[adios] 61/207: refresh for 1.5.0

Alastair McKinstry mckinstry at moszumanska.debian.org
Fri Jun 12 06:04:37 UTC 2015


This is an automated email from the git hooks/post-receive script.

mckinstry pushed a commit to branch master
in repository adios.

commit 27c49f5d51a88e6c37bf483941484067a6c329d0
Author: Alastair McKinstry <mckinstry at debian.org>
Date:   Mon Dec 9 15:47:49 2013 +0000

    refresh for 1.5.0
---
 debian/patches/python3.patch | 147 ++++++++++++++++++++-----------------------
 1 file changed, 68 insertions(+), 79 deletions(-)

diff --git a/debian/patches/python3.patch b/debian/patches/python3.patch
index d2b786b..69bf1f3 100644
--- a/debian/patches/python3.patch
+++ b/debian/patches/python3.patch
@@ -1,12 +1,12 @@
 Author: Alastair McKinstry <mckinstry at debian.org>
 Description: Make the python code python2-3 agnostic.
-Last-Updated:2013-10-25
+Last-Updated:2013-12-09
 Forwarded: no
 
-Index: adios-1.4.1/utils/skel/bin/skel
+Index: adios-1.5.0/utils/skel/bin/skel
 ===================================================================
---- adios-1.4.1.orig/utils/skel/bin/skel	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/bin/skel	2013-10-24 14:22:33.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/bin/skel	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/bin/skel	2013-12-09 15:26:24.000000000 +0000
 @@ -1,5 +1,7 @@
  #!/usr/bin/env python
  
@@ -44,10 +44,10 @@ Index: adios-1.4.1/utils/skel/bin/skel
  
  
  if __name__ == "__main__":
-Index: adios-1.4.1/utils/skel/bin/skel_extract.py
+Index: adios-1.5.0/utils/skel/bin/skel_extract.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/bin/skel_extract.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/bin/skel_extract.py	2013-10-24 14:28:42.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/bin/skel_extract.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/bin/skel_extract.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,5 +1,6 @@
  #!/usr/bin/env python
  
@@ -55,7 +55,7 @@ Index: adios-1.4.1/utils/skel/bin/skel_extract.py
  import argparse
  import xml.dom.minidom
  import sys
-@@ -45,7 +46,7 @@
+@@ -46,7 +47,7 @@
      # check the selected fields
      for field in selected_fields:
          if not field in keys:
@@ -64,18 +64,18 @@ Index: adios-1.4.1/utils/skel/bin/skel_extract.py
              return
  
      #Print the header
-Index: adios-1.4.1/utils/skel/lib/skelconf.py
+Index: adios-1.5.0/utils/skel/lib/skelconf.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/lib/skelconf.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/skelconf.py	2013-10-24 14:28:28.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/lib/skelconf.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/lib/skelconf.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,5 +1,5 @@
 +from __future__ import absolute_import, division, print_function, unicode_literals
  import xml.dom.minidom
 -
  import skel_settings
+ import skel_have_adios_timing
  
- 
-@@ -9,7 +9,7 @@
+@@ -10,7 +10,7 @@
  
          nodes = doc.childNodes
          if (nodes.length != 1):
@@ -84,19 +84,19 @@ Index: adios-1.4.1/utils/skel/lib/skelconf.py
              raise SystemExit
          self.config_node = nodes[0]
  
-Index: adios-1.4.1/utils/gpp/ad_config.py
+Index: adios-1.5.0/utils/gpp/ad_config.py
 ===================================================================
---- adios-1.4.1.orig/utils/gpp/ad_config.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/gpp/ad_config.py	2013-10-24 14:37:04.000000000 +0100
+--- adios-1.5.0.orig/utils/gpp/ad_config.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/gpp/ad_config.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,3 +1,4 @@
 +from __future__ import absolute_import, division, print_function, unicode_literals
  import xml.dom.minidom
  import type_mapper
  
-Index: adios-1.4.1/utils/gpp/gpp.py
+Index: adios-1.5.0/utils/gpp/gpp.py
 ===================================================================
---- adios-1.4.1.orig/utils/gpp/gpp.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/gpp/gpp.py	2013-10-24 14:36:54.000000000 +0100
+--- adios-1.5.0.orig/utils/gpp/gpp.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/gpp/gpp.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,5 +1,5 @@
  #!/usr/bin/env python
 -
@@ -104,10 +104,10 @@ Index: adios-1.4.1/utils/gpp/gpp.py
  import sys
  import os
  
-Index: adios-1.4.1/utils/skel/lib/adios.py
+Index: adios-1.5.0/utils/skel/lib/adios.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/lib/adios.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/adios.py	2013-10-24 17:40:35.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/lib/adios.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/lib/adios.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,5 +1,5 @@
 +from __future__ import print_function
  import xml.dom.minidom
@@ -142,10 +142,10 @@ Index: adios-1.4.1/utils/skel/lib/adios.py
              cleandims = []
              for d in dims:
  
-Index: adios-1.4.1/utils/skel/lib/argparse.py
+Index: adios-1.5.0/utils/skel/lib/argparse.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/lib/argparse.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/argparse.py	2013-10-24 17:37:47.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/lib/argparse.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/lib/argparse.py	2013-12-09 15:26:24.000000000 +0000
 @@ -81,7 +81,6 @@
      'ZERO_OR_MORE',
  ]
@@ -154,21 +154,10 @@ Index: adios-1.4.1/utils/skel/lib/argparse.py
  import copy as _copy
  import os as _os
  import re as _re
-Index: adios-1.4.1/utils/skel/lib/skel_cat.py
-===================================================================
---- adios-1.4.1.orig/utils/skel/lib/skel_cat.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/skel_cat.py	2013-10-24 14:34:48.000000000 +0100
-@@ -1,5 +1,5 @@
- #!/usr/bin/env python
--
-+from __future__ import absolute_import, division, print_function, unicode_literals
- import argparse
- import os
- import os.path
-Index: adios-1.4.1/utils/skel/lib/skel_install.py
+Index: adios-1.5.0/utils/skel/lib/skel_install.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/lib/skel_install.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/skel_install.py	2013-10-24 14:34:11.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/lib/skel_install.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/lib/skel_install.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,5 +1,5 @@
  #!/usr/bin/env python
 -
@@ -176,10 +165,10 @@ Index: adios-1.4.1/utils/skel/lib/skel_install.py
  import skel_settings
  
  def main(argv=None):
-Index: adios-1.4.1/utils/skel/lib/skel_makefile.py
+Index: adios-1.5.0/utils/skel/lib/skel_makefile.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/lib/skel_makefile.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/skel_makefile.py	2013-10-24 15:03:13.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/lib/skel_makefile.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/lib/skel_makefile.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,5 +1,7 @@
  #!/usr/bin/env python
  
@@ -201,20 +190,20 @@ Index: adios-1.4.1/utils/skel/lib/skel_makefile.py
          generate_makefiles_fortran (params)
  
  
-Index: adios-1.4.1/utils/skel/lib/skel_params.py
+Index: adios-1.5.0/utils/skel/lib/skel_params.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/lib/skel_params.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/skel_params.py	2013-10-24 14:33:23.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/lib/skel_params.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/lib/skel_params.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,4 +1,5 @@
  #!/usr/bin/env python
 +from __future__ import absolute_import, division, print_function, unicode_literals
  import sys
  import os
  import argparse
-Index: adios-1.4.1/utils/skel/lib/skel_settings.py
+Index: adios-1.5.0/utils/skel/lib/skel_settings.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/lib/skel_settings.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/skel_settings.py	2013-10-24 15:04:44.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/lib/skel_settings.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/lib/skel_settings.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,5 +1,5 @@
  #!/usr/bin/env python
 -
@@ -233,7 +222,7 @@ Index: adios-1.4.1/utils/skel/lib/skel_settings.py
                  continue
              self.settings_dict[split_line[0]] = split_line[1]
  
-@@ -53,7 +53,7 @@
+@@ -55,7 +55,7 @@
      if not os.path.exists (skel_settings_dir_name):
          bindir = os.path.dirname (sys.argv[0])
          shutil.copytree (bindir + '/../etc/skel', skel_settings_dir_name)
@@ -242,17 +231,17 @@ Index: adios-1.4.1/utils/skel/lib/skel_settings.py
  
  
  def main(argv=None):
-Index: adios-1.4.1/utils/skel/lib/skel_source.py
+Index: adios-1.5.0/utils/skel/lib/skel_source.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/lib/skel_source.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/skel_source.py	2013-10-24 15:10:36.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/lib/skel_source.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/lib/skel_source.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,4 +1,5 @@
  #!/usr/bin/env python
 +from __future__ import absolute_import, division, print_function, unicode_literals
  import sys
  import os
  import argparse
-@@ -82,25 +83,25 @@
+@@ -83,25 +84,25 @@
          # same program var (as is done by genarray)
          c_file.write ('\n\n// Scalar declarations')
          declarations = set()
@@ -282,7 +271,7 @@ Index: adios-1.4.1/utils/skel/lib/skel_source.py
              c_file.write (adios.cFormatter.get_initialization (v, params.get_group (g.get_name() ) ) )
  
          if measure.use_sleep_before_open():
-@@ -213,7 +214,7 @@
+@@ -230,7 +231,7 @@
          # free the array memory
          c_file.write ('\n\n// Free the arrays')
          frees = set()
@@ -291,7 +280,7 @@ Index: adios-1.4.1/utils/skel/lib/skel_source.py
              frees.add ('\nfree (' + v.get_gwrite() + ');')
  
          for f in frees:
-@@ -290,7 +291,7 @@
+@@ -307,7 +308,7 @@
          # same program var (as is done by genarray)
          f_file.write ('\n\n! Scalar declarations')
          declarations = set()
@@ -300,7 +289,7 @@ Index: adios-1.4.1/utils/skel/lib/skel_source.py
              declarations.add (adios.fortranFormatter.get_declaration (v, params.get_group (g.get_name() ) ) )
  
          for d in declarations:
-@@ -298,7 +299,7 @@
+@@ -315,7 +316,7 @@
  
          f_file.write ('\n\n! Array declarations')
          declarations = set()
@@ -309,7 +298,7 @@ Index: adios-1.4.1/utils/skel/lib/skel_source.py
              declarations.add (adios.fortranFormatter.get_declaration (v, params.get_group (g.get_name() ) ) )
  
          for d in declarations:
-@@ -328,13 +329,13 @@
+@@ -345,13 +346,13 @@
          # For now, just do the numerical values first, then come back and do the more
          # complicated ones. This won't cover something like a depends on b, b depends on c,
          # but it will work for the moment
@@ -325,7 +314,7 @@ Index: adios-1.4.1/utils/skel/lib/skel_source.py
              #split at the spaces, just print the ones where the third element is a number
              init_str = adios.fortranFormatter.get_initialization (v, params.get_group (g.get_name() ) )
              if not init_str.split (None, 2)[2].isdigit():
-@@ -343,7 +344,7 @@
+@@ -360,7 +361,7 @@
          f_file.write ('\n\n! Initialize the arrays')
  
  		# And the vector initializations
@@ -334,7 +323,7 @@ Index: adios-1.4.1/utils/skel/lib/skel_source.py
              f_file.write (adios.fortranFormatter.get_initialization (v, params.get_group (g.get_name() ) ) )
  
  
-@@ -527,7 +528,7 @@
+@@ -545,7 +546,7 @@
          # same program var (as is done by genarray)
          c_file.write ('\n\n// Scalar declarations')
          declarations = set()
@@ -343,7 +332,7 @@ Index: adios-1.4.1/utils/skel/lib/skel_source.py
              declarations.add (adios.cFormatter.get_declaration (v, params.get_group (g.get_name() ) ) )
  
          for d in declarations:
-@@ -535,7 +536,7 @@
+@@ -553,7 +554,7 @@
  
          c_file.write ('\n\n// Array declarations')
          declarations = set()
@@ -352,7 +341,7 @@ Index: adios-1.4.1/utils/skel/lib/skel_source.py
              declarations.add (adios.cFormatter.get_declaration (v, params.get_group (g.get_name() ) ) )
  
          for d in declarations:
-@@ -612,7 +613,7 @@
+@@ -630,7 +631,7 @@
          # free the array memory
          c_file.write ('\n\n// Free the arrays')
          frees = set()
@@ -361,10 +350,10 @@ Index: adios-1.4.1/utils/skel/lib/skel_source.py
              frees.add ('\nfree (' + v.get_gwrite() + ');')
  
          for f in frees:
-Index: adios-1.4.1/utils/skel/lib/skel_submit.py
+Index: adios-1.5.0/utils/skel/lib/skel_submit.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/lib/skel_submit.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/skel_submit.py	2013-10-24 14:33:44.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/lib/skel_submit.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/lib/skel_submit.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,5 +1,5 @@
  #!/usr/bin/env python
 -
@@ -372,10 +361,10 @@ Index: adios-1.4.1/utils/skel/lib/skel_submit.py
  import argparse
  import os
  
-Index: adios-1.4.1/utils/skel/lib/skel_xml.py
+Index: adios-1.5.0/utils/skel/lib/skel_xml.py
 ===================================================================
---- adios-1.4.1.orig/utils/skel/lib/skel_xml.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/utils/skel/lib/skel_xml.py	2013-10-24 14:36:39.000000000 +0100
+--- adios-1.5.0.orig/utils/skel/lib/skel_xml.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/utils/skel/lib/skel_xml.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,5 +1,6 @@
  #!/usr/bin/env python
  
@@ -383,20 +372,20 @@ Index: adios-1.4.1/utils/skel/lib/skel_xml.py
  import argparse
  import xml.dom.minidom
  
-Index: adios-1.4.1/wrappers/numpy/example/ncdf2bp.py
+Index: adios-1.5.0/wrappers/numpy/example/ncdf2bp.py
 ===================================================================
---- adios-1.4.1.orig/wrappers/numpy/example/ncdf2bp.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/wrappers/numpy/example/ncdf2bp.py	2013-10-24 14:31:53.000000000 +0100
+--- adios-1.5.0.orig/wrappers/numpy/example/ncdf2bp.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/wrappers/numpy/example/ncdf2bp.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,4 +1,5 @@
  #!/usr/bin/env python
 +from __future__ import absolute_import, division, print_function, unicode_literals
  from adios import *
  from scipy.io import netcdf
  import numpy as np
-Index: adios-1.4.1/wrappers/numpy/test/adios_noxml_test.py
+Index: adios-1.5.0/wrappers/numpy/test/adios_noxml_test.py
 ===================================================================
---- adios-1.4.1.orig/wrappers/numpy/test/adios_noxml_test.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/wrappers/numpy/test/adios_noxml_test.py	2013-10-24 15:01:36.000000000 +0100
+--- adios-1.5.0.orig/wrappers/numpy/test/adios_noxml_test.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/wrappers/numpy/test/adios_noxml_test.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,4 +1,5 @@
  #!/usr/bin/env python
 +from __future__ import absolute_import, division, print_function, unicode_literals
@@ -412,10 +401,10 @@ Index: adios-1.4.1/wrappers/numpy/test/adios_noxml_test.py
  set_group_size(fd, groupsize)
  write_int(fd, "NX", NX)
  write_int(fd, "size", size)
-Index: adios-1.4.1/wrappers/numpy/test/adios_read_test.py
+Index: adios-1.5.0/wrappers/numpy/test/adios_read_test.py
 ===================================================================
---- adios-1.4.1.orig/wrappers/numpy/test/adios_read_test.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/wrappers/numpy/test/adios_read_test.py	2013-10-24 15:01:06.000000000 +0100
+--- adios-1.5.0.orig/wrappers/numpy/test/adios_read_test.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/wrappers/numpy/test/adios_read_test.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,4 +1,5 @@
  #!/usr/bin/env python
 +
@@ -430,10 +419,10 @@ Index: adios-1.4.1/wrappers/numpy/test/adios_read_test.py
 +print(v.read())
  
  f.close()
-Index: adios-1.4.1/wrappers/numpy/test/adios_write_test.py
+Index: adios-1.5.0/wrappers/numpy/test/adios_write_test.py
 ===================================================================
---- adios-1.4.1.orig/wrappers/numpy/test/adios_write_test.py	2013-10-24 12:34:17.000000000 +0100
-+++ adios-1.4.1/wrappers/numpy/test/adios_write_test.py	2013-10-24 14:59:45.000000000 +0100
+--- adios-1.5.0.orig/wrappers/numpy/test/adios_write_test.py	2013-12-09 15:26:24.000000000 +0000
++++ adios-1.5.0/wrappers/numpy/test/adios_write_test.py	2013-12-09 15:26:24.000000000 +0000
 @@ -1,4 +1,5 @@
  #!/usr/bin/env python
 +from __future__ import absolute_import, division, print_function, unicode_literals

-- 
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