[adios] 184/207: Merge branch 'upstream 1.8.0'
Alastair McKinstry
mckinstry at moszumanska.debian.org
Fri Jun 12 06:04:57 UTC 2015
This is an automated email from the git hooks/post-receive script.
mckinstry pushed a commit to branch master
in repository adios.
commit 59dcf32e777342e99989eec3894b7f9951509ddc
Merge: 8bdf7f4 9d57782
Author: Alastair McKinstry <mckinstry at debian.org>
Date: Thu Jan 8 22:04:26 2015 +0000
Merge branch 'upstream 1.8.0'
CMakeLists.txt | 272 +-
INSTALL | 4 +-
Makefile.am | 19 +-
Makefile.in | 44 +-
NEWS | 19 +
aclocal.m4 | 7956 +-------------------
adios_config => adios_config.in | 19 +-
cmake_init | 560 +-
config.h.cmake | 19 +-
config.h.in | 21 +-
config/ac_alacrity.m4 | 2 +-
config/ac_bzip2.m4 | 69 +-
config/ac_dimes.m4 | 11 +-
config/ac_fastbit.m4 | 73 +
config/ac_ncsu_timer.m4 | 5 +-
config/ac_nssi.m4 | 4 +-
config/ac_portals.m4 | 14 +-
config/ac_ridcompress.m4 | 73 +
config/ac_zlib.m4 | 71 +-
aclocal.m4 => config/libtool.m4 | 1679 +----
config/ltoptions.m4 | 368 +
config/ltsugar.m4 | 123 +
config/ltversion.m4 | 23 +
config/lt~obsolete.m4 | 92 +
configure | 1815 +++--
configure.ac | 154 +-
examples/C/CMakeLists.txt | 4 +
examples/C/Makefile.am | 2 +-
examples/C/Makefile.in | 19 +-
examples/C/arrays/Makefile.am | 4 +-
examples/C/arrays/Makefile.in | 19 +-
examples/C/attributes/Makefile.am | 4 +-
examples/C/attributes/Makefile.in | 19 +-
examples/C/compression_test/Makefile.am | 37 -
examples/C/compression_test/adios_global.c | 87 -
examples/C/compression_test/adios_read_box.c | 79 -
examples/C/compression_test/adios_read_points.c | 59 -
.../compression_test/conf_genarray3D/amr_bzip2.xml | 42 -
.../conf_genarray3D/amr_identity.xml | 42 -
.../conf_genarray3D/amr_isobar.xml | 42 -
.../compression_test/conf_genarray3D/amr_none.xml | 42 -
.../compression_test/conf_genarray3D/amr_zlib.xml | 42 -
.../compression_test/conf_genarray3D/mpi_bzip2.xml | 42 -
.../conf_genarray3D/mpi_identity.xml | 42 -
.../conf_genarray3D/mpi_isobar.xml | 42 -
.../compression_test/conf_genarray3D/mpi_none.xml | 42 -
.../compression_test/conf_genarray3D/mpi_zlib.xml | 42 -
.../conf_genarray3D/posix_bzip2.xml | 42 -
.../conf_genarray3D/posix_identity.xml | 42 -
.../conf_genarray3D/posix_isobar.xml | 42 -
.../conf_genarray3D/posix_none.xml | 42 -
.../conf_genarray3D/posix_zlib.xml | 42 -
.../C/compression_test/conf_simple/amr_bzip2.xml | 18 -
.../compression_test/conf_simple/amr_identity.xml | 18 -
.../C/compression_test/conf_simple/amr_isobar.xml | 18 -
.../C/compression_test/conf_simple/amr_none.xml | 18 -
.../C/compression_test/conf_simple/amr_zlib.xml | 18 -
.../conf_simple/bak/adios_global.xml | 18 -
.../C/compression_test/conf_simple/bak/mpi.xml | 18 -
.../C/compression_test/conf_simple/bak/posix.xml | 18 -
.../conf_simple/bak_2/amr_bzip2.xml | 18 -
.../conf_simple/bak_2/amr_identity.xml | 18 -
.../conf_simple/bak_2/amr_isobar.xml | 18 -
.../conf_simple/bak_2/amr_none.xml | 18 -
.../conf_simple/bak_2/amr_szip.xml | 18 -
.../conf_simple/bak_2/amr_zlib.xml | 18 -
.../conf_simple/bak_2/mpi_bzip2.xml | 18 -
.../conf_simple/bak_2/mpi_identity.xml | 18 -
.../conf_simple/bak_2/mpi_isobar.xml | 18 -
.../conf_simple/bak_2/mpi_none.xml | 18 -
.../conf_simple/bak_2/mpi_szip.xml | 18 -
.../conf_simple/bak_2/mpi_zlib.xml | 18 -
.../conf_simple/bak_2/posix_bzip2.xml | 18 -
.../conf_simple/bak_2/posix_identity.xml | 18 -
.../conf_simple/bak_2/posix_isobar.xml | 18 -
.../conf_simple/bak_2/posix_none.xml | 18 -
.../conf_simple/bak_2/posix_szip.xml | 18 -
.../conf_simple/bak_2/posix_zlib.xml | 18 -
.../C/compression_test/conf_simple/mpi_bzip2.xml | 18 -
.../compression_test/conf_simple/mpi_identity.xml | 18 -
.../C/compression_test/conf_simple/mpi_isobar.xml | 18 -
.../C/compression_test/conf_simple/mpi_none.xml | 18 -
.../C/compression_test/conf_simple/mpi_zlib.xml | 18 -
.../C/compression_test/conf_simple/posix_bzip2.xml | 18 -
.../conf_simple/posix_identity.xml | 18 -
.../compression_test/conf_simple/posix_isobar.xml | 18 -
.../C/compression_test/conf_simple/posix_none.xml | 18 -
.../C/compression_test/conf_simple/posix_zlib.xml | 18 -
examples/C/compression_test/genarray3D.c | 205 -
examples/C/compression_test/gread_temperature.ch | 4 -
examples/C/compression_test/gwrite_temperature.ch | 9 -
examples/C/compression_test/read_test.h | 155 -
examples/C/compression_test/test_read_box.sh | 13 -
examples/C/compression_test/test_read_points.sh | 13 -
examples/C/compression_test/write_all.sh | 15 -
examples/C/flexpath_arrays/CMakeLists.txt | 2 +
examples/C/flexpath_arrays/Makefile.in | 17 +-
.../global_range_select/CMakeLists.txt | 21 +
.../global_range_select/Makefile.am | 4 +-
.../global_range_select/Makefile.in | 19 +-
.../flexpath_arrays/process_select/CMakeLists.txt | 21 +
.../C/flexpath_arrays/process_select/Makefile.am | 6 +-
.../C/flexpath_arrays/process_select/Makefile.in | 21 +-
examples/C/global-array-time/Makefile.am | 4 +-
examples/C/global-array-time/Makefile.in | 19 +-
examples/C/global-array/Makefile.am | 4 +-
examples/C/global-array/Makefile.in | 19 +-
.../global-array/adios_global_aggregate_by_color.c | 10 +-
examples/C/icee_arrays/CMakeLists.txt | 1 +
examples/C/icee_arrays/Makefile.am | 1 +
.../C/{flexpath_arrays => icee_arrays}/Makefile.in | 25 +-
examples/C/icee_arrays/array/CMakeLists.txt | 25 +
examples/C/icee_arrays/array/Makefile.am | 20 +
.../C/{arrays => icee_arrays/array}/Makefile.in | 77 +-
examples/C/icee_arrays/array/README.txt | 99 +
examples/C/icee_arrays/array/adios_read.c | 210 +
examples/C/icee_arrays/array/adios_write.c | 194 +
examples/C/manual/Makefile.am | 4 +-
examples/C/manual/Makefile.in | 19 +-
examples/C/query/CMakeLists.txt | 20 +
examples/C/query/Makefile.am | 34 +
.../maya_append => examples/C/query}/Makefile.in | 120 +-
examples/C/query/README_table.txt | 83 +
examples/C/query/README_vars.txt | 79 +
examples/C/query/query_table.c | 193 +
examples/C/query/query_vars.c | 126 +
examples/C/query/write_table.c | 123 +
examples/C/query/write_vars.c | 98 +
examples/C/read_all/Makefile.am | 8 +-
examples/C/read_all/Makefile.in | 23 +-
examples/C/scalars/Makefile.am | 4 +-
examples/C/scalars/Makefile.in | 19 +-
examples/C/schema/Makefile.am | 4 +-
examples/C/schema/Makefile.in | 19 +-
examples/C/schema/rectilinear2d.c | 3 +
examples/C/schema/structured2d.c | 3 +
examples/C/schema/tri2d.c | 3 +
examples/C/schema/tri2d.readme | 2 +-
examples/C/schema/tri2d_noxml.c | 2 +-
examples/C/schema/uniform2d.c | 3 +
examples/C/stat/Makefile.am | 4 +-
examples/C/stat/Makefile.in | 19 +-
examples/C/transforms/CMakeLists.txt | 29 +
examples/C/transforms/Makefile.am | 19 +-
examples/C/transforms/Makefile.in | 63 +-
examples/C/transforms/S3D/alacrity.xml | 28 -
examples/C/transforms/S3D/identity.xml | 27 -
examples/C/transforms/S3D/none.xml | 27 -
examples/C/transforms/adios_read_all_3D.c | 260 -
examples/C/transforms/adios_write_all_3D.c | 198 -
examples/Fortran/CMakeLists.txt | 2 +-
examples/Fortran/Makefile.am | 2 +-
examples/Fortran/Makefile.in | 19 +-
examples/Fortran/arrays/Makefile.am | 4 +-
examples/Fortran/arrays/Makefile.in | 19 +-
examples/Fortran/arrays/arrays_read.F90 | 8 +-
examples/Fortran/global-array-time/Makefile.am | 4 +-
examples/Fortran/global-array-time/Makefile.in | 19 +-
examples/Fortran/global-array/Makefile.am | 4 +-
examples/Fortran/global-array/Makefile.in | 19 +-
examples/Fortran/scalars/Makefile.am | 4 +-
examples/Fortran/scalars/Makefile.in | 19 +-
examples/Fortran/scalars/scalars_read.F90 | 18 +-
examples/Fortran/schema/CMakeLists.txt | 13 +
examples/Fortran/schema/Makefile.am | 43 +
.../Fortran/{global-array => schema}/Makefile.in | 172 +-
examples/Fortran/schema/rectilinear2d_noxml.F90 | 197 +
examples/Fortran/schema/structured2d_noxml.F90 | 198 +
examples/Fortran/schema/tri2d_noxml.F90 | 340 +
examples/Fortran/schema/tri2d_noxml_seperate.F90 | 399 +
examples/Fortran/schema/uniform2d_noxml.F90 | 205 +
examples/Makefile.in | 17 +-
examples/coupling/job1 | 91 -
examples/skel/picongpu/test/Makefile | 46 -
examples/skel/picongpu/test/picongpu.xml | 34 -
examples/skel/picongpu/test/picongpu_params.xml | 34 -
.../skel/picongpu/test/picongpu_params.xml.default | 34 -
examples/skel/picongpu/test/picongpu_skel.xml | 35 -
.../picongpu/test/picongpu_skel_fields_write.c | 184 -
examples/staging/stage_write/make.settings | 2 +-
examples/staging/stage_write/stage_write.c | 15 +-
examples/staging/stage_write_varyingsize/Makefile | 22 +
.../Makefile.genarray_varying | 22 +
.../stage_write_varyingsize/Makefile.stage_write | 29 +
examples/staging/stage_write_varyingsize/README | 54 +
.../staging/stage_write_varyingsize/decompose.h | 17 +
.../stage_write_varyingsize/decompose_block.c | 91 +
.../stage_write_varyingsize/decompose_single.c | 27 +
.../stage_write_varyingsize/genarray_varying.F90 | 324 +
.../stage_write_varyingsize/genarray_varying.xml | 58 +
.../job.32 => stage_write_varyingsize/job} | 44 +-
.../job.32 | 15 +-
.../staging/stage_write_varyingsize/make.settings | 19 +
.../stage_write.c | 74 +-
.../stage_write_varyingsize/test_decompose.c | 134 +
examples/staging/stage_write_varyingsize/utils.c | 211 +
examples/staging/stage_write_varyingsize/utils.h | 50 +
runconf | 582 +-
scripts/FindADIOS.cmake | 14 +-
src/CMakeLists.txt | 195 +-
src/Makefile.am | 137 +-
src/Makefile.in | 2194 ++++--
src/core/adios.c | 29 +-
src/core/adios_copyspec.c | 25 +-
src/core/adios_error.c | 6 +
src/core/adios_icee.h | 270 +
src/core/adios_infocache.c | 131 +
src/core/adios_infocache.h | 35 +
src/core/adios_internals.c | 196 +-
src/core/adios_internals.h | 16 +-
src/core/adios_internals_mxml.c | 63 +-
src/core/adios_read_ext.c | 269 +
src/core/adios_read_hooks.c | 5 +
src/core/adios_read_hooks.h | 8 +-
src/core/adios_read_v1.c | 1 +
src/core/adios_selection_util.c | 198 +-
src/core/adios_selection_util.h | 16 +-
src/core/adios_subvolume.c | 4 +-
src/core/adios_subvolume.h | 21 +-
src/core/adios_timing.c | 474 +-
src/core/adios_timing.h | 18 +-
src/core/adios_transport_hooks.c | 17 +
src/core/adios_transport_hooks.h | 6 +-
src/core/adiosf.c | 331 +
src/core/adiosf_defs_mod.f90 | 1 +
src/core/adiosf_read.c | 2 +-
src/core/adiosf_read_v1.c | 2 +-
src/core/adiosf_write_mod.f90 | 144 +-
src/core/bp_types.h | 2 +-
src/core/bp_utils.c | 201 +-
src/core/bp_utils.h | 28 +-
src/core/buffer.c | 7 +-
src/core/common_adios.c | 57 +-
src/core/common_read.c | 854 ++-
src/core/common_read.h | 18 +-
src/core/flexpath.h | 29 +
src/core/globals.c | 144 +-
src/core/globals.h | 25 +-
src/core/transforms/adios_patchdata.c | 234 +-
src/core/transforms/adios_patchdata.h | 14 +-
src/core/transforms/adios_transforms_common.c | 14 +-
src/core/transforms/adios_transforms_common.h | 2 +-
src/core/transforms/adios_transforms_datablock.c | 29 +-
src/core/transforms/adios_transforms_datablock.h | 6 +
src/core/transforms/adios_transforms_hooks_read.h | 16 +-
src/core/transforms/adios_transforms_hooks_write.c | 19 +-
src/core/transforms/adios_transforms_hooks_write.h | 65 +-
src/core/transforms/adios_transforms_read.c | 822 +-
src/core/transforms/adios_transforms_read.h | 6 +-
src/core/transforms/adios_transforms_reqgroup.c | 41 +-
src/core/transforms/adios_transforms_reqgroup.h | 19 +-
src/core/transforms/adios_transforms_specparse.c | 132 +-
src/core/transforms/adios_transforms_specparse.h | 15 +-
src/core/transforms/adios_transforms_transinfo.h | 15 +-
src/core/transforms/adios_transforms_util.c | 2 +-
src/core/transforms/adios_transforms_write.c | 181 +-
src/core/transforms/adios_transforms_write.h | 11 +-
src/core/util.c | 26 +-
src/public/adios.h | 8 +
src/public/adios_error.h | 6 +
src/public/adios_query.h | 147 +
src/public/adios_read_ext.h | 126 +
src/public/adios_read_v1.h | 6 +
src/public/adios_read_v1_defs.h | 1 +
src/public/adios_read_v2.h | 9 +-
src/query/Makefile.plugins | 9 +
src/query/Makefile.plugins.cmake | 8 +
src/query/adios_query.c | 56 +
src/query/adios_query_hooks.c | 48 +
src/query/adios_query_hooks.h | 36 +
src/query/adios_query_mod.f90 | 198 +
src/query/adiosf_query.c | 111 +
src/query/common_query.c | 825 ++
src/query/common_query.h | 50 +
src/query/fastbit_adios.c | 489 ++
src/query/fastbit_adios.h | 84 +
src/query/query_alac.c | 1415 ++++
src/query/query_fastbit.c | 1582 ++++
src/query/query_utils.c | 37 +
src/query/query_utils.h | 27 +
src/read/read_bp.c | 531 +-
src/read/read_bp_staged.c | 14 +-
src/read/read_bp_staged1.c | 59 +-
src/read/read_dataspaces.c | 45 +-
src/read/read_datatap.c | 5 +
src/read/read_dimes.c | 46 +-
src/read/read_flexpath.c | 392 +-
src/read/read_icee.c | 1476 ++++
src/read/read_nssi.c | 6 +
src/transforms/adios_transform_alacrity_common.h | 92 +
src/transforms/adios_transform_alacrity_read.c | 169 +-
src/transforms/adios_transform_alacrity_write.c | 332 +-
src/transforms/adios_transform_aplod_read.c | 38 +-
src/transforms/adios_transform_aplod_write.c | 22 +-
src/transforms/adios_transform_bzip2_read.c | 13 +-
src/transforms/adios_transform_bzip2_write.c | 22 +-
src/transforms/adios_transform_identity_read.c | 137 +-
src/transforms/adios_transform_identity_read.h | 31 +
src/transforms/adios_transform_identity_write.c | 14 +-
src/transforms/adios_transform_isobar_read.c | 13 +-
src/transforms/adios_transform_isobar_write.c | 22 +-
src/transforms/adios_transform_szip_read.c | 9 +-
src/transforms/adios_transform_szip_write.c | 19 +-
...rity_read.c => adios_transform_template_read.c} | 42 +-
src/transforms/adios_transform_template_write.c | 72 +
src/transforms/adios_transform_zlib_read.c | 19 +-
src/transforms/adios_transform_zlib_write.c | 20 +-
src/write/adios_dataspaces.c | 407 +-
src/write/adios_dimes.c | 539 +-
src/write/adios_flexpath.c | 169 +-
src/write/adios_icee.c | 1194 +++
src/write/adios_mpi_amr.c | 771 +-
src/write/adios_mpi_bgq.c | 15 +-
src/write/adios_mpi_lustre.c | 40 +-
src/write/adios_posix.c | 60 +-
tests/C/CMakeLists.txt | 2 +
tests/C/Makefile.am | 8 +-
tests/C/Makefile.in | 23 +-
tests/C/fgr_tests/CMakeLists.txt | 10 +
tests/C/fgr_tests/Makefile.am | 16 +
{utils/bp2ascii => tests/C/fgr_tests}/Makefile.in | 75 +-
tests/C/fgr_tests/posix_fgr.c | 129 +
tests/C/flexpath_tests/1D_arr_global/Makefile.am | 4 +-
tests/C/flexpath_tests/1D_arr_global/Makefile.in | 19 +-
.../flexpath_tests/1D_arr_global_noxml/Makefile.am | 4 +-
.../flexpath_tests/1D_arr_global_noxml/Makefile.in | 19 +-
tests/C/flexpath_tests/Makefile.in | 17 +-
.../flexpath_tests/global_range_select/Makefile.am | 4 +-
.../flexpath_tests/global_range_select/Makefile.in | 19 +-
tests/C/flexpath_tests/maya_append/Makefile.am | 4 +-
tests/C/flexpath_tests/maya_append/Makefile.in | 19 +-
tests/C/flexpath_tests/maya_noxml/Makefile.am | 4 +-
tests/C/flexpath_tests/maya_noxml/Makefile.in | 19 +-
tests/C/flexpath_tests/scalar/Makefile.am | 4 +-
tests/C/flexpath_tests/scalar/Makefile.in | 19 +-
tests/C/query/CMakeLists.txt | 12 +
tests/C/query/Makefile.am | 19 +
tests/{suite => C/query}/Makefile.in | 46 +-
tests/C/query/alacrity/CMakeLists.txt | 29 +
tests/C/query/alacrity/Makefile.am | 51 +
.../maya_append => query/alacrity}/Makefile.in | 178 +-
tests/C/query/alacrity/adios_alac_query.c | 167 +
tests/C/query/alacrity/adios_build_alac_index.c | 729 ++
tests/C/query/alacrity/adios_read_block.c | 64 +
tests/C/query/alacrity/adios_read_ext_test.c | 165 +
tests/C/query/alacrity/adios_show_bp_file.c | 117 +
tests/C/query/common/CMakeLists.txt | 15 +
tests/C/query/common/Makefile.am | 25 +
.../C/query/common}/Makefile.in | 170 +-
tests/C/query/common/adios_query_test.c | 193 +
tests/C/query/common/adios_query_xml_parse.c | 463 ++
tests/C/query/common/adios_query_xml_parse.h | 26 +
.../query/common/compute_expected_query_results.c | 615 ++
tests/C/query/fastbit/CMakeLists.txt | 14 +
tests/C/query/fastbit/Makefile.am | 24 +
.../maya_append => query/fastbit}/Makefile.in | 95 +-
tests/C/query/fastbit/fastbit_tests.c | 1019 +++
tests/C/query/query-xmls/DS-1D/query0.xml | 12 +
tests/C/query/query-xmls/DS-1D/query1.xml | 14 +
tests/C/query/query-xmls/DS-2D/query0.xml | 12 +
tests/C/query/query-xmls/DS-2D/query1.xml | 14 +
tests/C/query/query-xmls/DS-3D/query-wb0.xml | 16 +
tests/C/query/query-xmls/DS-3D/query-wb1.xml | 16 +
tests/C/query/query-xmls/DS-3D/query0.xml | 12 +
tests/C/query/query-xmls/DS-3D/query1.xml | 25 +
.../query-xmls/DS-particle/DS-particle-query0.xml | 25 +
.../query-xmls/DS-particle/DS-particle-query1.xml | 27 +
tests/C/query/query-xmls/DS-unevenpg/query0.xml | 12 +
tests/C/query/query-xmls/DS-unevenpg/query1.xml | 14 +
tests/Fortran/Makefile.am | 6 +-
tests/Fortran/Makefile.in | 21 +-
tests/Makefile.in | 17 +-
tests/bp_read/Makefile.am | 16 +-
tests/bp_read/Makefile.in | 31 +-
tests/bp_read/genbp.c | 2 +-
tests/bp_read/testbp_c.xml | 2 +-
tests/genarray/Makefile.am | 12 +-
tests/genarray/Makefile.in | 27 +-
tests/genarray/copyarray.F90 | 20 +-
tests/genarray/copyarray2D.F90 | 20 +-
tests/suite/CMakeLists.txt | 4 -
tests/suite/Makefile.in | 17 +-
tests/suite/programs/CMakeLists.txt | 48 +-
tests/suite/programs/Makefile.am | 59 +-
tests/suite/programs/Makefile.in | 126 +-
tests/suite/programs/adios_amr_write.c | 1 -
tests/suite/programs/adios_amr_write_2vars.c | 1 -
tests/suite/programs/adios_staged_read.c | 1 -
tests/suite/programs/adios_staged_read_2vars.c | 1 -
tests/suite/programs/adios_staged_read_v2.c | 1 -
tests/suite/programs/adios_transforms_read_write.c | 3 +-
tests/suite/programs/big_file.c | 1 -
tests/suite/programs/blocks.c | 521 ++
tests/suite/programs/build_standard_dataset.c | 767 ++
tests/suite/programs/connect_to_space_subset.c | 1 -
tests/suite/programs/copy_subvolume.c | 2 +-
tests/suite/programs/group_free_test.c | 3 +-
tests/suite/programs/local_array_time.c | 2 -
tests/suite/programs/many_vars.c | 1 -
tests/suite/programs/path_test.c | 1 -
tests/suite/programs/reuse_dim.c | 1 -
tests/suite/programs/selections.c | 6 +-
tests/suite/programs/set_path.c | 1 -
tests/suite/programs/set_path.xml | 28 +
tests/suite/programs/set_path_var.c | 1 -
tests/suite/programs/set_path_var.xml | 25 +
tests/suite/programs/steps_read_file.c | 1 -
tests/suite/programs/steps_read_stream.c | 1 -
tests/suite/programs/steps_write.c | 1 -
tests/suite/programs/transforms_writeblock_read.c | 129 +
tests/suite/programs/two_groups.c | 1 -
tests/suite/programs/two_groups.xml | 23 +
tests/suite/programs/write_alternate.c | 1 -
tests/suite/programs/write_read.c | 3 +-
tests/suite/tests/17_blockinfo.sh | 37 +
tests/suite/tests/18_aggregation_by_color.sh | 33 +
tests/suite/tests/19_query.sh | 297 +
tests/suite/tests/20_transforms_writeblock.sh | 149 +
toolchain.cmake | 13 -
toolchain/cray/LICENSE | 201 +
toolchain/cray/Platform/ComputeNodeLinux.cmake | 67 +
toolchain/cray/README.md | 18 +
.../cray/ToolChain/CrayPrgEnv-ToolChain.cmake | 52 +
utils/CMakeLists.txt | 4 +
utils/Makefile.am | 8 +-
utils/Makefile.in | 28 +-
utils/adios_lint/Makefile.am | 6 +-
utils/adios_lint/Makefile.in | 21 +-
utils/bp2ascii/Makefile.am | 6 +-
utils/bp2ascii/Makefile.in | 21 +-
utils/bp2bp/Makefile.am | 6 +-
utils/bp2bp/Makefile.in | 21 +-
utils/bp2h5/Makefile.am | 8 +-
utils/bp2h5/Makefile.in | 23 +-
utils/bp2ncd/Makefile.am | 8 +-
utils/bp2ncd/Makefile.in | 23 +-
utils/bpdiff/Makefile.am | 6 +-
utils/bpdiff/Makefile.in | 21 +-
utils/bpdump/Makefile.am | 6 +-
utils/bpdump/Makefile.in | 21 +-
utils/bpdump/bpdump.c | 8 +-
utils/bpls/Makefile.am | 6 +-
utils/bpls/Makefile.in | 21 +-
utils/bpls/bpls.c | 8 +-
utils/bpmeta/CMakeLists.txt | 12 +
utils/bpmeta/Makefile.am | 17 +
utils/{bpdump => bpmeta}/Makefile.in | 63 +-
utils/bpmeta/bpmeta.c | 757 ++
utils/bpsplit/Makefile.am | 10 +-
utils/bpsplit/Makefile.in | 25 +-
utils/fastbit/CMakeLists.txt | 12 +
utils/fastbit/Makefile.am | 19 +
utils/{bp2bp => fastbit}/Makefile.in | 75 +-
utils/fastbit/README | 14 +
utils/fastbit/adios_index_fastbit.c | 566 ++
utils/gpp/Makefile.in | 17 +-
utils/gpp/gpp.py | 9 +-
utils/list_methods/Makefile.am | 12 +-
utils/list_methods/Makefile.in | 27 +-
utils/list_methods/list_methods.c | 11 +
utils/skel/Makefile.in | 17 +-
utils/skel/bin/skel | 29 +-
utils/skel/etc/Makefile.in | 17 +-
utils/skel/etc/templates/source_write_fortran.tmpl | 6 +-
utils/skel/lib/skel_bpy.py | 2 +-
utils/skel/lib/skel_have_adios_timing.py | 2 +-
utils/skel/lib/skel_template.py | 4 +-
utils/skel/src/Makefile.am | 1 -
utils/skel/src/Makefile.in | 19 +-
utils/skeldump/Makefile.am | 6 +-
utils/skeldump/Makefile.in | 21 +-
utils/skeldump/skeldump.c | 43 +-
wrappers/matlab/Makefile | 12 +-
wrappers/matlab/adiosopenc_staging.c | 427 --
wrappers/matlab/writer.bp | Bin 23064 -> 0 bytes
wrappers/numpy/Makefile | 2 +-
wrappers/numpy/adios.cpp | 6398 ++++++++++------
wrappers/numpy/adios.pyx | 143 +-
wrappers/numpy/adios_mpi.cpp | 6425 ++++++++++------
wrappers/numpy/adios_mpi.pyx | 128 +-
wrappers/numpy/adios_mpi2serial.sed | 15 +
wrappers/numpy/conf/CMakeLists.txt | 205 -
wrappers/numpy/conf/MANIFEST.in | 15 -
wrappers/numpy/conf/__init__.py | 0
wrappers/numpy/conf/cythonize.bat | 4 -
wrappers/numpy/conf/cythonize.py | 72 -
wrappers/numpy/conf/cythonize.sh | 4 -
wrappers/numpy/conf/epydoc.cfg | 149 -
wrappers/numpy/conf/epydocify.py | 110 -
wrappers/numpy/conf/mpiconfig.py | 363 -
wrappers/numpy/conf/mpidistutils.py | 1534 ----
wrappers/numpy/conf/mpiregexes.py | 75 -
wrappers/numpy/conf/mpiscanner.py | 342 -
wrappers/numpy/example/staging/README | 35 +
wrappers/numpy/example/staging/adios_read.py | 43 +
wrappers/numpy/example/staging/adios_write.py | 48 +
wrappers/numpy/example/utils/README | 26 +
wrappers/numpy/example/utils/bpls.py | 38 +
wrappers/numpy/example/{ => utils}/ncdf2bp.py | 61 +-
wrappers/numpy/tests/README | 27 +
wrappers/numpy/tests/config.xml | 2 +-
501 files changed, 42019 insertions(+), 26441 deletions(-)
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/adios.git
More information about the debian-science-commits
mailing list