefile.am                                  |   30 +
 model/apop_histogram.c                             |   55 +-
 model/apop_normal.c                                |    2 +-
 model/apop_ols.c                                   |    2 +-
 tests/Makefile.am                                  |   94 +-
 tests/db_tests.c                                   |   24 +-
 tests/error_test.c                                 |    2 +-
 tests/nist_tests.c                                 |   14 +-
 tests/sort_example.c                               |   15 +-
 tests/test_apop.c                                  |   24 +-
 tests/test_kernel_ll.c                             |   36 +
 tests/utilities_test                               |   52 -
 tests/utilities_test.in                            |   61 +
 transform/Makefile.am                              |   17 +
 transform/apop_fix_params.c                        |   68 +-
 transform/apop_stack.c                             |    2 +-
 58 files changed, 2272 insertions(+), 6367 deletions(-)
 create mode 100644 apophenia.map
 create mode 100644 cmd/Makefile.am
 delete mode 100644 debian/patches/upstream-C2help2man.patch
 delete mode 100644 debian/patches/upstream-doxygen-typo.patch
 delete mode 100644 debian/patches/upstream-error-format_security.patch
 delete mode 100644 debian/patches/upstream-rationalization-autotools.patch
 delete mode 100644 debian/patches/upstream-rationalization-version_script.patch
 create mode 100644 docs/Makefile.am
 rename docs/{doxyconfig => doxygen.conf.in} (54%)
 create mode 100644 docs/edit_globals.sed
 rename docs/{edit_group => edit_group.sed} (100%)
 create mode 100644 docs/edit_outline.sed
 create mode 100644 docs/edit_width.sed
 create mode 100644 eg/Makefile.am
 create mode 100644 model/Makefile.am
 create mode 100644 tests/test_kernel_ll.c
 delete mode 100755 tests/utilities_test
 create mode 100644 tests/utilities_test.in
 create mode 100644 transform/Makefile.am

-- 
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