[suitesparse] branch master updated (be96a67 -> bb1737e)

Sébastien Villemot sebastien at debian.org
Sat Jan 17 21:10:06 UTC 2015


This is an automated email from the git hooks/post-receive script.

sebastien pushed a change to branch master
in repository suitesparse.

      from  be96a67   debian/control: update homepage URL.
       new  9a6bfc2   Improvement to debian/watch.
      adds  67ac24f   Imported Upstream version 4.4.2
       new  fce2c70   Merge tag 'upstream/4.4.2'
       new  bb1737e   debian/copyright: update, rewrite using machine-readable format 1.0.

The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 AMD/Demo/Makefile                                  |     11 +-
 AMD/Demo/amd_demo.out                              |      6 +-
 AMD/Demo/amd_demo2.out                             |      4 +-
 AMD/Demo/amd_l_demo.out                            |      6 +-
 AMD/Doc/AMD_UserGuide.pdf                          |    Bin 256147 -> 271996 bytes
 AMD/Doc/AMD_UserGuide.tex                          |      4 +-
 AMD/Doc/ChangeLog                                  |     10 +-
 AMD/Include/amd.h                                  |     19 +-
 AMD/Include/amd_internal.h                         |     31 +-
 AMD/Lib/GNUmakefile                                |      5 +-
 AMD/Lib/Makefile                                   |      3 +-
 AMD/MATLAB/amd_make.m                              |     16 +-
 AMD/MATLAB/amd_mex.c                               |      6 -
 AMD/Makefile                                       |      2 +-
 AMD/README.txt                                     |      2 +-
 AMD/Source/amd_control.c                           |     13 +-
 AMD/Source/amd_global.c                            |     75 +-
 AMD/Source/amd_info.c                              |     20 +-
 AMD/Source/amd_order.c                             |     40 +-
 BTF/Doc/ChangeLog                                  |      4 +
 BTF/Include/btf.h                                  |      4 +-
 BTF/MATLAB/btf_make.m                              |      5 +
 BTF/Makefile                                       |      2 +-
 CAMD/Demo/Makefile                                 |     11 +-
 CAMD/Demo/camd_demo.out                            |      7 +-
 CAMD/Demo/camd_demo2.out                           |      5 +-
 CAMD/Demo/camd_l_demo.out                          |      7 +-
 CAMD/Doc/CAMD_UserGuide.pdf                        |    Bin 249742 -> 265441 bytes
 CAMD/Doc/CAMD_UserGuide.tex                        |      4 +-
 CAMD/Doc/ChangeLog                                 |     10 +-
 CAMD/Include/camd.h                                |     19 +-
 CAMD/Include/camd_internal.h                       |     35 +-
 CAMD/Lib/GNUmakefile                               |      5 +-
 CAMD/Lib/Makefile                                  |      3 +-
 CAMD/MATLAB/camd_make.m                            |     16 +-
 CAMD/MATLAB/camd_mex.c                             |      6 -
 CAMD/Makefile                                      |      4 +-
 CAMD/README.txt                                    |      2 +-
 CAMD/Source/camd_control.c                         |     13 +-
 CAMD/Source/camd_global.c                          |     75 +-
 CAMD/Source/camd_info.c                            |     23 +-
 CAMD/Source/camd_order.c                           |     40 +-
 CCOLAMD/Demo/Makefile                              |      7 +-
 CCOLAMD/Demo/ccolamd_example.out                   |      4 +-
 CCOLAMD/Demo/ccolamd_l_example.out                 |      4 +-
 CCOLAMD/Doc/ChangeLog                              |      8 +
 CCOLAMD/Include/ccolamd.h                          |     12 +-
 CCOLAMD/Lib/Makefile                               |      5 +-
 CCOLAMD/MATLAB/ccolamd_make.m                      |     20 +-
 CCOLAMD/MATLAB/ccolamd_test.m                      |      6 +-
 CCOLAMD/Makefile                                   |      2 +-
 CCOLAMD/README.txt                                 |      2 +-
 CCOLAMD/Source/ccolamd.c                           |     95 +-
 CCOLAMD/Source/ccolamd_global.c                    |     16 +-
 CHOLMOD/Check/cholmod_check.c                      |     23 +-
 CHOLMOD/Cholesky/cholmod_amd.c                     |     11 -
 CHOLMOD/Cholesky/cholmod_analyze.c                 |     10 +-
 CHOLMOD/Cholesky/cholmod_colamd.c                  |      3 -
 CHOLMOD/Cholesky/cholmod_rowfac.c                  |     40 +-
 CHOLMOD/Cholesky/cholmod_solve.c                   |      3 -
 CHOLMOD/Cholesky/t_cholmod_rowfac.c                |      6 +-
 CHOLMOD/Core/cholmod_common.c                      |    136 +-
 CHOLMOD/Core/cholmod_complex.c                     |     67 +-
 CHOLMOD/Core/cholmod_dense.c                       |     15 -
 CHOLMOD/Core/cholmod_error.c                       |      8 +-
 CHOLMOD/Core/cholmod_factor.c                      |      1 +
 CHOLMOD/Core/cholmod_memory.c                      |     55 +-
 CHOLMOD/Demo/Makefile                              |      6 +-
 CHOLMOD/Demo/cholmod_demo.c                        |      5 +
 CHOLMOD/Demo/cholmod_demo.h                        |      1 +
 CHOLMOD/Demo/cholmod_l_demo.c                      |    136 +-
 CHOLMOD/Demo/gpu.sh                                |      4 +
 CHOLMOD/Doc/ChangeLog                              |     39 +
 ...2014_Workshop_Rennich_Stosic_Davis_preprint.pdf |    Bin 0 -> 1553980 bytes
 CHOLMOD/Doc/UserGuide.pdf                          |    Bin 552769 -> 562847 bytes
 CHOLMOD/Doc/UserGuide.tex                          |    164 +-
 CHOLMOD/GPU/cholmod_gpu.c                          |    479 +
 CHOLMOD/GPU/cholmod_gpu_kernels.c                  |      6 +
 CHOLMOD/GPU/cholmod_gpu_kernels.cu                 |    196 +
 CHOLMOD/GPU/t_cholmod_gpu.c                        |   1397 +
 CHOLMOD/Include/cholmod.h                          |      5 +
 CHOLMOD/Include/cholmod_cholesky.h                 |     26 +-
 CHOLMOD/Include/cholmod_complexity.h               |      7 +-
 CHOLMOD/Include/cholmod_core.h                     |    277 +-
 CHOLMOD/Include/cholmod_function.h                 |    155 +
 CHOLMOD/Include/cholmod_gpu.h                      |     80 +
 CHOLMOD/Include/cholmod_gpu_kernels.h              |     50 +
 CHOLMOD/Include/cholmod_internal.h                 |     35 +-
 CHOLMOD/Include/cholmod_modify.h                   |     21 +
 CHOLMOD/Include/cholmod_supernodal.h               |      8 +-
 CHOLMOD/Include/cholmod_template.h                 |      7 +
 CHOLMOD/Lib/Makefile                               |     35 +-
 CHOLMOD/MATLAB/Test/test3.m                        |     31 +-
 CHOLMOD/MATLAB/cholmod_make.m                      |     11 +-
 CHOLMOD/MATLAB/cholmod_matlab.c                    |     18 +-
 CHOLMOD/MATLAB/ldlchol.c                           |      2 +-
 CHOLMOD/MATLAB/mread.c                             |      2 +-
 CHOLMOD/Makefile                                   |      2 +-
 CHOLMOD/MatrixOps/cholmod_norm.c                   |      4 +-
 CHOLMOD/Modify/cholmod_updown.c                    |     39 +-
 CHOLMOD/Modify/t_cholmod_updown.c                  |      3 +-
 CHOLMOD/Partition/cholmod_camd.c                   |     11 -
 CHOLMOD/Partition/cholmod_csymamd.c                |     13 +-
 CHOLMOD/README.txt                                 |      2 +-
 CHOLMOD/Supernodal/cholmod_super_numeric.c         |     18 +-
 CHOLMOD/Supernodal/cholmod_super_symbolic.c        |    162 +-
 CHOLMOD/Supernodal/t_cholmod_gpu.c                 |    972 -
 CHOLMOD/Supernodal/t_cholmod_super_numeric.c       |   1324 +-
 CHOLMOD/Tcov/Makefile                              |    407 +-
 CHOLMOD/Tcov/Matrix/C9840                          |  30502 +++
 CHOLMOD/Tcov/amdtest.c                             |     10 +-
 CHOLMOD/Tcov/camdtest.c                            |     10 +-
 CHOLMOD/Tcov/cctest.c                              |     64 +-
 CHOLMOD/Tcov/cm.c                                  |     76 +-
 CHOLMOD/Tcov/cm.h                                  |      1 +
 CHOLMOD/Tcov/ctest.c                               |     69 +-
 CHOLMOD/Tcov/go                                    |     15 +
 CHOLMOD/Tcov/memory.c                              |     21 +-
 CHOLMOD/Tcov/null2.c                               |      3 +
 COLAMD/Demo/Makefile                               |      7 +-
 COLAMD/Demo/colamd_example.out                     |      4 +-
 COLAMD/Demo/colamd_l_example.out                   |      4 +-
 COLAMD/Doc/ChangeLog                               |      8 +
 COLAMD/Include/colamd.h                            |     12 +-
 COLAMD/Lib/Makefile                                |      5 +-
 COLAMD/MATLAB/colamd_make.m                        |     20 +-
 COLAMD/MATLAB/colamd_test.m                        |      6 +-
 COLAMD/MATLAB/colamdmex.c                          |      2 -
 COLAMD/MATLAB/colamdtestmex.c                      |      2 -
 COLAMD/MATLAB/symamdmex.c                          |      2 -
 COLAMD/MATLAB/symamdtestmex.c                      |      2 -
 COLAMD/Makefile                                    |      2 +-
 COLAMD/README.txt                                  |      2 +-
 COLAMD/Source/colamd.c                             |     95 +-
 COLAMD/Source/colamd_global.c                      |     16 +-
 CSparse/Demo/cs_demo.out                           |     44 +-
 CSparse/Doc/ChangeLog                              |      8 +
 CSparse/Include/cs.h                               |      6 +-
 CSparse/MATLAB/CSparse/cs_make.m                   |      5 +
 CSparse/MATLAB/UFget/mat/UF_Index.mat              |    Bin 95255 -> 117643 bytes
 CSparse/MATLAB/cs_install.m                        |     20 +-
 CSparse/Makefile                                   |      2 +-
 CSparse/README.txt                                 |      2 +-
 CXSparse/Demo/cs_demo.out                          |    372 +-
 CXSparse/Doc/ChangeLog                             |      8 +
 CXSparse/Include/cs.h                              |      6 +-
 CXSparse/MATLAB/CSparse/private/cs_make_helper.m   |      5 +
 CXSparse/MATLAB/UFget/mat/UF_Index.mat             |    Bin 95255 -> 117643 bytes
 CXSparse/MATLAB/cs_install.m                       |     20 +-
 CXSparse/Makefile                                  |      2 +-
 CXSparse_newfiles.tar.gz                           |    Bin 577677 -> 0 bytes
 CXSparse_newfiles/Include/cs.h                     |      6 +-
 .../MATLAB/CSparse/private/cs_make_helper.m        |      5 +
 CXSparse_newfiles/MATLAB/cs_install.m              |     20 +-
 CXSparse_newfiles/Makefile                         |      2 +-
 ChangeLog                                          |    483 +
 Contents.m                                         |      2 +-
 GPUQREngine/Demo/Makefile                          |     40 +
 GPUQREngine/Demo/README.txt                        |     12 +
 GPUQREngine/Demo/gpuqrengine_demo.cpp              |    337 +
 GPUQREngine/Doc/ChangeLog                          |      3 +
 {CHOLMOD/Demo => GPUQREngine/Doc}/gpl.txt          |      0
 GPUQREngine/Include/GPUQREngine.hpp                |     58 +
 GPUQREngine/Include/GPUQREngine_BucketList.hpp     |    168 +
 GPUQREngine/Include/GPUQREngine_Common.hpp         |     82 +
 GPUQREngine/Include/GPUQREngine_Front.hpp          |    167 +
 GPUQREngine/Include/GPUQREngine_FrontState.hpp     |     30 +
 GPUQREngine/Include/GPUQREngine_GraphVizHelper.hpp |     19 +
 GPUQREngine/Include/GPUQREngine_Internal.hpp       |     37 +
 GPUQREngine/Include/GPUQREngine_LLBundle.hpp       |     96 +
 GPUQREngine/Include/GPUQREngine_SEntry.hpp         |     25 +
 GPUQREngine/Include/GPUQREngine_Scheduler.hpp      |    168 +
 GPUQREngine/Include/GPUQREngine_SparseMeta.hpp     |     82 +
 GPUQREngine/Include/GPUQREngine_Stats.hpp          |     31 +
 GPUQREngine/Include/GPUQREngine_TaskDescriptor.hpp |    117 +
 GPUQREngine/Include/GPUQREngine_Timing.hpp         |     46 +
 GPUQREngine/Include/Kernel/Apply/block_apply.cu    |    219 +
 GPUQREngine/Include/Kernel/Apply/block_apply_1.cu  |     12 +
 .../Include/Kernel/Apply/block_apply_1_by_1.cu     |     12 +
 GPUQREngine/Include/Kernel/Apply/block_apply_2.cu  |     12 +
 .../Include/Kernel/Apply/block_apply_2_by_1.cu     |     12 +
 GPUQREngine/Include/Kernel/Apply/block_apply_3.cu  |     12 +
 .../Include/Kernel/Apply/block_apply_3_by_1.cu     |     12 +
 .../Include/Kernel/Apply/block_apply_chunk.cu      |    529 +
 GPUQREngine/Include/Kernel/Apply/cevta_tile.cu     |    152 +
 GPUQREngine/Include/Kernel/Apply/params_apply.hpp  |     63 +
 .../Include/Kernel/Apply/pipelined_rearrange.cu    |    195 +
 .../Include/Kernel/Assemble/packAssemble.cu        |     57 +
 GPUQREngine/Include/Kernel/Assemble/sAssemble.cu   |     19 +
 .../Include/Kernel/Factorize/factorize_3_by_1.cu   |     14 +
 .../Include/Kernel/Factorize/factorize_vt.cu       |    568 +
 .../Kernel/Factorize/factorize_vt_1_by_1.cu        |     14 +
 .../Kernel/Factorize/factorize_vt_1_by_1_edge.cu   |     15 +
 .../Kernel/Factorize/factorize_vt_2_by_1.cu        |     14 +
 .../Kernel/Factorize/factorize_vt_2_by_1_edge.cu   |     15 +
 .../Kernel/Factorize/factorize_vt_3_by_1.cu        |     14 +
 .../Kernel/Factorize/factorize_vt_3_by_1_edge.cu   |     15 +
 GPUQREngine/Include/Kernel/qrKernel.cu             |     74 +
 GPUQREngine/Include/Kernel/sharedMemory.hpp        |     51 +
 GPUQREngine/Include/Kernel/uberKernel.cu           |     45 +
 GPUQREngine/Lib/Makefile                           |    204 +
 GPUQREngine/Makefile                               |     41 +
 GPUQREngine/README.txt                             |     36 +
 GPUQREngine/Source/BucketList/BucketList.cpp       |    129 +
 .../BucketList/BucketList_AdvanceBundles.cpp       |     41 +
 .../Source/BucketList/BucketList_CreateBundles.cpp |    108 +
 .../Source/BucketList/BucketList_FillWorkQueue.cpp |    198 +
 .../Source/BucketList/BucketList_GrowBundles.cpp   |     70 +
 .../Source/BucketList/BucketList_Manage.cpp        |     90 +
 .../BucketList/BucketList_PostProcessing.cpp       |     44 +
 GPUQREngine/Source/GPUQREngine_ExpertDense.cpp     |    217 +
 GPUQREngine/Source/GPUQREngine_ExpertSparse.cpp    |     30 +
 GPUQREngine/Source/GPUQREngine_GraphVizHelper.cpp  |    216 +
 GPUQREngine/Source/GPUQREngine_Internal.cpp        |     88 +
 GPUQREngine/Source/GPUQREngine_UberKernel.cu       |     30 +
 GPUQREngine/Source/LLBundle/LLBundle.cpp           |     35 +
 GPUQREngine/Source/LLBundle/LLBundle_AddTiles.cpp  |    114 +
 GPUQREngine/Source/LLBundle/LLBundle_Advance.cpp   |     80 +
 GPUQREngine/Source/LLBundle/LLBundle_GPUPack.cpp   |     56 +
 .../LLBundle/LLBundle_PipelinedRearrange.cpp       |    106 +
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 MATLAB_Tools/SFMULT/sfmult.c                       |     10 +-
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 ...nfig_GPU.mk => SuiteSparse_config_GPU_debug.mk} |    167 +-
 ...config_GPU.mk => SuiteSparse_config_GPU_gcc.mk} |    165 +-
 ...config_GPU.mk => SuiteSparse_config_GPU_icc.mk} |    169 +-
 ...nfig_GPU.mk => SuiteSparse_config_GPU_icc10.mk} |    170 +-
 SuiteSparse_config/SuiteSparse_config_Mac.mk       |    171 +-
 ...e_config.mk => SuiteSparse_config_backslash.mk} |    167 +-
 ...parse_config.mk => SuiteSparse_config_linux.mk} |    167 +-
 SuiteSparse_install.m                              |     25 +-
 {CSparse/MATLAB/UFget => UFget}/Contents.m         |      0
 {CSparse/MATLAB/UFget => UFget}/Makefile           |      0
 {CSparse/MATLAB/UFget => UFget}/README.txt         |      0
 {CSparse/MATLAB/UFget => UFget}/UFget.m            |      0
 {CSparse/MATLAB/UFget => UFget}/UFget_defaults.m   |      0
 {CSparse/MATLAB/UFget => UFget}/UFget_example.m    |      0
 {CSparse/MATLAB/UFget => UFget}/UFget_lookup.m     |      0
 {CSparse/MATLAB/UFget => UFget}/UFgrep.m           |      0
 {CSparse/MATLAB/UFget => UFget}/UFgui.jar          |    Bin
 {CSparse/MATLAB/UFget => UFget}/UFgui.java         |      0
 {CSparse/MATLAB/UFget => UFget}/UFhelp.html        |      0
 {CSparse/MATLAB/UFget => UFget}/UFkinds.m          |      0
 {CSparse/MATLAB/UFget => UFget}/UFsettings.txt     |      0
 {CSparse/MATLAB/UFget => UFget}/UFsvd.m            |      0
 {CSparse/MATLAB/UFget => UFget}/UFweb.m            |      0
 UFget/mat/UF_Index.mat                             |    Bin 0 -> 117643 bytes
 .../MATLAB/UFget => UFget}/matrices/UFstats.csv    |      0
 UMFPACK/Demo/Makefile                              |      4 +-
 UMFPACK/Demo/umfpack_di_demo.out                   |     28 +-
 UMFPACK/Demo/umfpack_dl_demo.out                   |     28 +-
 UMFPACK/Demo/umfpack_zi_demo.c                     |      6 +
 UMFPACK/Demo/umfpack_zi_demo.out                   |     28 +-
 UMFPACK/Demo/umfpack_zl_demo.c                     |      7 +
 UMFPACK/Demo/umfpack_zl_demo.out                   |     28 +-
 UMFPACK/Doc/ChangeLog                              |      9 +
 UMFPACK/Doc/QuickStart.pdf                         |    Bin 214283 -> 214188 bytes
 UMFPACK/Doc/QuickStart.tex                         |      4 +-
 UMFPACK/Doc/UserGuide.pdf                          |    Bin 496165 -> 496139 bytes
 UMFPACK/Doc/UserGuide.stex                         |     11 +-
 UMFPACK/Include/umfpack.h                          |     10 +-
 UMFPACK/Include/umfpack_global.h                   |     13 +-
 UMFPACK/Lib/GNUmakefile                            |      2 +-
 UMFPACK/Lib/Makefile                               |      2 -
 UMFPACK/MATLAB/umfpack_make.m                      |      5 +
 UMFPACK/MATLAB/umfpackmex.c                        |     20 -
 UMFPACK/Makefile                                   |      7 +-
 UMFPACK/README.txt                                 |      2 +-
 UMFPACK/Source/umf_cholmod.c                       |      6 -
 UMFPACK/Source/umf_config.h                        |      2 +-
 UMFPACK/Source/umf_free.c                          |      3 +-
 UMFPACK/Source/umf_internal.h                      |     10 +-
 UMFPACK/Source/umf_malloc.c                        |     15 +-
 UMFPACK/Source/umf_realloc.c                       |      3 +-
 UMFPACK/Source/umf_version.h                       |      8 +-
 UMFPACK/Source/umfpack_global.c                    |    121 +-
 UMFPACK/Tcov/AMD_Demo_Makefile                     |     10 +-
 UMFPACK/Tcov/Demo_Makefile                         |      2 +-
 UMFPACK/Tcov/Make.1                                |      2 +-
 UMFPACK/Tcov/Make.2                                |      2 +-
 UMFPACK/Tcov/Make.3                                |      2 +-
 UMFPACK/Tcov/Make.4                                |      2 +-
 UMFPACK/Tcov/Make.5                                |      2 +-
 UMFPACK/Tcov/Make.6                                |      2 +-
 UMFPACK/Tcov/Make.7                                |      2 +-
 UMFPACK/Tcov/Make.8                                |      2 +-
 UMFPACK/Tcov/ut.c                                  |     16 +-
 debian/copyright                                   |    200 +-
 debian/watch                                       |      3 +-
 452 files changed, 278145 insertions(+), 5039 deletions(-)
 create mode 100755 CHOLMOD/Demo/gpu.sh
 create mode 100644 CHOLMOD/Doc/IA3_2014_Workshop_Rennich_Stosic_Davis_preprint.pdf
 create mode 100644 CHOLMOD/GPU/cholmod_gpu.c
 create mode 100644 CHOLMOD/GPU/cholmod_gpu_kernels.c
 create mode 100644 CHOLMOD/GPU/cholmod_gpu_kernels.cu
 create mode 100644 CHOLMOD/GPU/t_cholmod_gpu.c
 create mode 100644 CHOLMOD/Include/cholmod_function.h
 create mode 100644 CHOLMOD/Include/cholmod_gpu.h
 create mode 100644 CHOLMOD/Include/cholmod_gpu_kernels.h
 delete mode 100644 CHOLMOD/Supernodal/t_cholmod_gpu.c
 create mode 100644 CHOLMOD/Tcov/Matrix/C9840
 create mode 100755 CHOLMOD/Tcov/go
 delete mode 100644 CXSparse_newfiles.tar.gz
 create mode 100644 ChangeLog
 create mode 100644 GPUQREngine/Demo/Makefile
 create mode 100644 GPUQREngine/Demo/README.txt
 create mode 100644 GPUQREngine/Demo/gpuqrengine_demo.cpp
 create mode 100644 GPUQREngine/Doc/ChangeLog
 copy {CHOLMOD/Demo => GPUQREngine/Doc}/gpl.txt (100%)
 create mode 100644 GPUQREngine/Include/GPUQREngine.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_BucketList.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_Common.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_Front.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_FrontState.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_GraphVizHelper.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_Internal.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_LLBundle.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_SEntry.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_Scheduler.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_SparseMeta.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_Stats.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_TaskDescriptor.hpp
 create mode 100644 GPUQREngine/Include/GPUQREngine_Timing.hpp
 create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply.cu
 create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_1.cu
 create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_1_by_1.cu
 create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_2.cu
 create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_2_by_1.cu
 create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_3.cu
 create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_3_by_1.cu
 create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_chunk.cu
 create mode 100644 GPUQREngine/Include/Kernel/Apply/cevta_tile.cu
 create mode 100644 GPUQREngine/Include/Kernel/Apply/params_apply.hpp
 create mode 100644 GPUQREngine/Include/Kernel/Apply/pipelined_rearrange.cu
 create mode 100644 GPUQREngine/Include/Kernel/Assemble/packAssemble.cu
 create mode 100644 GPUQREngine/Include/Kernel/Assemble/sAssemble.cu
 create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_3_by_1.cu
 create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt.cu
 create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_1_by_1.cu
 create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_1_by_1_edge.cu
 create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_2_by_1.cu
 create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_2_by_1_edge.cu
 create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_3_by_1.cu
 create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_3_by_1_edge.cu
 create mode 100644 GPUQREngine/Include/Kernel/qrKernel.cu
 create mode 100644 GPUQREngine/Include/Kernel/sharedMemory.hpp
 create mode 100644 GPUQREngine/Include/Kernel/uberKernel.cu
 create mode 100644 GPUQREngine/Lib/Makefile
 create mode 100644 GPUQREngine/Makefile
 create mode 100644 GPUQREngine/README.txt
 create mode 100644 GPUQREngine/Source/BucketList/BucketList.cpp
 create mode 100644 GPUQREngine/Source/BucketList/BucketList_AdvanceBundles.cpp
 create mode 100644 GPUQREngine/Source/BucketList/BucketList_CreateBundles.cpp
 create mode 100644 GPUQREngine/Source/BucketList/BucketList_FillWorkQueue.cpp
 create mode 100644 GPUQREngine/Source/BucketList/BucketList_GrowBundles.cpp
 create mode 100644 GPUQREngine/Source/BucketList/BucketList_Manage.cpp
 create mode 100644 GPUQREngine/Source/BucketList/BucketList_PostProcessing.cpp
 create mode 100644 GPUQREngine/Source/GPUQREngine_ExpertDense.cpp
 create mode 100644 GPUQREngine/Source/GPUQREngine_ExpertSparse.cpp
 create mode 100644 GPUQREngine/Source/GPUQREngine_GraphVizHelper.cpp
 create mode 100644 GPUQREngine/Source/GPUQREngine_Internal.cpp
 create mode 100644 GPUQREngine/Source/GPUQREngine_UberKernel.cu
 create mode 100644 GPUQREngine/Source/LLBundle/LLBundle.cpp
 create mode 100644 GPUQREngine/Source/LLBundle/LLBundle_AddTiles.cpp
 create mode 100644 GPUQREngine/Source/LLBundle/LLBundle_Advance.cpp
 create mode 100644 GPUQREngine/Source/LLBundle/LLBundle_GPUPack.cpp
 create mode 100644 GPUQREngine/Source/LLBundle/LLBundle_PipelinedRearrange.cpp
 create mode 100644 GPUQREngine/Source/LLBundle/LLBundle_UpdateSecondMinIndex.cpp
 create mode 100644 GPUQREngine/Source/Scheduler/Scheduler.cpp
 create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_FillWorkQueue.cpp
 create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_Front.cpp
 create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_LaunchKernel.cpp
 create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_PostProcess.cpp
 create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_Render.cpp
 create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_TransferData.cpp
 create mode 100644 GPUQREngine/Source/Scheduler/ssgpu_maxQueueSize.cpp
 create mode 100644 GPUQREngine/Source/TaskDescriptor/TaskDescriptor_flops.cpp
 create mode 100644 SPQR/Demo/demo_colamd.sh
 create mode 100644 SPQR/Demo/demo_colamd2.sh
 create mode 100644 SPQR/Demo/demo_colamd3.sh
 create mode 100644 SPQR/Demo/demo_metis.sh
 create mode 100644 SPQR/Demo/demo_metis2.sh
 create mode 100644 SPQR/Demo/demo_metis3.sh
 create mode 100644 SPQR/Demo/go4.m
 create mode 100644 SPQR/Demo/go5.m
 delete mode 100644 SPQR/Demo/qrdemo_diary.txt
 create mode 100644 SPQR/Demo/qrdemo_gpu.cpp
 create mode 100644 SPQR/Demo/qrdemo_gpu2.cpp
 create mode 100644 SPQR/Demo/qrdemo_gpu3.cpp
 create mode 100644 SPQR/Demo/spqr_gpu.m
 create mode 100644 SPQR/Demo/spqr_gpu2.m
 create mode 100644 SPQR/Demo/spqr_gpu3.m
 create mode 100644 SPQR/Doc/qrgpu_paper.pdf
 create mode 100644 SPQR/Include/spqrgpu.hpp
 create mode 100644 SPQR/Matrix/Franz6_id1959_aug.mtx
 create mode 100644 SPQR/Matrix/Groebner_id2003_aug.mtx
 create mode 100644 SPQR/Matrix/lp_e226.mtx
 create mode 100644 SPQR/Matrix/lp_e226_transposed.mtx
 create mode 100644 SPQR/SPQRGPU/spqrgpu_buildAssemblyMaps.cpp
 create mode 100644 SPQR/SPQRGPU/spqrgpu_computeFrontStaging.cpp
 create mode 100644 SPQR/SPQRGPU/spqrgpu_kernel.cpp
 delete mode 100644 SPQR/Tcov/make_output.txt
 create mode 100644 SuiteSparse_GPURuntime/Doc/ChangeLog
 copy {CHOLMOD/Demo => SuiteSparse_GPURuntime/Doc}/gpl.txt (100%)
 create mode 100644 SuiteSparse_GPURuntime/Include/SuiteSparseGPU_Runtime.hpp
 create mode 100644 SuiteSparse_GPURuntime/Include/SuiteSparseGPU_Workspace.hpp
 create mode 100644 SuiteSparse_GPURuntime/Include/SuiteSparseGPU_debug.hpp
 create mode 100644 SuiteSparse_GPURuntime/Include/SuiteSparseGPU_macros.hpp
 create mode 100644 SuiteSparse_GPURuntime/Include/SuiteSparseGPU_workspace_macros.hpp
 create mode 100644 SuiteSparse_GPURuntime/Lib/Makefile
 create mode 100644 SuiteSparse_GPURuntime/Makefile
 create mode 100644 SuiteSparse_GPURuntime/README.txt
 create mode 100644 SuiteSparse_GPURuntime/Source/SuiteSparseGPU_Workspace.cpp
 create mode 100644 SuiteSparse_GPURuntime/Source/SuiteSparseGPU_Workspace_cpuAllocators.cpp
 create mode 100644 SuiteSparse_GPURuntime/Source/SuiteSparseGPU_Workspace_gpuAllocators.cpp
 create mode 100644 SuiteSparse_GPURuntime/Source/SuiteSparseGPU_Workspace_transfer.cpp
 copy SuiteSparse_config/{SuiteSparse_config_GPU.mk => SuiteSparse_config_GPU_debug.mk} (71%)
 copy SuiteSparse_config/{SuiteSparse_config_GPU.mk => SuiteSparse_config_GPU_gcc.mk} (71%)
 copy SuiteSparse_config/{SuiteSparse_config_GPU.mk => SuiteSparse_config_GPU_icc.mk} (71%)
 rename SuiteSparse_config/{SuiteSparse_config_GPU.mk => SuiteSparse_config_GPU_icc10.mk} (71%)
 copy SuiteSparse_config/{SuiteSparse_config.mk => SuiteSparse_config_backslash.mk} (71%)
 copy SuiteSparse_config/{SuiteSparse_config.mk => SuiteSparse_config_linux.mk} (71%)
 copy {CSparse/MATLAB/UFget => UFget}/Contents.m (100%)
 copy {CSparse/MATLAB/UFget => UFget}/Makefile (100%)
 copy {CSparse/MATLAB/UFget => UFget}/README.txt (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFget.m (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFget_defaults.m (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFget_example.m (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFget_lookup.m (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFgrep.m (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFgui.jar (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFgui.java (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFhelp.html (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFkinds.m (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFsettings.txt (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFsvd.m (100%)
 copy {CSparse/MATLAB/UFget => UFget}/UFweb.m (100%)
 create mode 100644 UFget/mat/UF_Index.mat
 copy {CSparse/MATLAB/UFget => UFget}/matrices/UFstats.csv (100%)

-- 
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