[ufl] 04/06: Merge tag 'upstream/2016.2.0'

Johannes Ring johannr-guest at moszumanska.debian.org
Thu Dec 1 13:52:50 UTC 2016


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johannr-guest pushed a commit to branch master
in repository ufl.

commit fbc631ee96816dfb8056f8f59a6a82f101e49e8e
Merge: 42fc6f4 02f7ca9
Author: Johannes Ring <johannr at simula.no>
Date:   Thu Dec 1 14:19:16 2016 +0100

    Merge tag 'upstream/2016.2.0'
    
    Upstream version 2016.2.0

 .gitignore                                         |    5 -
 AUTHORS                                            |   30 +
 ChangeLog                                          |   35 +
 README                                             |  151 ---
 README.rst                                         |   66 ++
 demo/Poisson.ufl                                   |   10 +-
 doc/man/man1/form2ufl.1.gz                         |  Bin 616 -> 0 bytes
 doc/man/man1/ufl-analyse.1.gz                      |  Bin 791 -> 809 bytes
 doc/man/man1/ufl-convert.1.gz                      |  Bin 939 -> 957 bytes
 doc/man/man1/ufl-version.1.gz                      |  Bin 594 -> 596 bytes
 doc/man/man1/ufl2py.1.gz                           |  Bin 626 -> 654 bytes
 doc/sphinx/README                                  |   17 +-
 doc/sphinx/generate-apidoc                         |   29 -
 doc/sphinx/source/api-doc/modules.rst              |    7 -
 doc/sphinx/source/api-doc/ufl.algorithms.rst       |  270 ------
 doc/sphinx/source/api-doc/ufl.core.rst             |   70 --
 doc/sphinx/source/api-doc/ufl.corealg.rst          |   38 -
 doc/sphinx/source/api-doc/ufl.finiteelement.rst    |  118 ---
 doc/sphinx/source/api-doc/ufl.formatting.rst       |   54 --
 doc/sphinx/source/api-doc/ufl.rst                  |  354 -------
 doc/sphinx/source/api-doc/ufl.utils.rst            |  102 --
 doc/sphinx/source/conf.py                          |   21 +-
 doc/sphinx/source/index.rst                        |  118 +--
 doc/sphinx/source/installation.rst                 |   47 +
 doc/sphinx/source/manual.rst                       |   16 +
 doc/sphinx/source/{user => manual}/algorithms.rst  |  196 ++--
 .../source/{user => manual}/command_line_utils.rst |   23 +-
 doc/sphinx/source/{user => manual}/examples.rst    |   93 +-
 .../source/{user => manual}/form_language.rst      |  256 +++--
 .../{user => manual}/internal_representation.rst   |   14 +-
 .../source/{user => manual}/introduction.rst       |    7 +-
 doc/sphinx/source/{user => manual}/user_manual.rst |    0
 doc/sphinx/source/releases.rst                     |    5 +
 doc/sphinx/source/releases/next.rst                |   35 +-
 doc/sphinx/source/releases/v1.6.0.rst              |    7 +-
 doc/sphinx/source/releases/v2016.1.0.rst           |   27 +
 release.conf                                       |    6 -
 scripts/ufl-analyse                                |    7 +-
 scripts/ufl-convert                                |  102 +-
 scripts/ufl-version                                |   10 +-
 scripts/ufl2py                                     |    3 +-
 setup.cfg                                          |    3 +
 setup.py                                           |  103 +-
 test/conftest.py                                   |    4 +
 test/sourceme.sh                                   |    5 -
 test/test_algorithms.py                            |    1 -
 test/test_analyse_demos.py                         |   73 +-
 test/test_apply_algebra_lowering.py                |   47 +-
 test/test_apply_function_pullbacks.py              |  112 +--
 test/test_apply_restrictions.py                    |    7 +-
 test/test_arithmetic.py                            |   17 +-
 test/test_automatic_differentiation.py             |  157 +--
 test/test_book_snippets.py                         |  154 ++-
 test/test_change_to_reference_frame.py             |   20 +-
 test/test_check_arities.py                         |    1 +
 test/test_classcoverage.py                         |   53 +-
 test/test_degree_estimation.py                     |    4 +-
 test/test_derivative.py                            |  193 ++--
 test/test_diff.py                                  |    4 +-
 test/test_domains.py                               |    8 +-
 test/test_elements.py                              |    4 +
 test/test_expand_indices.py                        |   34 +-
 test/test_form.py                                  |   19 +-
 test/test_future_division.py                       |    5 +-
 test/test_grad.py                                  |   23 +-
 test/test_indexing.py                              |   12 +-
 test/test_indices.py                               |   27 +-
 test/test_literals.py                              |   28 +-
 test/test_measures.py                              |   16 +-
 test/test_mock_expr.py                             |   76 --
 test/test_new_ad.py                                |   26 +-
 test/test_piecewise_checks.py                      |    2 +-
 test/test_reference_shapes.py                      |    5 +-
 test/test_scratch.py                               |   73 +-
 test/test_signature.py                             |   91 +-
 test/test_simplify.py                              |   28 +-
 test/test_split.py                                 |   44 +-
 test/test_str.py                                   |   38 +-
 test/test_tensoralgebra.py                         |   33 +-
 test/test_utilities.py                             |   25 +-
 ufl/__init__.py                                    |  205 ++--
 ufl/algebra.py                                     |   97 +-
 ufl/algorithms/__init__.py                         |  103 +-
 ufl/algorithms/ad.py                               |    6 +-
 ufl/algorithms/analysis.py                         |   41 +-
 ufl/algorithms/apply_algebra_lowering.py           |   43 +-
 ufl/algorithms/apply_derivatives.py                |  416 ++++----
 ufl/algorithms/apply_function_pullbacks.py         |   92 +-
 ufl/algorithms/apply_geometry_lowering.py          |  105 +-
 ufl/algorithms/apply_integral_scaling.py           |   26 +-
 ufl/algorithms/apply_restrictions.py               |  178 ++--
 ufl/algorithms/argument_dependencies.py            |  175 ----
 ufl/algorithms/change_to_reference.py              |  146 +--
 ufl/algorithms/check_arities.py                    |   27 +-
 ufl/algorithms/check_restrictions.py               |   40 +-
 ufl/algorithms/checks.py                           |   38 +-
 ufl/algorithms/compute_form_data.py                |  183 ++--
 ufl/algorithms/domain_analysis.py                  |   87 +-
 ufl/algorithms/elementtransformations.py           |   16 +-
 ufl/algorithms/estimate_degrees.py                 |  118 +--
 ufl/algorithms/expand_compounds.py                 |    3 +-
 ufl/algorithms/expand_indices.py                   |   78 +-
 ufl/algorithms/formdata.py                         |   67 +-
 ufl/algorithms/formfiles.py                        |  161 ++--
 ufl/algorithms/formsplitter.py                     |    4 +-
 ufl/algorithms/formtransformations.py              |   76 +-
 ufl/algorithms/forward_ad.py                       | 1018 --------------------
 ufl/algorithms/map_integrands.py                   |   18 +-
 ufl/algorithms/multifunction.py                    |    6 +-
 ufl/algorithms/pdiffs.py                           |  247 -----
 ufl/algorithms/predicates.py                       |   50 -
 ufl/algorithms/renumbering.py                      |   13 +-
 ufl/algorithms/replace.py                          |   13 +-
 ufl/algorithms/signature.py                        |   67 +-
 ufl/algorithms/transformer.py                      |   48 +-
 ufl/algorithms/traversal.py                        |    8 +-
 ufl/argument.py                                    |   63 +-
 ufl/assertions.py                                  |   28 +-
 ufl/cell.py                                        |  259 +++--
 ufl/checks.py                                      |   21 +-
 ufl/classes.py                                     |   56 +-
 ufl/coefficient.py                                 |   39 +-
 ufl/compound_expressions.py                        |  111 ++-
 ufl/conditional.py                                 |  118 ++-
 ufl/constantvalue.py                               |  146 +--
 ufl/core/compute_expr_hash.py                      |   13 +-
 ufl/core/expr.py                                   |  311 +++---
 ufl/core/multiindex.py                             |   49 +-
 ufl/core/operator.py                               |   28 +-
 ufl/core/terminal.py                               |   17 +-
 ufl/core/ufl_id.py                                 |   35 +-
 ufl/core/ufl_type.py                               |  129 ++-
 ufl/corealg/map_dag.py                             |   22 +-
 ufl/corealg/multifunction.py                       |   57 +-
 ufl/corealg/traversal.py                           |   30 +-
 ufl/differentiation.py                             |  208 ++--
 ufl/domain.py                                      |  140 +--
 ufl/equation.py                                    |   23 +-
 ufl/exprcontainers.py                              |   31 +-
 ufl/exprequals.py                                  |   40 +-
 ufl/exproperators.py                               |  157 +--
 ufl/finiteelement/__init__.py                      |    7 +-
 ufl/finiteelement/brokenelement.py                 |   13 +-
 ufl/finiteelement/elementlist.py                   |  347 ++++---
 ufl/finiteelement/enrichedelement.py               |   46 +-
 ufl/finiteelement/facetelement.py                  |   13 +-
 ufl/finiteelement/finiteelement.py                 |  147 ++-
 ufl/finiteelement/finiteelementbase.py             |  126 ++-
 ufl/finiteelement/hdivcurl.py                      |   53 +-
 ufl/finiteelement/interiorelement.py               |   13 +-
 ufl/finiteelement/mixedelement.py                  |  178 ++--
 ufl/finiteelement/outerproductelement.py           |   83 --
 ufl/finiteelement/restrictedelement.py             |   50 +-
 ufl/finiteelement/tensorproductelement.py          |   80 +-
 ufl/finiteelement/traceelement.py                  |   49 -
 ufl/form.py                                        |  232 +++--
 ufl/formatting/graph.py                            |   62 +-
 ufl/formatting/latextools.py                       |   28 +-
 ufl/formatting/printing.py                         |   41 +-
 ufl/formatting/ufl2dot.py                          |  138 +--
 ufl/formatting/ufl2latex.py                        |  175 ++--
 ufl/formoperators.py                               |  155 +--
 ufl/functionspace.py                               |   69 +-
 ufl/geometry.py                                    |  158 ++-
 ufl/index_combination_utils.py                     |   36 +-
 ufl/indexed.py                                     |   68 +-
 ufl/indexing.py                                    |   22 -
 ufl/indexsum.py                                    |   35 +-
 ufl/integral.py                                    |   89 +-
 ufl/log.py                                         |   74 +-
 ufl/mathfunctions.py                               |   83 +-
 ufl/measure.py                                     |  246 +++--
 ufl/objects.py                                     |   23 +-
 ufl/operators.py                                   |  309 +++---
 ufl/permutation.py                                 |   31 +-
 ufl/precedence.py                                  |   30 +-
 ufl/protocols.py                                   |    6 +-
 ufl/referencevalue.py                              |   10 +-
 ufl/restriction.py                                 |   21 +-
 ufl/sobolevspace.py                                |   18 +-
 ufl/sorting.py                                     |  237 ++---
 ufl/split_functions.py                             |  142 ++-
 ufl/tensoralgebra.py                               |  174 ++--
 ufl/tensors.py                                     |  143 +--
 ufl/utils/counted.py                               |    7 +-
 ufl/utils/derivativetuples.py                      |    9 +-
 ufl/utils/dicts.py                                 |   13 +-
 ufl/utils/formatting.py                            |   13 +-
 ufl/utils/indexflattening.py                       |    5 +-
 ufl/utils/py23.py                                  |   60 ++
 ufl/utils/sequences.py                             |   14 +-
 ufl/utils/sorting.py                               |   12 +-
 ufl/utils/stacks.py                                |    4 +-
 ufl/utils/system.py                                |   51 -
 ufl/utils/timer.py                                 |   45 -
 ufl/utils/ufltypedicts.py                          |    5 +-
 ufl/variable.py                                    |   31 +-
 197 files changed, 6841 insertions(+), 7562 deletions(-)

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