[r-cran-mcmcpack] 76/90: Imported Debian patch 1.3-6-1
Andreas Tille
tille at debian.org
Fri Dec 16 09:07:51 UTC 2016
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository r-cran-mcmcpack.
commit 12159cb53929c1ce31af9464ef6662e72494ca06
Merge: c078715 3856757
Author: Chris Lawrence <lawrencc at debian.org>
Date: Tue Aug 16 20:45:12 2016 -0400
Imported Debian patch 1.3-6-1
DESCRIPTION | 25 +-
HISTORY | 465 -----------
MD5 | 117 ++-
NAMESPACE | 21 +-
R/BayesFactors.R | 11 +-
R/MCMCdynamicIRT1d-b.R | 2 +-
R/MCMCdynamicIRT1d.R | 2 +-
R/MCMCintervention.R | 231 ------
R/MCMCirt1d.R | 2 +-
R/MCMCirtHier1d.R | 2 +-
R/MCMCirtKdRob.R | 2 +-
R/MCMCmetrop1R.R | 15 +-
R/MCMCmixfactanal.R | 2 +-
R/MCMCordfactanal.R | 2 +-
R/MCMCprobit.R | 2 +-
R/testpanelSubjectBreak.R | 2 +-
README | 20 +-
cleanup | 2 +-
debian/changelog | 18 +
debian/control | 6 +-
man/HMMpanelFE.Rd | 18 +-
man/HMMpanelRE.Rd | 6 +-
man/MCMCSVDreg.Rd | 8 +-
man/MCMCbinaryChange.Rd | 24 +-
man/MCMCdynamicEI.Rd | 13 +-
man/MCMCfactanal.Rd | 7 +-
man/MCMChierEI.Rd | 7 +-
man/MCMChlogit.Rd | 7 +-
man/MCMChpoisson.Rd | 7 +-
man/MCMChregress.Rd | 7 +-
man/MCMCintervention.Rd | 209 -----
man/MCMCirt1d.Rd | 7 +-
man/MCMCirtHier1d.Rd | 16 +-
man/MCMCirtKd.Rd | 7 +-
man/MCMCirtKdHet.Rd | 7 +-
man/MCMCirtKdRob.Rd | 11 +-
man/MCMClogit.Rd | 7 +-
man/MCMCmetrop1R.Rd | 7 +-
man/MCMCmixfactanal.Rd | 7 +-
man/MCMCmnl.Rd | 7 +-
man/MCMCoprobit.Rd | 7 +-
man/MCMCoprobitChange.Rd | 15 +-
man/MCMCordfactanal.Rd | 7 +-
man/MCMCpoisson.Rd | 8 +-
man/MCMCpoissonChange.Rd | 4 +-
man/MCMCprobit.Rd | 8 +-
man/MCMCprobitChange.Rd | 2 -
man/MCMCquantreg.Rd | 8 +-
man/MCMCregress.Rd | 10 +-
man/MCMCregressChange.Rd | 23 +-
man/MCMCtobit.Rd | 9 +-
man/PErisk.Rd | 4 +-
man/Rehnquist.Rd | 2 +-
man/SSVSquantreg.Rd | 10 +-
man/Senate.Rd | 2 +-
man/SupremeCourt.Rd | 2 +-
man/plotChangepoint.Rd | 2 -
man/plotIntervention.Rd | 37 -
man/plotState.Rd | 5 +-
man/testpanelGroupBreak.Rd | 6 +-
man/testpanelSubjectBreak.Rd | 11 +-
src/MCMCintervention.cc | 1664 ----------------------------------------
src/MCMCregressChange.cc | 4 +-
src/{Makevars => Makevars.win} | 0
64 files changed, 315 insertions(+), 2873 deletions(-)
diff --cc debian/changelog
index 851fb8d,0000000..4e0824d
mode 100644,000000..100644
--- a/debian/changelog
+++ b/debian/changelog
@@@ -1,361 -1,0 +1,379 @@@
++mcmcpack (1.3-6-1) unstable; urgency=medium
++
++ * New upstream release.
++
++ -- Chris Lawrence <lawrencc at debian.org> Tue, 16 Aug 2016 20:45:12 -0400
++
++mcmcpack (1.3-5-1) unstable; urgency=medium
++
++ * New upstream release.
++
++ -- Chris Lawrence <lawrencc at debian.org> Wed, 23 Mar 2016 21:33:43 -0400
++
++mcmcpack (1.3-4-1) unstable; urgency=medium
++
++ * New upstream release.
++
++ -- Chris Lawrence <lawrencc at debian.org> Tue, 01 Mar 2016 20:18:43 -0500
++
+mcmcpack (1.3-3-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 02 May 2013 17:05:27 -0400
+
+mcmcpack (1.3-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 21 Apr 2013 22:48:07 -0400
+
+mcmcpack (1.2-4.1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 06 Apr 2013 20:00:04 -0400
+
+mcmcpack (1.2-4-1) unstable; urgency=low
+
+ * New upstream release.
+ * Rebuild for R 3.0.
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 03 Apr 2013 04:01:40 -0400
+
+mcmcpack (1.2-3-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 13 May 2012 22:20:11 -0400
+
+mcmcpack (1.2-2-1.1) unstable; urgency=low
+
+ * Non-maintainer upload.
+ * Fix "ftbfs with GCC-4.7": add patch gcc-4.7.patch ("this->" qualifier).
+ (Closes: #667272)
+
+ -- gregor herrmann <gregoa at debian.org> Tue, 08 May 2012 17:06:03 +0200
+
+mcmcpack (1.2-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 22 Mar 2012 13:52:23 -0400
+
+mcmcpack (1.1-5-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 25 Oct 2011 22:38:29 -0400
+
+mcmcpack (1.1-4-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 09 Oct 2011 05:29:12 -0400
+
+mcmcpack (1.1-1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 23 Jul 2011 19:31:07 -0500
+
+mcmcpack (1.0-11-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 06 May 2011 13:16:06 -0500
+
+mcmcpack (1.0-10-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 06 Mar 2011 17:16:24 -0600
+
+mcmcpack (1.0-9-2) unstable; urgency=low
+
+ * Use simplified debian/rules.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 05 Feb 2011 02:31:18 -0600
+
+mcmcpack (1.0-9-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 05 Feb 2011 02:18:45 -0600
+
+mcmcpack (1.0-8-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 15 Jan 2011 11:24:48 -0600
+
+mcmcpack (1.0-7-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 07 Jul 2010 03:47:13 -0500
+
+mcmcpack (1.0-6-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 13 May 2010 02:03:43 -0500
+
+mcmcpack (1.0-5-2) unstable; urgency=low
+
+ * Update dependencies for VR bundle split.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 12 Apr 2010 23:44:47 -0500
+
+mcmcpack (1.0-5-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 30 Mar 2010 20:11:33 -0500
+
+mcmcpack (1.0-4-2) unstable; urgency=low
+
+ * Rebuild for R >= 2.10.0.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 26 Oct 2009 00:20:55 -0500
+
+mcmcpack (1.0-4-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 10 Sep 2009 00:34:49 -0500
+
+mcmcpack (1.0-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 30 Jul 2009 15:01:11 -0500
+
+mcmcpack (1.0-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 25 Jul 2009 01:25:18 -0500
+
+mcmcpack (1.0-1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 01 Jul 2009 18:31:04 -0500
+
+mcmcpack (0.9-6-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 16 Mar 2009 22:18:40 -0500
+
+mcmcpack (0.9-4-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 04 Mar 2008 14:52:43 -0600
+
+mcmcpack (0.9-3-1) unstable; urgency=low
+
+ * New upstream release.
+ * Fix FTBFS on amd64. (Closes: #417427)
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 01 Mar 2008 22:51:00 -0600
+
+mcmcpack (0.9-2-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 07 Oct 2007 20:16:55 -0500
+
+mcmcpack (0.9-1-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 03 Sep 2007 15:39:59 -0500
+
+mcmcpack (0.8-2-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 10 Jul 2007 17:27:59 -0500
+
+mcmcpack (0.8-1-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 20 Jan 2007 21:45:31 -0600
+
+mcmcpack (0.7-4-2) unstable; urgency=low
+
+ * Look for trunc() in -lm, to fix FTBFS on m68k (and possibly other
+ platforms?). (Closes: #389400)
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 8 Oct 2006 18:21:07 -0500
+
+mcmcpack (0.7-4-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 5 Oct 2006 02:12:06 -0500
+
+mcmcpack (0.7-3-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 21 Sep 2006 21:30:32 -0500
+
+mcmcpack (0.7-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 1 Jun 2006 16:10:06 -0400
+
+mcmcpack (0.7-1-1) unstable; urgency=low
+
+ * New upstream release.
+ * Revise description to omit discussion of "upcoming" models that don't
+ seem to be upcoming; add suggestions of bayesm, eco, and mnp to fill
+ in some of the gaps.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 29 Jan 2006 22:01:22 -0500
+
+mcmcpack (0.6-6-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 8 Dec 2005 08:59:17 -0500
+
+mcmcpack (0.6-5-2) unstable; urgency=low
+
+ * Fix FTBFS with gcc 4.0.2-3 and later. (Closes: #336281)
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 29 Oct 2005 23:40:09 -0400
+
+mcmcpack (0.6-5-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 30 Jun 2005 16:03:34 -0500
+
+mcmcpack (0.6-4-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 2 Apr 2005 23:07:43 -0600
+
+mcmcpack (0.6-1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 3 Mar 2005 19:01:23 -0600
+
+mcmcpack (0.5-2-4) unstable; urgency=low
+
+ * Really fix FTBFS on autobuilders.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 11 Oct 2004 10:56:34 -0500
+
+mcmcpack (0.5-2-3) unstable; urgency=low
+
+ * Fix FTBFS on autobuilders.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 9 Oct 2004 21:25:59 -0500
+
+mcmcpack (0.5-2-2) unstable; urgency=low
+
+ * Rebuild for R 2.0.0.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 8 Oct 2004 00:24:03 -0500
+
+mcmcpack (0.5-2-1) unstable; urgency=low
+
+ * New upstream release. Kudos to Andrew, Kevin, and Pierre L'Ecuyer for
+ their quick response to license issues with 0.5-1.
+ * Now require r-cran-coda (>> 0.8).
+ * Include HISTORY file as upstream changelog.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 17 Aug 2004 21:38:55 -0500
+
+mcmcpack (0.4-8-2) unstable; urgency=low
+
+ * Update dependencies for r-recommended package split.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 3 May 2004 14:15:55 -0500
+
+mcmcpack (0.4-8-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 17 Feb 2004 23:35:33 -0600
+
+mcmcpack (0.4-7-1) unstable; urgency=low
+
+ * New upstream release.
+ * Update control file description for new upstream URL.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 5 Feb 2004 16:50:13 -0600
+
+mcmcpack (0.4-6-1) unstable; urgency=low
+
+ * New upstream release
+ + Fixed a bug in rnoncenhypergeom()
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 5 Dec 2003 10:33:51 -0600
+
+mcmcpack (0.4-5-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 17 Nov 2003 13:17:39 -0600
+
+mcmcpack (0.4-3-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 13 Oct 2003 08:19:13 -0500
+
+mcmcpack (0.4-2-1) unstable; urgency=low
+
+ * New upstream release.
+ * Revised packaging to be more compatible with new upstream versions.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 9 Aug 2003 22:44:39 -0500
+
+mcmcpack (0.4-1-1) unstable; urgency=low
+
+ * The "my days of being ABD are close to being over" release.
+ * New upstream release.
+ * New features:
+ + Metric and ordinal factor analysis models.
+ + k-dimensional item response theory model.
+ + A few new density and random draw functions.
+ * Install package to /usr/lib/R/site-library.
+ * Updated to standards-version 3.5.10; no substantive changes.
+ * Add Daniel Pemstein to upstream authors.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 10 Jun 2003 14:11:07 -0500
+
+mcmcpack (0.3-11-3) unstable; urgency=low
+
+ * Remove build hack now that R 1.7.0 has been released incorporating the
+ needed fix.
+ * Depend on r-recommended and r-base-core; remove r-base dependency.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 21 Apr 2003 11:33:45 -0500
+
+mcmcpack (0.3-11-2) unstable; urgency=medium
+
+ * Depend on r-cran-coda. (Closes: #187071)
+ * Note in the description that other samplers are used, in addition to
+ Gibbs sampling.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 5 Apr 2003 22:29:25 -0600
+
+mcmcpack (0.3-11-1) unstable; urgency=low
+
+ * Initial Release. (Closes: #169717)
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 30 Mar 2003 08:10:27 -0600
diff --cc debian/control
index e5d95bf,0000000..d13a478
mode 100644,000000..100644
--- a/debian/control
+++ b/debian/control
@@@ -1,37 -1,0 +1,37 @@@
+Source: mcmcpack
+Section: gnu-r
+Priority: optional
+Maintainer: Chris Lawrence <lawrencc at debian.org>
- Build-Depends: debhelper (>> 9), r-base-dev (>= 3.0), r-cran-coda (>= 0.16), r-cran-mass, cdbs, dpkg-dev (>= 1.16.1~)
- Standards-Version: 3.9.3
++Build-Depends: debhelper (>> 9), r-base-dev (>= 3.0), r-cran-coda (>= 0.16), r-cran-mass, cdbs, dpkg-dev (>= 1.16.1~), r-cran-quantreg, r-bioc-graph
++Standards-Version: 3.9.8
+Homepage: http://mcmcpack.wustl.edu/
+
+Package: r-cran-mcmcpack
+Architecture: any
- Depends: ${shlibs:Depends}, r-cran-coda (>= 0.16), r-cran-mass, ${misc:Depends}, ${R:Depends}
++Depends: ${shlibs:Depends}, r-cran-coda (>= 0.16), r-cran-mass, ${misc:Depends}, ${R:Depends}, r-cran-quantreg, r-bioc-graph
+Suggests: r-cran-bayesm, r-cran-eco, r-cran-mnp
+Description: R routines for Markov chain Monte Carlo model estimation
+ This is a set of routines for GNU R that implement various
+ statistical and econometric models using Markov chain Monte Carlo
+ (MCMC) estimation, which allows "solving" models that would otherwise
+ be intractable with traditional techniques, particularly problems in
+ Bayesian statistics (where one or more "priors" are used as part of
+ the estimation procedure, instead of an assumption of ignorance about
+ the "true" point estimates), although MCMC can also be used to solve
+ frequentist statistical problems with uninformative priors. MCMC
+ techniques are also preferable over direct estimation in the presence
+ of missing data.
+ .
+ Currently implemented are a number of ecological inference (EI)
+ routines (for estimating individual-level attributes or behavior from
+ aggregate data, such as electoral returns or census results), as well
+ as models for traditional linear panel and cross-sectional data, some
+ visualization routines for EI diagnostics, two item-response theory
+ (or ideal-point estimation) models, metric, ordinal, and
+ mixed-response factor analysis, and models for Gaussian (linear) and
+ Poisson regression, logistic regression (or logit), and binary and
+ ordinal-response probit models.
+ .
+ The suggested packages (r-cran-bayesm, -eco, and -mnp) contain
+ additional models that may also be useful for those interested in
+ this package.
--
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