[shark] 77/79: Merge pull request #12 from Shark-ML/blas

[Ghislain Vaillant]

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ghisvail-guest pushed a commit to branch master
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commit 9645832df9c2bb0950ec1a52a8c9faaa74b7b0fe
Merge: c181701 d2a34bc
Author: Oswin Krause <oswin.krause at di.ku.dk>
Date:   Wed Nov 4 14:44:45 2015 +0100

    Merge pull request #12 from Shark-ML/blas
    
    Adding support for Block expressions in BLAS

 include/shark/Algorithms/QP/QpMcLinear.h           |    3 +-
 .../shark/Algorithms/Trainers/KernelSGDTrainer.h   |    3 +-
 .../Trainers/NormalizeComponentsWhitening.h        |    4 +-
 include/shark/LinAlg/BLAS/assignment.hpp           |  606 ++++++++++++
 include/shark/LinAlg/BLAS/detail/iterator.hpp      |    5 +-
 include/shark/LinAlg/BLAS/detail/traits.hpp        |   33 +-
 include/shark/LinAlg/BLAS/expression_types.hpp     |   94 --
 include/shark/LinAlg/BLAS/kernels/default/gemv.hpp |   12 +
 .../shark/LinAlg/BLAS/kernels/matrix_assign.hpp    |   18 +-
 .../shark/LinAlg/BLAS/kernels/vector_assign.hpp    |    2 +-
 include/shark/LinAlg/BLAS/lu.hpp                   |    4 +-
 include/shark/LinAlg/BLAS/matrix.hpp               |  139 +--
 include/shark/LinAlg/BLAS/matrix_expression.hpp    | 1003 +++++++++++++-------
 include/shark/LinAlg/BLAS/matrix_proxy.hpp         |  890 +++++------------
 include/shark/LinAlg/BLAS/matrix_sparse.hpp        |   67 +-
 include/shark/LinAlg/BLAS/triangular_matrix.hpp    |  118 +--
 include/shark/LinAlg/BLAS/vector.hpp               |  225 +----
 include/shark/LinAlg/BLAS/vector_expression.hpp    |  360 ++++++-
 include/shark/LinAlg/BLAS/vector_proxy.hpp         |  291 +-----
 include/shark/LinAlg/BLAS/vector_sparse.hpp        |   97 +-
 include/shark/LinAlg/Impl/Cholesky.inl             |    6 +-
 include/shark/LinAlg/Impl/pivotingRQ.inl           |    5 +-
 include/shark/LinAlg/Impl/solveSystem.inl          |   51 +-
 include/shark/LinAlg/Metrics.h                     |    4 +-
 include/shark/LinAlg/rotations.h                   |   13 +-
 include/shark/LinAlg/solveSystem.h                 |    4 +-
 include/shark/Models/Autoencoder.h                 |   10 +-
 include/shark/Models/ConvexCombination.h           |    7 +-
 include/shark/Models/FFNet.h                       |   10 +-
 include/shark/Models/Impl/LinearModel.inl          |  264 ------
 include/shark/Models/Kernels/CSvmDerivative.h      |    7 +-
 include/shark/Models/Kernels/GaussianRbfKernel.h   |    2 +-
 include/shark/Models/Kernels/KernelExpansion.h     |    2 +-
 include/shark/Models/Kernels/LinearKernel.h        |    4 +-
 include/shark/Models/Kernels/MonomialKernel.h      |    8 +-
 include/shark/Models/Kernels/PolynomialKernel.h    |    9 +-
 include/shark/Models/LinearModel.h                 |    6 +-
 include/shark/Models/TiedAutoencoder.h             |   12 +-
 .../Benchmarks/RotatedErrorFunction.h              |    3 +-
 .../Impl/SparseAutoencoderError.inl                |    2 +-
 .../NegativeGaussianProcessEvidence.h              |    3 +-
 .../Distributions/MultiVariateNormalDistribution.h |    3 +-
 .../Unsupervised/RBM/Impl/AverageEnergyGradient.h  |    4 +-
 include/shark/Unsupervised/RBM/Impl/analytics.h    |    4 +-
 .../Unsupervised/RBM/Neuronlayers/BinaryLayer.h    |   13 +-
 .../Unsupervised/RBM/Neuronlayers/BipolarLayer.h   |   11 +-
 .../Unsupervised/RBM/Neuronlayers/GaussianLayer.h  |    7 +-
 .../RBM/Neuronlayers/TruncatedExponentialLayer.h   |    4 +-
 include/shark/Unsupervised/RBM/RBM.h               |    4 +-
 src/Algorithms/FisherLDA.cpp                       |    4 +-
 src/Algorithms/GradientDescent/BFGS.cpp            |    6 +-
 src/Algorithms/LinearRegression.cpp                |    2 +-
 src/Algorithms/PCA.cpp                             |   11 +-
 src/Models/OnlineRNNet.cpp                         |   20 +-
 src/Models/RBFLayer.cpp                            |    3 +-
 src/Models/RNNet.cpp                               |   11 +-
 56 files changed, 2090 insertions(+), 2423 deletions(-)

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