[apophenia] 04/04: Imported Debian patch 0.999e+ds-1

Jerome Benoit calculus-guest at moszumanska.debian.org
Fri Jul 10 23:16:01 UTC 2015


This is an automated email from the git hooks/post-receive script.

calculus-guest pushed a commit to branch master
in repository apophenia.

commit 7dd8d77d339b246fe5ab00a5977731077b8c29eb
Author: Jerome Benoit <calculus at rezozer.net>
Date:   Fri Jul 10 19:20:27 2015 +0200

    Imported Debian patch 0.999e+ds-1
---
 debian/adhoc/images/structs.png                    |  Bin 80016 -> 0 bytes
 debian/apophenia-doc.docs                          |    2 +-
 debian/apophenia-doc.links                         |    1 +
 debian/changelog                                   |   13 +-
 debian/clean                                       |   18 -
 debian/control                                     |   21 +-
 debian/libapophenia1.symbols                       |  325 --
 ...enia1-dev.install => libapophenia2-dev.install} |    0
 ...libapophenia1.install => libapophenia2.install} |    0
 debian/libapophenia2.symbols                       |  325 ++
 debian/patches/debianization-adhoc.patch           |   27 +-
 ...ianization-bug-597187_757967-mysql_config.patch |    8 +-
 debian/patches/debianization-documentation.patch   |   19 +-
 debian/patches/debianization.patch                 |   60 +-
 debian/patches/series                              |    2 -
 .../upstream-update-docs_doxygen_conf_in.patch     | 3239 --------------------
 .../patches/upstream-update-library_version.patch  |   28 -
 debian/rules                                       |   30 +-
 18 files changed, 412 insertions(+), 3706 deletions(-)

diff --git a/debian/adhoc/images/structs.png b/debian/adhoc/images/structs.png
deleted file mode 100644
index d2e246c..0000000
Binary files a/debian/adhoc/images/structs.png and /dev/null differ
diff --git a/debian/apophenia-doc.docs b/debian/apophenia-doc.docs
index a8ae8ed..ff91425 100644
--- a/debian/apophenia-doc.docs
+++ b/debian/apophenia-doc.docs
@@ -1 +1 @@
-docs/html
+_build/docs/html
diff --git a/debian/apophenia-doc.links b/debian/apophenia-doc.links
index 5685f23..2d16614 100644
--- a/debian/apophenia-doc.links
+++ b/debian/apophenia-doc.links
@@ -1,2 +1,3 @@
+usr/share/javascript/jquery/jquery.js usr/share/doc/apophenia-doc/html/jquery.js
 usr/share/doc/apophenia-doc/examples/build.sh usr/share/doc/apophenia-doc/examples/clean.sh
 usr/share/doc/apophenia-doc/examples usr/share/doc/apophenia-doc/eg
diff --git a/debian/changelog b/debian/changelog
index 7b85657..d5c540c 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,5 +1,6 @@
-apophenia (0.999e+ds-1) UNRELEASED; urgency=medium
+apophenia (0.999e+ds-1) unstable; urgency=medium
 
+  * Uploads to unstable.
   * New upstream version (Closes: #777772, #781566).
   * Debianization:
     - debian/copyright:
@@ -7,9 +8,15 @@ apophenia (0.999e+ds-1) UNRELEASED; urgency=medium
         script debian/repack;
       - update;
     - debian/repack, discard (see above);
-    - debian/watch, revisit (see above).
+    - debian/watch, revisit (see above);
+    - debian/patches/debianization-documentation.patch, render the build
+      reproducible by removing $date (Closes: #788868);
+    - debian/patches/debianization-bug-597187_757967-mysql_config.patch, harden;
+    - debian/patches/upstream-*.patch, remove since they were integrated;
+    - debian/rules, clean up;
+    - debian/clean, drop off.
 
- -- Jerome Benoit <calculus at rezozer.net>  Thu, 02 Jul 2015 23:19:11 +0000
+ -- Jerome Benoit <calculus at rezozer.net>  Fri, 10 Jul 2015 19:11:33 +0000
 
 apophenia (0.999c+ds-1) experimental; urgency=medium
 
diff --git a/debian/clean b/debian/clean
deleted file mode 100644
index fcb6a3c..0000000
--- a/debian/clean
+++ /dev/null
@@ -1,18 +0,0 @@
-cmd/apop_db_to_crosstab.1
-cmd/apop_plot_query.1
-cmd/apop_text_to_db.1
-tests/ff.db
-tests/runs.db
-tests/td.db
-tests/draws-k
-tests/draws-k2
-tests/draws-mvN
-tests/draws-N
-tests/draws-std_multinormal
-tests/draws-std_normal
-tests/the_data.txt
-tests/print_test.out
-tests/xxx
-docs/model_doc.h
-docs/doxygen_sqlite3.db
-docs/missing_model_parts
diff --git a/debian/control b/debian/control
index 0be35d2..9b570d9 100644
--- a/debian/control
+++ b/debian/control
@@ -10,6 +10,7 @@ Build-Depends:
  zlib1g-dev, libmysqlclient-dev, libsqlite3-dev, libgsl0-dev,
  bc, sqlite3
 Build-Depends-Indep:
+ graphviz,
  doxygen, texlive-latex-recommended, texlive-fonts-recommended, ghostscript,
  rdfind, symlinks
 Standards-Version: 3.9.6
@@ -17,7 +18,7 @@ Homepage: http://apophenia.info/
 Vcs-Git: git://anonscm.debian.org/debian-science/packages/apophenia.git
 Vcs-Browser: http://anonscm.debian.org/gitweb/?p=debian-science/packages/apophenia.git
 
-Package: libapophenia1
+Package: libapophenia2
 Provides: libapophenia
 Section: libs
 Architecture: any
@@ -45,13 +46,13 @@ Description: Apophenia Statistical C Library -- library package
  .
  This package provides the shared libraries required to run programs
  compiled against the Apophenia Statistical C Library. To compile your
- own programs you also need to install the libapophenia1-dev package.
+ own programs you also need to install the libapophenia2-dev package.
 
-Package: libapophenia1-dev
+Package: libapophenia2-dev
 Provides: libapophenia-dev
 Section: libdevel
 Architecture: any
-Depends: libapophenia1 (= ${binary:Version}), ${misc:Depends}
+Depends: libapophenia2 (= ${binary:Version}), ${misc:Depends}
 Conflicts: libapophenia-dev
 Suggests: pkg-config
 Multi-Arch: same
@@ -78,7 +79,7 @@ Description: Apophenia Statistical C Library -- development package
 
 Package: apophenia-bin
 Architecture: any
-Depends: libapophenia1 (= ${binary:Version}), ${shlibs:Depends}, ${misc:Depends}
+Depends: libapophenia2 (= ${binary:Version}), ${shlibs:Depends}, ${misc:Depends}
 Suggests: sqlite3
 Multi-Arch: foreign
 Description: Apophenia Statistical C Library -- binary package
@@ -100,12 +101,12 @@ Description: Apophenia Statistical C Library -- binary package
  .
  This package provides several command line utility examples.
 
-Package: libapophenia1-dbg
+Package: libapophenia2-dbg
 Provides: libapophenia-dbg
 Section: debug
 Priority: extra
 Architecture: any
-Depends: libapophenia1 (= ${binary:Version}), ${misc:Depends}
+Depends: libapophenia2 (= ${binary:Version}), ${misc:Depends}
 Conflicts: libapophenia-dbg
 Multi-Arch: same
 Description: Apophenia Statistical C Library -- debug symbols package
@@ -126,14 +127,14 @@ Description: Apophenia Statistical C Library -- debug symbols package
  GNU General Public License version 2 (GPL2) with two modifications.
  .
  This package provides the debugging symbols for the libraries from
- the libapophenia1-dev package.
+ the libapophenia2-dev package.
 
 Package: apophenia-doc
 Section: doc
 Architecture: all
-Depends: ${misc:Depends}
+Depends: libjs-jquery, ${misc:Depends}
 Suggests:
- libapophenia1 (= ${binary:Version}), libapophenia1-dev (= ${binary:Version}),
+ libapophenia2 (= ${binary:Version}), libapophenia2-dev (= ${binary:Version}),
 # pdf-viewer,
  www-browser,
  gsl-doc-pdf, gsl-ref-html
diff --git a/debian/libapophenia1.symbols b/debian/libapophenia1.symbols
deleted file mode 100644
index 985a070..0000000
--- a/debian/libapophenia1.symbols
+++ /dev/null
@@ -1,325 +0,0 @@
-libapophenia.so.1 libapophenia1 #MINVER#
- LIBAPOPHENIA_1.0.0 at LIBAPOPHENIA_1.0.0 0.999c
- apop_anova_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_arms_draw at LIBAPOPHENIA_1.0.0 0.999c
- apop_arms_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_arms_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_arms_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_array_to_vector_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_bernoulli at LIBAPOPHENIA_1.0.0 0.999c
- apop_beta at LIBAPOPHENIA_1.0.0 0.999c
- apop_beta_from_mean_var at LIBAPOPHENIA_1.0.0 0.999c
- apop_binomial at LIBAPOPHENIA_1.0.0 0.999c
- apop_bootstrap_cov_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_cdf at LIBAPOPHENIA_1.0.0 0.999c
- apop_cdf_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_cdf_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_cdf_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_composition at LIBAPOPHENIA_1.0.0 0.999c
- apop_composition_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_composition_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_composition_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_coordinate_transform at LIBAPOPHENIA_1.0.0 0.999c
- apop_cross at LIBAPOPHENIA_1.0.0 0.999c
- apop_cross_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_cross_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_cross_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_crosstab_to_db at LIBAPOPHENIA_1.0.0 0.999c
- apop_ct_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_ct_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_ct_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_add_named_elmt at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_add_names_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_add_page at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_alloc_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_calloc_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_correlation at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_covariance at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_fill_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_free_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_get_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_get_factor_names_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_get_page_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_listwise_delete_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_memcpy at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_pack_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_pmf_compress at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_print_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_prune_columns_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_ptr_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_rank_compress at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_rank_expand at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_rm_columns at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_rm_page_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_rm_rows_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_set_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_set_row at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_show at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_sort_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_split at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_stack_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_summarize at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_to_bins_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_to_db at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_to_dummies_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_to_factors_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_transpose_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_data_unpack_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_db_close_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_db_open at LIBAPOPHENIA_1.0.0 0.999c
- apop_db_to_crosstab at LIBAPOPHENIA_1.0.0 0.999c
- apop_dconstrain at LIBAPOPHENIA_1.0.0 0.999c
- apop_dconstrain_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_dconstrain_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_dconstrain_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_det_and_inv at LIBAPOPHENIA_1.0.0 0.999c
- apop_dirichlet at LIBAPOPHENIA_1.0.0 0.999c
- apop_dot_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_draw at LIBAPOPHENIA_1.0.0 0.999c
- apop_estimate at LIBAPOPHENIA_1.0.0 0.999c
- apop_estimate_coefficient_of_determination at LIBAPOPHENIA_1.0.0 0.999c
- apop_estimate_parameter_tests at LIBAPOPHENIA_1.0.0 0.999c
- apop_estimate_restart_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_exponential at LIBAPOPHENIA_1.0.0 0.999c
- apop_f_test_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_gamma at LIBAPOPHENIA_1.0.0 0.999c
- apop_generalized_harmonic at LIBAPOPHENIA_1.0.0 0.999c
- apop_histograms_test_goodness_of_fit at LIBAPOPHENIA_1.0.0 0.999c
- apop_improper_uniform at LIBAPOPHENIA_1.0.0 0.999c
- apop_iv at LIBAPOPHENIA_1.0.0 0.999c
- apop_jackknife_cov at LIBAPOPHENIA_1.0.0 0.999c
- apop_kernel_density at LIBAPOPHENIA_1.0.0 0.999c
- apop_kernel_density_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_kernel_density_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_kernel_density_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_kl_divergence_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_linear_constraint_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_lm_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_lm_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_lm_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_loess at LIBAPOPHENIA_1.0.0 0.999c
- apop_loess_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_loess_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_loess_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_log_likelihood at LIBAPOPHENIA_1.0.0 0.999c
- apop_logit at LIBAPOPHENIA_1.0.0 0.999c
- apop_lognormal at LIBAPOPHENIA_1.0.0 0.999c
- apop_map_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_map_sum_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_apply at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_apply_all at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_determinant at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_inverse at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_is_positive_semidefinite_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_map at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_map_all at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_map_all_sum at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_map_sum at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_mean at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_mean_and_var at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_normalize at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_pca_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_print_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_realloc at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_rm_columns at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_show at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_stack_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_sum at LIBAPOPHENIA_1.0.0 0.999c
- apop_matrix_to_positive_semidefinite at LIBAPOPHENIA_1.0.0 0.999c
- apop_maximum_likelihood at LIBAPOPHENIA_1.0.0 0.999c
- apop_mcmc_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_mcmc_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_mcmc_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_mixture at LIBAPOPHENIA_1.0.0 0.999c
- apop_mixture_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_mixture_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_mixture_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_ml_impute at LIBAPOPHENIA_1.0.0 0.999c
- apop_mle_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_mle_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_mle_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_clear at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_cross_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_draws_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_fix_params at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_fix_params_get_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_hessian_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_metropolis_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_mixture_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_numerical_covariance_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_print at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_print_type_check at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_set_parameters_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_show at LIBAPOPHENIA_1.0.0 0.999c
- apop_model_to_pmf_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_multinomial at LIBAPOPHENIA_1.0.0 0.999c
- apop_multivariate_gamma at LIBAPOPHENIA_1.0.0 0.999c
- apop_multivariate_lngamma at LIBAPOPHENIA_1.0.0 0.999c
- apop_multivariate_normal at LIBAPOPHENIA_1.0.0 0.999c
- apop_name_add at LIBAPOPHENIA_1.0.0 0.999c
- apop_name_alloc at LIBAPOPHENIA_1.0.0 0.999c
- apop_name_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_name_find at LIBAPOPHENIA_1.0.0 0.999c
- apop_name_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_name_print at LIBAPOPHENIA_1.0.0 0.999c
- apop_name_stack_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_normal at LIBAPOPHENIA_1.0.0 0.999c
- apop_numerical_gradient_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_ols at LIBAPOPHENIA_1.0.0 0.999c
- apop_opts at LIBAPOPHENIA_1.0.0 0.999c
- apop_p at LIBAPOPHENIA_1.0.0 0.999c
- apop_paired_t_test at LIBAPOPHENIA_1.0.0 0.999c
- apop_parameter_model at LIBAPOPHENIA_1.0.0 0.999c
- apop_parameter_model_type_check at LIBAPOPHENIA_1.0.0 0.999c
- apop_parts_wanted_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_parts_wanted_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_parts_wanted_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_pm_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_pm_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_pm_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_pmf at LIBAPOPHENIA_1.0.0 0.999c
- apop_pmf_settings_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_pmf_settings_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_pmf_settings_init at LIBAPOPHENIA_1.0.0 0.999c
- apop_poisson at LIBAPOPHENIA_1.0.0 0.999c
- apop_predict at LIBAPOPHENIA_1.0.0 0.999c
- apop_predict_type_check at LIBAPOPHENIA_1.0.0 0.999c
- apop_prep at LIBAPOPHENIA_1.0.0 0.999c
- apop_probit at LIBAPOPHENIA_1.0.0 0.999c
- apop_query at LIBAPOPHENIA_1.0.0 0.999c
- apop_query_to_data at LIBAPOPHENIA_1.0.0 0.999c
- apop_query_to_float at LIBAPOPHENIA_1.0.0 0.999c
- apop_query_to_matrix at LIBAPOPHENIA_1.0.0 0.999c
- apop_query_to_mixed_data at LIBAPOPHENIA_1.0.0 0.999c
- apop_query_to_text at LIBAPOPHENIA_1.0.0 0.999c
- apop_query_to_vector at LIBAPOPHENIA_1.0.0 0.999c
- apop_rake_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_regex_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_rng_GHgB3 at LIBAPOPHENIA_1.0.0 0.999c
- apop_rng_alloc at LIBAPOPHENIA_1.0.0 0.999c
- apop_rng_get_thread_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_score at LIBAPOPHENIA_1.0.0 0.999c
- apop_score_type_check at LIBAPOPHENIA_1.0.0 0.999c
- apop_settings_copy_group at LIBAPOPHENIA_1.0.0 0.999c
- apop_settings_get_grp at LIBAPOPHENIA_1.0.0 0.999c
- apop_settings_group_alloc at LIBAPOPHENIA_1.0.0 0.999c
- apop_settings_group_alloc_wm at LIBAPOPHENIA_1.0.0 0.999c
- apop_settings_remove_group at LIBAPOPHENIA_1.0.0 0.999c
- apop_system at LIBAPOPHENIA_1.0.0 0.999c
- apop_t_distribution at LIBAPOPHENIA_1.0.0 0.999c
- apop_t_test at LIBAPOPHENIA_1.0.0 0.999c
- apop_table_exists_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_test_anova_independence at LIBAPOPHENIA_1.0.0 0.999c
- apop_test_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_test_fisher_exact at LIBAPOPHENIA_1.0.0 0.999c
- apop_test_kolmogorov at LIBAPOPHENIA_1.0.0 0.999c
- apop_text_add at LIBAPOPHENIA_1.0.0 0.999c
- apop_text_alloc at LIBAPOPHENIA_1.0.0 0.999c
- apop_text_fill_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_text_free at LIBAPOPHENIA_1.0.0 0.999c
- apop_text_paste_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_text_to_data_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_text_to_db_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_text_unique_elements at LIBAPOPHENIA_1.0.0 0.999c
- apop_uniform at LIBAPOPHENIA_1.0.0 0.999c
- apop_update_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_update_type_check at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_apply at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_bounded_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_copy at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_correlation at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_cov_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_distance_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_exp at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_fill_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_kurtosis at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_kurtosis_pop_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_log10 at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_log at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_map at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_map_sum at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_mean_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_moving_average at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_normalize_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_percentiles_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_print_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_realloc at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_show at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_skew at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_skew_pop_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_stack_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_sum at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_to_matrix_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_unique_elements at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_var_base at LIBAPOPHENIA_1.0.0 0.999c
- apop_vector_var_m at LIBAPOPHENIA_1.0.0 0.999c
- apop_vtable_add at LIBAPOPHENIA_1.0.0 0.999c
- apop_vtable_drop at LIBAPOPHENIA_1.0.0 0.999c
- apop_vtable_get at LIBAPOPHENIA_1.0.0 0.999c
- apop_yule at LIBAPOPHENIA_1.0.0 0.999c
- apop_zipf at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_anova at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_array_to_vector at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_bootstrap_cov at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_alloc at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_calloc at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_get at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_get_factor_names at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_get_page at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_listwise_delete at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_pack at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_print at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_ptr at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_rm_page at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_rm_rows at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_set at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_sort at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_stack at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_to_bins at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_to_dummies at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_to_factors at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_transpose at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_data_unpack at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_db_close at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_dot at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_estimate_restart at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_f_test at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_kl_divergence at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_linear_constraint at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_map at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_map_sum at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_matrix_is_positive_semidefinite at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_matrix_pca at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_matrix_print at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_matrix_stack at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_model_draws at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_model_hessian at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_model_metropolis at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_model_numerical_covariance at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_model_to_pmf at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_name_stack at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_numerical_gradient at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_rake at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_regex at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_table_exists at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_test at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_text_paste at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_text_to_data at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_text_to_db at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_update at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_bounded at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_cov at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_distance at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_kurtosis_pop at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_mean at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_normalize at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_percentiles at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_print at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_skew_pop at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_stack at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_to_matrix at LIBAPOPHENIA_1.0.0 0.999c
- variadic_apop_vector_var at LIBAPOPHENIA_1.0.0 0.999c
diff --git a/debian/libapophenia1-dev.install b/debian/libapophenia2-dev.install
similarity index 100%
rename from debian/libapophenia1-dev.install
rename to debian/libapophenia2-dev.install
diff --git a/debian/libapophenia1.install b/debian/libapophenia2.install
similarity index 100%
rename from debian/libapophenia1.install
rename to debian/libapophenia2.install
diff --git a/debian/libapophenia2.symbols b/debian/libapophenia2.symbols
new file mode 100644
index 0000000..a3d9598
--- /dev/null
+++ b/debian/libapophenia2.symbols
@@ -0,0 +1,325 @@
+libapophenia.so.2 libapophenia2 #MINVER#
+ LIBAPOPHENIA_2.0.0 at LIBAPOPHENIA_2.0.0 0.999e
+ apop_anova_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_arms_draw at LIBAPOPHENIA_2.0.0 0.999e
+ apop_arms_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_arms_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_arms_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_array_to_vector_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_bernoulli at LIBAPOPHENIA_2.0.0 0.999e
+ apop_beta at LIBAPOPHENIA_2.0.0 0.999e
+ apop_beta_from_mean_var at LIBAPOPHENIA_2.0.0 0.999e
+ apop_binomial at LIBAPOPHENIA_2.0.0 0.999e
+ apop_bootstrap_cov_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_cdf at LIBAPOPHENIA_2.0.0 0.999e
+ apop_cdf_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_cdf_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_cdf_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_coordinate_transform at LIBAPOPHENIA_2.0.0 0.999e
+ apop_coordinate_transform_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_coordinate_transform_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_coordinate_transform_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_cross at LIBAPOPHENIA_2.0.0 0.999e
+ apop_cross_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_cross_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_cross_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_crosstab_to_db at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_add_named_elmt at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_add_names_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_add_page at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_alloc_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_calloc_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_correlation at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_covariance at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_fill_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_free_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_get_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_get_factor_names_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_get_page_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_listwise_delete_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_memcpy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_pack_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_pmf_compress at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_print_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_prune_columns_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_ptr_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_rank_compress_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_rank_expand at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_rm_columns at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_rm_page_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_rm_rows_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_set_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_show at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_sort_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_split at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_stack_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_summarize at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_to_bins_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_to_db at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_to_dummies_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_to_factors_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_transpose_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_data_unpack_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_db_close_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_db_open at LIBAPOPHENIA_2.0.0 0.999e
+ apop_db_to_crosstab_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_dconstrain at LIBAPOPHENIA_2.0.0 0.999e
+ apop_dconstrain_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_dconstrain_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_dconstrain_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_det_and_inv at LIBAPOPHENIA_2.0.0 0.999e
+ apop_dirichlet at LIBAPOPHENIA_2.0.0 0.999e
+ apop_dot_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_draw at LIBAPOPHENIA_2.0.0 0.999e
+ apop_entropy_type_check at LIBAPOPHENIA_2.0.0 0.999e
+ apop_estimate at LIBAPOPHENIA_2.0.0 0.999e
+ apop_estimate_coefficient_of_determination at LIBAPOPHENIA_2.0.0 0.999e
+ apop_estimate_parameter_tests at LIBAPOPHENIA_2.0.0 0.999e
+ apop_estimate_restart_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_exponential at LIBAPOPHENIA_2.0.0 0.999e
+ apop_f_test_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_gamma at LIBAPOPHENIA_2.0.0 0.999e
+ apop_generalized_harmonic at LIBAPOPHENIA_2.0.0 0.999e
+ apop_histograms_test_goodness_of_fit at LIBAPOPHENIA_2.0.0 0.999e
+ apop_improper_uniform at LIBAPOPHENIA_2.0.0 0.999e
+ apop_iv at LIBAPOPHENIA_2.0.0 0.999e
+ apop_jackknife_cov at LIBAPOPHENIA_2.0.0 0.999e
+ apop_kernel_density at LIBAPOPHENIA_2.0.0 0.999e
+ apop_kernel_density_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_kernel_density_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_kernel_density_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_kl_divergence_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_linear_constraint_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_lm_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_lm_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_lm_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_loess at LIBAPOPHENIA_2.0.0 0.999e
+ apop_loess_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_loess_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_loess_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_log_likelihood at LIBAPOPHENIA_2.0.0 0.999e
+ apop_logit at LIBAPOPHENIA_2.0.0 0.999e
+ apop_lognormal at LIBAPOPHENIA_2.0.0 0.999e
+ apop_map_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_map_sum_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_apply at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_apply_all at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_determinant at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_inverse at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_is_positive_semidefinite_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_map at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_map_all at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_map_all_sum at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_map_sum at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_mean at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_mean_and_var at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_pca_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_print_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_realloc at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_show at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_stack_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_sum at LIBAPOPHENIA_2.0.0 0.999e
+ apop_matrix_to_positive_semidefinite at LIBAPOPHENIA_2.0.0 0.999e
+ apop_maximum_likelihood at LIBAPOPHENIA_2.0.0 0.999e
+ apop_mcmc_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_mcmc_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_mcmc_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_mixture at LIBAPOPHENIA_2.0.0 0.999e
+ apop_mixture_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_mixture_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_mixture_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_ml_impute at LIBAPOPHENIA_2.0.0 0.999e
+ apop_mle_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_mle_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_mle_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_clear at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_cross_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_draws_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_entropy_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_fix_params at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_fix_params_get_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_hessian_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_metropolis_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_mixture_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_numerical_covariance_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_print_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_print_type_check at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_set_parameters_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_show at LIBAPOPHENIA_2.0.0 0.999e
+ apop_model_to_pmf_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_multinomial at LIBAPOPHENIA_2.0.0 0.999e
+ apop_multivariate_gamma at LIBAPOPHENIA_2.0.0 0.999e
+ apop_multivariate_lngamma at LIBAPOPHENIA_2.0.0 0.999e
+ apop_multivariate_normal at LIBAPOPHENIA_2.0.0 0.999e
+ apop_name_add at LIBAPOPHENIA_2.0.0 0.999e
+ apop_name_alloc at LIBAPOPHENIA_2.0.0 0.999e
+ apop_name_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_name_find at LIBAPOPHENIA_2.0.0 0.999e
+ apop_name_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_name_print at LIBAPOPHENIA_2.0.0 0.999e
+ apop_name_stack_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_normal at LIBAPOPHENIA_2.0.0 0.999e
+ apop_numerical_gradient_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_ols at LIBAPOPHENIA_2.0.0 0.999e
+ apop_opts at LIBAPOPHENIA_2.0.0 0.999e
+ apop_p at LIBAPOPHENIA_2.0.0 0.999e
+ apop_paired_t_test at LIBAPOPHENIA_2.0.0 0.999e
+ apop_parameter_model at LIBAPOPHENIA_2.0.0 0.999e
+ apop_parameter_model_type_check at LIBAPOPHENIA_2.0.0 0.999e
+ apop_parts_wanted_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_parts_wanted_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_parts_wanted_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_pm_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_pm_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_pm_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_pmf at LIBAPOPHENIA_2.0.0 0.999e
+ apop_pmf_settings_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_pmf_settings_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_pmf_settings_init at LIBAPOPHENIA_2.0.0 0.999e
+ apop_poisson at LIBAPOPHENIA_2.0.0 0.999e
+ apop_predict at LIBAPOPHENIA_2.0.0 0.999e
+ apop_predict_type_check at LIBAPOPHENIA_2.0.0 0.999e
+ apop_prep at LIBAPOPHENIA_2.0.0 0.999e
+ apop_probit at LIBAPOPHENIA_2.0.0 0.999e
+ apop_query at LIBAPOPHENIA_2.0.0 0.999e
+ apop_query_to_data at LIBAPOPHENIA_2.0.0 0.999e
+ apop_query_to_float at LIBAPOPHENIA_2.0.0 0.999e
+ apop_query_to_mixed_data at LIBAPOPHENIA_2.0.0 0.999e
+ apop_query_to_text at LIBAPOPHENIA_2.0.0 0.999e
+ apop_query_to_vector at LIBAPOPHENIA_2.0.0 0.999e
+ apop_rake_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_regex_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_rng_GHgB3 at LIBAPOPHENIA_2.0.0 0.999e
+ apop_rng_alloc at LIBAPOPHENIA_2.0.0 0.999e
+ apop_rng_get_thread_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_score at LIBAPOPHENIA_2.0.0 0.999e
+ apop_score_type_check at LIBAPOPHENIA_2.0.0 0.999e
+ apop_settings_copy_group at LIBAPOPHENIA_2.0.0 0.999e
+ apop_settings_get_grp at LIBAPOPHENIA_2.0.0 0.999e
+ apop_settings_group_alloc at LIBAPOPHENIA_2.0.0 0.999e
+ apop_settings_group_alloc_wm at LIBAPOPHENIA_2.0.0 0.999e
+ apop_settings_remove_group at LIBAPOPHENIA_2.0.0 0.999e
+ apop_system at LIBAPOPHENIA_2.0.0 0.999e
+ apop_t_distribution at LIBAPOPHENIA_2.0.0 0.999e
+ apop_t_test at LIBAPOPHENIA_2.0.0 0.999e
+ apop_table_exists_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_test_anova_independence at LIBAPOPHENIA_2.0.0 0.999e
+ apop_test_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_test_fisher_exact at LIBAPOPHENIA_2.0.0 0.999e
+ apop_test_kolmogorov at LIBAPOPHENIA_2.0.0 0.999e
+ apop_text_alloc at LIBAPOPHENIA_2.0.0 0.999e
+ apop_text_fill_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_text_free at LIBAPOPHENIA_2.0.0 0.999e
+ apop_text_paste_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_text_set at LIBAPOPHENIA_2.0.0 0.999e
+ apop_text_to_data_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_text_to_db_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_text_unique_elements at LIBAPOPHENIA_2.0.0 0.999e
+ apop_uniform at LIBAPOPHENIA_2.0.0 0.999e
+ apop_update_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_update_type_check at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_apply at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_bounded_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_copy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_correlation_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_cov_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_distance_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_entropy at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_exp at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_fill_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_kurtosis at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_kurtosis_pop_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_log10 at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_log at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_map at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_map_sum at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_mean_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_moving_average at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_normalize_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_percentiles_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_print_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_realloc at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_show at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_skew at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_skew_pop_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_stack_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_sum at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_to_matrix_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_unique_elements at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_var_base at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vector_var_m at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vtable_add at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vtable_drop at LIBAPOPHENIA_2.0.0 0.999e
+ apop_vtable_get at LIBAPOPHENIA_2.0.0 0.999e
+ apop_yule at LIBAPOPHENIA_2.0.0 0.999e
+ apop_zipf at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_anova at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_array_to_vector at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_bootstrap_cov at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_alloc at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_calloc at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_get at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_get_factor_names at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_get_page at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_listwise_delete at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_pack at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_print at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_ptr at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_rank_compress at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_rm_page at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_rm_rows at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_set at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_sort at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_stack at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_to_bins at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_to_dummies at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_to_factors at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_transpose at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_data_unpack at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_db_close at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_db_to_crosstab at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_dot at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_estimate_restart at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_f_test at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_kl_divergence at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_linear_constraint at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_map at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_map_sum at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_matrix_is_positive_semidefinite at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_matrix_pca at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_matrix_print at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_matrix_stack at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_model_draws at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_model_entropy at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_model_hessian at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_model_metropolis at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_model_numerical_covariance at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_model_print at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_model_to_pmf at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_name_stack at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_numerical_gradient at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_rake at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_regex at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_table_exists at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_test at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_text_paste at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_text_to_data at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_text_to_db at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_update at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_bounded at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_correlation at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_cov at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_distance at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_kurtosis_pop at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_mean at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_normalize at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_percentiles at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_print at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_skew_pop at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_stack at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_to_matrix at LIBAPOPHENIA_2.0.0 0.999e
+ variadic_apop_vector_var at LIBAPOPHENIA_2.0.0 0.999e
diff --git a/debian/patches/debianization-adhoc.patch b/debian/patches/debianization-adhoc.patch
index d23fff2..ed071f8 100644
--- a/debian/patches/debianization-adhoc.patch
+++ b/debian/patches/debianization-adhoc.patch
@@ -5,27 +5,18 @@ Description: debianization -- ad hoc
  has been reported to the upstream maintainer.
 Origin: debian
 Author: Jerome Benoit <calculus at rezozer.net>
-Last-Update: 2014-09-08
+Last-Update: 2015-07-08
 
---- a/docs/Makefile.am
-+++ b/docs/Makefile.am
-@@ -31,6 +31,7 @@
- doc: documentation.h model_doc.h $(apophenia_IMAGES) $(apophenia_JS)
- 	doxygen doxygen.conf
- 	cp $(apophenia_IMAGES) $(apophenia_JS) html/
-+	cp $(top_srcdir)/debian/adhoc/images/structs.png html/
- 	sed -i -f edit_outline.sed html/index.html html/outline.html
- 	sed -i -f edit_globals.sed html/globals.html
- 	sed -i -f edit_group.sed html/group__models.html
 --- a/docs/documentation.h
 +++ b/docs/documentation.h
-@@ -2415,7 +2415,8 @@
- which will be useful to you if only because it lists some of the functions that act on
- GSL vectors and matrices that are useful (in fact, essential) but out of the scope of the Apophenia documentation.
- 
--\image html http://apophenia.info/structs.png
-+\image html structs.png
-+\image latex structs.png
+@@ -2618,8 +2618,8 @@
+ relate. It is taken from this
+ <a href="http://modelingwithdata.org/pdfs/cheatsheet.pdf">cheat sheet</a> on general C and SQL use (2 page PDF).
  
+-\image html http://apophenia.info/structs.png width="100%"
+-\image latex ../structs.png width=18cm
++\image html structs.png  width="100%"
++\image latex structs.png width=18cm
  
  All of the elements of the \ref apop_data structure are laid out at middle-left. You have
+ already met the vector, matrix, weights, and text grid.
diff --git a/debian/patches/debianization-bug-597187_757967-mysql_config.patch b/debian/patches/debianization-bug-597187_757967-mysql_config.patch
index ac73942..93ef68a 100644
--- a/debian/patches/debianization-bug-597187_757967-mysql_config.patch
+++ b/debian/patches/debianization-bug-597187_757967-mysql_config.patch
@@ -2,17 +2,17 @@ Description: debianization -- workaround around bugs
  Meant to workaround bugs #597187 and #757967
 Origin: debian
 Author: Jerome Benoit <calculus at rezozer.net>
-Last-Update: 2014-08-12
+Last-Update: 2015-07-10
 
 --- a/configure.ac
 +++ b/configure.ac
-@@ -68,6 +68,9 @@
+@@ -87,6 +87,9 @@
  ## Debian package version
  DEB_PKG_VERSION=$(dpkg-parsechangelog | sed -n -e '/^Version:/s/Version: //p')
  AC_SUBST(DEB_PKG_VERSION)
 +## work around for bugs #597187 and #757967
-+MYSQL_CFLAGS=$(echo "${MYSQL_CFLAGS}" | sed -e 's/-DNDEBUG//' -e 's/-g//' -e 's/-fno-strict-aliasing//' -e 's/[ ]*$//')
-+MYSQL_LDFLAGS=$(echo "${MYSQL_LDFLAGS}" | sed -e 's/-lz//' -e 's/-lrt//' -e 's/-ldl//' -e 's/[ ]*$//')
++MYSQL_CFLAGS=$(echo "${MYSQL_CFLAGS}" | sed -e 's/-DNDEBUG//g;s/-g//g;s/-fabi-version=2//g;s/-fno-omit-frame-pointer//g;s/-fno-strict-aliasing//g;s/[ ]*$//g' | tr -s ' ')
++MYSQL_LDFLAGS=$(echo "${MYSQL_LDFLAGS}" | sed -e 's/-lz//g;s/-lrt//g;s/-ldl//g' | tr -s ' ')
  
  AC_CONFIG_FILES([
  	apophenia.pc
diff --git a/debian/patches/debianization-documentation.patch b/debian/patches/debianization-documentation.patch
index 17a07db..9cb5e61 100644
--- a/debian/patches/debianization-documentation.patch
+++ b/debian/patches/debianization-documentation.patch
@@ -2,13 +2,13 @@ Description: debianization -- documentation
  Address Debian Policy requirements for documentation.
 Origin: debian
 Author: Jerome Benoit <calculus at rezozer.net>
-Last-Update: 2014-08-11
+Last-Update: 2015-07-09
 
 --- a/docs/head.html
 +++ b/docs/head.html
-@@ -2,13 +2,7 @@
- <html> <head>
-      <title>Apophenia: a library for scientific computing</title>
+@@ -11,13 +11,7 @@
+ <script type="text/javascript" src="$relpath^jquery.js"></script>
+ <script type="text/javascript" src="$relpath^dynsections.js"></script>
  
 -<!-- Google is watching. -->
 -<script src="http://www.google-analytics.com/urchin.js" type="text/javascript">
@@ -19,11 +19,10 @@ Last-Update: 2014-08-11
 -</script>
 +<!-- Google is no more watching. -->
  
- 
-      <link rel="stylesheet" href="typical.css" type="text/css" >
+ $treeview
+ $search
 --- a/docs/foot.html
 +++ b/docs/foot.html
-@@ -1,2 +1,2 @@
- <p><p>
--<div class="tiny">Autogenerated by doxygen on $date.</div></body></html>
-+<div class="tiny">Autogenerated by doxygen on $date (Debian $projectnumber).</div></body></html>
+@@ -1 +1 @@
+-</body></html>
++<div class="tiny">Autogenerated by doxygen (Debian $projectnumber).</div></body></html>
diff --git a/debian/patches/debianization.patch b/debian/patches/debianization.patch
index 426563a..f1082eb 100644
--- a/debian/patches/debianization.patch
+++ b/debian/patches/debianization.patch
@@ -3,32 +3,20 @@ Description: debianization
  to address Debian specific stuff in general.
 Origin: debian
 Author: Jerome Benoit <calculus at rezozer.net>
-Last-Update: 2014-10-09
+Last-Update: 2015-07-09
 
 --- a/docs/Makefile.am
 +++ b/docs/Makefile.am
-@@ -35,6 +35,8 @@
- 	sed -i -f edit_globals.sed html/globals.html
- 	sed -i -f edit_group.sed html/group__models.html
- 	sed -i -f edit_width.sed html/*.html
+@@ -48,6 +48,9 @@
+ 	sed -i -f $(top_srcdir)/docs/edit_group.sed html/group__models.html
+ 	sed -i -f $(top_srcdir)/docs/edit_width.sed html/*.html
+ 	$(abs_top_srcdir)/docs/adjust
 +	rdfind -outputname /dev/null -makesymlinks true html
 +	symlinks -r -c -s -v html
++	-rm -f html/jquery.js
  
  doc-clean:
- 	-rm -rf html latex man
-@@ -58,3 +60,12 @@
- 	typical.css \
- 	documentation.h
- 
-+
-+if MAINTAINER_MODE
-+
-+DISTCLEANFILES = $(MAINTAINERCLEANFILES)
-+
-+distclean-local: doc-clean
-+
-+endif
-+
+ 	-rm -rf include html latex man
 --- a/docs/doxygen.conf.in
 +++ b/docs/doxygen.conf.in
 @@ -38,7 +38,7 @@
@@ -40,7 +28,7 @@ Last-Update: 2014-10-09
  
  # Using the PROJECT_BRIEF tag one can provide an optional one line description
  # for a project that appears at the top of each page and should give viewer a
-@@ -789,7 +789,7 @@
+@@ -793,7 +793,7 @@
  # Note that relative paths are relative to the directory from which doxygen is
  # run.
  
@@ -49,8 +37,8 @@ Last-Update: 2014-10-09
  
  # The EXCLUDE_SYMLINKS tag can be used to select whether or not files or
  # directories that are symbolic links (a Unix file system feature) are excluded
-@@ -1552,7 +1552,7 @@
- # If the GENERATE_LATEX tag is set to YES doxygen will generate LaTeX output.
+@@ -1559,7 +1559,7 @@
+ # If the GENERATE_LATEX tag is set to YES, doxygen will generate LaTeX output.
  # The default value is: YES.
  
 -GENERATE_LATEX         = YES
@@ -58,7 +46,7 @@ Last-Update: 2014-10-09
  
  # The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. If a
  # relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-@@ -1754,7 +1754,7 @@
+@@ -1784,7 +1784,7 @@
  # classes and files.
  # The default value is: NO.
  
@@ -72,7 +60,7 @@ Last-Update: 2014-10-09
 @@ -4,13 +4,13 @@
  
  AC_PREREQ(2.60)
- AC_INIT([apophenia], [0.999b], [fluffmail at f-m.fm])
+ AC_INIT([apophenia], [0.999e], [fluffmail at f-m.fm])
 -AM_SILENT_RULES([yes])
 +AM_SILENT_RULES([no])
  AC_CONFIG_SRCDIR([apop_arms.c])
@@ -85,9 +73,9 @@ Last-Update: 2014-10-09
  
  # The normal /usr/local default confused too many people
  ##AC_PREFIX_DEFAULT([/usr])
-@@ -63,6 +63,11 @@
- AC_PATH_PROGS([SQLITE3],[sqlite3],[/usr/bin/sqlite3])
- 
+@@ -82,6 +82,11 @@
+ AC_MSG_RESULT([$enable_extended_tests])
+ AM_CONDITIONAL([EXTENDED_TESTS], [test "X$enable_extended_tests" != "Xno"])
  
 +# Debian stuff
 +## Debian package version
@@ -96,21 +84,29 @@ Last-Update: 2014-10-09
 +
  AC_CONFIG_FILES([
  	apophenia.pc
- 	Makefile
+     apop.h
 --- a/Makefile.am
 +++ b/Makefile.am
-@@ -5,7 +5,7 @@
- 	dist-bzip2 \
- 	dist-zip
+@@ -9,7 +9,7 @@
+ 	--disable-maintainer-mode \
+ 	--enable-extended-tests
  
 -AM_CFLAGS = -g -Wall -O3
 +AM_CFLAGS = -Wno-unused-result
  
  ## Library versioning (C:R:A == current:revision:age)
  ## 0.999b 0:0:0
+@@ -102,7 +102,3 @@
+ 
+ EXTRA_DIST += \
+ 	$(apop_db_INCLUDES)
+-
+-## compatibility
+-doc:
+-	-$(MAKE) -C docs doc
 --- a/tests/Makefile.am
 +++ b/tests/Makefile.am
-@@ -46,6 +46,8 @@
+@@ -66,6 +66,8 @@
  	-I$(top_srcdir) \
  	$(GSL_CFLAGS)
  
diff --git a/debian/patches/series b/debian/patches/series
index 310e474..b9404bf 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1,5 +1,3 @@
-upstream-update-library_version.patch
-upstream-update-docs_doxygen_conf_in.patch
 debianization.patch
 debianization-help2man.patch
 debianization-documentation.patch
diff --git a/debian/patches/upstream-update-docs_doxygen_conf_in.patch b/debian/patches/upstream-update-docs_doxygen_conf_in.patch
deleted file mode 100644
index c56a03c..0000000
--- a/debian/patches/upstream-update-docs_doxygen_conf_in.patch
+++ /dev/null
@@ -1,3239 +0,0 @@
-Description: update doxygen.conf.in
- Update of docs/doxygen.conf.in performed with `doxygen -u';
- meant to be submitted to the upstream maintainer.
-Origin: debian
-Author: Jerome Benoit <calculus at rezozer.net>
-Last-Update: 2014-10-12
-
---- a/docs/doxygen.conf.in
-+++ b/docs/doxygen.conf.in
-@@ -1,110 +1,129 @@
--# Doxyfile 1.8.1.2
-+# Doxyfile 1.8.7
- 
- # This file describes the settings to be used by the documentation system
- # doxygen (www.doxygen.org) for a project.
- #
--# All text after a hash (#) is considered a comment and will be ignored.
-+# All text after a double hash (##) is considered a comment and is placed in
-+# front of the TAG it is preceding.
-+#
-+# All text after a single hash (#) is considered a comment and will be ignored.
- # The format is:
--#       TAG = value [value, ...]
--# For lists items can also be appended using:
--#       TAG += value [value, ...]
--# Values that contain spaces should be placed between quotes (" ").
-+# TAG = value [value, ...]
-+# For lists, items can also be appended using:
-+# TAG += value [value, ...]
-+# Values that contain spaces should be placed between quotes (\" \").
- 
- #---------------------------------------------------------------------------
- # Project related configuration options
- #---------------------------------------------------------------------------
- 
- # This tag specifies the encoding used for all characters in the config file
--# that follow. The default is UTF-8 which is also the encoding used for all
--# text before the first occurrence of this tag. Doxygen uses libiconv (or the
--# iconv built into libc) for the transcoding. See
--# http://www.gnu.org/software/libiconv for the list of possible encodings.
-+# that follow. The default is UTF-8 which is also the encoding used for all text
-+# before the first occurrence of this tag. Doxygen uses libiconv (or the iconv
-+# built into libc) for the transcoding. See http://www.gnu.org/software/libiconv
-+# for the list of possible encodings.
-+# The default value is: UTF-8.
- 
- DOXYFILE_ENCODING      = UTF-8
- 
--# The PROJECT_NAME tag is a single word (or sequence of words) that should
--# identify the project. Note that if you do not use Doxywizard you need
--# to put quotes around the project name if it contains spaces.
-+# The PROJECT_NAME tag is a single word (or a sequence of words surrounded by
-+# double-quotes, unless you are using Doxywizard) that should identify the
-+# project for which the documentation is generated. This name is used in the
-+# title of most generated pages and in a few other places.
-+# The default value is: My Project.
- 
- PROJECT_NAME           = Apophenia
- 
--# The PROJECT_NUMBER tag can be used to enter a project or revision number.
--# This could be handy for archiving the generated documentation or
--# if some version control system is used.
-+# The PROJECT_NUMBER tag can be used to enter a project or revision number. This
-+# could be handy for archiving the generated documentation or if some version
-+# control system is used.
- 
- PROJECT_NUMBER         =
- 
- # Using the PROJECT_BRIEF tag one can provide an optional one line description
--# for a project that appears at the top of each page and should give viewer
--# a quick idea about the purpose of the project. Keep the description short.
-+# for a project that appears at the top of each page and should give viewer a
-+# quick idea about the purpose of the project. Keep the description short.
- 
- PROJECT_BRIEF          =
- 
--# With the PROJECT_LOGO tag one can specify an logo or icon that is
--# included in the documentation. The maximum height of the logo should not
--# exceed 55 pixels and the maximum width should not exceed 200 pixels.
--# Doxygen will copy the logo to the output directory.
-+# With the PROJECT_LOGO tag one can specify an logo or icon that is included in
-+# the documentation. The maximum height of the logo should not exceed 55 pixels
-+# and the maximum width should not exceed 200 pixels. Doxygen will copy the logo
-+# to the output directory.
- 
- PROJECT_LOGO           =
- 
--# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute)
--# base path where the generated documentation will be put.
--# If a relative path is entered, it will be relative to the location
--# where doxygen was started. If left blank the current directory will be used.
-+# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) path
-+# into which the generated documentation will be written. If a relative path is
-+# entered, it will be relative to the location where doxygen was started. If
-+# left blank the current directory will be used.
- 
- OUTPUT_DIRECTORY       =
- 
--# If the CREATE_SUBDIRS tag is set to YES, then doxygen will create
--# 4096 sub-directories (in 2 levels) under the output directory of each output
--# format and will distribute the generated files over these directories.
--# Enabling this option can be useful when feeding doxygen a huge amount of
--# source files, where putting all generated files in the same directory would
--# otherwise cause performance problems for the file system.
-+# If the CREATE_SUBDIRS tag is set to YES, then doxygen will create 4096 sub-
-+# directories (in 2 levels) under the output directory of each output format and
-+# will distribute the generated files over these directories. Enabling this
-+# option can be useful when feeding doxygen a huge amount of source files, where
-+# putting all generated files in the same directory would otherwise causes
-+# performance problems for the file system.
-+# The default value is: NO.
- 
- CREATE_SUBDIRS         = NO
- 
-+# If the ALLOW_UNICODE_NAMES tag is set to YES, doxygen will allow non-ASCII
-+# characters to appear in the names of generated files. If set to NO, non-ASCII
-+# characters will be escaped, for example _xE3_x81_x84 will be used for Unicode
-+# U+3044.
-+# The default value is: NO.
-+
-+ALLOW_UNICODE_NAMES    = NO
-+
- # The OUTPUT_LANGUAGE tag is used to specify the language in which all
- # documentation generated by doxygen is written. Doxygen will use this
- # information to generate all constant output in the proper language.
--# The default language is English, other supported languages are:
--# Afrikaans, Arabic, Brazilian, Catalan, Chinese, Chinese-Traditional,
--# Croatian, Czech, Danish, Dutch, Esperanto, Farsi, Finnish, French, German,
--# Greek, Hungarian, Italian, Japanese, Japanese-en (Japanese with English
--# messages), Korean, Korean-en, Lithuanian, Norwegian, Macedonian, Persian,
--# Polish, Portuguese, Romanian, Russian, Serbian, Serbian-Cyrillic, Slovak,
--# Slovene, Spanish, Swedish, Ukrainian, and Vietnamese.
-+# Possible values are: Afrikaans, Arabic, Armenian, Brazilian, Catalan, Chinese,
-+# Chinese-Traditional, Croatian, Czech, Danish, Dutch, English (United States),
-+# Esperanto, Farsi (Persian), Finnish, French, German, Greek, Hungarian,
-+# Indonesian, Italian, Japanese, Japanese-en (Japanese with English messages),
-+# Korean, Korean-en (Korean with English messages), Latvian, Lithuanian,
-+# Macedonian, Norwegian, Persian (Farsi), Polish, Portuguese, Romanian, Russian,
-+# Serbian, Serbian-Cyrillic, Slovak, Slovene, Spanish, Swedish, Turkish,
-+# Ukrainian and Vietnamese.
-+# The default value is: English.
- 
- OUTPUT_LANGUAGE        = English
- 
--# If the BRIEF_MEMBER_DESC tag is set to YES (the default) Doxygen will
--# include brief member descriptions after the members that are listed in
--# the file and class documentation (similar to JavaDoc).
--# Set to NO to disable this.
-+# If the BRIEF_MEMBER_DESC tag is set to YES doxygen will include brief member
-+# descriptions after the members that are listed in the file and class
-+# documentation (similar to Javadoc). Set to NO to disable this.
-+# The default value is: YES.
- 
- BRIEF_MEMBER_DESC      = YES
- 
--# If the REPEAT_BRIEF tag is set to YES (the default) Doxygen will prepend
--# the brief description of a member or function before the detailed description.
--# Note: if both HIDE_UNDOC_MEMBERS and BRIEF_MEMBER_DESC are set to NO, the
-+# If the REPEAT_BRIEF tag is set to YES doxygen will prepend the brief
-+# description of a member or function before the detailed description
-+#
-+# Note: If both HIDE_UNDOC_MEMBERS and BRIEF_MEMBER_DESC are set to NO, the
- # brief descriptions will be completely suppressed.
-+# The default value is: YES.
- 
- REPEAT_BRIEF           = YES
- 
--# This tag implements a quasi-intelligent brief description abbreviator
--# that is used to form the text in various listings. Each string
--# in this list, if found as the leading text of the brief description, will be
--# stripped from the text and the result after processing the whole list, is
--# used as the annotated text. Otherwise, the brief description is used as-is.
--# If left blank, the following values are used ("$name" is automatically
--# replaced with the name of the entity): "The $name class" "The $name widget"
--# "The $name file" "is" "provides" "specifies" "contains"
--# "represents" "a" "an" "the"
-+# This tag implements a quasi-intelligent brief description abbreviator that is
-+# used to form the text in various listings. Each string in this list, if found
-+# as the leading text of the brief description, will be stripped from the text
-+# and the result, after processing the whole list, is used as the annotated
-+# text. Otherwise, the brief description is used as-is. If left blank, the
-+# following values are used ($name is automatically replaced with the name of
-+# the entity):The $name class, The $name widget, The $name file, is, provides,
-+# specifies, contains, represents, a, an and the.
- 
- ABBREVIATE_BRIEF       =
- 
- # If the ALWAYS_DETAILED_SEC and REPEAT_BRIEF tags are both set to YES then
--# Doxygen will generate a detailed section even if there is only a brief
-+# doxygen will generate a detailed section even if there is only a brief
- # description.
-+# The default value is: NO.
- 
- ALWAYS_DETAILED_SEC    = NO
- 
-@@ -112,169 +131,207 @@
- # inherited members of a class in the documentation of that class as if those
- # members were ordinary class members. Constructors, destructors and assignment
- # operators of the base classes will not be shown.
-+# The default value is: NO.
- 
- INLINE_INHERITED_MEMB  = NO
- 
--# If the FULL_PATH_NAMES tag is set to YES then Doxygen will prepend the full
--# path before files name in the file list and in the header files. If set
--# to NO the shortest path that makes the file name unique will be used.
-+# If the FULL_PATH_NAMES tag is set to YES doxygen will prepend the full path
-+# before files name in the file list and in the header files. If set to NO the
-+# shortest path that makes the file name unique will be used
-+# The default value is: YES.
- 
- FULL_PATH_NAMES        = NO
- 
--# If the FULL_PATH_NAMES tag is set to YES then the STRIP_FROM_PATH tag
--# can be used to strip a user-defined part of the path. Stripping is
--# only done if one of the specified strings matches the left-hand part of
--# the path. The tag can be used to show relative paths in the file list.
--# If left blank the directory from which doxygen is run is used as the
--# path to strip.
-+# The STRIP_FROM_PATH tag can be used to strip a user-defined part of the path.
-+# Stripping is only done if one of the specified strings matches the left-hand
-+# part of the path. The tag can be used to show relative paths in the file list.
-+# If left blank the directory from which doxygen is run is used as the path to
-+# strip.
-+#
-+# Note that you can specify absolute paths here, but also relative paths, which
-+# will be relative from the directory where doxygen is started.
-+# This tag requires that the tag FULL_PATH_NAMES is set to YES.
- 
- STRIP_FROM_PATH        =
- 
--# The STRIP_FROM_INC_PATH tag can be used to strip a user-defined part of
--# the path mentioned in the documentation of a class, which tells
--# the reader which header file to include in order to use a class.
--# If left blank only the name of the header file containing the class
--# definition is used. Otherwise one should specify the include paths that
--# are normally passed to the compiler using the -I flag.
-+# The STRIP_FROM_INC_PATH tag can be used to strip a user-defined part of the
-+# path mentioned in the documentation of a class, which tells the reader which
-+# header file to include in order to use a class. If left blank only the name of
-+# the header file containing the class definition is used. Otherwise one should
-+# specify the list of include paths that are normally passed to the compiler
-+# using the -I flag.
- 
- STRIP_FROM_INC_PATH    =
- 
--# If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter
--# (but less readable) file names. This can be useful if your file system
--# doesn't support long names like on DOS, Mac, or CD-ROM.
-+# If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter (but
-+# less readable) file names. This can be useful is your file systems doesn't
-+# support long names like on DOS, Mac, or CD-ROM.
-+# The default value is: NO.
- 
- SHORT_NAMES            = NO
- 
--# If the JAVADOC_AUTOBRIEF tag is set to YES then Doxygen
--# will interpret the first line (until the first dot) of a JavaDoc-style
--# comment as the brief description. If set to NO, the JavaDoc
--# comments will behave just like regular Qt-style comments
--# (thus requiring an explicit @brief command for a brief description.)
-+# If the JAVADOC_AUTOBRIEF tag is set to YES then doxygen will interpret the
-+# first line (until the first dot) of a Javadoc-style comment as the brief
-+# description. If set to NO, the Javadoc-style will behave just like regular Qt-
-+# style comments (thus requiring an explicit @brief command for a brief
-+# description.)
-+# The default value is: NO.
- 
- JAVADOC_AUTOBRIEF      = NO
- 
--# If the QT_AUTOBRIEF tag is set to YES then Doxygen will
--# interpret the first line (until the first dot) of a Qt-style
--# comment as the brief description. If set to NO, the comments
--# will behave just like regular Qt-style comments (thus requiring
--# an explicit \brief command for a brief description.)
-+# If the QT_AUTOBRIEF tag is set to YES then doxygen will interpret the first
-+# line (until the first dot) of a Qt-style comment as the brief description. If
-+# set to NO, the Qt-style will behave just like regular Qt-style comments (thus
-+# requiring an explicit \brief command for a brief description.)
-+# The default value is: NO.
- 
- QT_AUTOBRIEF           = NO
- 
--# The MULTILINE_CPP_IS_BRIEF tag can be set to YES to make Doxygen
--# treat a multi-line C++ special comment block (i.e. a block of //! or ///
--# comments) as a brief description. This used to be the default behaviour.
--# The new default is to treat a multi-line C++ comment block as a detailed
--# description. Set this tag to YES if you prefer the old behaviour instead.
-+# The MULTILINE_CPP_IS_BRIEF tag can be set to YES to make doxygen treat a
-+# multi-line C++ special comment block (i.e. a block of //! or /// comments) as
-+# a brief description. This used to be the default behavior. The new default is
-+# to treat a multi-line C++ comment block as a detailed description. Set this
-+# tag to YES if you prefer the old behavior instead.
-+#
-+# Note that setting this tag to YES also means that rational rose comments are
-+# not recognized any more.
-+# The default value is: NO.
- 
- MULTILINE_CPP_IS_BRIEF = NO
- 
--# If the INHERIT_DOCS tag is set to YES (the default) then an undocumented
--# member inherits the documentation from any documented member that it
--# re-implements.
-+# If the INHERIT_DOCS tag is set to YES then an undocumented member inherits the
-+# documentation from any documented member that it re-implements.
-+# The default value is: YES.
- 
- INHERIT_DOCS           = YES
- 
--# If the SEPARATE_MEMBER_PAGES tag is set to YES, then doxygen will produce
--# a new page for each member. If set to NO, the documentation of a member will
--# be part of the file/class/namespace that contains it.
-+# If the SEPARATE_MEMBER_PAGES tag is set to YES, then doxygen will produce a
-+# new page for each member. If set to NO, the documentation of a member will be
-+# part of the file/class/namespace that contains it.
-+# The default value is: NO.
- 
- SEPARATE_MEMBER_PAGES  = NO
- 
--# The TAB_SIZE tag can be used to set the number of spaces in a tab.
--# Doxygen uses this value to replace tabs by spaces in code fragments.
-+# The TAB_SIZE tag can be used to set the number of spaces in a tab. Doxygen
-+# uses this value to replace tabs by spaces in code fragments.
-+# Minimum value: 1, maximum value: 16, default value: 4.
- 
- TAB_SIZE               = 5
- 
--# This tag can be used to specify a number of aliases that acts
--# as commands in the documentation. An alias has the form "name=value".
--# For example adding "sideeffect=\par Side Effects:\n" will allow you to
--# put the command \sideeffect (or @sideeffect) in the documentation, which
--# will result in a user-defined paragraph with heading "Side Effects:".
--# You can put \n's in the value part of an alias to insert newlines.
-+# This tag can be used to specify a number of aliases that act as commands in
-+# the documentation. An alias has the form:
-+# name=value
-+# For example adding
-+# "sideeffect=@par Side Effects:\n"
-+# will allow you to put the command \sideeffect (or @sideeffect) in the
-+# documentation, which will result in a user-defined paragraph with heading
-+# "Side Effects:". You can put \n's in the value part of an alias to insert
-+# newlines.
- 
- ALIASES                =
- 
- # This tag can be used to specify a number of word-keyword mappings (TCL only).
--# A mapping has the form "name=value". For example adding
--# "class=itcl::class" will allow you to use the command class in the
--# itcl::class meaning.
-+# A mapping has the form "name=value". For example adding "class=itcl::class"
-+# will allow you to use the command class in the itcl::class meaning.
- 
- TCL_SUBST              =
- 
--# Set the OPTIMIZE_OUTPUT_FOR_C tag to YES if your project consists of C
--# sources only. Doxygen will then generate output that is more tailored for C.
--# For instance, some of the names that are used will be different. The list
--# of all members will be omitted, etc.
-+# Set the OPTIMIZE_OUTPUT_FOR_C tag to YES if your project consists of C sources
-+# only. Doxygen will then generate output that is more tailored for C. For
-+# instance, some of the names that are used will be different. The list of all
-+# members will be omitted, etc.
-+# The default value is: NO.
- 
- OPTIMIZE_OUTPUT_FOR_C  = YES
- 
--# Set the OPTIMIZE_OUTPUT_JAVA tag to YES if your project consists of Java
--# sources only. Doxygen will then generate output that is more tailored for
--# Java. For instance, namespaces will be presented as packages, qualified
--# scopes will look different, etc.
-+# Set the OPTIMIZE_OUTPUT_JAVA tag to YES if your project consists of Java or
-+# Python sources only. Doxygen will then generate output that is more tailored
-+# for that language. For instance, namespaces will be presented as packages,
-+# qualified scopes will look different, etc.
-+# The default value is: NO.
- 
- OPTIMIZE_OUTPUT_JAVA   = NO
- 
- # Set the OPTIMIZE_FOR_FORTRAN tag to YES if your project consists of Fortran
--# sources only. Doxygen will then generate output that is more tailored for
--# Fortran.
-+# sources. Doxygen will then generate output that is tailored for Fortran.
-+# The default value is: NO.
- 
- OPTIMIZE_FOR_FORTRAN   = NO
- 
- # Set the OPTIMIZE_OUTPUT_VHDL tag to YES if your project consists of VHDL
--# sources. Doxygen will then generate output that is tailored for
--# VHDL.
-+# sources. Doxygen will then generate output that is tailored for VHDL.
-+# The default value is: NO.
- 
- OPTIMIZE_OUTPUT_VHDL   = NO
- 
- # Doxygen selects the parser to use depending on the extension of the files it
--# parses. With this tag you can assign which parser to use for a given extension.
--# Doxygen has a built-in mapping, but you can override or extend it using this
--# tag. The format is ext=language, where ext is a file extension, and language
--# is one of the parsers supported by doxygen: IDL, Java, Javascript, CSharp, C,
--# C++, D, PHP, Objective-C, Python, Fortran, VHDL, C, C++. For instance to make
--# doxygen treat .inc files as Fortran files (default is PHP), and .f files as C
--# (default is Fortran), use: inc=Fortran f=C. Note that for custom extensions
--# you also need to set FILE_PATTERNS otherwise the files are not read by doxygen.
-+# parses. With this tag you can assign which parser to use for a given
-+# extension. Doxygen has a built-in mapping, but you can override or extend it
-+# using this tag. The format is ext=language, where ext is a file extension, and
-+# language is one of the parsers supported by doxygen: IDL, Java, Javascript,
-+# C#, C, C++, D, PHP, Objective-C, Python, Fortran (fixed format Fortran:
-+# FortranFixed, free formatted Fortran: FortranFree, unknown formatted Fortran:
-+# Fortran. In the later case the parser tries to guess whether the code is fixed
-+# or free formatted code, this is the default for Fortran type files), VHDL. For
-+# instance to make doxygen treat .inc files as Fortran files (default is PHP),
-+# and .f files as C (default is Fortran), use: inc=Fortran f=C.
-+#
-+# Note For files without extension you can use no_extension as a placeholder.
-+#
-+# Note that for custom extensions you also need to set FILE_PATTERNS otherwise
-+# the files are not read by doxygen.
- 
- EXTENSION_MAPPING      =
- 
--# If MARKDOWN_SUPPORT is enabled (the default) then doxygen pre-processes all
--# comments according to the Markdown format, which allows for more readable
-+# If the MARKDOWN_SUPPORT tag is enabled then doxygen pre-processes all comments
-+# according to the Markdown format, which allows for more readable
- # documentation. See http://daringfireball.net/projects/markdown/ for details.
--# The output of markdown processing is further processed by doxygen, so you
--# can mix doxygen, HTML, and XML commands with Markdown formatting.
--# Disable only in case of backward compatibilities issues.
-+# The output of markdown processing is further processed by doxygen, so you can
-+# mix doxygen, HTML, and XML commands with Markdown formatting. Disable only in
-+# case of backward compatibilities issues.
-+# The default value is: YES.
- 
- MARKDOWN_SUPPORT       = YES
- 
-+# When enabled doxygen tries to link words that correspond to documented
-+# classes, or namespaces to their corresponding documentation. Such a link can
-+# be prevented in individual cases by by putting a % sign in front of the word
-+# or globally by setting AUTOLINK_SUPPORT to NO.
-+# The default value is: YES.
-+
-+AUTOLINK_SUPPORT       = YES
-+
- # If you use STL classes (i.e. std::string, std::vector, etc.) but do not want
--# to include (a tag file for) the STL sources as input, then you should
--# set this tag to YES in order to let doxygen match functions declarations and
--# definitions whose arguments contain STL classes (e.g. func(std::string); v.s.
--# func(std::string) {}). This also makes the inheritance and collaboration
-+# to include (a tag file for) the STL sources as input, then you should set this
-+# tag to YES in order to let doxygen match functions declarations and
-+# definitions whose arguments contain STL classes (e.g. func(std::string);
-+# versus func(std::string) {}). This also make the inheritance and collaboration
- # diagrams that involve STL classes more complete and accurate.
-+# The default value is: NO.
- 
- BUILTIN_STL_SUPPORT    = NO
- 
- # If you use Microsoft's C++/CLI language, you should set this option to YES to
- # enable parsing support.
-+# The default value is: NO.
- 
- CPP_CLI_SUPPORT        = NO
- 
--# Set the SIP_SUPPORT tag to YES if your project consists of sip sources only.
--# Doxygen will parse them like normal C++ but will assume all classes use public
--# instead of private inheritance when no explicit protection keyword is present.
-+# Set the SIP_SUPPORT tag to YES if your project consists of sip (see:
-+# http://www.riverbankcomputing.co.uk/software/sip/intro) sources only. Doxygen
-+# will parse them like normal C++ but will assume all classes use public instead
-+# of private inheritance when no explicit protection keyword is present.
-+# The default value is: NO.
- 
- SIP_SUPPORT            = NO
- 
--# For Microsoft's IDL there are propget and propput attributes to indicate getter
--# and setter methods for a property. Setting this option to YES (the default)
--# will make doxygen replace the get and set methods by a property in the
--# documentation. This will only work if the methods are indeed getting or
--# setting a simple type. If this is not the case, or you want to show the
--# methods anyway, you should set this option to NO.
-+# For Microsoft's IDL there are propget and propput attributes to indicate
-+# getter and setter methods for a property. Setting this option to YES will make
-+# doxygen to replace the get and set methods by a property in the documentation.
-+# This will only work if the methods are indeed getting or setting a simple
-+# type. If this is not the case, or you want to show the methods anyway, you
-+# should set this option to NO.
-+# The default value is: YES.
- 
- IDL_PROPERTY_SUPPORT   = YES
- 
-@@ -282,67 +339,61 @@
- # tag is set to YES, then doxygen will reuse the documentation of the first
- # member in the group (if any) for the other members of the group. By default
- # all members of a group must be documented explicitly.
-+# The default value is: NO.
- 
- DISTRIBUTE_GROUP_DOC   = NO
- 
--# Set the SUBGROUPING tag to YES (the default) to allow class member groups of
--# the same type (for instance a group of public functions) to be put as a
--# subgroup of that type (e.g. under the Public Functions section). Set it to
--# NO to prevent subgrouping. Alternatively, this can be done per class using
--# the \nosubgrouping command.
-+# Set the SUBGROUPING tag to YES to allow class member groups of the same type
-+# (for instance a group of public functions) to be put as a subgroup of that
-+# type (e.g. under the Public Functions section). Set it to NO to prevent
-+# subgrouping. Alternatively, this can be done per class using the
-+# \nosubgrouping command.
-+# The default value is: YES.
- 
- SUBGROUPING            = YES
- 
--# When the INLINE_GROUPED_CLASSES tag is set to YES, classes, structs and
--# unions are shown inside the group in which they are included (e.g. using
--# @ingroup) instead of on a separate page (for HTML and Man pages) or
--# section (for LaTeX and RTF).
-+# When the INLINE_GROUPED_CLASSES tag is set to YES, classes, structs and unions
-+# are shown inside the group in which they are included (e.g. using \ingroup)
-+# instead of on a separate page (for HTML and Man pages) or section (for LaTeX
-+# and RTF).
-+#
-+# Note that this feature does not work in combination with
-+# SEPARATE_MEMBER_PAGES.
-+# The default value is: NO.
- 
- INLINE_GROUPED_CLASSES = NO
- 
--# When the INLINE_SIMPLE_STRUCTS tag is set to YES, structs, classes, and
--# unions with only public data fields will be shown inline in the documentation
--# of the scope in which they are defined (i.e. file, namespace, or group
--# documentation), provided this scope is documented. If set to NO (the default),
--# structs, classes, and unions are shown on a separate page (for HTML and Man
--# pages) or section (for LaTeX and RTF).
-+# When the INLINE_SIMPLE_STRUCTS tag is set to YES, structs, classes, and unions
-+# with only public data fields or simple typedef fields will be shown inline in
-+# the documentation of the scope in which they are defined (i.e. file,
-+# namespace, or group documentation), provided this scope is documented. If set
-+# to NO, structs, classes, and unions are shown on a separate page (for HTML and
-+# Man pages) or section (for LaTeX and RTF).
-+# The default value is: NO.
- 
- INLINE_SIMPLE_STRUCTS  = NO
- 
--# When TYPEDEF_HIDES_STRUCT is enabled, a typedef of a struct, union, or enum
--# is documented as struct, union, or enum with the name of the typedef. So
-+# When TYPEDEF_HIDES_STRUCT tag is enabled, a typedef of a struct, union, or
-+# enum is documented as struct, union, or enum with the name of the typedef. So
- # typedef struct TypeS {} TypeT, will appear in the documentation as a struct
- # with name TypeT. When disabled the typedef will appear as a member of a file,
--# namespace, or class. And the struct will be named TypeS. This can typically
--# be useful for C code in case the coding convention dictates that all compound
-+# namespace, or class. And the struct will be named TypeS. This can typically be
-+# useful for C code in case the coding convention dictates that all compound
- # types are typedef'ed and only the typedef is referenced, never the tag name.
-+# The default value is: NO.
- 
- TYPEDEF_HIDES_STRUCT   = NO
- 
--# The SYMBOL_CACHE_SIZE determines the size of the internal cache use to
--# determine which symbols to keep in memory and which to flush to disk.
--# When the cache is full, less often used symbols will be written to disk.
--# For small to medium size projects (<1000 input files) the default value is
--# probably good enough. For larger projects a too small cache size can cause
--# doxygen to be busy swapping symbols to and from disk most of the time
--# causing a significant performance penalty.
--# If the system has enough physical memory increasing the cache will improve the
--# performance by keeping more symbols in memory. Note that the value works on
--# a logarithmic scale so increasing the size by one will roughly double the
--# memory usage. The cache size is given by this formula:
--# 2^(16+SYMBOL_CACHE_SIZE). The valid range is 0..9, the default is 0,
--# corresponding to a cache size of 2^16 = 65536 symbols.
--
--SYMBOL_CACHE_SIZE      = 0
--
--# Similar to the SYMBOL_CACHE_SIZE the size of the symbol lookup cache can be
--# set using LOOKUP_CACHE_SIZE. This cache is used to resolve symbols given
--# their name and scope. Since this can be an expensive process and often the
--# same symbol appear multiple times in the code, doxygen keeps a cache of
--# pre-resolved symbols. If the cache is too small doxygen will become slower.
--# If the cache is too large, memory is wasted. The cache size is given by this
--# formula: 2^(16+LOOKUP_CACHE_SIZE). The valid range is 0..9, the default is 0,
--# corresponding to a cache size of 2^16 = 65536 symbols.
-+# The size of the symbol lookup cache can be set using LOOKUP_CACHE_SIZE. This
-+# cache is used to resolve symbols given their name and scope. Since this can be
-+# an expensive process and often the same symbol appears multiple times in the
-+# code, doxygen keeps a cache of pre-resolved symbols. If the cache is too small
-+# doxygen will become slower. If the cache is too large, memory is wasted. The
-+# cache size is given by this formula: 2^(16+LOOKUP_CACHE_SIZE). The valid range
-+# is 0..9, the default is 0, corresponding to a cache size of 2^16=65536
-+# symbols. At the end of a run doxygen will report the cache usage and suggest
-+# the optimal cache size from a speed point of view.
-+# Minimum value: 0, maximum value: 9, default value: 0.
- 
- LOOKUP_CACHE_SIZE      = 0
- 
-@@ -351,339 +402,390 @@
- #---------------------------------------------------------------------------
- 
- # If the EXTRACT_ALL tag is set to YES doxygen will assume all entities in
--# documentation are documented, even if no documentation was available.
--# Private class members and static file members will be hidden unless
--# the EXTRACT_PRIVATE and EXTRACT_STATIC tags are set to YES
-+# documentation are documented, even if no documentation was available. Private
-+# class members and static file members will be hidden unless the
-+# EXTRACT_PRIVATE respectively EXTRACT_STATIC tags are set to YES.
-+# Note: This will also disable the warnings about undocumented members that are
-+# normally produced when WARNINGS is set to YES.
-+# The default value is: NO.
- 
- EXTRACT_ALL            = NO
- 
--# If the EXTRACT_PRIVATE tag is set to YES all private members of a class
--# will be included in the documentation.
-+# If the EXTRACT_PRIVATE tag is set to YES all private members of a class will
-+# be included in the documentation.
-+# The default value is: NO.
- 
- EXTRACT_PRIVATE        = NO
- 
--# If the EXTRACT_PACKAGE tag is set to YES all members with package or internal scope will be included in the documentation.
-+# If the EXTRACT_PACKAGE tag is set to YES all members with package or internal
-+# scope will be included in the documentation.
-+# The default value is: NO.
- 
- EXTRACT_PACKAGE        = NO
- 
--# If the EXTRACT_STATIC tag is set to YES all static members of a file
--# will be included in the documentation.
-+# If the EXTRACT_STATIC tag is set to YES all static members of a file will be
-+# included in the documentation.
-+# The default value is: NO.
- 
- EXTRACT_STATIC         = NO
- 
--# If the EXTRACT_LOCAL_CLASSES tag is set to YES classes (and structs)
--# defined locally in source files will be included in the documentation.
--# If set to NO only classes defined in header files are included.
-+# If the EXTRACT_LOCAL_CLASSES tag is set to YES classes (and structs) defined
-+# locally in source files will be included in the documentation. If set to NO
-+# only classes defined in header files are included. Does not have any effect
-+# for Java sources.
-+# The default value is: YES.
- 
- EXTRACT_LOCAL_CLASSES  = YES
- 
--# This flag is only useful for Objective-C code. When set to YES local
--# methods, which are defined in the implementation section but not in
--# the interface are included in the documentation.
--# If set to NO (the default) only methods in the interface are included.
-+# This flag is only useful for Objective-C code. When set to YES local methods,
-+# which are defined in the implementation section but not in the interface are
-+# included in the documentation. If set to NO only methods in the interface are
-+# included.
-+# The default value is: NO.
- 
- EXTRACT_LOCAL_METHODS  = NO
- 
- # If this flag is set to YES, the members of anonymous namespaces will be
- # extracted and appear in the documentation as a namespace called
--# 'anonymous_namespace{file}', where file will be replaced with the base
--# name of the file that contains the anonymous namespace. By default
--# anonymous namespaces are hidden.
-+# 'anonymous_namespace{file}', where file will be replaced with the base name of
-+# the file that contains the anonymous namespace. By default anonymous namespace
-+# are hidden.
-+# The default value is: NO.
- 
- EXTRACT_ANON_NSPACES   = NO
- 
--# If the HIDE_UNDOC_MEMBERS tag is set to YES, Doxygen will hide all
--# undocumented members of documented classes, files or namespaces.
--# If set to NO (the default) these members will be included in the
--# various overviews, but no documentation section is generated.
--# This option has no effect if EXTRACT_ALL is enabled.
-+# If the HIDE_UNDOC_MEMBERS tag is set to YES, doxygen will hide all
-+# undocumented members inside documented classes or files. If set to NO these
-+# members will be included in the various overviews, but no documentation
-+# section is generated. This option has no effect if EXTRACT_ALL is enabled.
-+# The default value is: NO.
- 
- HIDE_UNDOC_MEMBERS     = NO
- 
--# If the HIDE_UNDOC_CLASSES tag is set to YES, Doxygen will hide all
--# undocumented classes that are normally visible in the class hierarchy.
--# If set to NO (the default) these classes will be included in the various
--# overviews. This option has no effect if EXTRACT_ALL is enabled.
-+# If the HIDE_UNDOC_CLASSES tag is set to YES, doxygen will hide all
-+# undocumented classes that are normally visible in the class hierarchy. If set
-+# to NO these classes will be included in the various overviews. This option has
-+# no effect if EXTRACT_ALL is enabled.
-+# The default value is: NO.
- 
- HIDE_UNDOC_CLASSES     = NO
- 
--# If the HIDE_FRIEND_COMPOUNDS tag is set to YES, Doxygen will hide all
--# friend (class|struct|union) declarations.
--# If set to NO (the default) these declarations will be included in the
--# documentation.
-+# If the HIDE_FRIEND_COMPOUNDS tag is set to YES, doxygen will hide all friend
-+# (class|struct|union) declarations. If set to NO these declarations will be
-+# included in the documentation.
-+# The default value is: NO.
- 
- HIDE_FRIEND_COMPOUNDS  = NO
- 
--# If the HIDE_IN_BODY_DOCS tag is set to YES, Doxygen will hide any
--# documentation blocks found inside the body of a function.
--# If set to NO (the default) these blocks will be appended to the
--# function's detailed documentation block.
-+# If the HIDE_IN_BODY_DOCS tag is set to YES, doxygen will hide any
-+# documentation blocks found inside the body of a function. If set to NO these
-+# blocks will be appended to the function's detailed documentation block.
-+# The default value is: NO.
- 
- HIDE_IN_BODY_DOCS      = NO
- 
--# The INTERNAL_DOCS tag determines if documentation
--# that is typed after a \internal command is included. If the tag is set
--# to NO (the default) then the documentation will be excluded.
--# Set it to YES to include the internal documentation.
-+# The INTERNAL_DOCS tag determines if documentation that is typed after a
-+# \internal command is included. If the tag is set to NO then the documentation
-+# will be excluded. Set it to YES to include the internal documentation.
-+# The default value is: NO.
- 
- INTERNAL_DOCS          = NO
- 
--# If the CASE_SENSE_NAMES tag is set to NO then Doxygen will only generate
--# file names in lower-case letters. If set to YES upper-case letters are also
-+# If the CASE_SENSE_NAMES tag is set to NO then doxygen will only generate file
-+# names in lower-case letters. If set to YES upper-case letters are also
- # allowed. This is useful if you have classes or files whose names only differ
- # in case and if your file system supports case sensitive file names. Windows
- # and Mac users are advised to set this option to NO.
-+# The default value is: system dependent.
- 
- CASE_SENSE_NAMES       = YES
- 
--# If the HIDE_SCOPE_NAMES tag is set to NO (the default) then Doxygen
--# will show members with their full class and namespace scopes in the
--# documentation. If set to YES the scope will be hidden.
-+# If the HIDE_SCOPE_NAMES tag is set to NO then doxygen will show members with
-+# their full class and namespace scopes in the documentation. If set to YES the
-+# scope will be hidden.
-+# The default value is: NO.
- 
- HIDE_SCOPE_NAMES       = NO
- 
--# If the SHOW_INCLUDE_FILES tag is set to YES (the default) then Doxygen
--# will put a list of the files that are included by a file in the documentation
--# of that file.
-+# If the SHOW_INCLUDE_FILES tag is set to YES then doxygen will put a list of
-+# the files that are included by a file in the documentation of that file.
-+# The default value is: YES.
- 
- SHOW_INCLUDE_FILES     = NO
- 
--# If the FORCE_LOCAL_INCLUDES tag is set to YES then Doxygen
--# will list include files with double quotes in the documentation
--# rather than with sharp brackets.
-+# If the SHOW_GROUPED_MEMB_INC tag is set to YES then Doxygen will add for each
-+# grouped member an include statement to the documentation, telling the reader
-+# which file to include in order to use the member.
-+# The default value is: NO.
-+
-+SHOW_GROUPED_MEMB_INC  = NO
-+
-+# If the FORCE_LOCAL_INCLUDES tag is set to YES then doxygen will list include
-+# files with double quotes in the documentation rather than with sharp brackets.
-+# The default value is: NO.
- 
- FORCE_LOCAL_INCLUDES   = NO
- 
--# If the INLINE_INFO tag is set to YES (the default) then a tag [inline]
--# is inserted in the documentation for inline members.
-+# If the INLINE_INFO tag is set to YES then a tag [inline] is inserted in the
-+# documentation for inline members.
-+# The default value is: YES.
- 
- INLINE_INFO            = YES
- 
--# If the SORT_MEMBER_DOCS tag is set to YES (the default) then doxygen
--# will sort the (detailed) documentation of file and class members
--# alphabetically by member name. If set to NO the members will appear in
--# declaration order.
-+# If the SORT_MEMBER_DOCS tag is set to YES then doxygen will sort the
-+# (detailed) documentation of file and class members alphabetically by member
-+# name. If set to NO the members will appear in declaration order.
-+# The default value is: YES.
- 
- SORT_MEMBER_DOCS       = YES
- 
--# If the SORT_BRIEF_DOCS tag is set to YES then doxygen will sort the
--# brief documentation of file, namespace and class members alphabetically
--# by member name. If set to NO (the default) the members will appear in
--# declaration order.
-+# If the SORT_BRIEF_DOCS tag is set to YES then doxygen will sort the brief
-+# descriptions of file, namespace and class members alphabetically by member
-+# name. If set to NO the members will appear in declaration order. Note that
-+# this will also influence the order of the classes in the class list.
-+# The default value is: NO.
- 
- SORT_BRIEF_DOCS        = NO
- 
--# If the SORT_MEMBERS_CTORS_1ST tag is set to YES then doxygen
--# will sort the (brief and detailed) documentation of class members so that
--# constructors and destructors are listed first. If set to NO (the default)
--# the constructors will appear in the respective orders defined by
--# SORT_MEMBER_DOCS and SORT_BRIEF_DOCS.
--# This tag will be ignored for brief docs if SORT_BRIEF_DOCS is set to NO
--# and ignored for detailed docs if SORT_MEMBER_DOCS is set to NO.
-+# If the SORT_MEMBERS_CTORS_1ST tag is set to YES then doxygen will sort the
-+# (brief and detailed) documentation of class members so that constructors and
-+# destructors are listed first. If set to NO the constructors will appear in the
-+# respective orders defined by SORT_BRIEF_DOCS and SORT_MEMBER_DOCS.
-+# Note: If SORT_BRIEF_DOCS is set to NO this option is ignored for sorting brief
-+# member documentation.
-+# Note: If SORT_MEMBER_DOCS is set to NO this option is ignored for sorting
-+# detailed member documentation.
-+# The default value is: NO.
- 
- SORT_MEMBERS_CTORS_1ST = NO
- 
--# If the SORT_GROUP_NAMES tag is set to YES then doxygen will sort the
--# hierarchy of group names into alphabetical order. If set to NO (the default)
--# the group names will appear in their defined order.
-+# If the SORT_GROUP_NAMES tag is set to YES then doxygen will sort the hierarchy
-+# of group names into alphabetical order. If set to NO the group names will
-+# appear in their defined order.
-+# The default value is: NO.
- 
- SORT_GROUP_NAMES       = NO
- 
--# If the SORT_BY_SCOPE_NAME tag is set to YES, the class list will be
--# sorted by fully-qualified names, including namespaces. If set to
--# NO (the default), the class list will be sorted only by class name,
--# not including the namespace part.
-+# If the SORT_BY_SCOPE_NAME tag is set to YES, the class list will be sorted by
-+# fully-qualified names, including namespaces. If set to NO, the class list will
-+# be sorted only by class name, not including the namespace part.
- # Note: This option is not very useful if HIDE_SCOPE_NAMES is set to YES.
--# Note: This option applies only to the class list, not to the
--# alphabetical list.
-+# Note: This option applies only to the class list, not to the alphabetical
-+# list.
-+# The default value is: NO.
- 
- SORT_BY_SCOPE_NAME     = NO
- 
--# If the STRICT_PROTO_MATCHING option is enabled and doxygen fails to
--# do proper type resolution of all parameters of a function it will reject a
--# match between the prototype and the implementation of a member function even
--# if there is only one candidate or it is obvious which candidate to choose
--# by doing a simple string match. By disabling STRICT_PROTO_MATCHING doxygen
--# will still accept a match between prototype and implementation in such cases.
-+# If the STRICT_PROTO_MATCHING option is enabled and doxygen fails to do proper
-+# type resolution of all parameters of a function it will reject a match between
-+# the prototype and the implementation of a member function even if there is
-+# only one candidate or it is obvious which candidate to choose by doing a
-+# simple string match. By disabling STRICT_PROTO_MATCHING doxygen will still
-+# accept a match between prototype and implementation in such cases.
-+# The default value is: NO.
- 
- STRICT_PROTO_MATCHING  = NO
- 
--# The GENERATE_TODOLIST tag can be used to enable (YES) or
--# disable (NO) the todo list. This list is created by putting \todo
--# commands in the documentation.
-+# The GENERATE_TODOLIST tag can be used to enable ( YES) or disable ( NO) the
-+# todo list. This list is created by putting \todo commands in the
-+# documentation.
-+# The default value is: YES.
- 
- GENERATE_TODOLIST      = YES
- 
--# The GENERATE_TESTLIST tag can be used to enable (YES) or
--# disable (NO) the test list. This list is created by putting \test
--# commands in the documentation.
-+# The GENERATE_TESTLIST tag can be used to enable ( YES) or disable ( NO) the
-+# test list. This list is created by putting \test commands in the
-+# documentation.
-+# The default value is: YES.
- 
- GENERATE_TESTLIST      = YES
- 
--# The GENERATE_BUGLIST tag can be used to enable (YES) or
--# disable (NO) the bug list. This list is created by putting \bug
--# commands in the documentation.
-+# The GENERATE_BUGLIST tag can be used to enable ( YES) or disable ( NO) the bug
-+# list. This list is created by putting \bug commands in the documentation.
-+# The default value is: YES.
- 
- GENERATE_BUGLIST       = YES
- 
--# The GENERATE_DEPRECATEDLIST tag can be used to enable (YES) or
--# disable (NO) the deprecated list. This list is created by putting
--# \deprecated commands in the documentation.
-+# The GENERATE_DEPRECATEDLIST tag can be used to enable ( YES) or disable ( NO)
-+# the deprecated list. This list is created by putting \deprecated commands in
-+# the documentation.
-+# The default value is: YES.
- 
- GENERATE_DEPRECATEDLIST= YES
- 
--# The ENABLED_SECTIONS tag can be used to enable conditional
--# documentation sections, marked by \if sectionname ... \endif.
-+# The ENABLED_SECTIONS tag can be used to enable conditional documentation
-+# sections, marked by \if <section_label> ... \endif and \cond <section_label>
-+# ... \endcond blocks.
- 
- ENABLED_SECTIONS       =
- 
--# The MAX_INITIALIZER_LINES tag determines the maximum number of lines
--# the initial value of a variable or macro consists of for it to appear in
--# the documentation. If the initializer consists of more lines than specified
--# here it will be hidden. Use a value of 0 to hide initializers completely.
--# The appearance of the initializer of individual variables and macros in the
--# documentation can be controlled using \showinitializer or \hideinitializer
--# command in the documentation regardless of this setting.
-+# The MAX_INITIALIZER_LINES tag determines the maximum number of lines that the
-+# initial value of a variable or macro / define can have for it to appear in the
-+# documentation. If the initializer consists of more lines than specified here
-+# it will be hidden. Use a value of 0 to hide initializers completely. The
-+# appearance of the value of individual variables and macros / defines can be
-+# controlled using \showinitializer or \hideinitializer command in the
-+# documentation regardless of this setting.
-+# Minimum value: 0, maximum value: 10000, default value: 30.
- 
- MAX_INITIALIZER_LINES  = 30
- 
--# Set the SHOW_USED_FILES tag to NO to disable the list of files generated
--# at the bottom of the documentation of classes and structs. If set to YES the
--# list will mention the files that were used to generate the documentation.
-+# Set the SHOW_USED_FILES tag to NO to disable the list of files generated at
-+# the bottom of the documentation of classes and structs. If set to YES the list
-+# will mention the files that were used to generate the documentation.
-+# The default value is: YES.
- 
- SHOW_USED_FILES        = NO
- 
--# Set the SHOW_FILES tag to NO to disable the generation of the Files page.
--# This will remove the Files entry from the Quick Index and from the
--# Folder Tree View (if specified). The default is YES.
-+# Set the SHOW_FILES tag to NO to disable the generation of the Files page. This
-+# will remove the Files entry from the Quick Index and from the Folder Tree View
-+# (if specified).
-+# The default value is: YES.
- 
- SHOW_FILES             = YES
- 
--# Set the SHOW_NAMESPACES tag to NO to disable the generation of the
--# Namespaces page.
--# This will remove the Namespaces entry from the Quick Index
--# and from the Folder Tree View (if specified). The default is YES.
-+# Set the SHOW_NAMESPACES tag to NO to disable the generation of the Namespaces
-+# page. This will remove the Namespaces entry from the Quick Index and from the
-+# Folder Tree View (if specified).
-+# The default value is: YES.
- 
- SHOW_NAMESPACES        = YES
- 
- # The FILE_VERSION_FILTER tag can be used to specify a program or script that
- # doxygen should invoke to get the current version for each file (typically from
- # the version control system). Doxygen will invoke the program by executing (via
--# popen()) the command <command> <input-file>, where <command> is the value of
--# the FILE_VERSION_FILTER tag, and <input-file> is the name of an input file
--# provided by doxygen. Whatever the program writes to standard output
--# is used as the file version. See the manual for examples.
-+# popen()) the command command input-file, where command is the value of the
-+# FILE_VERSION_FILTER tag, and input-file is the name of an input file provided
-+# by doxygen. Whatever the program writes to standard output is used as the file
-+# version. For an example see the documentation.
- 
- FILE_VERSION_FILTER    =
- 
- # The LAYOUT_FILE tag can be used to specify a layout file which will be parsed
- # by doxygen. The layout file controls the global structure of the generated
- # output files in an output format independent way. To create the layout file
--# that represents doxygen's defaults, run doxygen with the -l option.
--# You can optionally specify a file name after the option, if omitted
--# DoxygenLayout.xml will be used as the name of the layout file.
-+# that represents doxygen's defaults, run doxygen with the -l option. You can
-+# optionally specify a file name after the option, if omitted DoxygenLayout.xml
-+# will be used as the name of the layout file.
-+#
-+# Note that if you run doxygen from a directory containing a file called
-+# DoxygenLayout.xml, doxygen will parse it automatically even if the LAYOUT_FILE
-+# tag is left empty.
- 
- LAYOUT_FILE            =
- 
--# The CITE_BIB_FILES tag can be used to specify one or more bib files
--# containing the references data. This must be a list of .bib files. The
--# .bib extension is automatically appended if omitted. Using this command
--# requires the bibtex tool to be installed. See also
--# http://en.wikipedia.org/wiki/BibTeX for more info. For LaTeX the style
--# of the bibliography can be controlled using LATEX_BIB_STYLE. To use this
--# feature you need bibtex and perl available in the search path.
-+# The CITE_BIB_FILES tag can be used to specify one or more bib files containing
-+# the reference definitions. This must be a list of .bib files. The .bib
-+# extension is automatically appended if omitted. This requires the bibtex tool
-+# to be installed. See also http://en.wikipedia.org/wiki/BibTeX for more info.
-+# For LaTeX the style of the bibliography can be controlled using
-+# LATEX_BIB_STYLE. To use this feature you need bibtex and perl available in the
-+# search path. Do not use file names with spaces, bibtex cannot handle them. See
-+# also \cite for info how to create references.
- 
- CITE_BIB_FILES         =
- 
- #---------------------------------------------------------------------------
--# configuration options related to warning and progress messages
-+# Configuration options related to warning and progress messages
- #---------------------------------------------------------------------------
- 
--# The QUIET tag can be used to turn on/off the messages that are generated
--# by doxygen. Possible values are YES and NO. If left blank NO is used.
-+# The QUIET tag can be used to turn on/off the messages that are generated to
-+# standard output by doxygen. If QUIET is set to YES this implies that the
-+# messages are off.
-+# The default value is: NO.
- 
- QUIET                  = YES
- 
- # The WARNINGS tag can be used to turn on/off the warning messages that are
--# generated by doxygen. Possible values are YES and NO. If left blank
--# NO is used.
-+# generated to standard error ( stderr) by doxygen. If WARNINGS is set to YES
-+# this implies that the warnings are on.
-+#
-+# Tip: Turn warnings on while writing the documentation.
-+# The default value is: YES.
- 
- WARNINGS               = YES
- 
--# If WARN_IF_UNDOCUMENTED is set to YES, then doxygen will generate warnings
--# for undocumented members. If EXTRACT_ALL is set to YES then this flag will
--# automatically be disabled.
-+# If the WARN_IF_UNDOCUMENTED tag is set to YES, then doxygen will generate
-+# warnings for undocumented members. If EXTRACT_ALL is set to YES then this flag
-+# will automatically be disabled.
-+# The default value is: YES.
- 
- WARN_IF_UNDOCUMENTED   = NO
- 
--# If WARN_IF_DOC_ERROR is set to YES, doxygen will generate warnings for
--# potential errors in the documentation, such as not documenting some
--# parameters in a documented function, or documenting parameters that
--# don't exist or using markup commands wrongly.
-+# If the WARN_IF_DOC_ERROR tag is set to YES, doxygen will generate warnings for
-+# potential errors in the documentation, such as not documenting some parameters
-+# in a documented function, or documenting parameters that don't exist or using
-+# markup commands wrongly.
-+# The default value is: YES.
- 
- WARN_IF_DOC_ERROR      = YES
- 
--# The WARN_NO_PARAMDOC option can be enabled to get warnings for
--# functions that are documented, but have no documentation for their parameters
--# or return value. If set to NO (the default) doxygen will only warn about
--# wrong or incomplete parameter documentation, but not about the absence of
--# documentation.
-+# This WARN_NO_PARAMDOC option can be enabled to get warnings for functions that
-+# are documented, but have no documentation for their parameters or return
-+# value. If set to NO doxygen will only warn about wrong or incomplete parameter
-+# documentation, but not about the absence of documentation.
-+# The default value is: NO.
- 
- WARN_NO_PARAMDOC       = NO
- 
--# The WARN_FORMAT tag determines the format of the warning messages that
--# doxygen can produce. The string should contain the $file, $line, and $text
--# tags, which will be replaced by the file and line number from which the
--# warning originated and the warning text. Optionally the format may contain
--# $version, which will be replaced by the version of the file (if it could
--# be obtained via FILE_VERSION_FILTER)
-+# The WARN_FORMAT tag determines the format of the warning messages that doxygen
-+# can produce. The string should contain the $file, $line, and $text tags, which
-+# will be replaced by the file and line number from which the warning originated
-+# and the warning text. Optionally the format may contain $version, which will
-+# be replaced by the version of the file (if it could be obtained via
-+# FILE_VERSION_FILTER)
-+# The default value is: $file:$line: $text.
- 
- WARN_FORMAT            = "$file:$line: $text"
- 
--# The WARN_LOGFILE tag can be used to specify a file to which warning
--# and error messages should be written. If left blank the output is written
--# to stderr.
-+# The WARN_LOGFILE tag can be used to specify a file to which warning and error
-+# messages should be written. If left blank the output is written to standard
-+# error (stderr).
- 
- WARN_LOGFILE           = doxygen.log
- 
- #---------------------------------------------------------------------------
--# configuration options related to the input files
-+# Configuration options related to the input files
- #---------------------------------------------------------------------------
- 
--# The INPUT tag can be used to specify the files and/or directories that contain
--# documented source files. You may enter file names like "myfile.cpp" or
--# directories like "/usr/src/myproject". Separate the files or directories
--# with spaces.
-+# The INPUT tag is used to specify the files and/or directories that contain
-+# documented source files. You may enter file names like myfile.cpp or
-+# directories like /usr/src/myproject. Separate the files or directories with
-+# spaces.
-+# Note: If this tag is empty the current directory is searched.
- 
- INPUT                  = @abs_top_srcdir@
- 
- # This tag can be used to specify the character encoding of the source files
--# that doxygen parses. Internally doxygen uses the UTF-8 encoding, which is
--# also the default input encoding. Doxygen uses libiconv (or the iconv built
--# into libc) for the transcoding. See http://www.gnu.org/software/libiconv for
--# the list of possible encodings.
-+# that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses
-+# libiconv (or the iconv built into libc) for the transcoding. See the libiconv
-+# documentation (see: http://www.gnu.org/software/libiconv) for the list of
-+# possible encodings.
-+# The default value is: UTF-8.
- 
- INPUT_ENCODING         = UTF-8
- 
- # If the value of the INPUT tag contains directories, you can use the
--# FILE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp
--# and *.h) to filter out the source-files in the directories. If left
--# blank the following patterns are tested:
--# *.c *.cc *.cxx *.cpp *.c++ *.d *.java *.ii *.ixx *.ipp *.i++ *.inl *.h *.hh
--# *.hxx *.hpp *.h++ *.idl *.odl *.cs *.php *.php3 *.inc *.m *.mm *.dox *.py
--# *.f90 *.f *.for *.vhd *.vhdl
-+# FILE_PATTERNS tag to specify one or more wildcard patterns (like *.cpp and
-+# *.h) to filter out the source-files in the directories. If left blank the
-+# following patterns are tested:*.c, *.cc, *.cxx, *.cpp, *.c++, *.java, *.ii,
-+# *.ixx, *.ipp, *.i++, *.inl, *.idl, *.ddl, *.odl, *.h, *.hh, *.hxx, *.hpp,
-+# *.h++, *.cs, *.d, *.php, *.php4, *.php5, *.phtml, *.inc, *.m, *.markdown,
-+# *.md, *.mm, *.dox, *.py, *.f90, *.f, *.for, *.tcl, *.vhd, *.vhdl, *.ucf,
-+# *.qsf, *.as and *.js.
- 
- FILE_PATTERNS          =
- 
--# The RECURSIVE tag can be used to turn specify whether or not subdirectories
--# should be searched for input files as well. Possible values are YES and NO.
--# If left blank NO is used.
-+# The RECURSIVE tag can be used to specify whether or not subdirectories should
-+# be searched for input files as well.
-+# The default value is: NO.
- 
- RECURSIVE              = YES
- 
- # The EXCLUDE tag can be used to specify files and/or directories that should be
- # excluded from the INPUT source files. This way you can easily exclude a
- # subdirectory from a directory tree whose root is specified with the INPUT tag.
-+#
- # Note that relative paths are relative to the directory from which doxygen is
- # run.
- 
-@@ -692,14 +794,16 @@
- # The EXCLUDE_SYMLINKS tag can be used to select whether or not files or
- # directories that are symbolic links (a Unix file system feature) are excluded
- # from the input.
-+# The default value is: NO.
- 
- EXCLUDE_SYMLINKS       = NO
- 
- # If the value of the INPUT tag contains directories, you can use the
- # EXCLUDE_PATTERNS tag to specify one or more wildcard patterns to exclude
--# certain files from those directories. Note that the wildcards are matched
--# against the file with absolute path, so to exclude all test directories
--# for example use the pattern */test/*
-+# certain files from those directories.
-+#
-+# Note that the wildcards are matched against the file with absolute path, so to
-+# exclude all test directories for example use the pattern */test/*
- 
- EXCLUDE_PATTERNS       =
- 
-@@ -708,755 +812,1076 @@
- # output. The symbol name can be a fully qualified name, a word, or if the
- # wildcard * is used, a substring. Examples: ANamespace, AClass,
- # AClass::ANamespace, ANamespace::*Test
-+#
-+# Note that the wildcards are matched against the file with absolute path, so to
-+# exclude all test directories use the pattern */test/*
- 
- EXCLUDE_SYMBOLS        =
- 
--# The EXAMPLE_PATH tag can be used to specify one or more files or
--# directories that contain example code fragments that are included (see
--# the \include command).
-+# The EXAMPLE_PATH tag can be used to specify one or more files or directories
-+# that contain example code fragments that are included (see the \include
-+# command).
- 
- EXAMPLE_PATH           = @abs_top_srcdir@
- 
- # If the value of the EXAMPLE_PATH tag contains directories, you can use the
--# EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp
--# and *.h) to filter out the source-files in the directories. If left
--# blank all files are included.
-+# EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp and
-+# *.h) to filter out the source-files in the directories. If left blank all
-+# files are included.
- 
- EXAMPLE_PATTERNS       =
- 
- # If the EXAMPLE_RECURSIVE tag is set to YES then subdirectories will be
--# searched for input files to be used with the \include or \dontinclude
--# commands irrespective of the value of the RECURSIVE tag.
--# Possible values are YES and NO. If left blank NO is used.
-+# searched for input files to be used with the \include or \dontinclude commands
-+# irrespective of the value of the RECURSIVE tag.
-+# The default value is: NO.
- 
- EXAMPLE_RECURSIVE      = YES
- 
--# The IMAGE_PATH tag can be used to specify one or more files or
--# directories that contain image that are included in the documentation (see
--# the \image command).
-+# The IMAGE_PATH tag can be used to specify one or more files or directories
-+# that contain images that are to be included in the documentation (see the
-+# \image command).
- 
- IMAGE_PATH             = .
- 
- # The INPUT_FILTER tag can be used to specify a program that doxygen should
- # invoke to filter for each input file. Doxygen will invoke the filter program
--# by executing (via popen()) the command <filter> <input-file>, where <filter>
--# is the value of the INPUT_FILTER tag, and <input-file> is the name of an
--# input file. Doxygen will then use the output that the filter program writes
--# to standard output.
--# If FILTER_PATTERNS is specified, this tag will be
--# ignored.
-+# by executing (via popen()) the command:
-+#
-+# <filter> <input-file>
-+#
-+# where <filter> is the value of the INPUT_FILTER tag, and <input-file> is the
-+# name of an input file. Doxygen will then use the output that the filter
-+# program writes to standard output. If FILTER_PATTERNS is specified, this tag
-+# will be ignored.
-+#
-+# Note that the filter must not add or remove lines; it is applied before the
-+# code is scanned, but not when the output code is generated. If lines are added
-+# or removed, the anchors will not be placed correctly.
- 
- INPUT_FILTER           =
- 
- # The FILTER_PATTERNS tag can be used to specify filters on a per file pattern
--# basis.
--# Doxygen will compare the file name with each pattern and apply the
--# filter if there is a match.
--# The filters are a list of the form:
--# pattern=filter (like *.cpp=my_cpp_filter). See INPUT_FILTER for further
--# info on how filters are used. If FILTER_PATTERNS is empty or if
--# non of the patterns match the file name, INPUT_FILTER is applied.
-+# basis. Doxygen will compare the file name with each pattern and apply the
-+# filter if there is a match. The filters are a list of the form: pattern=filter
-+# (like *.cpp=my_cpp_filter). See INPUT_FILTER for further information on how
-+# filters are used. If the FILTER_PATTERNS tag is empty or if none of the
-+# patterns match the file name, INPUT_FILTER is applied.
- 
- FILTER_PATTERNS        =
- 
- # If the FILTER_SOURCE_FILES tag is set to YES, the input filter (if set using
--# INPUT_FILTER) will be used to filter the input files when producing source
--# files to browse (i.e. when SOURCE_BROWSER is set to YES).
-+# INPUT_FILTER ) will also be used to filter the input files that are used for
-+# producing the source files to browse (i.e. when SOURCE_BROWSER is set to YES).
-+# The default value is: NO.
- 
- FILTER_SOURCE_FILES    = NO
- 
- # The FILTER_SOURCE_PATTERNS tag can be used to specify source filters per file
--# pattern. A pattern will override the setting for FILTER_PATTERN (if any)
--# and it is also possible to disable source filtering for a specific pattern
--# using *.ext= (so without naming a filter). This option only has effect when
--# FILTER_SOURCE_FILES is enabled.
-+# pattern. A pattern will override the setting for FILTER_PATTERN (if any) and
-+# it is also possible to disable source filtering for a specific pattern using
-+# *.ext= (so without naming a filter).
-+# This tag requires that the tag FILTER_SOURCE_FILES is set to YES.
- 
- FILTER_SOURCE_PATTERNS =
- 
-+# If the USE_MDFILE_AS_MAINPAGE tag refers to the name of a markdown file that
-+# is part of the input, its contents will be placed on the main page
-+# (index.html). This can be useful if you have a project on for instance GitHub
-+# and want to reuse the introduction page also for the doxygen output.
-+
-+USE_MDFILE_AS_MAINPAGE =
-+
- #---------------------------------------------------------------------------
--# configuration options related to source browsing
-+# Configuration options related to source browsing
- #---------------------------------------------------------------------------
- 
--# If the SOURCE_BROWSER tag is set to YES then a list of source files will
--# be generated. Documented entities will be cross-referenced with these sources.
--# Note: To get rid of all source code in the generated output, make sure also
--# VERBATIM_HEADERS is set to NO.
-+# If the SOURCE_BROWSER tag is set to YES then a list of source files will be
-+# generated. Documented entities will be cross-referenced with these sources.
-+#
-+# Note: To get rid of all source code in the generated output, make sure that
-+# also VERBATIM_HEADERS is set to NO.
-+# The default value is: NO.
- 
- SOURCE_BROWSER         = NO
- 
--# Setting the INLINE_SOURCES tag to YES will include the body
--# of functions and classes directly in the documentation.
-+# Setting the INLINE_SOURCES tag to YES will include the body of functions,
-+# classes and enums directly into the documentation.
-+# The default value is: NO.
- 
- INLINE_SOURCES         = NO
- 
--# Setting the STRIP_CODE_COMMENTS tag to YES (the default) will instruct
--# doxygen to hide any special comment blocks from generated source code
--# fragments. Normal C, C++ and Fortran comments will always remain visible.
-+# Setting the STRIP_CODE_COMMENTS tag to YES will instruct doxygen to hide any
-+# special comment blocks from generated source code fragments. Normal C, C++ and
-+# Fortran comments will always remain visible.
-+# The default value is: YES.
- 
- STRIP_CODE_COMMENTS    = YES
- 
--# If the REFERENCED_BY_RELATION tag is set to YES
--# then for each documented function all documented
--# functions referencing it will be listed.
-+# If the REFERENCED_BY_RELATION tag is set to YES then for each documented
-+# function all documented functions referencing it will be listed.
-+# The default value is: NO.
- 
- REFERENCED_BY_RELATION = NO
- 
--# If the REFERENCES_RELATION tag is set to YES
--# then for each documented function all documented entities
--# called/used by that function will be listed.
-+# If the REFERENCES_RELATION tag is set to YES then for each documented function
-+# all documented entities called/used by that function will be listed.
-+# The default value is: NO.
- 
- REFERENCES_RELATION    = NO
- 
--# If the REFERENCES_LINK_SOURCE tag is set to YES (the default)
--# and SOURCE_BROWSER tag is set to YES, then the hyperlinks from
--# functions in REFERENCES_RELATION and REFERENCED_BY_RELATION lists will
--# link to the source code.
--# Otherwise they will link to the documentation.
-+# If the REFERENCES_LINK_SOURCE tag is set to YES and SOURCE_BROWSER tag is set
-+# to YES, then the hyperlinks from functions in REFERENCES_RELATION and
-+# REFERENCED_BY_RELATION lists will link to the source code. Otherwise they will
-+# link to the documentation.
-+# The default value is: YES.
- 
- REFERENCES_LINK_SOURCE = YES
- 
--# If the USE_HTAGS tag is set to YES then the references to source code
--# will point to the HTML generated by the htags(1) tool instead of doxygen
--# built-in source browser. The htags tool is part of GNU's global source
--# tagging system (see http://www.gnu.org/software/global/global.html). You
--# will need version 4.8.6 or higher.
-+# If SOURCE_TOOLTIPS is enabled (the default) then hovering a hyperlink in the
-+# source code will show a tooltip with additional information such as prototype,
-+# brief description and links to the definition and documentation. Since this
-+# will make the HTML file larger and loading of large files a bit slower, you
-+# can opt to disable this feature.
-+# The default value is: YES.
-+# This tag requires that the tag SOURCE_BROWSER is set to YES.
-+
-+SOURCE_TOOLTIPS        = YES
-+
-+# If the USE_HTAGS tag is set to YES then the references to source code will
-+# point to the HTML generated by the htags(1) tool instead of doxygen built-in
-+# source browser. The htags tool is part of GNU's global source tagging system
-+# (see http://www.gnu.org/software/global/global.html). You will need version
-+# 4.8.6 or higher.
-+#
-+# To use it do the following:
-+# - Install the latest version of global
-+# - Enable SOURCE_BROWSER and USE_HTAGS in the config file
-+# - Make sure the INPUT points to the root of the source tree
-+# - Run doxygen as normal
-+#
-+# Doxygen will invoke htags (and that will in turn invoke gtags), so these
-+# tools must be available from the command line (i.e. in the search path).
-+#
-+# The result: instead of the source browser generated by doxygen, the links to
-+# source code will now point to the output of htags.
-+# The default value is: NO.
-+# This tag requires that the tag SOURCE_BROWSER is set to YES.
- 
- USE_HTAGS              = NO
- 
--# If the VERBATIM_HEADERS tag is set to YES (the default) then Doxygen
--# will generate a verbatim copy of the header file for each class for
--# which an include is specified. Set to NO to disable this.
-+# If the VERBATIM_HEADERS tag is set the YES then doxygen will generate a
-+# verbatim copy of the header file for each class for which an include is
-+# specified. Set to NO to disable this.
-+# See also: Section \class.
-+# The default value is: YES.
- 
- VERBATIM_HEADERS       = YES
- 
- #---------------------------------------------------------------------------
--# configuration options related to the alphabetical class index
-+# Configuration options related to the alphabetical class index
- #---------------------------------------------------------------------------
- 
--# If the ALPHABETICAL_INDEX tag is set to YES, an alphabetical index
--# of all compounds will be generated. Enable this if the project
--# contains a lot of classes, structs, unions or interfaces.
-+# If the ALPHABETICAL_INDEX tag is set to YES, an alphabetical index of all
-+# compounds will be generated. Enable this if the project contains a lot of
-+# classes, structs, unions or interfaces.
-+# The default value is: YES.
- 
- ALPHABETICAL_INDEX     = YES
- 
--# If the alphabetical index is enabled (see ALPHABETICAL_INDEX) then
--# the COLS_IN_ALPHA_INDEX tag can be used to specify the number of columns
--# in which this list will be split (can be a number in the range [1..20])
-+# The COLS_IN_ALPHA_INDEX tag can be used to specify the number of columns in
-+# which the alphabetical index list will be split.
-+# Minimum value: 1, maximum value: 20, default value: 5.
-+# This tag requires that the tag ALPHABETICAL_INDEX is set to YES.
- 
- COLS_IN_ALPHA_INDEX    = 3
- 
--# In case all classes in a project start with a common prefix, all
--# classes will be put under the same header in the alphabetical index.
--# The IGNORE_PREFIX tag can be used to specify one or more prefixes that
--# should be ignored while generating the index headers.
-+# In case all classes in a project start with a common prefix, all classes will
-+# be put under the same header in the alphabetical index. The IGNORE_PREFIX tag
-+# can be used to specify a prefix (or a list of prefixes) that should be ignored
-+# while generating the index headers.
-+# This tag requires that the tag ALPHABETICAL_INDEX is set to YES.
- 
- IGNORE_PREFIX          =
- 
- #---------------------------------------------------------------------------
--# configuration options related to the HTML output
-+# Configuration options related to the HTML output
- #---------------------------------------------------------------------------
- 
--# If the GENERATE_HTML tag is set to YES (the default) Doxygen will
--# generate HTML output.
-+# If the GENERATE_HTML tag is set to YES doxygen will generate HTML output
-+# The default value is: YES.
- 
- GENERATE_HTML          = YES
- 
--# The HTML_OUTPUT tag is used to specify where the HTML docs will be put.
--# If a relative path is entered the value of OUTPUT_DIRECTORY will be
--# put in front of it. If left blank `html' will be used as the default path.
-+# The HTML_OUTPUT tag is used to specify where the HTML docs will be put. If a
-+# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-+# it.
-+# The default directory is: html.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_OUTPUT            = html
- 
--# The HTML_FILE_EXTENSION tag can be used to specify the file extension for
--# each generated HTML page (for example: .htm,.php,.asp). If it is left blank
--# doxygen will generate files with .html extension.
-+# The HTML_FILE_EXTENSION tag can be used to specify the file extension for each
-+# generated HTML page (for example: .htm, .php, .asp).
-+# The default value is: .html.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_FILE_EXTENSION    = .html
- 
--# The HTML_HEADER tag can be used to specify a personal HTML header for
--# each generated HTML page. If it is left blank doxygen will generate a
--# standard header. Note that when using a custom header you are responsible
--#  for the proper inclusion of any scripts and style sheets that doxygen
--# needs, which is dependent on the configuration options used.
--# It is advised to generate a default header using "doxygen -w html
--# header.html footer.html stylesheet.css YourConfigFile" and then modify
--# that header. Note that the header is subject to change so you typically
--# have to redo this when upgrading to a newer version of doxygen or when
--# changing the value of configuration settings such as GENERATE_TREEVIEW!
-+# The HTML_HEADER tag can be used to specify a user-defined HTML header file for
-+# each generated HTML page. If the tag is left blank doxygen will generate a
-+# standard header.
-+#
-+# To get valid HTML the header file that includes any scripts and style sheets
-+# that doxygen needs, which is dependent on the configuration options used (e.g.
-+# the setting GENERATE_TREEVIEW). It is highly recommended to start with a
-+# default header using
-+# doxygen -w html new_header.html new_footer.html new_stylesheet.css
-+# YourConfigFile
-+# and then modify the file new_header.html. See also section "Doxygen usage"
-+# for information on how to generate the default header that doxygen normally
-+# uses.
-+# Note: The header is subject to change so you typically have to regenerate the
-+# default header when upgrading to a newer version of doxygen. For a description
-+# of the possible markers and block names see the documentation.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_HEADER            = head.html
- 
--# The HTML_FOOTER tag can be used to specify a personal HTML footer for
--# each generated HTML page. If it is left blank doxygen will generate a
--# standard footer.
-+# The HTML_FOOTER tag can be used to specify a user-defined HTML footer for each
-+# generated HTML page. If the tag is left blank doxygen will generate a standard
-+# footer. See HTML_HEADER for more information on how to generate a default
-+# footer and what special commands can be used inside the footer. See also
-+# section "Doxygen usage" for information on how to generate the default footer
-+# that doxygen normally uses.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_FOOTER            = foot.html
- 
--# The HTML_STYLESHEET tag can be used to specify a user-defined cascading
--# style sheet that is used by each HTML page. It can be used to
--# fine-tune the look of the HTML output. If the tag is left blank doxygen
--# will generate a default style sheet. Note that doxygen will try to copy
--# the style sheet file to the HTML output directory, so don't put your own
--# style sheet in the HTML output directory as well, or it will be erased!
-+# The HTML_STYLESHEET tag can be used to specify a user-defined cascading style
-+# sheet that is used by each HTML page. It can be used to fine-tune the look of
-+# the HTML output. If left blank doxygen will generate a default style sheet.
-+# See also section "Doxygen usage" for information on how to generate the style
-+# sheet that doxygen normally uses.
-+# Note: It is recommended to use HTML_EXTRA_STYLESHEET instead of this tag, as
-+# it is more robust and this tag (HTML_STYLESHEET) will in the future become
-+# obsolete.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_STYLESHEET        = typical.css
- 
-+# The HTML_EXTRA_STYLESHEET tag can be used to specify an additional user-
-+# defined cascading style sheet that is included after the standard style sheets
-+# created by doxygen. Using this option one can overrule certain style aspects.
-+# This is preferred over using HTML_STYLESHEET since it does not replace the
-+# standard style sheet and is therefor more robust against future updates.
-+# Doxygen will copy the style sheet file to the output directory. For an example
-+# see the documentation.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
-+
-+HTML_EXTRA_STYLESHEET  =
-+
- # The HTML_EXTRA_FILES tag can be used to specify one or more extra images or
- # other source files which should be copied to the HTML output directory. Note
- # that these files will be copied to the base HTML output directory. Use the
--# $relpath$ marker in the HTML_HEADER and/or HTML_FOOTER files to load these
--# files. In the HTML_STYLESHEET file, use the file name only. Also note that
--# the files will be copied as-is; there are no commands or markers available.
-+# $relpath^ marker in the HTML_HEADER and/or HTML_FOOTER files to load these
-+# files. In the HTML_STYLESHEET file, use the file name only. Also note that the
-+# files will be copied as-is; there are no commands or markers available.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_EXTRA_FILES       =
- 
--# The HTML_COLORSTYLE_HUE tag controls the color of the HTML output.
--# Doxygen will adjust the colors in the style sheet and background images
--# according to this color. Hue is specified as an angle on a colorwheel,
--# see http://en.wikipedia.org/wiki/Hue for more information.
--# For instance the value 0 represents red, 60 is yellow, 120 is green,
--# 180 is cyan, 240 is blue, 300 purple, and 360 is red again.
--# The allowed range is 0 to 359.
-+# The HTML_COLORSTYLE_HUE tag controls the color of the HTML output. Doxygen
-+# will adjust the colors in the stylesheet and background images according to
-+# this color. Hue is specified as an angle on a colorwheel, see
-+# http://en.wikipedia.org/wiki/Hue for more information. For instance the value
-+# 0 represents red, 60 is yellow, 120 is green, 180 is cyan, 240 is blue, 300
-+# purple, and 360 is red again.
-+# Minimum value: 0, maximum value: 359, default value: 220.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_COLORSTYLE_HUE    = 220
- 
--# The HTML_COLORSTYLE_SAT tag controls the purity (or saturation) of
--# the colors in the HTML output. For a value of 0 the output will use
--# grayscales only. A value of 255 will produce the most vivid colors.
-+# The HTML_COLORSTYLE_SAT tag controls the purity (or saturation) of the colors
-+# in the HTML output. For a value of 0 the output will use grayscales only. A
-+# value of 255 will produce the most vivid colors.
-+# Minimum value: 0, maximum value: 255, default value: 100.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_COLORSTYLE_SAT    = 100
- 
--# The HTML_COLORSTYLE_GAMMA tag controls the gamma correction applied to
--# the luminance component of the colors in the HTML output. Values below
--# 100 gradually make the output lighter, whereas values above 100 make
--# the output darker. The value divided by 100 is the actual gamma applied,
--# so 80 represents a gamma of 0.8, The value 220 represents a gamma of 2.2,
--# and 100 does not change the gamma.
-+# The HTML_COLORSTYLE_GAMMA tag controls the gamma correction applied to the
-+# luminance component of the colors in the HTML output. Values below 100
-+# gradually make the output lighter, whereas values above 100 make the output
-+# darker. The value divided by 100 is the actual gamma applied, so 80 represents
-+# a gamma of 0.8, The value 220 represents a gamma of 2.2, and 100 does not
-+# change the gamma.
-+# Minimum value: 40, maximum value: 240, default value: 80.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_COLORSTYLE_GAMMA  = 80
- 
- # If the HTML_TIMESTAMP tag is set to YES then the footer of each generated HTML
--# page will contain the date and time when the page was generated. Setting
--# this to NO can help when comparing the output of multiple runs.
-+# page will contain the date and time when the page was generated. Setting this
-+# to NO can help when comparing the output of multiple runs.
-+# The default value is: YES.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_TIMESTAMP         = YES
- 
- # If the HTML_DYNAMIC_SECTIONS tag is set to YES then the generated HTML
- # documentation will contain sections that can be hidden and shown after the
- # page has loaded.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_DYNAMIC_SECTIONS  = NO
- 
--# With HTML_INDEX_NUM_ENTRIES one can control the preferred number of
--# entries shown in the various tree structured indices initially; the user
--# can expand and collapse entries dynamically later on. Doxygen will expand
--# the tree to such a level that at most the specified number of entries are
--# visible (unless a fully collapsed tree already exceeds this amount).
--# So setting the number of entries 1 will produce a full collapsed tree by
--# default. 0 is a special value representing an infinite number of entries
--# and will result in a full expanded tree by default.
-+# With HTML_INDEX_NUM_ENTRIES one can control the preferred number of entries
-+# shown in the various tree structured indices initially; the user can expand
-+# and collapse entries dynamically later on. Doxygen will expand the tree to
-+# such a level that at most the specified number of entries are visible (unless
-+# a fully collapsed tree already exceeds this amount). So setting the number of
-+# entries 1 will produce a full collapsed tree by default. 0 is a special value
-+# representing an infinite number of entries and will result in a full expanded
-+# tree by default.
-+# Minimum value: 0, maximum value: 9999, default value: 100.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- HTML_INDEX_NUM_ENTRIES = 100
- 
--# If the GENERATE_DOCSET tag is set to YES, additional index files
--# will be generated that can be used as input for Apple's Xcode 3
--# integrated development environment, introduced with OSX 10.5 (Leopard).
--# To create a documentation set, doxygen will generate a Makefile in the
--# HTML output directory. Running make will produce the docset in that
--# directory and running "make install" will install the docset in
--# ~/Library/Developer/Shared/Documentation/DocSets so that Xcode will find
--# it at startup.
--# See http://developer.apple.com/tools/creatingdocsetswithdoxygen.html
-+# If the GENERATE_DOCSET tag is set to YES, additional index files will be
-+# generated that can be used as input for Apple's Xcode 3 integrated development
-+# environment (see: http://developer.apple.com/tools/xcode/), introduced with
-+# OSX 10.5 (Leopard). To create a documentation set, doxygen will generate a
-+# Makefile in the HTML output directory. Running make will produce the docset in
-+# that directory and running make install will install the docset in
-+# ~/Library/Developer/Shared/Documentation/DocSets so that Xcode will find it at
-+# startup. See http://developer.apple.com/tools/creatingdocsetswithdoxygen.html
- # for more information.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- GENERATE_DOCSET        = NO
- 
--# When GENERATE_DOCSET tag is set to YES, this tag determines the name of the
--# feed. A documentation feed provides an umbrella under which multiple
--# documentation sets from a single provider (such as a company or product suite)
--# can be grouped.
-+# This tag determines the name of the docset feed. A documentation feed provides
-+# an umbrella under which multiple documentation sets from a single provider
-+# (such as a company or product suite) can be grouped.
-+# The default value is: Doxygen generated docs.
-+# This tag requires that the tag GENERATE_DOCSET is set to YES.
- 
- DOCSET_FEEDNAME        = "Doxygen generated docs"
- 
--# When GENERATE_DOCSET tag is set to YES, this tag specifies a string that
--# should uniquely identify the documentation set bundle. This should be a
--# reverse domain-name style string, e.g. com.mycompany.MyDocSet. Doxygen
--# will append .docset to the name.
-+# This tag specifies a string that should uniquely identify the documentation
-+# set bundle. This should be a reverse domain-name style string, e.g.
-+# com.mycompany.MyDocSet. Doxygen will append .docset to the name.
-+# The default value is: org.doxygen.Project.
-+# This tag requires that the tag GENERATE_DOCSET is set to YES.
- 
- DOCSET_BUNDLE_ID       = org.doxygen.Project
- 
--# When GENERATE_PUBLISHER_ID tag specifies a string that should uniquely identify
-+# The DOCSET_PUBLISHER_ID tag specifies a string that should uniquely identify
- # the documentation publisher. This should be a reverse domain-name style
- # string, e.g. com.mycompany.MyDocSet.documentation.
-+# The default value is: org.doxygen.Publisher.
-+# This tag requires that the tag GENERATE_DOCSET is set to YES.
- 
- DOCSET_PUBLISHER_ID    = org.doxygen.Publisher
- 
--# The GENERATE_PUBLISHER_NAME tag identifies the documentation publisher.
-+# The DOCSET_PUBLISHER_NAME tag identifies the documentation publisher.
-+# The default value is: Publisher.
-+# This tag requires that the tag GENERATE_DOCSET is set to YES.
- 
- DOCSET_PUBLISHER_NAME  = Publisher
- 
--# If the GENERATE_HTMLHELP tag is set to YES, additional index files
--# will be generated that can be used as input for tools like the
--# Microsoft HTML help workshop to generate a compiled HTML help file (.chm)
--# of the generated HTML documentation.
-+# If the GENERATE_HTMLHELP tag is set to YES then doxygen generates three
-+# additional HTML index files: index.hhp, index.hhc, and index.hhk. The
-+# index.hhp is a project file that can be read by Microsoft's HTML Help Workshop
-+# (see: http://www.microsoft.com/en-us/download/details.aspx?id=21138) on
-+# Windows.
-+#
-+# The HTML Help Workshop contains a compiler that can convert all HTML output
-+# generated by doxygen into a single compiled HTML file (.chm). Compiled HTML
-+# files are now used as the Windows 98 help format, and will replace the old
-+# Windows help format (.hlp) on all Windows platforms in the future. Compressed
-+# HTML files also contain an index, a table of contents, and you can search for
-+# words in the documentation. The HTML workshop also contains a viewer for
-+# compressed HTML files.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- GENERATE_HTMLHELP      = NO
- 
--# If the GENERATE_HTMLHELP tag is set to YES, the CHM_FILE tag can
--# be used to specify the file name of the resulting .chm file. You
--# can add a path in front of the file if the result should not be
-+# The CHM_FILE tag can be used to specify the file name of the resulting .chm
-+# file. You can add a path in front of the file if the result should not be
- # written to the html output directory.
-+# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
- 
- CHM_FILE               =
- 
--# If the GENERATE_HTMLHELP tag is set to YES, the HHC_LOCATION tag can
--# be used to specify the location (absolute path including file name) of
--# the HTML help compiler (hhc.exe). If non-empty doxygen will try to run
--# the HTML help compiler on the generated index.hhp.
-+# The HHC_LOCATION tag can be used to specify the location (absolute path
-+# including file name) of the HTML help compiler ( hhc.exe). If non-empty
-+# doxygen will try to run the HTML help compiler on the generated index.hhp.
-+# The file has to be specified with full path.
-+# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
- 
- HHC_LOCATION           =
- 
--# If the GENERATE_HTMLHELP tag is set to YES, the GENERATE_CHI flag
--# controls if a separate .chi index file is generated (YES) or that
--# it should be included in the master .chm file (NO).
-+# The GENERATE_CHI flag controls if a separate .chi index file is generated (
-+# YES) or that it should be included in the master .chm file ( NO).
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
- 
- GENERATE_CHI           = NO
- 
--# If the GENERATE_HTMLHELP tag is set to YES, the CHM_INDEX_ENCODING
--# is used to encode HtmlHelp index (hhk), content (hhc) and project file
--# content.
-+# The CHM_INDEX_ENCODING is used to encode HtmlHelp index ( hhk), content ( hhc)
-+# and project file content.
-+# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
- 
- CHM_INDEX_ENCODING     =
- 
--# If the GENERATE_HTMLHELP tag is set to YES, the BINARY_TOC flag
--# controls whether a binary table of contents is generated (YES) or a
--# normal table of contents (NO) in the .chm file.
-+# The BINARY_TOC flag controls whether a binary table of contents is generated (
-+# YES) or a normal table of contents ( NO) in the .chm file. Furthermore it
-+# enables the Previous and Next buttons.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
- 
- BINARY_TOC             = NO
- 
--# The TOC_EXPAND flag can be set to YES to add extra items for group members
--# to the contents of the HTML help documentation and to the tree view.
-+# The TOC_EXPAND flag can be set to YES to add extra items for group members to
-+# the table of contents of the HTML help documentation and to the tree view.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
- 
- TOC_EXPAND             = NO
- 
- # If the GENERATE_QHP tag is set to YES and both QHP_NAMESPACE and
--# QHP_VIRTUAL_FOLDER are set, an additional index file will be generated
--# that can be used as input for Qt's qhelpgenerator to generate a
--# Qt Compressed Help (.qch) of the generated HTML documentation.
-+# QHP_VIRTUAL_FOLDER are set, an additional index file will be generated that
-+# can be used as input for Qt's qhelpgenerator to generate a Qt Compressed Help
-+# (.qch) of the generated HTML documentation.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- GENERATE_QHP           = NO
- 
--# If the QHG_LOCATION tag is specified, the QCH_FILE tag can
--# be used to specify the file name of the resulting .qch file.
--# The path specified is relative to the HTML output folder.
-+# If the QHG_LOCATION tag is specified, the QCH_FILE tag can be used to specify
-+# the file name of the resulting .qch file. The path specified is relative to
-+# the HTML output folder.
-+# This tag requires that the tag GENERATE_QHP is set to YES.
- 
- QCH_FILE               =
- 
--# The QHP_NAMESPACE tag specifies the namespace to use when generating
--# Qt Help Project output. For more information please see
--# http://doc.trolltech.com/qthelpproject.html#namespace
-+# The QHP_NAMESPACE tag specifies the namespace to use when generating Qt Help
-+# Project output. For more information please see Qt Help Project / Namespace
-+# (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#namespace).
-+# The default value is: org.doxygen.Project.
-+# This tag requires that the tag GENERATE_QHP is set to YES.
- 
- QHP_NAMESPACE          = org.doxygen.Project
- 
--# The QHP_VIRTUAL_FOLDER tag specifies the namespace to use when generating
--# Qt Help Project output. For more information please see
--# http://doc.trolltech.com/qthelpproject.html#virtual-folders
-+# The QHP_VIRTUAL_FOLDER tag specifies the namespace to use when generating Qt
-+# Help Project output. For more information please see Qt Help Project / Virtual
-+# Folders (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#virtual-
-+# folders).
-+# The default value is: doc.
-+# This tag requires that the tag GENERATE_QHP is set to YES.
- 
- QHP_VIRTUAL_FOLDER     = doc
- 
--# If QHP_CUST_FILTER_NAME is set, it specifies the name of a custom filter to
--# add. For more information please see
--# http://doc.trolltech.com/qthelpproject.html#custom-filters
-+# If the QHP_CUST_FILTER_NAME tag is set, it specifies the name of a custom
-+# filter to add. For more information please see Qt Help Project / Custom
-+# Filters (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#custom-
-+# filters).
-+# This tag requires that the tag GENERATE_QHP is set to YES.
- 
- QHP_CUST_FILTER_NAME   =
- 
--# The QHP_CUST_FILT_ATTRS tag specifies the list of the attributes of the
--# custom filter to add. For more information please see
--# <a href="http://doc.trolltech.com/qthelpproject.html#custom-filters">
--# Qt Help Project / Custom Filters</a>.
-+# The QHP_CUST_FILTER_ATTRS tag specifies the list of the attributes of the
-+# custom filter to add. For more information please see Qt Help Project / Custom
-+# Filters (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#custom-
-+# filters).
-+# This tag requires that the tag GENERATE_QHP is set to YES.
- 
- QHP_CUST_FILTER_ATTRS  =
- 
- # The QHP_SECT_FILTER_ATTRS tag specifies the list of the attributes this
--# project's
--# filter section matches.
--# <a href="http://doc.trolltech.com/qthelpproject.html#filter-attributes">
--# Qt Help Project / Filter Attributes</a>.
-+# project's filter section matches. Qt Help Project / Filter Attributes (see:
-+# http://qt-project.org/doc/qt-4.8/qthelpproject.html#filter-attributes).
-+# This tag requires that the tag GENERATE_QHP is set to YES.
- 
- QHP_SECT_FILTER_ATTRS  =
- 
--# If the GENERATE_QHP tag is set to YES, the QHG_LOCATION tag can
--# be used to specify the location of Qt's qhelpgenerator.
--# If non-empty doxygen will try to run qhelpgenerator on the generated
--# .qhp file.
-+# The QHG_LOCATION tag can be used to specify the location of Qt's
-+# qhelpgenerator. If non-empty doxygen will try to run qhelpgenerator on the
-+# generated .qhp file.
-+# This tag requires that the tag GENERATE_QHP is set to YES.
- 
- QHG_LOCATION           =
- 
--# If the GENERATE_ECLIPSEHELP tag is set to YES, additional index files
--#  will be generated, which together with the HTML files, form an Eclipse help
--# plugin. To install this plugin and make it available under the help contents
--# menu in Eclipse, the contents of the directory containing the HTML and XML
--# files needs to be copied into the plugins directory of eclipse. The name of
--# the directory within the plugins directory should be the same as
--# the ECLIPSE_DOC_ID value. After copying Eclipse needs to be restarted before
--# the help appears.
-+# If the GENERATE_ECLIPSEHELP tag is set to YES, additional index files will be
-+# generated, together with the HTML files, they form an Eclipse help plugin. To
-+# install this plugin and make it available under the help contents menu in
-+# Eclipse, the contents of the directory containing the HTML and XML files needs
-+# to be copied into the plugins directory of eclipse. The name of the directory
-+# within the plugins directory should be the same as the ECLIPSE_DOC_ID value.
-+# After copying Eclipse needs to be restarted before the help appears.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- GENERATE_ECLIPSEHELP   = NO
- 
--# A unique identifier for the eclipse help plugin. When installing the plugin
--# the directory name containing the HTML and XML files should also have
--# this name.
-+# A unique identifier for the Eclipse help plugin. When installing the plugin
-+# the directory name containing the HTML and XML files should also have this
-+# name. Each documentation set should have its own identifier.
-+# The default value is: org.doxygen.Project.
-+# This tag requires that the tag GENERATE_ECLIPSEHELP is set to YES.
- 
- ECLIPSE_DOC_ID         = org.doxygen.Project
- 
--# The DISABLE_INDEX tag can be used to turn on/off the condensed index (tabs)
--# at top of each HTML page. The value NO (the default) enables the index and
--# the value YES disables it. Since the tabs have the same information as the
--# navigation tree you can set this option to NO if you already set
--# GENERATE_TREEVIEW to YES.
-+# If you want full control over the layout of the generated HTML pages it might
-+# be necessary to disable the index and replace it with your own. The
-+# DISABLE_INDEX tag can be used to turn on/off the condensed index (tabs) at top
-+# of each HTML page. A value of NO enables the index and the value YES disables
-+# it. Since the tabs in the index contain the same information as the navigation
-+# tree, you can set this option to YES if you also set GENERATE_TREEVIEW to YES.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- DISABLE_INDEX          = YES
- 
- # The GENERATE_TREEVIEW tag is used to specify whether a tree-like index
--# structure should be generated to display hierarchical information.
--# If the tag value is set to YES, a side panel will be generated
--# containing a tree-like index structure (just like the one that
--# is generated for HTML Help). For this to work a browser that supports
--# JavaScript, DHTML, CSS and frames is required (i.e. any modern browser).
--# Windows users are probably better off using the HTML help feature.
--# Since the tree basically has the same information as the tab index you
--# could consider to set DISABLE_INDEX to NO when enabling this option.
-+# structure should be generated to display hierarchical information. If the tag
-+# value is set to YES, a side panel will be generated containing a tree-like
-+# index structure (just like the one that is generated for HTML Help). For this
-+# to work a browser that supports JavaScript, DHTML, CSS and frames is required
-+# (i.e. any modern browser). Windows users are probably better off using the
-+# HTML help feature. Via custom stylesheets (see HTML_EXTRA_STYLESHEET) one can
-+# further fine-tune the look of the index. As an example, the default style
-+# sheet generated by doxygen has an example that shows how to put an image at
-+# the root of the tree instead of the PROJECT_NAME. Since the tree basically has
-+# the same information as the tab index, you could consider setting
-+# DISABLE_INDEX to YES when enabling this option.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- GENERATE_TREEVIEW      = NO
- 
--# The ENUM_VALUES_PER_LINE tag can be used to set the number of enum values
--# (range [0,1..20]) that doxygen will group on one line in the generated HTML
--# documentation. Note that a value of 0 will completely suppress the enum
--# values from appearing in the overview section.
-+# The ENUM_VALUES_PER_LINE tag can be used to set the number of enum values that
-+# doxygen will group on one line in the generated HTML documentation.
-+#
-+# Note that a value of 0 will completely suppress the enum values from appearing
-+# in the overview section.
-+# Minimum value: 0, maximum value: 20, default value: 4.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- ENUM_VALUES_PER_LINE   = 4
- 
--# If the treeview is enabled (see GENERATE_TREEVIEW) then this tag can be
--# used to set the initial width (in pixels) of the frame in which the tree
--# is shown.
-+# If the treeview is enabled (see GENERATE_TREEVIEW) then this tag can be used
-+# to set the initial width (in pixels) of the frame in which the tree is shown.
-+# Minimum value: 0, maximum value: 1500, default value: 250.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- TREEVIEW_WIDTH         = 250
- 
--# When the EXT_LINKS_IN_WINDOW option is set to YES doxygen will open
--# links to external symbols imported via tag files in a separate window.
-+# When the EXT_LINKS_IN_WINDOW option is set to YES doxygen will open links to
-+# external symbols imported via tag files in a separate window.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- EXT_LINKS_IN_WINDOW    = NO
- 
--# Use this tag to change the font size of Latex formulas included
--# as images in the HTML documentation. The default is 10. Note that
--# when you change the font size after a successful doxygen run you need
--# to manually remove any form_*.png images from the HTML output directory
--# to force them to be regenerated.
-+# Use this tag to change the font size of LaTeX formulas included as images in
-+# the HTML documentation. When you change the font size after a successful
-+# doxygen run you need to manually remove any form_*.png images from the HTML
-+# output directory to force them to be regenerated.
-+# Minimum value: 8, maximum value: 50, default value: 10.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- FORMULA_FONTSIZE       = 10
- 
- # Use the FORMULA_TRANPARENT tag to determine whether or not the images
--# generated for formulas are transparent PNGs. Transparent PNGs are
--# not supported properly for IE 6.0, but are supported on all modern browsers.
--# Note that when changing this option you need to delete any form_*.png files
--# in the HTML output before the changes have effect.
-+# generated for formulas are transparent PNGs. Transparent PNGs are not
-+# supported properly for IE 6.0, but are supported on all modern browsers.
-+#
-+# Note that when changing this option you need to delete any form_*.png files in
-+# the HTML output directory before the changes have effect.
-+# The default value is: YES.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- FORMULA_TRANSPARENT    = YES
- 
--# Enable the USE_MATHJAX option to render LaTeX formulas using MathJax
--# (see http://www.mathjax.org) which uses client side Javascript for the
--# rendering instead of using prerendered bitmaps. Use this if you do not
--# have LaTeX installed or if you want to formulas look prettier in the HTML
--# output. When enabled you may also need to install MathJax separately and
--# configure the path to it using the MATHJAX_RELPATH option.
-+# Enable the USE_MATHJAX option to render LaTeX formulas using MathJax (see
-+# http://www.mathjax.org) which uses client side Javascript for the rendering
-+# instead of using prerendered bitmaps. Use this if you do not have LaTeX
-+# installed or if you want to formulas look prettier in the HTML output. When
-+# enabled you may also need to install MathJax separately and configure the path
-+# to it using the MATHJAX_RELPATH option.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- USE_MATHJAX            = NO
- 
--# When MathJax is enabled you need to specify the location relative to the
--# HTML output directory using the MATHJAX_RELPATH option. The destination
--# directory should contain the MathJax.js script. For instance, if the mathjax
--# directory is located at the same level as the HTML output directory, then
--# MATHJAX_RELPATH should be ../mathjax. The default value points to
--# the MathJax Content Delivery Network so you can quickly see the result without
--# installing MathJax.
--# However, it is strongly recommended to install a local
--# copy of MathJax from http://www.mathjax.org before deployment.
-+# When MathJax is enabled you can set the default output format to be used for
-+# the MathJax output. See the MathJax site (see:
-+# http://docs.mathjax.org/en/latest/output.html) for more details.
-+# Possible values are: HTML-CSS (which is slower, but has the best
-+# compatibility), NativeMML (i.e. MathML) and SVG.
-+# The default value is: HTML-CSS.
-+# This tag requires that the tag USE_MATHJAX is set to YES.
-+
-+MATHJAX_FORMAT         = HTML-CSS
-+
-+# When MathJax is enabled you need to specify the location relative to the HTML
-+# output directory using the MATHJAX_RELPATH option. The destination directory
-+# should contain the MathJax.js script. For instance, if the mathjax directory
-+# is located at the same level as the HTML output directory, then
-+# MATHJAX_RELPATH should be ../mathjax. The default value points to the MathJax
-+# Content Delivery Network so you can quickly see the result without installing
-+# MathJax. However, it is strongly recommended to install a local copy of
-+# MathJax from http://www.mathjax.org before deployment.
-+# The default value is: http://cdn.mathjax.org/mathjax/latest.
-+# This tag requires that the tag USE_MATHJAX is set to YES.
- 
- MATHJAX_RELPATH        = http://cdn.mathjax.org/mathjax/latest
- 
--# The MATHJAX_EXTENSIONS tag can be used to specify one or MathJax extension
--# names that should be enabled during MathJax rendering.
-+# The MATHJAX_EXTENSIONS tag can be used to specify one or more MathJax
-+# extension names that should be enabled during MathJax rendering. For example
-+# MATHJAX_EXTENSIONS = TeX/AMSmath TeX/AMSsymbols
-+# This tag requires that the tag USE_MATHJAX is set to YES.
- 
- MATHJAX_EXTENSIONS     =
- 
--# When the SEARCHENGINE tag is enabled doxygen will generate a search box
--# for the HTML output. The underlying search engine uses javascript
--# and DHTML and should work on any modern browser. Note that when using
--# HTML help (GENERATE_HTMLHELP), Qt help (GENERATE_QHP), or docsets
--# (GENERATE_DOCSET) there is already a search function so this one should
--# typically be disabled. For large projects the javascript based search engine
--# can be slow, then enabling SERVER_BASED_SEARCH may provide a better solution.
-+# The MATHJAX_CODEFILE tag can be used to specify a file with javascript pieces
-+# of code that will be used on startup of the MathJax code. See the MathJax site
-+# (see: http://docs.mathjax.org/en/latest/output.html) for more details. For an
-+# example see the documentation.
-+# This tag requires that the tag USE_MATHJAX is set to YES.
-+
-+MATHJAX_CODEFILE       =
-+
-+# When the SEARCHENGINE tag is enabled doxygen will generate a search box for
-+# the HTML output. The underlying search engine uses javascript and DHTML and
-+# should work on any modern browser. Note that when using HTML help
-+# (GENERATE_HTMLHELP), Qt help (GENERATE_QHP), or docsets (GENERATE_DOCSET)
-+# there is already a search function so this one should typically be disabled.
-+# For large projects the javascript based search engine can be slow, then
-+# enabling SERVER_BASED_SEARCH may provide a better solution. It is possible to
-+# search using the keyboard; to jump to the search box use <access key> + S
-+# (what the <access key> is depends on the OS and browser, but it is typically
-+# <CTRL>, <ALT>/<option>, or both). Inside the search box use the <cursor down
-+# key> to jump into the search results window, the results can be navigated
-+# using the <cursor keys>. Press <Enter> to select an item or <escape> to cancel
-+# the search. The filter options can be selected when the cursor is inside the
-+# search box by pressing <Shift>+<cursor down>. Also here use the <cursor keys>
-+# to select a filter and <Enter> or <escape> to activate or cancel the filter
-+# option.
-+# The default value is: YES.
-+# This tag requires that the tag GENERATE_HTML is set to YES.
- 
- SEARCHENGINE           = NO
- 
- # When the SERVER_BASED_SEARCH tag is enabled the search engine will be
--# implemented using a PHP enabled web server instead of at the web client
--# using Javascript. Doxygen will generate the search PHP script and index
--# file to put on the web server. The advantage of the server
--# based approach is that it scales better to large projects and allows
--# full text search. The disadvantages are that it is more difficult to setup
--# and does not have live searching capabilities.
-+# implemented using a web server instead of a web client using Javascript. There
-+# are two flavors of web server based searching depending on the EXTERNAL_SEARCH
-+# setting. When disabled, doxygen will generate a PHP script for searching and
-+# an index file used by the script. When EXTERNAL_SEARCH is enabled the indexing
-+# and searching needs to be provided by external tools. See the section
-+# "External Indexing and Searching" for details.
-+# The default value is: NO.
-+# This tag requires that the tag SEARCHENGINE is set to YES.
- 
- SERVER_BASED_SEARCH    = NO
- 
-+# When EXTERNAL_SEARCH tag is enabled doxygen will no longer generate the PHP
-+# script for searching. Instead the search results are written to an XML file
-+# which needs to be processed by an external indexer. Doxygen will invoke an
-+# external search engine pointed to by the SEARCHENGINE_URL option to obtain the
-+# search results.
-+#
-+# Doxygen ships with an example indexer ( doxyindexer) and search engine
-+# (doxysearch.cgi) which are based on the open source search engine library
-+# Xapian (see: http://xapian.org/).
-+#
-+# See the section "External Indexing and Searching" for details.
-+# The default value is: NO.
-+# This tag requires that the tag SEARCHENGINE is set to YES.
-+
-+EXTERNAL_SEARCH        = NO
-+
-+# The SEARCHENGINE_URL should point to a search engine hosted by a web server
-+# which will return the search results when EXTERNAL_SEARCH is enabled.
-+#
-+# Doxygen ships with an example indexer ( doxyindexer) and search engine
-+# (doxysearch.cgi) which are based on the open source search engine library
-+# Xapian (see: http://xapian.org/). See the section "External Indexing and
-+# Searching" for details.
-+# This tag requires that the tag SEARCHENGINE is set to YES.
-+
-+SEARCHENGINE_URL       =
-+
-+# When SERVER_BASED_SEARCH and EXTERNAL_SEARCH are both enabled the unindexed
-+# search data is written to a file for indexing by an external tool. With the
-+# SEARCHDATA_FILE tag the name of this file can be specified.
-+# The default file is: searchdata.xml.
-+# This tag requires that the tag SEARCHENGINE is set to YES.
-+
-+SEARCHDATA_FILE        = searchdata.xml
-+
-+# When SERVER_BASED_SEARCH and EXTERNAL_SEARCH are both enabled the
-+# EXTERNAL_SEARCH_ID tag can be used as an identifier for the project. This is
-+# useful in combination with EXTRA_SEARCH_MAPPINGS to search through multiple
-+# projects and redirect the results back to the right project.
-+# This tag requires that the tag SEARCHENGINE is set to YES.
-+
-+EXTERNAL_SEARCH_ID     =
-+
-+# The EXTRA_SEARCH_MAPPINGS tag can be used to enable searching through doxygen
-+# projects other than the one defined by this configuration file, but that are
-+# all added to the same external search index. Each project needs to have a
-+# unique id set via EXTERNAL_SEARCH_ID. The search mapping then maps the id of
-+# to a relative location where the documentation can be found. The format is:
-+# EXTRA_SEARCH_MAPPINGS = tagname1=loc1 tagname2=loc2 ...
-+# This tag requires that the tag SEARCHENGINE is set to YES.
-+
-+EXTRA_SEARCH_MAPPINGS  =
-+
- #---------------------------------------------------------------------------
--# configuration options related to the LaTeX output
-+# Configuration options related to the LaTeX output
- #---------------------------------------------------------------------------
- 
--# If the GENERATE_LATEX tag is set to YES (the default) Doxygen will
--# generate Latex output.
-+# If the GENERATE_LATEX tag is set to YES doxygen will generate LaTeX output.
-+# The default value is: YES.
- 
- GENERATE_LATEX         = YES
- 
--# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put.
--# If a relative path is entered the value of OUTPUT_DIRECTORY will be
--# put in front of it. If left blank `latex' will be used as the default path.
-+# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. If a
-+# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-+# it.
-+# The default directory is: latex.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- LATEX_OUTPUT           = latex
- 
- # The LATEX_CMD_NAME tag can be used to specify the LaTeX command name to be
--# invoked. If left blank `latex' will be used as the default command name.
--# Note that when enabling USE_PDFLATEX this option is only used for
--# generating bitmaps for formulas in the HTML output, but not in the
--# Makefile that is written to the output directory.
-+# invoked.
-+#
-+# Note that when enabling USE_PDFLATEX this option is only used for generating
-+# bitmaps for formulas in the HTML output, but not in the Makefile that is
-+# written to the output directory.
-+# The default file is: latex.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- LATEX_CMD_NAME         = latex
- 
--# The MAKEINDEX_CMD_NAME tag can be used to specify the command name to
--# generate index for LaTeX. If left blank `makeindex' will be used as the
--# default command name.
-+# The MAKEINDEX_CMD_NAME tag can be used to specify the command name to generate
-+# index for LaTeX.
-+# The default file is: makeindex.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- MAKEINDEX_CMD_NAME     = makeindex
- 
--# If the COMPACT_LATEX tag is set to YES Doxygen generates more compact
--# LaTeX documents. This may be useful for small projects and may help to
--# save some trees in general.
-+# If the COMPACT_LATEX tag is set to YES doxygen generates more compact LaTeX
-+# documents. This may be useful for small projects and may help to save some
-+# trees in general.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- COMPACT_LATEX          = NO
- 
--# The PAPER_TYPE tag can be used to set the paper type that is used
--# by the printer. Possible values are: a4, letter, legal and
--# executive. If left blank a4wide will be used.
-+# The PAPER_TYPE tag can be used to set the paper type that is used by the
-+# printer.
-+# Possible values are: a4 (210 x 297 mm), letter (8.5 x 11 inches), legal (8.5 x
-+# 14 inches) and executive (7.25 x 10.5 inches).
-+# The default value is: a4.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- PAPER_TYPE             = a4wide
- 
--# The EXTRA_PACKAGES tag can be to specify one or more names of LaTeX
--# packages that should be included in the LaTeX output.
-+# The EXTRA_PACKAGES tag can be used to specify one or more LaTeX package names
-+# that should be included in the LaTeX output. To get the times font for
-+# instance you can specify
-+# EXTRA_PACKAGES=times
-+# If left blank no extra packages will be included.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- EXTRA_PACKAGES         =
- 
--# The LATEX_HEADER tag can be used to specify a personal LaTeX header for
--# the generated latex document. The header should contain everything until
--# the first chapter. If it is left blank doxygen will generate a
--# standard header. Notice: only use this tag if you know what you are doing!
-+# The LATEX_HEADER tag can be used to specify a personal LaTeX header for the
-+# generated LaTeX document. The header should contain everything until the first
-+# chapter. If it is left blank doxygen will generate a standard header. See
-+# section "Doxygen usage" for information on how to let doxygen write the
-+# default header to a separate file.
-+#
-+# Note: Only use a user-defined header if you know what you are doing! The
-+# following commands have a special meaning inside the header: $title,
-+# $datetime, $date, $doxygenversion, $projectname, $projectnumber. Doxygen will
-+# replace them by respectively the title of the page, the current date and time,
-+# only the current date, the version number of doxygen, the project name (see
-+# PROJECT_NAME), or the project number (see PROJECT_NUMBER).
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- LATEX_HEADER           =
- 
--# The LATEX_FOOTER tag can be used to specify a personal LaTeX footer for
--# the generated latex document. The footer should contain everything after
--# the last chapter. If it is left blank doxygen will generate a
--# standard footer. Notice: only use this tag if you know what you are doing!
-+# The LATEX_FOOTER tag can be used to specify a personal LaTeX footer for the
-+# generated LaTeX document. The footer should contain everything after the last
-+# chapter. If it is left blank doxygen will generate a standard footer.
-+#
-+# Note: Only use a user-defined footer if you know what you are doing!
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- LATEX_FOOTER           =
- 
--# If the PDF_HYPERLINKS tag is set to YES, the LaTeX that is generated
--# is prepared for conversion to pdf (using ps2pdf). The pdf file will
--# contain links (just like the HTML output) instead of page references
--# This makes the output suitable for online browsing using a pdf viewer.
-+# The LATEX_EXTRA_FILES tag can be used to specify one or more extra images or
-+# other source files which should be copied to the LATEX_OUTPUT output
-+# directory. Note that the files will be copied as-is; there are no commands or
-+# markers available.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
-+
-+LATEX_EXTRA_FILES      =
-+
-+# If the PDF_HYPERLINKS tag is set to YES, the LaTeX that is generated is
-+# prepared for conversion to PDF (using ps2pdf or pdflatex). The PDF file will
-+# contain links (just like the HTML output) instead of page references. This
-+# makes the output suitable for online browsing using a PDF viewer.
-+# The default value is: YES.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- PDF_HYPERLINKS         = YES
- 
--# If the USE_PDFLATEX tag is set to YES, pdflatex will be used instead of
--# plain latex in the generated Makefile. Set this option to YES to get a
-+# If the LATEX_PDFLATEX tag is set to YES, doxygen will use pdflatex to generate
-+# the PDF file directly from the LaTeX files. Set this option to YES to get a
- # higher quality PDF documentation.
-+# The default value is: YES.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- USE_PDFLATEX           = NO
- 
--# If the LATEX_BATCHMODE tag is set to YES, doxygen will add the \\batchmode.
--# command to the generated LaTeX files. This will instruct LaTeX to keep
--# running if errors occur, instead of asking the user for help.
--# This option is also used when generating formulas in HTML.
-+# If the LATEX_BATCHMODE tag is set to YES, doxygen will add the \batchmode
-+# command to the generated LaTeX files. This will instruct LaTeX to keep running
-+# if errors occur, instead of asking the user for help. This option is also used
-+# when generating formulas in HTML.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- LATEX_BATCHMODE        = NO
- 
--# If LATEX_HIDE_INDICES is set to YES then doxygen will not
--# include the index chapters (such as File Index, Compound Index, etc.)
--# in the output.
-+# If the LATEX_HIDE_INDICES tag is set to YES then doxygen will not include the
-+# index chapters (such as File Index, Compound Index, etc.) in the output.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- LATEX_HIDE_INDICES     = NO
- 
--# If LATEX_SOURCE_CODE is set to YES then doxygen will include
--# source code with syntax highlighting in the LaTeX output.
--# Note that which sources are shown also depends on other settings
--# such as SOURCE_BROWSER.
-+# If the LATEX_SOURCE_CODE tag is set to YES then doxygen will include source
-+# code with syntax highlighting in the LaTeX output.
-+#
-+# Note that which sources are shown also depends on other settings such as
-+# SOURCE_BROWSER.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- LATEX_SOURCE_CODE      = NO
- 
- # The LATEX_BIB_STYLE tag can be used to specify the style to use for the
--# bibliography, e.g. plainnat, or ieeetr. The default style is "plain". See
--# http://en.wikipedia.org/wiki/BibTeX for more info.
-+# bibliography, e.g. plainnat, or ieeetr. See
-+# http://en.wikipedia.org/wiki/BibTeX and \cite for more info.
-+# The default value is: plain.
-+# This tag requires that the tag GENERATE_LATEX is set to YES.
- 
- LATEX_BIB_STYLE        = plain
- 
- #---------------------------------------------------------------------------
--# configuration options related to the RTF output
-+# Configuration options related to the RTF output
- #---------------------------------------------------------------------------
- 
--# If the GENERATE_RTF tag is set to YES Doxygen will generate RTF output
--# The RTF output is optimized for Word 97 and may not look very pretty with
--# other RTF readers or editors.
-+# If the GENERATE_RTF tag is set to YES doxygen will generate RTF output. The
-+# RTF output is optimized for Word 97 and may not look too pretty with other RTF
-+# readers/editors.
-+# The default value is: NO.
- 
- GENERATE_RTF           = NO
- 
--# The RTF_OUTPUT tag is used to specify where the RTF docs will be put.
--# If a relative path is entered the value of OUTPUT_DIRECTORY will be
--# put in front of it. If left blank `rtf' will be used as the default path.
-+# The RTF_OUTPUT tag is used to specify where the RTF docs will be put. If a
-+# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-+# it.
-+# The default directory is: rtf.
-+# This tag requires that the tag GENERATE_RTF is set to YES.
- 
- RTF_OUTPUT             = rtf
- 
--# If the COMPACT_RTF tag is set to YES Doxygen generates more compact
--# RTF documents. This may be useful for small projects and may help to
--# save some trees in general.
-+# If the COMPACT_RTF tag is set to YES doxygen generates more compact RTF
-+# documents. This may be useful for small projects and may help to save some
-+# trees in general.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_RTF is set to YES.
- 
- COMPACT_RTF            = NO
- 
--# If the RTF_HYPERLINKS tag is set to YES, the RTF that is generated
--# will contain hyperlink fields. The RTF file will
--# contain links (just like the HTML output) instead of page references.
--# This makes the output suitable for online browsing using WORD or other
--# programs which support those fields.
--# Note: wordpad (write) and others do not support links.
-+# If the RTF_HYPERLINKS tag is set to YES, the RTF that is generated will
-+# contain hyperlink fields. The RTF file will contain links (just like the HTML
-+# output) instead of page references. This makes the output suitable for online
-+# browsing using Word or some other Word compatible readers that support those
-+# fields.
-+#
-+# Note: WordPad (write) and others do not support links.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_RTF is set to YES.
- 
- RTF_HYPERLINKS         = NO
- 
--# Load style sheet definitions from file. Syntax is similar to doxygen's
--# config file, i.e. a series of assignments. You only have to provide
--# replacements, missing definitions are set to their default value.
-+# Load stylesheet definitions from file. Syntax is similar to doxygen's config
-+# file, i.e. a series of assignments. You only have to provide replacements,
-+# missing definitions are set to their default value.
-+#
-+# See also section "Doxygen usage" for information on how to generate the
-+# default style sheet that doxygen normally uses.
-+# This tag requires that the tag GENERATE_RTF is set to YES.
- 
- RTF_STYLESHEET_FILE    =
- 
--# Set optional variables used in the generation of an rtf document.
--# Syntax is similar to doxygen's config file.
-+# Set optional variables used in the generation of an RTF document. Syntax is
-+# similar to doxygen's config file. A template extensions file can be generated
-+# using doxygen -e rtf extensionFile.
-+# This tag requires that the tag GENERATE_RTF is set to YES.
- 
- RTF_EXTENSIONS_FILE    =
- 
- #---------------------------------------------------------------------------
--# configuration options related to the man page output
-+# Configuration options related to the man page output
- #---------------------------------------------------------------------------
- 
--# If the GENERATE_MAN tag is set to YES (the default) Doxygen will
--# generate man pages
-+# If the GENERATE_MAN tag is set to YES doxygen will generate man pages for
-+# classes and files.
-+# The default value is: NO.
- 
- GENERATE_MAN           = YES
- 
--# The MAN_OUTPUT tag is used to specify where the man pages will be put.
--# If a relative path is entered the value of OUTPUT_DIRECTORY will be
--# put in front of it. If left blank `man' will be used as the default path.
-+# The MAN_OUTPUT tag is used to specify where the man pages will be put. If a
-+# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-+# it. A directory man3 will be created inside the directory specified by
-+# MAN_OUTPUT.
-+# The default directory is: man.
-+# This tag requires that the tag GENERATE_MAN is set to YES.
- 
- MAN_OUTPUT             = man
- 
--# The MAN_EXTENSION tag determines the extension that is added to
--# the generated man pages (default is the subroutine's section .3)
-+# The MAN_EXTENSION tag determines the extension that is added to the generated
-+# man pages. In case the manual section does not start with a number, the number
-+# 3 is prepended. The dot (.) at the beginning of the MAN_EXTENSION tag is
-+# optional.
-+# The default value is: .3.
-+# This tag requires that the tag GENERATE_MAN is set to YES.
- 
- MAN_EXTENSION          = .3
- 
--# If the MAN_LINKS tag is set to YES and Doxygen generates man output,
--# then it will generate one additional man file for each entity
--# documented in the real man page(s). These additional files
--# only source the real man page, but without them the man command
--# would be unable to find the correct page. The default is NO.
-+# The MAN_SUBDIR tag determines the name of the directory created within
-+# MAN_OUTPUT in which the man pages are placed. If defaults to man followed by
-+# MAN_EXTENSION with the initial . removed.
-+# This tag requires that the tag GENERATE_MAN is set to YES.
-+
-+MAN_SUBDIR             =
-+
-+# If the MAN_LINKS tag is set to YES and doxygen generates man output, then it
-+# will generate one additional man file for each entity documented in the real
-+# man page(s). These additional files only source the real man page, but without
-+# them the man command would be unable to find the correct page.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_MAN is set to YES.
- 
- MAN_LINKS              = YES
- 
- #---------------------------------------------------------------------------
--# configuration options related to the XML output
-+# Configuration options related to the XML output
- #---------------------------------------------------------------------------
- 
--# If the GENERATE_XML tag is set to YES Doxygen will
--# generate an XML file that captures the structure of
--# the code including all documentation.
-+# If the GENERATE_XML tag is set to YES doxygen will generate an XML file that
-+# captures the structure of the code including all documentation.
-+# The default value is: NO.
- 
- GENERATE_XML           = NO
- 
--# The XML_OUTPUT tag is used to specify where the XML pages will be put.
--# If a relative path is entered the value of OUTPUT_DIRECTORY will be
--# put in front of it. If left blank `xml' will be used as the default path.
-+# The XML_OUTPUT tag is used to specify where the XML pages will be put. If a
-+# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
-+# it.
-+# The default directory is: xml.
-+# This tag requires that the tag GENERATE_XML is set to YES.
- 
- XML_OUTPUT             = xml
- 
--# The XML_SCHEMA tag can be used to specify an XML schema,
--# which can be used by a validating XML parser to check the
--# syntax of the XML files.
--
--XML_SCHEMA             =
--
--# The XML_DTD tag can be used to specify an XML DTD,
--# which can be used by a validating XML parser to check the
--# syntax of the XML files.
--
--XML_DTD                =
--
--# If the XML_PROGRAMLISTING tag is set to YES Doxygen will
--# dump the program listings (including syntax highlighting
--# and cross-referencing information) to the XML output. Note that
--# enabling this will significantly increase the size of the XML output.
-+# If the XML_PROGRAMLISTING tag is set to YES doxygen will dump the program
-+# listings (including syntax highlighting and cross-referencing information) to
-+# the XML output. Note that enabling this will significantly increase the size
-+# of the XML output.
-+# The default value is: YES.
-+# This tag requires that the tag GENERATE_XML is set to YES.
- 
- XML_PROGRAMLISTING     = YES
- 
- #---------------------------------------------------------------------------
--# configuration options for the AutoGen Definitions output
-+# Configuration options related to the DOCBOOK output
- #---------------------------------------------------------------------------
- 
--# If the GENERATE_AUTOGEN_DEF tag is set to YES Doxygen will
--# generate an AutoGen Definitions (see autogen.sf.net) file
--# that captures the structure of the code including all
--# documentation. Note that this feature is still experimental
--# and incomplete at the moment.
-+# If the GENERATE_DOCBOOK tag is set to YES doxygen will generate Docbook files
-+# that can be used to generate PDF.
-+# The default value is: NO.
-+
-+GENERATE_DOCBOOK       = NO
-+
-+# The DOCBOOK_OUTPUT tag is used to specify where the Docbook pages will be put.
-+# If a relative path is entered the value of OUTPUT_DIRECTORY will be put in
-+# front of it.
-+# The default directory is: docbook.
-+# This tag requires that the tag GENERATE_DOCBOOK is set to YES.
-+
-+DOCBOOK_OUTPUT         = docbook
-+
-+#---------------------------------------------------------------------------
-+# Configuration options for the AutoGen Definitions output
-+#---------------------------------------------------------------------------
-+
-+# If the GENERATE_AUTOGEN_DEF tag is set to YES doxygen will generate an AutoGen
-+# Definitions (see http://autogen.sf.net) file that captures the structure of
-+# the code including all documentation. Note that this feature is still
-+# experimental and incomplete at the moment.
-+# The default value is: NO.
- 
- GENERATE_AUTOGEN_DEF   = NO
- 
- #---------------------------------------------------------------------------
--# configuration options related to the Perl module output
-+# Configuration options related to the Perl module output
- #---------------------------------------------------------------------------
- 
--# If the GENERATE_PERLMOD tag is set to YES Doxygen will
--# generate a Perl module file that captures the structure of
--# the code including all documentation. Note that this
--# feature is still experimental and incomplete at the
--# moment.
-+# If the GENERATE_PERLMOD tag is set to YES doxygen will generate a Perl module
-+# file that captures the structure of the code including all documentation.
-+#
-+# Note that this feature is still experimental and incomplete at the moment.
-+# The default value is: NO.
- 
- GENERATE_PERLMOD       = NO
- 
--# If the PERLMOD_LATEX tag is set to YES Doxygen will generate
--# the necessary Makefile rules, Perl scripts and LaTeX code to be able
--# to generate PDF and DVI output from the Perl module output.
-+# If the PERLMOD_LATEX tag is set to YES doxygen will generate the necessary
-+# Makefile rules, Perl scripts and LaTeX code to be able to generate PDF and DVI
-+# output from the Perl module output.
-+# The default value is: NO.
-+# This tag requires that the tag GENERATE_PERLMOD is set to YES.
- 
- PERLMOD_LATEX          = NO
- 
--# If the PERLMOD_PRETTY tag is set to YES the Perl module output will be
--# nicely formatted so it can be parsed by a human reader.
--# This is useful
--# if you want to understand what is going on.
--# On the other hand, if this
--# tag is set to NO the size of the Perl module output will be much smaller
--# and Perl will parse it just the same.
-+# If the PERLMOD_PRETTY tag is set to YES the Perl module output will be nicely
-+# formatted so it can be parsed by a human reader. This is useful if you want to
-+# understand what is going on. On the other hand, if this tag is set to NO the
-+# size of the Perl module output will be much smaller and Perl will parse it
-+# just the same.
-+# The default value is: YES.
-+# This tag requires that the tag GENERATE_PERLMOD is set to YES.
- 
- PERLMOD_PRETTY         = YES
- 
--# The names of the make variables in the generated doxyrules.make file
--# are prefixed with the string contained in PERLMOD_MAKEVAR_PREFIX.
--# This is useful so different doxyrules.make files included by the same
--# Makefile don't overwrite each other's variables.
-+# The names of the make variables in the generated doxyrules.make file are
-+# prefixed with the string contained in PERLMOD_MAKEVAR_PREFIX. This is useful
-+# so different doxyrules.make files included by the same Makefile don't
-+# overwrite each other's variables.
-+# This tag requires that the tag GENERATE_PERLMOD is set to YES.
- 
- PERLMOD_MAKEVAR_PREFIX =
- 
-@@ -1464,106 +1889,128 @@
- # Configuration options related to the preprocessor
- #---------------------------------------------------------------------------
- 
--# If the ENABLE_PREPROCESSING tag is set to YES (the default) Doxygen will
--# evaluate all C-preprocessor directives found in the sources and include
--# files.
-+# If the ENABLE_PREPROCESSING tag is set to YES doxygen will evaluate all
-+# C-preprocessor directives found in the sources and include files.
-+# The default value is: YES.
- 
- ENABLE_PREPROCESSING   = YES
- 
--# If the MACRO_EXPANSION tag is set to YES Doxygen will expand all macro
--# names in the source code. If set to NO (the default) only conditional
--# compilation will be performed. Macro expansion can be done in a controlled
--# way by setting EXPAND_ONLY_PREDEF to YES.
-+# If the MACRO_EXPANSION tag is set to YES doxygen will expand all macro names
-+# in the source code. If set to NO only conditional compilation will be
-+# performed. Macro expansion can be done in a controlled way by setting
-+# EXPAND_ONLY_PREDEF to YES.
-+# The default value is: NO.
-+# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
- 
- MACRO_EXPANSION        = NO
- 
--# If the EXPAND_ONLY_PREDEF and MACRO_EXPANSION tags are both set to YES
--# then the macro expansion is limited to the macros specified with the
--# PREDEFINED and EXPAND_AS_DEFINED tags.
-+# If the EXPAND_ONLY_PREDEF and MACRO_EXPANSION tags are both set to YES then
-+# the macro expansion is limited to the macros specified with the PREDEFINED and
-+# EXPAND_AS_DEFINED tags.
-+# The default value is: NO.
-+# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
- 
- EXPAND_ONLY_PREDEF     = NO
- 
--# If the SEARCH_INCLUDES tag is set to YES (the default) the includes files
--# pointed to by INCLUDE_PATH will be searched when a #include is found.
-+# If the SEARCH_INCLUDES tag is set to YES the includes files in the
-+# INCLUDE_PATH will be searched if a #include is found.
-+# The default value is: YES.
-+# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
- 
- SEARCH_INCLUDES        = YES
- 
- # The INCLUDE_PATH tag can be used to specify one or more directories that
--# contain include files that are not input files but should be processed by
--# the preprocessor.
-+# contain include files that are not input files but should be processed by the
-+# preprocessor.
-+# This tag requires that the tag SEARCH_INCLUDES is set to YES.
- 
- INCLUDE_PATH           =
- 
- # You can use the INCLUDE_FILE_PATTERNS tag to specify one or more wildcard
- # patterns (like *.h and *.hpp) to filter out the header-files in the
--# directories. If left blank, the patterns specified with FILE_PATTERNS will
--# be used.
-+# directories. If left blank, the patterns specified with FILE_PATTERNS will be
-+# used.
-+# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
- 
- INCLUDE_FILE_PATTERNS  =
- 
--# The PREDEFINED tag can be used to specify one or more macro names that
--# are defined before the preprocessor is started (similar to the -D option of
--# gcc). The argument of the tag is a list of macros of the form: name
--# or name=definition (no spaces). If the definition and the = are
--# omitted =1 is assumed. To prevent a macro definition from being
--# undefined via #undef or recursively expanded use the := operator
--# instead of the = operator.
-+# The PREDEFINED tag can be used to specify one or more macro names that are
-+# defined before the preprocessor is started (similar to the -D option of e.g.
-+# gcc). The argument of the tag is a list of macros of the form: name or
-+# name=definition (no spaces). If the definition and the "=" are omitted, "=1"
-+# is assumed. To prevent a macro definition from being undefined via #undef or
-+# recursively expanded use the := operator instead of the = operator.
-+# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
- 
- PREDEFINED             = APOP_NO_VARIADIC
- 
--# If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then
--# this tag can be used to specify a list of macro names that should be expanded.
--# The macro definition that is found in the sources will be used.
--# Use the PREDEFINED tag if you want to use a different macro definition that
--# overrules the definition found in the source code.
-+# If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then this
-+# tag can be used to specify a list of macro names that should be expanded. The
-+# macro definition that is found in the sources will be used. Use the PREDEFINED
-+# tag if you want to use a different macro definition that overrules the
-+# definition found in the source code.
-+# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
- 
- EXPAND_AS_DEFINED      =
- 
--# If the SKIP_FUNCTION_MACROS tag is set to YES (the default) then
--# doxygen's preprocessor will remove all references to function-like macros
--# that are alone on a line, have an all uppercase name, and do not end with a
--# semicolon, because these will confuse the parser if not removed.
-+# If the SKIP_FUNCTION_MACROS tag is set to YES then doxygen's preprocessor will
-+# remove all references to function-like macros that are alone on a line, have
-+# an all uppercase name, and do not end with a semicolon. Such function macros
-+# are typically used for boiler-plate code, and will confuse the parser if not
-+# removed.
-+# The default value is: YES.
-+# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
- 
- SKIP_FUNCTION_MACROS   = NO
- 
- #---------------------------------------------------------------------------
--# Configuration::additions related to external references
-+# Configuration options related to external references
- #---------------------------------------------------------------------------
- 
--# The TAGFILES option can be used to specify one or more tagfiles. For each
--# tag file the location of the external documentation should be added. The
--# format of a tag file without this location is as follows:
--#
-+# The TAGFILES tag can be used to specify one or more tag files. For each tag
-+# file the location of the external documentation should be added. The format of
-+# a tag file without this location is as follows:
- # TAGFILES = file1 file2 ...
- # Adding location for the tag files is done as follows:
--#
- # TAGFILES = file1=loc1 "file2 = loc2" ...
--# where "loc1" and "loc2" can be relative or absolute paths
--# or URLs. Note that each tag file must have a unique name (where the name does
--# NOT include the path). If a tag file is not located in the directory in which
--# doxygen is run, you must also specify the path to the tagfile here.
-+# where loc1 and loc2 can be relative or absolute paths or URLs. See the
-+# section "Linking to external documentation" for more information about the use
-+# of tag files.
-+# Note: Each tag file must have a unique name (where the name does NOT include
-+# the path). If a tag file is not located in the directory in which doxygen is
-+# run, you must also specify the path to the tagfile here.
- 
- TAGFILES               =
- 
--# When a file name is specified after GENERATE_TAGFILE, doxygen will create
--# a tag file that is based on the input files it reads.
-+# When a file name is specified after GENERATE_TAGFILE, doxygen will create a
-+# tag file that is based on the input files it reads. See section "Linking to
-+# external documentation" for more information about the usage of tag files.
- 
- GENERATE_TAGFILE       =
- 
--# If the ALLEXTERNALS tag is set to YES all external classes will be listed
--# in the class index. If set to NO only the inherited external classes
--# will be listed.
-+# If the ALLEXTERNALS tag is set to YES all external class will be listed in the
-+# class index. If set to NO only the inherited external classes will be listed.
-+# The default value is: NO.
- 
- ALLEXTERNALS           = NO
- 
--# If the EXTERNAL_GROUPS tag is set to YES all external groups will be listed
--# in the modules index. If set to NO, only the current project's groups will
--# be listed.
-+# If the EXTERNAL_GROUPS tag is set to YES all external groups will be listed in
-+# the modules index. If set to NO, only the current project's groups will be
-+# listed.
-+# The default value is: YES.
- 
- EXTERNAL_GROUPS        = YES
- 
-+# If the EXTERNAL_PAGES tag is set to YES all external pages will be listed in
-+# the related pages index. If set to NO, only the current project's pages will
-+# be listed.
-+# The default value is: YES.
-+
-+EXTERNAL_PAGES         = YES
-+
- # The PERL_PATH should be the absolute path and name of the perl script
--# interpreter (i.e. the result of `which perl').
-+# interpreter (i.e. the result of 'which perl').
-+# The default file (with absolute path) is: /usr/bin/perl.
- 
- PERL_PATH              = /usr/bin/perl
- 
-@@ -1571,222 +2018,295 @@
- # Configuration options related to the dot tool
- #---------------------------------------------------------------------------
- 
--# If the CLASS_DIAGRAMS tag is set to YES (the default) Doxygen will
--# generate a inheritance diagram (in HTML, RTF and LaTeX) for classes with base
--# or super classes. Setting the tag to NO turns the diagrams off. Note that
--# this option also works with HAVE_DOT disabled, but it is recommended to
--# install and use dot, since it yields more powerful graphs.
-+# If the CLASS_DIAGRAMS tag is set to YES doxygen will generate a class diagram
-+# (in HTML and LaTeX) for classes with base or super classes. Setting the tag to
-+# NO turns the diagrams off. Note that this option also works with HAVE_DOT
-+# disabled, but it is recommended to install and use dot, since it yields more
-+# powerful graphs.
-+# The default value is: YES.
- 
- CLASS_DIAGRAMS         = NO
- 
- # You can define message sequence charts within doxygen comments using the \msc
--# command. Doxygen will then run the mscgen tool (see
--# http://www.mcternan.me.uk/mscgen/) to produce the chart and insert it in the
-+# command. Doxygen will then run the mscgen tool (see:
-+# http://www.mcternan.me.uk/mscgen/)) to produce the chart and insert it in the
- # documentation. The MSCGEN_PATH tag allows you to specify the directory where
- # the mscgen tool resides. If left empty the tool is assumed to be found in the
- # default search path.
- 
- MSCGEN_PATH            =
- 
--# If set to YES, the inheritance and collaboration graphs will hide
--# inheritance and usage relations if the target is undocumented
--# or is not a class.
-+# You can include diagrams made with dia in doxygen documentation. Doxygen will
-+# then run dia to produce the diagram and insert it in the documentation. The
-+# DIA_PATH tag allows you to specify the directory where the dia binary resides.
-+# If left empty dia is assumed to be found in the default search path.
-+
-+DIA_PATH               =
-+
-+# If set to YES, the inheritance and collaboration graphs will hide inheritance
-+# and usage relations if the target is undocumented or is not a class.
-+# The default value is: YES.
- 
- HIDE_UNDOC_RELATIONS   = YES
- 
- # If you set the HAVE_DOT tag to YES then doxygen will assume the dot tool is
--# available from the path. This tool is part of Graphviz, a graph visualization
--# toolkit from AT&T and Lucent Bell Labs. The other options in this section
--# have no effect if this option is set to NO (the default)
-+# available from the path. This tool is part of Graphviz (see:
-+# http://www.graphviz.org/), a graph visualization toolkit from AT&T and Lucent
-+# Bell Labs. The other options in this section have no effect if this option is
-+# set to NO
-+# The default value is: YES.
- 
- HAVE_DOT               = NO
- 
--# The DOT_NUM_THREADS specifies the number of dot invocations doxygen is
--# allowed to run in parallel. When set to 0 (the default) doxygen will
--# base this on the number of processors available in the system. You can set it
--# explicitly to a value larger than 0 to get control over the balance
--# between CPU load and processing speed.
-+# The DOT_NUM_THREADS specifies the number of dot invocations doxygen is allowed
-+# to run in parallel. When set to 0 doxygen will base this on the number of
-+# processors available in the system. You can set it explicitly to a value
-+# larger than 0 to get control over the balance between CPU load and processing
-+# speed.
-+# Minimum value: 0, maximum value: 32, default value: 0.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOT_NUM_THREADS        = 0
- 
--# By default doxygen will use the Helvetica font for all dot files that
--# doxygen generates. When you want a differently looking font you can specify
--# the font name using DOT_FONTNAME. You need to make sure dot is able to find
--# the font, which can be done by putting it in a standard location or by setting
--# the DOTFONTPATH environment variable or by setting DOT_FONTPATH to the
--# directory containing the font.
-+# When you want a differently looking font n the dot files that doxygen
-+# generates you can specify the font name using DOT_FONTNAME. You need to make
-+# sure dot is able to find the font, which can be done by putting it in a
-+# standard location or by setting the DOTFONTPATH environment variable or by
-+# setting DOT_FONTPATH to the directory containing the font.
-+# The default value is: Helvetica.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOT_FONTNAME           = Helvetica
- 
--# The DOT_FONTSIZE tag can be used to set the size of the font of dot graphs.
--# The default size is 10pt.
-+# The DOT_FONTSIZE tag can be used to set the size (in points) of the font of
-+# dot graphs.
-+# Minimum value: 4, maximum value: 24, default value: 10.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOT_FONTSIZE           = 10
- 
--# By default doxygen will tell dot to use the Helvetica font.
--# If you specify a different font using DOT_FONTNAME you can use DOT_FONTPATH to
--# set the path where dot can find it.
-+# By default doxygen will tell dot to use the default font as specified with
-+# DOT_FONTNAME. If you specify a different font using DOT_FONTNAME you can set
-+# the path where dot can find it using this tag.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOT_FONTPATH           =
- 
--# If the CLASS_GRAPH and HAVE_DOT tags are set to YES then doxygen
--# will generate a graph for each documented class showing the direct and
--# indirect inheritance relations. Setting this tag to YES will force the
--# CLASS_DIAGRAMS tag to NO.
-+# If the CLASS_GRAPH tag is set to YES then doxygen will generate a graph for
-+# each documented class showing the direct and indirect inheritance relations.
-+# Setting this tag to YES will force the CLASS_DIAGRAMS tag to NO.
-+# The default value is: YES.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- CLASS_GRAPH            = NO
- 
--# If the COLLABORATION_GRAPH and HAVE_DOT tags are set to YES then doxygen
--# will generate a graph for each documented class showing the direct and
--# indirect implementation dependencies (inheritance, containment, and
--# class references variables) of the class with other documented classes.
-+# If the COLLABORATION_GRAPH tag is set to YES then doxygen will generate a
-+# graph for each documented class showing the direct and indirect implementation
-+# dependencies (inheritance, containment, and class references variables) of the
-+# class with other documented classes.
-+# The default value is: YES.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- COLLABORATION_GRAPH    = NO
- 
--# If the GROUP_GRAPHS and HAVE_DOT tags are set to YES then doxygen
--# will generate a graph for groups, showing the direct groups dependencies
-+# If the GROUP_GRAPHS tag is set to YES then doxygen will generate a graph for
-+# groups, showing the direct groups dependencies.
-+# The default value is: YES.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- GROUP_GRAPHS           = YES
- 
- # If the UML_LOOK tag is set to YES doxygen will generate inheritance and
- # collaboration diagrams in a style similar to the OMG's Unified Modeling
- # Language.
-+# The default value is: NO.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- UML_LOOK               = NO
- 
--# If the UML_LOOK tag is enabled, the fields and methods are shown inside
--# the class node. If there are many fields or methods and many nodes the
--# graph may become too big to be useful. The UML_LIMIT_NUM_FIELDS
--# threshold limits the number of items for each type to make the size more
--# managable. Set this to 0 for no limit. Note that the threshold may be
--# exceeded by 50% before the limit is enforced.
-+# If the UML_LOOK tag is enabled, the fields and methods are shown inside the
-+# class node. If there are many fields or methods and many nodes the graph may
-+# become too big to be useful. The UML_LIMIT_NUM_FIELDS threshold limits the
-+# number of items for each type to make the size more manageable. Set this to 0
-+# for no limit. Note that the threshold may be exceeded by 50% before the limit
-+# is enforced. So when you set the threshold to 10, up to 15 fields may appear,
-+# but if the number exceeds 15, the total amount of fields shown is limited to
-+# 10.
-+# Minimum value: 0, maximum value: 100, default value: 10.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- UML_LIMIT_NUM_FIELDS   = 10
- 
--# If set to YES, the inheritance and collaboration graphs will show the
--# relations between templates and their instances.
-+# If the TEMPLATE_RELATIONS tag is set to YES then the inheritance and
-+# collaboration graphs will show the relations between templates and their
-+# instances.
-+# The default value is: NO.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- TEMPLATE_RELATIONS     = NO
- 
--# If the ENABLE_PREPROCESSING, SEARCH_INCLUDES, INCLUDE_GRAPH, and HAVE_DOT
--# tags are set to YES then doxygen will generate a graph for each documented
--# file showing the direct and indirect include dependencies of the file with
--# other documented files.
-+# If the INCLUDE_GRAPH, ENABLE_PREPROCESSING and SEARCH_INCLUDES tags are set to
-+# YES then doxygen will generate a graph for each documented file showing the
-+# direct and indirect include dependencies of the file with other documented
-+# files.
-+# The default value is: YES.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- INCLUDE_GRAPH          = NO
- 
--# If the ENABLE_PREPROCESSING, SEARCH_INCLUDES, INCLUDED_BY_GRAPH, and
--# HAVE_DOT tags are set to YES then doxygen will generate a graph for each
--# documented header file showing the documented files that directly or
--# indirectly include this file.
-+# If the INCLUDED_BY_GRAPH, ENABLE_PREPROCESSING and SEARCH_INCLUDES tags are
-+# set to YES then doxygen will generate a graph for each documented file showing
-+# the direct and indirect include dependencies of the file with other documented
-+# files.
-+# The default value is: YES.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- INCLUDED_BY_GRAPH      = NO
- 
--# If the CALL_GRAPH and HAVE_DOT options are set to YES then
--# doxygen will generate a call dependency graph for every global function
--# or class method. Note that enabling this option will significantly increase
--# the time of a run. So in most cases it will be better to enable call graphs
--# for selected functions only using the \callgraph command.
-+# If the CALL_GRAPH tag is set to YES then doxygen will generate a call
-+# dependency graph for every global function or class method.
-+#
-+# Note that enabling this option will significantly increase the time of a run.
-+# So in most cases it will be better to enable call graphs for selected
-+# functions only using the \callgraph command.
-+# The default value is: NO.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- CALL_GRAPH             = NO
- 
--# If the CALLER_GRAPH and HAVE_DOT tags are set to YES then
--# doxygen will generate a caller dependency graph for every global function
--# or class method. Note that enabling this option will significantly increase
--# the time of a run. So in most cases it will be better to enable caller
--# graphs for selected functions only using the \callergraph command.
-+# If the CALLER_GRAPH tag is set to YES then doxygen will generate a caller
-+# dependency graph for every global function or class method.
-+#
-+# Note that enabling this option will significantly increase the time of a run.
-+# So in most cases it will be better to enable caller graphs for selected
-+# functions only using the \callergraph command.
-+# The default value is: NO.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- CALLER_GRAPH           = NO
- 
--# If the GRAPHICAL_HIERARCHY and HAVE_DOT tags are set to YES then doxygen
--# will generate a graphical hierarchy of all classes instead of a textual one.
-+# If the GRAPHICAL_HIERARCHY tag is set to YES then doxygen will graphical
-+# hierarchy of all classes instead of a textual one.
-+# The default value is: YES.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- GRAPHICAL_HIERARCHY    = YES
- 
--# If the DIRECTORY_GRAPH and HAVE_DOT tags are set to YES
--# then doxygen will show the dependencies a directory has on other directories
--# in a graphical way. The dependency relations are determined by the #include
--# relations between the files in the directories.
-+# If the DIRECTORY_GRAPH tag is set to YES then doxygen will show the
-+# dependencies a directory has on other directories in a graphical way. The
-+# dependency relations are determined by the #include relations between the
-+# files in the directories.
-+# The default value is: YES.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DIRECTORY_GRAPH        = YES
- 
- # The DOT_IMAGE_FORMAT tag can be used to set the image format of the images
--# generated by dot. Possible values are svg, png, jpg, or gif.
--# If left blank png will be used. If you choose svg you need to set
--# HTML_FILE_EXTENSION to xhtml in order to make the SVG files
--# visible in IE 9+ (other browsers do not have this requirement).
-+# generated by dot.
-+# Note: If you choose svg you need to set HTML_FILE_EXTENSION to xhtml in order
-+# to make the SVG files visible in IE 9+ (other browsers do not have this
-+# requirement).
-+# Possible values are: png, png:cairo, png:cairo:cairo, png:cairo:gd, png:gd,
-+# png:gd:gd, jpg, jpg:cairo, jpg:cairo:gd, jpg:gd, jpg:gd:gd, gif, gif:cairo,
-+# gif:cairo:gd, gif:gd, gif:gd:gd and svg.
-+# The default value is: png.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOT_IMAGE_FORMAT       = png
- 
- # If DOT_IMAGE_FORMAT is set to svg, then this option can be set to YES to
- # enable generation of interactive SVG images that allow zooming and panning.
--# Note that this requires a modern browser other than Internet Explorer.
--# Tested and working are Firefox, Chrome, Safari, and Opera. For IE 9+ you
--# need to set HTML_FILE_EXTENSION to xhtml in order to make the SVG files
--# visible. Older versions of IE do not have SVG support.
-+#
-+# Note that this requires a modern browser other than Internet Explorer. Tested
-+# and working are Firefox, Chrome, Safari, and Opera.
-+# Note: For IE 9+ you need to set HTML_FILE_EXTENSION to xhtml in order to make
-+# the SVG files visible. Older versions of IE do not have SVG support.
-+# The default value is: NO.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- INTERACTIVE_SVG        = NO
- 
--# The tag DOT_PATH can be used to specify the path where the dot tool can be
-+# The DOT_PATH tag can be used to specify the path where the dot tool can be
- # found. If left blank, it is assumed the dot tool can be found in the path.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOT_PATH               =
- 
- # The DOTFILE_DIRS tag can be used to specify one or more directories that
--# contain dot files that are included in the documentation (see the
--# \dotfile command).
-+# contain dot files that are included in the documentation (see the \dotfile
-+# command).
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOTFILE_DIRS           =
- 
- # The MSCFILE_DIRS tag can be used to specify one or more directories that
--# contain msc files that are included in the documentation (see the
--# \mscfile command).
-+# contain msc files that are included in the documentation (see the \mscfile
-+# command).
- 
- MSCFILE_DIRS           =
- 
--# The DOT_GRAPH_MAX_NODES tag can be used to set the maximum number of
--# nodes that will be shown in the graph. If the number of nodes in a graph
--# becomes larger than this value, doxygen will truncate the graph, which is
--# visualized by representing a node as a red box. Note that doxygen if the
--# number of direct children of the root node in a graph is already larger than
--# DOT_GRAPH_MAX_NODES then the graph will not be shown at all. Also note
--# that the size of a graph can be further restricted by MAX_DOT_GRAPH_DEPTH.
-+# The DIAFILE_DIRS tag can be used to specify one or more directories that
-+# contain dia files that are included in the documentation (see the \diafile
-+# command).
-+
-+DIAFILE_DIRS           =
-+
-+# The DOT_GRAPH_MAX_NODES tag can be used to set the maximum number of nodes
-+# that will be shown in the graph. If the number of nodes in a graph becomes
-+# larger than this value, doxygen will truncate the graph, which is visualized
-+# by representing a node as a red box. Note that doxygen if the number of direct
-+# children of the root node in a graph is already larger than
-+# DOT_GRAPH_MAX_NODES then the graph will not be shown at all. Also note that
-+# the size of a graph can be further restricted by MAX_DOT_GRAPH_DEPTH.
-+# Minimum value: 0, maximum value: 10000, default value: 50.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOT_GRAPH_MAX_NODES    = 50
- 
--# The MAX_DOT_GRAPH_DEPTH tag can be used to set the maximum depth of the
--# graphs generated by dot. A depth value of 3 means that only nodes reachable
--# from the root by following a path via at most 3 edges will be shown. Nodes
--# that lay further from the root node will be omitted. Note that setting this
--# option to 1 or 2 may greatly reduce the computation time needed for large
--# code bases. Also note that the size of a graph can be further restricted by
-+# The MAX_DOT_GRAPH_DEPTH tag can be used to set the maximum depth of the graphs
-+# generated by dot. A depth value of 3 means that only nodes reachable from the
-+# root by following a path via at most 3 edges will be shown. Nodes that lay
-+# further from the root node will be omitted. Note that setting this option to 1
-+# or 2 may greatly reduce the computation time needed for large code bases. Also
-+# note that the size of a graph can be further restricted by
- # DOT_GRAPH_MAX_NODES. Using a depth of 0 means no depth restriction.
-+# Minimum value: 0, maximum value: 1000, default value: 0.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- MAX_DOT_GRAPH_DEPTH    = 0
- 
- # Set the DOT_TRANSPARENT tag to YES to generate images with a transparent
--# background. This is disabled by default, because dot on Windows does not
--# seem to support this out of the box. Warning: Depending on the platform used,
--# enabling this option may lead to badly anti-aliased labels on the edges of
--# a graph (i.e. they become hard to read).
-+# background. This is disabled by default, because dot on Windows does not seem
-+# to support this out of the box.
-+#
-+# Warning: Depending on the platform used, enabling this option may lead to
-+# badly anti-aliased labels on the edges of a graph (i.e. they become hard to
-+# read).
-+# The default value is: NO.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOT_TRANSPARENT        = YES
- 
- # Set the DOT_MULTI_TARGETS tag to YES allow dot to generate multiple output
- # files in one run (i.e. multiple -o and -T options on the command line). This
--# makes dot run faster, but since only newer versions of dot (>1.8.10)
--# support this, this feature is disabled by default.
-+# makes dot run faster, but since only newer versions of dot (>1.8.10) support
-+# this, this feature is disabled by default.
-+# The default value is: NO.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOT_MULTI_TARGETS      = NO
- 
--# If the GENERATE_LEGEND tag is set to YES (the default) Doxygen will
--# generate a legend page explaining the meaning of the various boxes and
--# arrows in the dot generated graphs.
-+# If the GENERATE_LEGEND tag is set to YES doxygen will generate a legend page
-+# explaining the meaning of the various boxes and arrows in the dot generated
-+# graphs.
-+# The default value is: YES.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- GENERATE_LEGEND        = YES
- 
--# If the DOT_CLEANUP tag is set to YES (the default) Doxygen will
--# remove the intermediate dot files that are used to generate
--# the various graphs.
-+# If the DOT_CLEANUP tag is set to YES doxygen will remove the intermediate dot
-+# files that are used to generate the various graphs.
-+# The default value is: YES.
-+# This tag requires that the tag HAVE_DOT is set to YES.
- 
- DOT_CLEANUP            = YES
diff --git a/debian/patches/upstream-update-library_version.patch b/debian/patches/upstream-update-library_version.patch
deleted file mode 100644
index 28dcb8c..0000000
--- a/debian/patches/upstream-update-library_version.patch
+++ /dev/null
@@ -1,28 +0,0 @@
-Description: update library version
- Update the library version wrt to the Libtool Manual (section 7.3)
- and the related material; meant to be submitted to the upstream maintainer.
-Origin: debian
-Author: Jerome Benoit <calculus at rezozer.net>
-Last-Update: 2014-12-16
-
---- a/Makefile.am
-+++ b/Makefile.am
-@@ -8,7 +8,9 @@
- AM_CFLAGS = -g -Wall -O3
- 
- ## Library versioning (C:R:A == current:revision:age)
--LIBAPOPHENIA_LT_VERSION = 0:0:0
-+## 0.999b 0:0:0
-+## 0.999c 1:0:0
-+LIBAPOPHENIA_LT_VERSION = 1:0:0
- 
- SUBDIRS = transform model . cmd tests docs eg
- 
---- a/apophenia.map
-+++ b/apophenia.map
-@@ -1,4 +1,4 @@
--LIBAPOPHENIA_0.0.0 {
-+LIBAPOPHENIA_1.0.0 {
- global:
- apop_opts;
- apop_name_alloc;
diff --git a/debian/rules b/debian/rules
index 548ec77..fb00b4f 100755
--- a/debian/rules
+++ b/debian/rules
@@ -1,14 +1,14 @@
 #!/usr/bin/make -f
 
-## inspired from gsl material
+## inspired from mpfr material
 ifneq (,$(findstring noopt,$(DEB_BUILD_OPTIONS)))
 	CFLAGS += -O0
-else ifeq ($(DEB_HOST_ARCH), m68k)
-	CFLAGS += -O2
 else ifeq ($(DEB_HOST_ARCH), alpha)
-	CFLAGS += -O2 -mieee
+	CFLAGS += -mieee
+else ifeq ($(DEB_HOST_ARCH),sha4)
+	CFLAGS += -mieee
 else
-	CFLAGS += -O3
+	CFLAGS := $(subst -O2,-O3,$(CFLAGS))
 endif
 
 export ACLOCAL_PATH=/usr/share/gnulib/m4
@@ -17,23 +17,21 @@ default:
 	@uscan --no-conf --dehs --report || true
 
 %:
-	dh $@ --with autoreconf
+	dh $@ --with autoreconf --builddirectory=_build --parallel
+
+override_dh_auto_configure:
+	dh_auto_configure -- --enable-maintainer-mode --enable-extended-tests
 
 override_dh_auto_build-indep:
-	$(MAKE) -C docs doc
+	$(MAKE) -C _build/docs doc
 
 override_dh_auto_test-indep:
 
-override_dh_auto_configure:
-	dh_auto_configure -- --enable-maintainer-mode
-
-override_dh_auto_test:
-ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
-	$(MAKE) -C tests check || cat tests/test-suite.log
-endif
-
 override_dh_strip:
-	dh_strip --dbg-package=libapophenia1-dbg
+	dh_strip --dbg-package=libapophenia2-dbg
+
+override_dh_compress-indep:
+	dh_compress -X.pdf -Xexamples
 
 get-orig-source:
 	uscan --no-conf --download-current-version --compression xz --verbose

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/apophenia.git



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