[suitesparse] branch master updated (be96a67 -> bb1737e)
Sébastien Villemot
sebastien at debian.org
Sat Jan 17 21:10:06 UTC 2015
This is an automated email from the git hooks/post-receive script.
sebastien pushed a change to branch master
in repository suitesparse.
from be96a67 debian/control: update homepage URL.
new 9a6bfc2 Improvement to debian/watch.
adds 67ac24f Imported Upstream version 4.4.2
new fce2c70 Merge tag 'upstream/4.4.2'
new bb1737e debian/copyright: update, rewrite using machine-readable format 1.0.
The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
AMD/Demo/Makefile | 11 +-
AMD/Demo/amd_demo.out | 6 +-
AMD/Demo/amd_demo2.out | 4 +-
AMD/Demo/amd_l_demo.out | 6 +-
AMD/Doc/AMD_UserGuide.pdf | Bin 256147 -> 271996 bytes
AMD/Doc/AMD_UserGuide.tex | 4 +-
AMD/Doc/ChangeLog | 10 +-
AMD/Include/amd.h | 19 +-
AMD/Include/amd_internal.h | 31 +-
AMD/Lib/GNUmakefile | 5 +-
AMD/Lib/Makefile | 3 +-
AMD/MATLAB/amd_make.m | 16 +-
AMD/MATLAB/amd_mex.c | 6 -
AMD/Makefile | 2 +-
AMD/README.txt | 2 +-
AMD/Source/amd_control.c | 13 +-
AMD/Source/amd_global.c | 75 +-
AMD/Source/amd_info.c | 20 +-
AMD/Source/amd_order.c | 40 +-
BTF/Doc/ChangeLog | 4 +
BTF/Include/btf.h | 4 +-
BTF/MATLAB/btf_make.m | 5 +
BTF/Makefile | 2 +-
CAMD/Demo/Makefile | 11 +-
CAMD/Demo/camd_demo.out | 7 +-
CAMD/Demo/camd_demo2.out | 5 +-
CAMD/Demo/camd_l_demo.out | 7 +-
CAMD/Doc/CAMD_UserGuide.pdf | Bin 249742 -> 265441 bytes
CAMD/Doc/CAMD_UserGuide.tex | 4 +-
CAMD/Doc/ChangeLog | 10 +-
CAMD/Include/camd.h | 19 +-
CAMD/Include/camd_internal.h | 35 +-
CAMD/Lib/GNUmakefile | 5 +-
CAMD/Lib/Makefile | 3 +-
CAMD/MATLAB/camd_make.m | 16 +-
CAMD/MATLAB/camd_mex.c | 6 -
CAMD/Makefile | 4 +-
CAMD/README.txt | 2 +-
CAMD/Source/camd_control.c | 13 +-
CAMD/Source/camd_global.c | 75 +-
CAMD/Source/camd_info.c | 23 +-
CAMD/Source/camd_order.c | 40 +-
CCOLAMD/Demo/Makefile | 7 +-
CCOLAMD/Demo/ccolamd_example.out | 4 +-
CCOLAMD/Demo/ccolamd_l_example.out | 4 +-
CCOLAMD/Doc/ChangeLog | 8 +
CCOLAMD/Include/ccolamd.h | 12 +-
CCOLAMD/Lib/Makefile | 5 +-
CCOLAMD/MATLAB/ccolamd_make.m | 20 +-
CCOLAMD/MATLAB/ccolamd_test.m | 6 +-
CCOLAMD/Makefile | 2 +-
CCOLAMD/README.txt | 2 +-
CCOLAMD/Source/ccolamd.c | 95 +-
CCOLAMD/Source/ccolamd_global.c | 16 +-
CHOLMOD/Check/cholmod_check.c | 23 +-
CHOLMOD/Cholesky/cholmod_amd.c | 11 -
CHOLMOD/Cholesky/cholmod_analyze.c | 10 +-
CHOLMOD/Cholesky/cholmod_colamd.c | 3 -
CHOLMOD/Cholesky/cholmod_rowfac.c | 40 +-
CHOLMOD/Cholesky/cholmod_solve.c | 3 -
CHOLMOD/Cholesky/t_cholmod_rowfac.c | 6 +-
CHOLMOD/Core/cholmod_common.c | 136 +-
CHOLMOD/Core/cholmod_complex.c | 67 +-
CHOLMOD/Core/cholmod_dense.c | 15 -
CHOLMOD/Core/cholmod_error.c | 8 +-
CHOLMOD/Core/cholmod_factor.c | 1 +
CHOLMOD/Core/cholmod_memory.c | 55 +-
CHOLMOD/Demo/Makefile | 6 +-
CHOLMOD/Demo/cholmod_demo.c | 5 +
CHOLMOD/Demo/cholmod_demo.h | 1 +
CHOLMOD/Demo/cholmod_l_demo.c | 136 +-
CHOLMOD/Demo/gpu.sh | 4 +
CHOLMOD/Doc/ChangeLog | 39 +
...2014_Workshop_Rennich_Stosic_Davis_preprint.pdf | Bin 0 -> 1553980 bytes
CHOLMOD/Doc/UserGuide.pdf | Bin 552769 -> 562847 bytes
CHOLMOD/Doc/UserGuide.tex | 164 +-
CHOLMOD/GPU/cholmod_gpu.c | 479 +
CHOLMOD/GPU/cholmod_gpu_kernels.c | 6 +
CHOLMOD/GPU/cholmod_gpu_kernels.cu | 196 +
CHOLMOD/GPU/t_cholmod_gpu.c | 1397 +
CHOLMOD/Include/cholmod.h | 5 +
CHOLMOD/Include/cholmod_cholesky.h | 26 +-
CHOLMOD/Include/cholmod_complexity.h | 7 +-
CHOLMOD/Include/cholmod_core.h | 277 +-
CHOLMOD/Include/cholmod_function.h | 155 +
CHOLMOD/Include/cholmod_gpu.h | 80 +
CHOLMOD/Include/cholmod_gpu_kernels.h | 50 +
CHOLMOD/Include/cholmod_internal.h | 35 +-
CHOLMOD/Include/cholmod_modify.h | 21 +
CHOLMOD/Include/cholmod_supernodal.h | 8 +-
CHOLMOD/Include/cholmod_template.h | 7 +
CHOLMOD/Lib/Makefile | 35 +-
CHOLMOD/MATLAB/Test/test3.m | 31 +-
CHOLMOD/MATLAB/cholmod_make.m | 11 +-
CHOLMOD/MATLAB/cholmod_matlab.c | 18 +-
CHOLMOD/MATLAB/ldlchol.c | 2 +-
CHOLMOD/MATLAB/mread.c | 2 +-
CHOLMOD/Makefile | 2 +-
CHOLMOD/MatrixOps/cholmod_norm.c | 4 +-
CHOLMOD/Modify/cholmod_updown.c | 39 +-
CHOLMOD/Modify/t_cholmod_updown.c | 3 +-
CHOLMOD/Partition/cholmod_camd.c | 11 -
CHOLMOD/Partition/cholmod_csymamd.c | 13 +-
CHOLMOD/README.txt | 2 +-
CHOLMOD/Supernodal/cholmod_super_numeric.c | 18 +-
CHOLMOD/Supernodal/cholmod_super_symbolic.c | 162 +-
CHOLMOD/Supernodal/t_cholmod_gpu.c | 972 -
CHOLMOD/Supernodal/t_cholmod_super_numeric.c | 1324 +-
CHOLMOD/Tcov/Makefile | 407 +-
CHOLMOD/Tcov/Matrix/C9840 | 30502 +++
CHOLMOD/Tcov/amdtest.c | 10 +-
CHOLMOD/Tcov/camdtest.c | 10 +-
CHOLMOD/Tcov/cctest.c | 64 +-
CHOLMOD/Tcov/cm.c | 76 +-
CHOLMOD/Tcov/cm.h | 1 +
CHOLMOD/Tcov/ctest.c | 69 +-
CHOLMOD/Tcov/go | 15 +
CHOLMOD/Tcov/memory.c | 21 +-
CHOLMOD/Tcov/null2.c | 3 +
COLAMD/Demo/Makefile | 7 +-
COLAMD/Demo/colamd_example.out | 4 +-
COLAMD/Demo/colamd_l_example.out | 4 +-
COLAMD/Doc/ChangeLog | 8 +
COLAMD/Include/colamd.h | 12 +-
COLAMD/Lib/Makefile | 5 +-
COLAMD/MATLAB/colamd_make.m | 20 +-
COLAMD/MATLAB/colamd_test.m | 6 +-
COLAMD/MATLAB/colamdmex.c | 2 -
COLAMD/MATLAB/colamdtestmex.c | 2 -
COLAMD/MATLAB/symamdmex.c | 2 -
COLAMD/MATLAB/symamdtestmex.c | 2 -
COLAMD/Makefile | 2 +-
COLAMD/README.txt | 2 +-
COLAMD/Source/colamd.c | 95 +-
COLAMD/Source/colamd_global.c | 16 +-
CSparse/Demo/cs_demo.out | 44 +-
CSparse/Doc/ChangeLog | 8 +
CSparse/Include/cs.h | 6 +-
CSparse/MATLAB/CSparse/cs_make.m | 5 +
CSparse/MATLAB/UFget/mat/UF_Index.mat | Bin 95255 -> 117643 bytes
CSparse/MATLAB/cs_install.m | 20 +-
CSparse/Makefile | 2 +-
CSparse/README.txt | 2 +-
CXSparse/Demo/cs_demo.out | 372 +-
CXSparse/Doc/ChangeLog | 8 +
CXSparse/Include/cs.h | 6 +-
CXSparse/MATLAB/CSparse/private/cs_make_helper.m | 5 +
CXSparse/MATLAB/UFget/mat/UF_Index.mat | Bin 95255 -> 117643 bytes
CXSparse/MATLAB/cs_install.m | 20 +-
CXSparse/Makefile | 2 +-
CXSparse_newfiles.tar.gz | Bin 577677 -> 0 bytes
CXSparse_newfiles/Include/cs.h | 6 +-
.../MATLAB/CSparse/private/cs_make_helper.m | 5 +
CXSparse_newfiles/MATLAB/cs_install.m | 20 +-
CXSparse_newfiles/Makefile | 2 +-
ChangeLog | 483 +
Contents.m | 2 +-
GPUQREngine/Demo/Makefile | 40 +
GPUQREngine/Demo/README.txt | 12 +
GPUQREngine/Demo/gpuqrengine_demo.cpp | 337 +
GPUQREngine/Doc/ChangeLog | 3 +
{CHOLMOD/Demo => GPUQREngine/Doc}/gpl.txt | 0
GPUQREngine/Include/GPUQREngine.hpp | 58 +
GPUQREngine/Include/GPUQREngine_BucketList.hpp | 168 +
GPUQREngine/Include/GPUQREngine_Common.hpp | 82 +
GPUQREngine/Include/GPUQREngine_Front.hpp | 167 +
GPUQREngine/Include/GPUQREngine_FrontState.hpp | 30 +
GPUQREngine/Include/GPUQREngine_GraphVizHelper.hpp | 19 +
GPUQREngine/Include/GPUQREngine_Internal.hpp | 37 +
GPUQREngine/Include/GPUQREngine_LLBundle.hpp | 96 +
GPUQREngine/Include/GPUQREngine_SEntry.hpp | 25 +
GPUQREngine/Include/GPUQREngine_Scheduler.hpp | 168 +
GPUQREngine/Include/GPUQREngine_SparseMeta.hpp | 82 +
GPUQREngine/Include/GPUQREngine_Stats.hpp | 31 +
GPUQREngine/Include/GPUQREngine_TaskDescriptor.hpp | 117 +
GPUQREngine/Include/GPUQREngine_Timing.hpp | 46 +
GPUQREngine/Include/Kernel/Apply/block_apply.cu | 219 +
GPUQREngine/Include/Kernel/Apply/block_apply_1.cu | 12 +
.../Include/Kernel/Apply/block_apply_1_by_1.cu | 12 +
GPUQREngine/Include/Kernel/Apply/block_apply_2.cu | 12 +
.../Include/Kernel/Apply/block_apply_2_by_1.cu | 12 +
GPUQREngine/Include/Kernel/Apply/block_apply_3.cu | 12 +
.../Include/Kernel/Apply/block_apply_3_by_1.cu | 12 +
.../Include/Kernel/Apply/block_apply_chunk.cu | 529 +
GPUQREngine/Include/Kernel/Apply/cevta_tile.cu | 152 +
GPUQREngine/Include/Kernel/Apply/params_apply.hpp | 63 +
.../Include/Kernel/Apply/pipelined_rearrange.cu | 195 +
.../Include/Kernel/Assemble/packAssemble.cu | 57 +
GPUQREngine/Include/Kernel/Assemble/sAssemble.cu | 19 +
.../Include/Kernel/Factorize/factorize_3_by_1.cu | 14 +
.../Include/Kernel/Factorize/factorize_vt.cu | 568 +
.../Kernel/Factorize/factorize_vt_1_by_1.cu | 14 +
.../Kernel/Factorize/factorize_vt_1_by_1_edge.cu | 15 +
.../Kernel/Factorize/factorize_vt_2_by_1.cu | 14 +
.../Kernel/Factorize/factorize_vt_2_by_1_edge.cu | 15 +
.../Kernel/Factorize/factorize_vt_3_by_1.cu | 14 +
.../Kernel/Factorize/factorize_vt_3_by_1_edge.cu | 15 +
GPUQREngine/Include/Kernel/qrKernel.cu | 74 +
GPUQREngine/Include/Kernel/sharedMemory.hpp | 51 +
GPUQREngine/Include/Kernel/uberKernel.cu | 45 +
GPUQREngine/Lib/Makefile | 204 +
GPUQREngine/Makefile | 41 +
GPUQREngine/README.txt | 36 +
GPUQREngine/Source/BucketList/BucketList.cpp | 129 +
.../BucketList/BucketList_AdvanceBundles.cpp | 41 +
.../Source/BucketList/BucketList_CreateBundles.cpp | 108 +
.../Source/BucketList/BucketList_FillWorkQueue.cpp | 198 +
.../Source/BucketList/BucketList_GrowBundles.cpp | 70 +
.../Source/BucketList/BucketList_Manage.cpp | 90 +
.../BucketList/BucketList_PostProcessing.cpp | 44 +
GPUQREngine/Source/GPUQREngine_ExpertDense.cpp | 217 +
GPUQREngine/Source/GPUQREngine_ExpertSparse.cpp | 30 +
GPUQREngine/Source/GPUQREngine_GraphVizHelper.cpp | 216 +
GPUQREngine/Source/GPUQREngine_Internal.cpp | 88 +
GPUQREngine/Source/GPUQREngine_UberKernel.cu | 30 +
GPUQREngine/Source/LLBundle/LLBundle.cpp | 35 +
GPUQREngine/Source/LLBundle/LLBundle_AddTiles.cpp | 114 +
GPUQREngine/Source/LLBundle/LLBundle_Advance.cpp | 80 +
GPUQREngine/Source/LLBundle/LLBundle_GPUPack.cpp | 56 +
.../LLBundle/LLBundle_PipelinedRearrange.cpp | 106 +
.../LLBundle/LLBundle_UpdateSecondMinIndex.cpp | 50 +
GPUQREngine/Source/Scheduler/Scheduler.cpp | 254 +
.../Source/Scheduler/Scheduler_FillWorkQueue.cpp | 463 +
GPUQREngine/Source/Scheduler/Scheduler_Front.cpp | 209 +
.../Source/Scheduler/Scheduler_LaunchKernel.cpp | 63 +
.../Source/Scheduler/Scheduler_PostProcess.cpp | 241 +
GPUQREngine/Source/Scheduler/Scheduler_Render.cpp | 96 +
.../Source/Scheduler/Scheduler_TransferData.cpp | 59 +
.../Source/Scheduler/ssgpu_maxQueueSize.cpp | 28 +
.../Source/TaskDescriptor/TaskDescriptor_flops.cpp | 140 +
KLU/Demo/Makefile | 13 +-
KLU/Demo/kludemo.out | 24 +-
KLU/Doc/ChangeLog | 15 +
KLU/Doc/KLU_UserGuide.pdf | Bin 291746 -> 314130 bytes
KLU/Doc/KLU_UserGuide.tex | 2 +-
KLU/Include/klu.h | 16 +-
KLU/Include/klu_internal.h | 2 +-
KLU/MATLAB/klu_make.m | 27 +-
KLU/MATLAB/klu_mex.c | 6 -
KLU/Makefile | 2 +-
KLU/README.txt | 2 +-
KLU/Source/klu_analyze.c | 6 -
KLU/Source/klu_defaults.c | 6 -
KLU/Source/klu_diagnostics.c | 10 +-
KLU/Source/klu_factor.c | 2 -
KLU/Source/klu_kernel.c | 1 +
KLU/Source/klu_memory.c | 35 +-
KLU/Source/klu_refactor.c | 10 +-
KLU/Tcov/Makefile | 6 +-
KLU/Tcov/klutest.c | 43 +-
KLU/User/klu_cholmod.c | 6 -
KLU/User/klu_l_cholmod.c | 6 -
LDL/Demo/Makefile | 15 +-
LDL/Demo/ldlamd.out | 96 +-
LDL/Demo/ldllamd.out | 96 +-
LDL/Doc/ChangeLog | 8 +
LDL/Doc/ldl_userguide.pdf | Bin 242255 -> 242255 bytes
LDL/Doc/ldl_userguide.tex | 2 +-
LDL/Include/ldl.h | 6 +-
LDL/MATLAB/ldl_make.m | 6 +
LDL/MATLAB/ldlmain2.m | 9 +-
LDL/Makefile | 2 +-
LDL/README.txt | 6 +-
MATLAB_Tools/SFMULT/sfmult.c | 10 +-
MATLAB_Tools/SFMULT/sfmult.h | 2 +-
MATLAB_Tools/SFMULT/sfmult_anxnyt_k.c | 36 +-
MATLAB_Tools/SFMULT/sfmult_anxtyt.c | 6 +-
MATLAB_Tools/SFMULT/sfmult_anxtyt_k.c | 36 +-
MATLAB_Tools/SFMULT/sfmult_atxtyn_k.c | 36 +-
MATLAB_Tools/SFMULT/sfmult_atxtyt_k.c | 36 +-
MATLAB_Tools/SFMULT/sfmult_mex.c | 2 +-
MATLAB_Tools/SFMULT/sfmult_vector_1.c | 20 +-
MATLAB_Tools/SFMULT/sfmult_vector_k.c | 20 +-
MATLAB_Tools/SFMULT/sfmult_xA.c | 12 +-
MATLAB_Tools/SFMULT/ssmult_transpose.c | 2 +-
MATLAB_Tools/SSMULT/ChangeLog | 4 +
MATLAB_Tools/SSMULT/ssmult_install.m | 5 +
MATLAB_Tools/UFcollection/UFindex.m | 12 +
MATLAB_Tools/UFcollection/UFlist.m | 2 +-
MATLAB_Tools/UFcollection/UFpage.m | 2 +-
MATLAB_Tools/UFcollection/UFstats.m | 64 +-
MATLAB_Tools/sparseinv/sparseinv.m | 4 +-
MATLAB_Tools/spok/private/spok_invalid.c | 12 +-
MATLAB_Tools/spok/spok.h | 18 +
MATLAB_Tools/spqr_rank/SJget/mat/SJ_Index.mat | Bin 67979 -> 67976 bytes
.../spqr_rank/save_samples_demo_spqr_rank.mat | Bin 21492 -> 21524 bytes
Makefile | 171 +-
RBio/Demo/RBdemo.c | 88 +-
RBio/Doc/ChangeLog | 8 +
RBio/Include/RBio.h | 32 +-
RBio/Makefile | 2 +-
RBio/RBio/RBmake.m | 5 +
RBio/RBio/RBraw.c | 6 +-
RBio/RBio/RBread.c | 9 +-
RBio/RBio/RBtype.c | 8 +-
RBio/RBio/RBwrite.c | 10 +-
RBio/README.txt | 2 +-
RBio/Source/RBio.c | 105 +-
RBio/Tcov/RBtest.c | 76 +-
README.txt | 12 +-
SPQR/Demo/Makefile | 113 +-
SPQR/Demo/README.txt | 11 +-
SPQR/Demo/demo_colamd.sh | 1 +
SPQR/Demo/demo_colamd2.sh | 1 +
SPQR/Demo/demo_colamd3.sh | 1 +
SPQR/Demo/demo_metis.sh | 1 +
SPQR/Demo/demo_metis2.sh | 1 +
SPQR/Demo/demo_metis3.sh | 1 +
SPQR/Demo/go4.m | 225 +
SPQR/Demo/go5.m | 254 +
SPQR/Demo/qrdemo.cpp | 24 +-
SPQR/Demo/qrdemo_diary.txt | 56 -
SPQR/Demo/qrdemo_gpu.cpp | 144 +
SPQR/Demo/qrdemo_gpu2.cpp | 106 +
SPQR/Demo/qrdemo_gpu3.cpp | 106 +
SPQR/Demo/qrdemo_out.txt | 155 +-
SPQR/Demo/qrdemoc_out.txt | 2 +
SPQR/Demo/spqr_gpu.m | 81 +
SPQR/Demo/spqr_gpu2.m | 76 +
SPQR/Demo/spqr_gpu3.m | 76 +
SPQR/Doc/ChangeLog | 14 +
SPQR/Doc/README.txt | 7 +-
SPQR/Doc/qrgpu_paper.pdf | Bin 0 -> 783763 bytes
SPQR/Doc/spqr_user_guide.pdf | Bin 196787 -> 226386 bytes
SPQR/Doc/spqr_user_guide.tex | 58 +-
SPQR/Include/SuiteSparseQR.hpp | 57 +-
SPQR/Include/SuiteSparseQR_definitions.h | 8 +-
SPQR/Include/spqr.hpp | 24 +-
SPQR/Include/spqrgpu.hpp | 81 +
SPQR/Lib/Makefile | 30 +-
SPQR/MATLAB/spqr.cpp | 2 +-
SPQR/MATLAB/spqr_make.m | 12 +
SPQR/MATLAB/spqr_mx.cpp | 41 +-
SPQR/MATLAB/spqr_qmult.cpp | 3 -
SPQR/MATLAB/spqr_solve.cpp | 4 +-
SPQR/Makefile | 2 +-
SPQR/Matrix/Franz6_id1959_aug.mtx | 48477 +++++
SPQR/Matrix/Groebner_id2003_aug.mtx | 173678 ++++++++++++++++++
SPQR/Matrix/lp_e226.mtx | 2834 +
SPQR/Matrix/lp_e226_transposed.mtx | 2770 +
SPQR/README.txt | 9 +-
SPQR/SPQRGPU/spqrgpu_buildAssemblyMaps.cpp | 191 +
SPQR/SPQRGPU/spqrgpu_computeFrontStaging.cpp | 231 +
SPQR/SPQRGPU/spqrgpu_kernel.cpp | 737 +
SPQR/Source/SuiteSparseQR.cpp | 41 +-
SPQR/Source/SuiteSparseQR_expert.cpp | 33 +-
SPQR/Source/SuiteSparseQR_qmult.cpp | 5 +-
SPQR/Source/spqr_1colamd.cpp | 19 +-
SPQR/Source/spqr_1factor.cpp | 22 +-
SPQR/Source/spqr_analyze.cpp | 306 +-
SPQR/Source/spqr_debug.cpp | 78 +-
SPQR/Source/spqr_factorize.cpp | 42 +-
SPQR/Source/spqr_freesym.cpp | 24 +
SPQR/Source/spqr_front.cpp | 6 +-
SPQR/Source/spqr_fsize.cpp | 13 +-
SPQR/Source/spqr_happly.cpp | 4 +-
SPQR/Source/spqr_kernel.cpp | 16 +-
SPQR/Source/spqr_parallel.cpp | 1 +
SPQR/Source/spqr_rconvert.cpp | 45 +-
SPQR/Source/spqr_rcount.cpp | 8 +-
SPQR/Source/spqr_rsolve.cpp | 5 +-
SPQR/Tcov/Makefile | 388 +-
SPQR/Tcov/cov | 20 +-
SPQR/Tcov/make_output.txt | 32 -
SPQR/Tcov/matrix1.txt | 2 +-
SPQR/Tcov/matrixlist.txt | 3 +-
SPQR/Tcov/qrtest.cpp | 197 +-
SuiteSparse_GPURuntime/Doc/ChangeLog | 3 +
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.../Include/SuiteSparseGPU_Runtime.hpp | 32 +
.../Include/SuiteSparseGPU_Workspace.hpp | 110 +
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SuiteSparse_GPURuntime/Lib/Makefile | 51 +
SuiteSparse_GPURuntime/Makefile | 40 +
SuiteSparse_GPURuntime/README.txt | 28 +
.../Source/SuiteSparseGPU_Workspace.cpp | 153 +
.../SuiteSparseGPU_Workspace_cpuAllocators.cpp | 129 +
.../SuiteSparseGPU_Workspace_gpuAllocators.cpp | 93 +
.../Source/SuiteSparseGPU_Workspace_transfer.cpp | 60 +
SuiteSparse_config/Makefile | 7 +-
SuiteSparse_config/README.txt | 43 +-
SuiteSparse_config/SuiteSparse_config.c | 392 +-
SuiteSparse_config/SuiteSparse_config.h | 125 +-
SuiteSparse_config/SuiteSparse_config.mk | 167 +-
...nfig_GPU.mk => SuiteSparse_config_GPU_debug.mk} | 167 +-
...config_GPU.mk => SuiteSparse_config_GPU_gcc.mk} | 165 +-
...config_GPU.mk => SuiteSparse_config_GPU_icc.mk} | 169 +-
...nfig_GPU.mk => SuiteSparse_config_GPU_icc10.mk} | 170 +-
SuiteSparse_config/SuiteSparse_config_Mac.mk | 171 +-
...e_config.mk => SuiteSparse_config_backslash.mk} | 167 +-
...parse_config.mk => SuiteSparse_config_linux.mk} | 167 +-
SuiteSparse_install.m | 25 +-
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UMFPACK/Demo/Makefile | 4 +-
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UMFPACK/Demo/umfpack_zi_demo.c | 6 +
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UMFPACK/Demo/umfpack_zl_demo.c | 7 +
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UMFPACK/Doc/ChangeLog | 9 +
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UMFPACK/Source/umf_config.h | 2 +-
UMFPACK/Source/umf_free.c | 3 +-
UMFPACK/Source/umf_internal.h | 10 +-
UMFPACK/Source/umf_malloc.c | 15 +-
UMFPACK/Source/umf_realloc.c | 3 +-
UMFPACK/Source/umf_version.h | 8 +-
UMFPACK/Source/umfpack_global.c | 121 +-
UMFPACK/Tcov/AMD_Demo_Makefile | 10 +-
UMFPACK/Tcov/Demo_Makefile | 2 +-
UMFPACK/Tcov/Make.1 | 2 +-
UMFPACK/Tcov/Make.2 | 2 +-
UMFPACK/Tcov/Make.3 | 2 +-
UMFPACK/Tcov/Make.4 | 2 +-
UMFPACK/Tcov/Make.5 | 2 +-
UMFPACK/Tcov/Make.6 | 2 +-
UMFPACK/Tcov/Make.7 | 2 +-
UMFPACK/Tcov/Make.8 | 2 +-
UMFPACK/Tcov/ut.c | 16 +-
debian/copyright | 200 +-
debian/watch | 3 +-
452 files changed, 278145 insertions(+), 5039 deletions(-)
create mode 100755 CHOLMOD/Demo/gpu.sh
create mode 100644 CHOLMOD/Doc/IA3_2014_Workshop_Rennich_Stosic_Davis_preprint.pdf
create mode 100644 CHOLMOD/GPU/cholmod_gpu.c
create mode 100644 CHOLMOD/GPU/cholmod_gpu_kernels.c
create mode 100644 CHOLMOD/GPU/cholmod_gpu_kernels.cu
create mode 100644 CHOLMOD/GPU/t_cholmod_gpu.c
create mode 100644 CHOLMOD/Include/cholmod_function.h
create mode 100644 CHOLMOD/Include/cholmod_gpu.h
create mode 100644 CHOLMOD/Include/cholmod_gpu_kernels.h
delete mode 100644 CHOLMOD/Supernodal/t_cholmod_gpu.c
create mode 100644 CHOLMOD/Tcov/Matrix/C9840
create mode 100755 CHOLMOD/Tcov/go
delete mode 100644 CXSparse_newfiles.tar.gz
create mode 100644 ChangeLog
create mode 100644 GPUQREngine/Demo/Makefile
create mode 100644 GPUQREngine/Demo/README.txt
create mode 100644 GPUQREngine/Demo/gpuqrengine_demo.cpp
create mode 100644 GPUQREngine/Doc/ChangeLog
copy {CHOLMOD/Demo => GPUQREngine/Doc}/gpl.txt (100%)
create mode 100644 GPUQREngine/Include/GPUQREngine.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_BucketList.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_Common.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_Front.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_FrontState.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_GraphVizHelper.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_Internal.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_LLBundle.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_SEntry.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_Scheduler.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_SparseMeta.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_Stats.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_TaskDescriptor.hpp
create mode 100644 GPUQREngine/Include/GPUQREngine_Timing.hpp
create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply.cu
create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_1.cu
create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_1_by_1.cu
create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_2.cu
create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_2_by_1.cu
create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_3.cu
create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_3_by_1.cu
create mode 100644 GPUQREngine/Include/Kernel/Apply/block_apply_chunk.cu
create mode 100644 GPUQREngine/Include/Kernel/Apply/cevta_tile.cu
create mode 100644 GPUQREngine/Include/Kernel/Apply/params_apply.hpp
create mode 100644 GPUQREngine/Include/Kernel/Apply/pipelined_rearrange.cu
create mode 100644 GPUQREngine/Include/Kernel/Assemble/packAssemble.cu
create mode 100644 GPUQREngine/Include/Kernel/Assemble/sAssemble.cu
create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_3_by_1.cu
create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt.cu
create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_1_by_1.cu
create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_1_by_1_edge.cu
create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_2_by_1.cu
create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_2_by_1_edge.cu
create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_3_by_1.cu
create mode 100644 GPUQREngine/Include/Kernel/Factorize/factorize_vt_3_by_1_edge.cu
create mode 100644 GPUQREngine/Include/Kernel/qrKernel.cu
create mode 100644 GPUQREngine/Include/Kernel/sharedMemory.hpp
create mode 100644 GPUQREngine/Include/Kernel/uberKernel.cu
create mode 100644 GPUQREngine/Lib/Makefile
create mode 100644 GPUQREngine/Makefile
create mode 100644 GPUQREngine/README.txt
create mode 100644 GPUQREngine/Source/BucketList/BucketList.cpp
create mode 100644 GPUQREngine/Source/BucketList/BucketList_AdvanceBundles.cpp
create mode 100644 GPUQREngine/Source/BucketList/BucketList_CreateBundles.cpp
create mode 100644 GPUQREngine/Source/BucketList/BucketList_FillWorkQueue.cpp
create mode 100644 GPUQREngine/Source/BucketList/BucketList_GrowBundles.cpp
create mode 100644 GPUQREngine/Source/BucketList/BucketList_Manage.cpp
create mode 100644 GPUQREngine/Source/BucketList/BucketList_PostProcessing.cpp
create mode 100644 GPUQREngine/Source/GPUQREngine_ExpertDense.cpp
create mode 100644 GPUQREngine/Source/GPUQREngine_ExpertSparse.cpp
create mode 100644 GPUQREngine/Source/GPUQREngine_GraphVizHelper.cpp
create mode 100644 GPUQREngine/Source/GPUQREngine_Internal.cpp
create mode 100644 GPUQREngine/Source/GPUQREngine_UberKernel.cu
create mode 100644 GPUQREngine/Source/LLBundle/LLBundle.cpp
create mode 100644 GPUQREngine/Source/LLBundle/LLBundle_AddTiles.cpp
create mode 100644 GPUQREngine/Source/LLBundle/LLBundle_Advance.cpp
create mode 100644 GPUQREngine/Source/LLBundle/LLBundle_GPUPack.cpp
create mode 100644 GPUQREngine/Source/LLBundle/LLBundle_PipelinedRearrange.cpp
create mode 100644 GPUQREngine/Source/LLBundle/LLBundle_UpdateSecondMinIndex.cpp
create mode 100644 GPUQREngine/Source/Scheduler/Scheduler.cpp
create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_FillWorkQueue.cpp
create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_Front.cpp
create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_LaunchKernel.cpp
create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_PostProcess.cpp
create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_Render.cpp
create mode 100644 GPUQREngine/Source/Scheduler/Scheduler_TransferData.cpp
create mode 100644 GPUQREngine/Source/Scheduler/ssgpu_maxQueueSize.cpp
create mode 100644 GPUQREngine/Source/TaskDescriptor/TaskDescriptor_flops.cpp
create mode 100644 SPQR/Demo/demo_colamd.sh
create mode 100644 SPQR/Demo/demo_colamd2.sh
create mode 100644 SPQR/Demo/demo_colamd3.sh
create mode 100644 SPQR/Demo/demo_metis.sh
create mode 100644 SPQR/Demo/demo_metis2.sh
create mode 100644 SPQR/Demo/demo_metis3.sh
create mode 100644 SPQR/Demo/go4.m
create mode 100644 SPQR/Demo/go5.m
delete mode 100644 SPQR/Demo/qrdemo_diary.txt
create mode 100644 SPQR/Demo/qrdemo_gpu.cpp
create mode 100644 SPQR/Demo/qrdemo_gpu2.cpp
create mode 100644 SPQR/Demo/qrdemo_gpu3.cpp
create mode 100644 SPQR/Demo/spqr_gpu.m
create mode 100644 SPQR/Demo/spqr_gpu2.m
create mode 100644 SPQR/Demo/spqr_gpu3.m
create mode 100644 SPQR/Doc/qrgpu_paper.pdf
create mode 100644 SPQR/Include/spqrgpu.hpp
create mode 100644 SPQR/Matrix/Franz6_id1959_aug.mtx
create mode 100644 SPQR/Matrix/Groebner_id2003_aug.mtx
create mode 100644 SPQR/Matrix/lp_e226.mtx
create mode 100644 SPQR/Matrix/lp_e226_transposed.mtx
create mode 100644 SPQR/SPQRGPU/spqrgpu_buildAssemblyMaps.cpp
create mode 100644 SPQR/SPQRGPU/spqrgpu_computeFrontStaging.cpp
create mode 100644 SPQR/SPQRGPU/spqrgpu_kernel.cpp
delete mode 100644 SPQR/Tcov/make_output.txt
create mode 100644 SuiteSparse_GPURuntime/Doc/ChangeLog
copy {CHOLMOD/Demo => SuiteSparse_GPURuntime/Doc}/gpl.txt (100%)
create mode 100644 SuiteSparse_GPURuntime/Include/SuiteSparseGPU_Runtime.hpp
create mode 100644 SuiteSparse_GPURuntime/Include/SuiteSparseGPU_Workspace.hpp
create mode 100644 SuiteSparse_GPURuntime/Include/SuiteSparseGPU_debug.hpp
create mode 100644 SuiteSparse_GPURuntime/Include/SuiteSparseGPU_macros.hpp
create mode 100644 SuiteSparse_GPURuntime/Include/SuiteSparseGPU_workspace_macros.hpp
create mode 100644 SuiteSparse_GPURuntime/Lib/Makefile
create mode 100644 SuiteSparse_GPURuntime/Makefile
create mode 100644 SuiteSparse_GPURuntime/README.txt
create mode 100644 SuiteSparse_GPURuntime/Source/SuiteSparseGPU_Workspace.cpp
create mode 100644 SuiteSparse_GPURuntime/Source/SuiteSparseGPU_Workspace_cpuAllocators.cpp
create mode 100644 SuiteSparse_GPURuntime/Source/SuiteSparseGPU_Workspace_gpuAllocators.cpp
create mode 100644 SuiteSparse_GPURuntime/Source/SuiteSparseGPU_Workspace_transfer.cpp
copy SuiteSparse_config/{SuiteSparse_config_GPU.mk => SuiteSparse_config_GPU_debug.mk} (71%)
copy SuiteSparse_config/{SuiteSparse_config_GPU.mk => SuiteSparse_config_GPU_gcc.mk} (71%)
copy SuiteSparse_config/{SuiteSparse_config_GPU.mk => SuiteSparse_config_GPU_icc.mk} (71%)
rename SuiteSparse_config/{SuiteSparse_config_GPU.mk => SuiteSparse_config_GPU_icc10.mk} (71%)
copy SuiteSparse_config/{SuiteSparse_config.mk => SuiteSparse_config_backslash.mk} (71%)
copy SuiteSparse_config/{SuiteSparse_config.mk => SuiteSparse_config_linux.mk} (71%)
copy {CSparse/MATLAB/UFget => UFget}/Contents.m (100%)
copy {CSparse/MATLAB/UFget => UFget}/Makefile (100%)
copy {CSparse/MATLAB/UFget => UFget}/README.txt (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFget.m (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFget_defaults.m (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFget_example.m (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFget_lookup.m (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFgrep.m (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFgui.jar (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFgui.java (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFhelp.html (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFkinds.m (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFsettings.txt (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFsvd.m (100%)
copy {CSparse/MATLAB/UFget => UFget}/UFweb.m (100%)
create mode 100644 UFget/mat/UF_Index.mat
copy {CSparse/MATLAB/UFget => UFget}/matrices/UFstats.csv (100%)
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