[r-cran-erm] 04/33: Import Debian patch 0.12-0-4

[Andreas Tille]

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tille pushed a commit to branch master
in repository r-cran-erm.

commit 5a065ad0085f2dac3e2ad3bfa5ace9d3376da837
Author: Julian Gilbey <jdg at debian.org>
Date:   Sun May 23 23:49:55 2010 +0100

    Import Debian patch 0.12-0-4
---
 debian/changelog             | 7 +++++++
 debian/patches/04_PathwayMap | 2 +-
 2 files changed, 8 insertions(+), 1 deletion(-)

diff --git a/debian/changelog b/debian/changelog
index d88e5f8..3bd6ab1 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+erm (0.12-0-4) unstable; urgency=low
+
+  * Fixed incorrect variable name in plotPathwayMap (thanks to Reinhold
+    Hatzinger again)
+
+ -- Julian Gilbey <jdg at debian.org>  Sun, 23 May 2010 23:49:55 +0100
+
 erm (0.12-0-3) unstable; urgency=low
 
   * Fix bug with plotPathwayMap - failed if pp was not given as a
diff --git a/debian/patches/04_PathwayMap b/debian/patches/04_PathwayMap
index 5ebbf2a..71c8d47 100644
--- a/debian/patches/04_PathwayMap
+++ b/debian/patches/04_PathwayMap
@@ -152,7 +152,7 @@ Last-Update: 2010-05-16
 +
 +      # betapars are easiness parameters; only the pars need negating
 +      threshtable<-cbind(object$betapar * -1, object$se.beta)
-+      rownames(threshtable) <- colnames(pcm$X)
++      rownames(threshtable) <- colnames(object$X)
 +
 +      # shorter synonym
 +      tt<-threshtable

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