[apophenia] branch master updated (337c2d8 -> 7dd8d77)
Jerome Benoit
calculus-guest at moszumanska.debian.org
Fri Jul 10 23:16:01 UTC 2015
This is an automated email from the git hooks/post-receive script.
calculus-guest pushed a change to branch master
in repository apophenia.
from 337c2d8 move to experimental for avoiding the freeze
new c24faa5 Imported Debian pre-patch 0.999e+ds-1
adds 41a93e0 Imported Upstream version 0.999e
new e0fdb84 Merge tag 'upstream/0.999e'
adds 2666914 Imported Upstream version 0.999e+ds
new 9e450cc Merge tag 'upstream/0.999e+ds'
new 7dd8d77 Imported Debian patch 0.999e+ds-1
The 4 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
COPYING2 | 13 -
INSTALL | 370 +++
Makefile.am | 13 +-
README | 2 +-
apop.h => apop.h.in | 1085 ++++---
apop_arms.c | 18 +-
apop_asst.c | 143 +-
apop_bootstrap.c | 65 +-
apop_conversions.c | 400 +--
apop_data.c | 515 ++--
apop_db.c | 221 +-
apop_db_mysql.c | 8 +-
apop_db_sqlite.c | 61 +-
apop_fexact.c | 7 +-
apop_hist.c | 153 +-
apop_internal.h | 2 +-
apop_linear_algebra.c | 212 +-
apop_linear_constraint.c | 17 +-
apop_mapply.c | 159 +-
apop_mcmc.c | 89 +-
apop_missing_data.c | 16 +-
apop_mle.c | 141 +-
apop_model.c | 237 +-
apop_name.c | 63 +-
apop_output.c | 119 +-
apop_rake.c | 88 +-
apop_regression.c | 253 +-
apop_settings.c | 4 +-
apop_smoothing.c | 23 -
apop_sort.c | 21 +-
apop_stats.c | 544 ++--
apop_tests.c | 106 +-
apop_update.c | 64 +-
apop_vtables.c | 2 +
apophenia.map | 36 +-
cmd/apop_db_to_crosstab.c | 21 +-
cmd/apop_plot_query.c | 4 +-
cmd/apop_text_to_db.c | 2 +-
configure.ac | 22 +-
debian/adhoc/images/structs.png | Bin 80016 -> 0 bytes
debian/apophenia-doc.docs | 2 +-
debian/apophenia-doc.links | 1 +
debian/changelog | 20 +
debian/clean | 18 -
debian/control | 21 +-
debian/copyright | 59 +-
debian/libapophenia1.symbols | 325 --
...enia1-dev.install => libapophenia2-dev.install} | 0
...libapophenia1.install => libapophenia2.install} | 0
debian/libapophenia2.symbols | 325 ++
debian/patches/debianization-adhoc.patch | 27 +-
...ianization-bug-597187_757967-mysql_config.patch | 8 +-
debian/patches/debianization-documentation.patch | 19 +-
debian/patches/debianization.patch | 60 +-
debian/patches/series | 2 -
.../upstream-update-docs_doxygen_conf_in.patch | 3239 --------------------
.../patches/upstream-update-library_version.patch | 28 -
debian/repack | 156 -
debian/rules | 32 +-
debian/watch | 5 +-
docs/Makefile.am | 40 +-
docs/adjust | 75 +
docs/documentation.h | 2570 +++++++++-------
docs/doxygen.conf.in | 2469 +++++++++------
docs/edit_group.sed | 27 +-
docs/foot.html | 3 +-
docs/head.html | 59 +-
docs/make_model_doc.awk | 64 +-
docs/structs.dot | 133 +
docs/typical.css | 3 +
eg/Makefile.am | 4 +-
eg/apop_map_row.c | 2 +-
eg/banana.c | 10 +-
eg/binning.c | 19 +-
eg/boot_clt.c | 31 +
eg/cross_models.c | 55 +-
eg/data_fill.c | 24 +
eg/db_fns.c | 34 +-
eg/dconstrain.c | 19 +-
eg/dot_products.c | 11 +-
eg/draw_to_db.c | 8 +-
eg/entropy_model.c | 31 +
eg/entropy_vector.c | 52 +
eg/f_test.c | 39 +
eg/faithful.c | 7 +-
eg/fake_logit.c | 12 +-
eg/fix_params.c | 16 +-
eg/hills2.c | 13 +-
eg/iv.c | 27 +-
eg/jack.c | 17 +
eg/jacobian.c | 17 +-
eg/kernel.c | 8 +-
eg/ks_tests.c | 14 +-
eg/logit.c | 28 +
eg/ml_imputation.c | 46 +
eg/normalization_demo.c | 27 +
eg/normalizations.c | 29 -
eg/ols.c | 10 +-
eg/ols2.c | 11 +-
eg/ols_oneliner.c | 8 +
eg/parameterization.c | 10 +-
eg/pmf_test.c | 6 +-
eg/scatter.c | 22 -
eg/simple_subsets.c | 24 +-
eg/some_cdfs.c | 4 +-
eg/sql_to_html.c | 9 +-
eg/stack_models.c | 47 -
eg/t_test_by_rows.c | 12 +-
eg/test_distances.c | 19 +-
eg/test_fisher.c | 2 +-
eg/test_pruning.c | 5 +-
eg/test_regex.c | 2 +-
eg/test_updating.c | 13 +-
eg/text_demo.c | 6 +-
eg/transform.c | 30 +
model/Makefile.am | 2 +-
model/apop_bernoulli.c | 14 +-
model/apop_beta.c | 13 +-
model/apop_dirichlet.c | 4 +-
model/apop_exponential.c | 11 +-
model/apop_gamma.c | 15 +-
model/{apop_histogram.c => apop_kerneld.c} | 44 +-
model/apop_loess.c | 26 +-
model/apop_multinomial.c | 34 +-
model/apop_multivariate_normal.c | 19 +-
model/apop_normal.c | 79 +-
model/apop_ols.c | 120 +-
model/apop_pmf.c | 67 +-
model/apop_poisson.c | 13 +-
model/apop_probit.c | 38 +-
model/apop_t.c | 46 +-
model/apop_uniform.c | 10 +-
model/apop_wishart.c | 22 +-
model/apop_yule.c | 14 +-
model/apop_zipf.c | 16 +-
tests/Makefile.am | 54 +-
tests/db_tests.c | 20 +-
tests/distribution_tests.c | 12 +-
tests/factors.c | 28 +
tests/lognormal_test.c | 39 +
tests/sort_example.c | 10 +-
tests/test_apop.c | 206 +-
tests/test_kernel_ll.c | 2 +-
tests/update_via_rng.c | 4 -
transform/Makefile.am | 1 -
transform/apop_coordinate_transform.c | 37 +-
transform/apop_cross.c | 69 +-
transform/apop_dcompose.c | 116 -
transform/apop_dconstrain.c | 8 +-
transform/apop_fix_params.c | 24 +-
transform/apop_mixture.c | 25 +-
transform/apop_stack.c | 144 -
152 files changed, 7704 insertions(+), 9651 deletions(-)
delete mode 100644 COPYING2
create mode 100644 INSTALL
rename apop.h => apop.h.in (76%)
delete mode 100644 apop_smoothing.c
delete mode 100644 debian/adhoc/images/structs.png
delete mode 100644 debian/clean
delete mode 100644 debian/libapophenia1.symbols
rename debian/{libapophenia1-dev.install => libapophenia2-dev.install} (100%)
rename debian/{libapophenia1.install => libapophenia2.install} (100%)
create mode 100644 debian/libapophenia2.symbols
delete mode 100644 debian/patches/upstream-update-docs_doxygen_conf_in.patch
delete mode 100644 debian/patches/upstream-update-library_version.patch
delete mode 100755 debian/repack
create mode 100755 docs/adjust
create mode 100644 docs/structs.dot
create mode 100644 eg/boot_clt.c
create mode 100644 eg/data_fill.c
create mode 100644 eg/entropy_model.c
create mode 100644 eg/entropy_vector.c
create mode 100644 eg/f_test.c
create mode 100644 eg/jack.c
create mode 100644 eg/logit.c
create mode 100644 eg/ml_imputation.c
create mode 100644 eg/normalization_demo.c
delete mode 100644 eg/normalizations.c
create mode 100644 eg/ols_oneliner.c
delete mode 100644 eg/scatter.c
delete mode 100644 eg/stack_models.c
create mode 100644 eg/transform.c
rename model/{apop_histogram.c => apop_kerneld.c} (82%)
create mode 100644 tests/factors.c
create mode 100644 tests/lognormal_test.c
delete mode 100644 transform/apop_dcompose.c
delete mode 100644 transform/apop_stack.c
--
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