[r-cran-geepack] 07/17: Imported Upstream version 1.2-1.gz
Andreas Tille
tille at debian.org
Fri Dec 16 15:39:23 UTC 2016
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository r-cran-geepack.
commit 3e85bdedf102b87c7791a63065a81114c45a01fe
Author: Andreas Tille <tille at debian.org>
Date: Fri Dec 16 15:44:39 2016 +0100
Imported Upstream version 1.2-1.gz
---
ChangeLog | 441 +++++++++++++++++++++++++++--------------------------
DESCRIPTION | 8 +-
MD5 | 12 +-
R/geeglm-anova.R | 19 ++-
R/geeglm.R | 2 +-
build/vignette.rds | Bin 264 -> 265 bytes
inst/CITATION | 88 +++++------
7 files changed, 291 insertions(+), 279 deletions(-)
diff --git a/ChangeLog b/ChangeLog
index 3e7da90..e22b128 100755
--- a/ChangeLog
+++ b/ChangeLog
@@ -1,217 +1,224 @@
-2014-09-13 Søren Højsgaard <sorenh at math.aau.dk>
-
- * Maintainer of geepack is now Søren Højsgaard
-
- * Location of vignette fixed
-
- * Version 1.2-0 uploaded
-
-2012-01-27 Jun Yan <jun.yan at uconn.edu>
-
- * Commented out #undef NDEBUG in geesubs.cc.
- * Added a VecPrint function in utils.cc to print DVector;
- this replaces usage of cerr.
-
-2012-01-09 Jun Yan <jun.yan at uconn.edu>
-
- * Thank Jeffrey Horner <jeffrey.horner at vanderbilt.edu>
- and Cole Beck <cole.beck at vanderbilt.edu> for fixing the
- undefined symbol error (see 2011-11-14 entry:
- _Z5ValidIiEN3TNT6VectorIT_EERS3_RNS1_IiEE).
- The template function "Valid" (in original geesubs.cc)
- should actually be in the header file.
- This may fix the compilation error on ubuntu 11.10 too.
-
-2011-11-21 Jun Yan <jun.yan at uconn.edu>
-
- * Added an example to function relRisk.
-
-2011-11-21 Jun Yan <jun.yan at uconn.edu>
-
- * Added an example to function compCoef.
-
- * Changed the JSS paper year from 2005 to 2006 in CITATION.
-
-2011-11-16 Jun Yan <jun.yan at uconn.edu>
-
- * Added function relRisk for relative risk regression
- --- regression for binary response with log link.
-
- * Added function relRisk for relative risk regression
- --- regression for binary response with log link.
-
- * Added function compCoef for comparing coefficients
- of the same sets of covariates between nested models.
- This implements the method of Yan, Aseltine, and Harel
- (2011, JEBS); for independent data, the method reduces
- to Allison (1995, American Journal of Sociology).
-
- * Fixed a bug in c++ code in constructing the working
- covariance structure using the regression model of scale.
- Simulation tests show improved efficiency in mean parameter
- estimation when scale regression is present.
-
-2011-11-15 Soren Hojsgaard <sorenh at mail.dk>
-
- * Dependence on the doBy package has been removed.
-
-2011-11-14 Jun Yan <jun.yan at uconn.edu>
-
- * Added NAMESPACE for to comply with the requirement of R-2.14.0.
-
- * Removed the "assert" lines in utils.cc in order not to crash R,
- which is quite rude practice. A "-DNDEBUG" has been added to the
- cppflags in Makevars for a better solution. Due to many asserts
- in tnt, we cannot get rid of the NOTE message completely:
- Found ‘_ZSt4cerr’, possibly from ‘std::cerr’ (C++)
- Found ‘__assert_fail’, possibly from ‘assert’ (C)
-
- * Added quote in statements like
- extract(m, "response") to get rid of NOTE:
- geese: no visible binding for global variable ‘response’
-
- * Added a line of
- #undef NDEBUG
- to the beginning of geesubs.cc; thank Brian Ripley for the NMU.
- Still unclear why the error without this line:
- undefined symbol: _Z5ValidIiEN3TNT6VectorIT_EERS3_RNS1_IiEE
-
-
-2011-02-23 Søren Højsgaard <sorenh at agrsci.dk>
-
- * In geeglm is checked if the model matrix is rank deficient; if
- so then geeglm exits. Thanks to Jason D Thorpe for pointing this out.
-
- * Bug in anova fixed. Thanks to Stefan Boehringer for pointing
- this out.
-
- * Version 1.0-18 uploaded.
-
-
-2010-01-26 Søren Højsgaard <sorenh at agrsci.dk>
-
- * fixed2Zcor function has been added. This function makes it
- easier to work with a fixed correlation matrix (in particular when
- cluster sizes are not equal).
-
- * A vignette on models with unequal cluster size, fixed
- correlation matrices etc. has been added.
-
- * Version 1.0-17 uploaded
-
-2008-12-08 Søren Højsgaard <sorenh at agrsci.dk>
-
- * Bugfix in 1.0.15 caused problem in binomial case using
- cbind(pos,neg). Thanks to Tobias Verbeke. Fixed now.
-
- * Bugfix in 1.0.15 caused problem when using variables derived
- from gam package call to geeglm. Thanks to Eric Rexstad. Fixed now.
-
- * Using scale.fix argument gave problem in geeglm. Thanks to
- Tobias Verbeke. Fixed now.
-
- * Fitting large data set with binomial model and 3 measurements
- per unit using unstructured correlation crashes R. Thanks to
- Tobias Verbeke. Problem has *NOT* been solved but a remark has
- been added to doc file.
-
- * Version 1.0-16 uploaded
-
-2008-12-01 Søren Højsgaard <sorenh at agrsci.dk>
-
- * When a factor has unused levels, the underlying C code
- fails. This is now catured in geeglm. Thanks to Janet Young
-
- * tests directory added to package
-
- * Version 1.0-15 uploaded
-
-2007-07-13 Søren Højsgaard <sorenh at agrsci.dk>
-
- * Smaller 'standardization' changes implemented. Thanks to Achim
-
- * Version 1.0-14 uploaded
-
-2007-03-21 Søren Højsgaard <sorenh at agrsci.dk>
-
- * A remark on fixed correlation structures has been added to the
- geeglm.Rd doc file.
-
- * A Wishlist file has been added
-
- * Version 1.0-13 uploaded
-
-2007-03-21 Søren Højsgaard <sorenh at agrsci.dk>
-
- * Bug in geeglm fixed so that it now works with a fixed
- correlation structure. Thanks to Ulrich Halekoh for the fix.
-
-
-2006-02-13 Jun Yan <jyan at stat.uiowa.edu>
-
- * Bug in genZcor and genZodds fixed.
- Thanks to Chongzhi Di <cdi at jhsph.edu>.
- Previously, the matrice generated by genZcor/genZodds are
- wrong when the number of unique waves is greater than or
- equal to 10.
-
-2006-01-24 Søren Højsgaard <sorenh at agrsci.dk>
-
- * Bug in anova.geeglm fixed (showed up when there was only one
- term on the right hand side of ~).
-
- * geeglm only works on complete data. This has been pointed out in
- the man pages. (At some point of time, a proper na.action should be
- taken).
-
- * All datasets are saved as .txt files (previously some were saved
- as .rda files but that caused problems in building the package on
- windows xp).
-
-2005-08-13 Jun Yan <jyan at stat.uiowa.edu>
-
- * The working correlation structure can now be "fixed".
-
-
-2005-06-13 Søren Højsgaard <sorenh at agrsci.dk>
-
- * Søren Højsgaard has modified the geeglm function so that it can
- take the 'waves' argument which is used for explicitely specifying
- the ordering of repeated measurements on the same unit. geeglm can
- also take the 'zcor' argument for a user defined working
- correlation structure.
-
- * A documentation file for the genZcor
- function has been added.
-
- * All data sets provided are now saved as
- text files.
-
- * ordgee has been modified to check if the response variable is an
- ordered factor.
-
- * geeglm can now take the argument std.err which specifies the
- type of variance estimate to be calculated.
-
-2005-05-11 Søren Højsgaard <sorenh at agrsci.dk>
-
- * Søren Højsgaard has modified the anova function to make it
- calculate the correct degrees of freedom.
-
-
-2005-04-11 Jun Yan <jyan at stat.uiowa.edu>
-
- * Søren Højsgaard made some minor changes to geeglm -
- basically, that geese.control did not work. Now it does.
-
-
-2005-02-09 Jun Yan <jyan at stat.uiowa.edu>
-
- * Søren Højsgaard joined the development with geeglm, which
- "works like" glm and returns an object which is similar to
- a glm object. Residuals and predicted values can be extracted
- using the generic functions as with a glm object.
-
- * An important feature of geeglm, is that an anova method
- exists for these models.
-
+2014-09-13 Søren Højsgaard <sorenh at math.aau.dk>
+
+ * geeglm objects now inherits from lm also (to prevent warning
+ when calling predict).
+
+ * Version 1.2-1 uploaded
+
+2014-09-13 Søren Højsgaard <sorenh at math.aau.dk>
+
+ * Maintainer of geepack is now Søren Højsgaard
+
+ * Location of vignette fixed
+
+ * Version 1.2-0 uploaded
+
+2012-01-27 Jun Yan <jun.yan at uconn.edu>
+
+ * Commented out #undef NDEBUG in geesubs.cc.
+ * Added a VecPrint function in utils.cc to print DVector;
+ this replaces usage of cerr.
+
+2012-01-09 Jun Yan <jun.yan at uconn.edu>
+
+ * Thank Jeffrey Horner <jeffrey.horner at vanderbilt.edu>
+ and Cole Beck <cole.beck at vanderbilt.edu> for fixing the
+ undefined symbol error (see 2011-11-14 entry:
+ _Z5ValidIiEN3TNT6VectorIT_EERS3_RNS1_IiEE).
+ The template function "Valid" (in original geesubs.cc)
+ should actually be in the header file.
+ This may fix the compilation error on ubuntu 11.10 too.
+
+2011-11-21 Jun Yan <jun.yan at uconn.edu>
+
+ * Added an example to function relRisk.
+
+2011-11-21 Jun Yan <jun.yan at uconn.edu>
+
+ * Added an example to function compCoef.
+
+ * Changed the JSS paper year from 2005 to 2006 in CITATION.
+
+2011-11-16 Jun Yan <jun.yan at uconn.edu>
+
+ * Added function relRisk for relative risk regression
+ --- regression for binary response with log link.
+
+ * Added function relRisk for relative risk regression
+ --- regression for binary response with log link.
+
+ * Added function compCoef for comparing coefficients
+ of the same sets of covariates between nested models.
+ This implements the method of Yan, Aseltine, and Harel
+ (2011, JEBS); for independent data, the method reduces
+ to Allison (1995, American Journal of Sociology).
+
+ * Fixed a bug in c++ code in constructing the working
+ covariance structure using the regression model of scale.
+ Simulation tests show improved efficiency in mean parameter
+ estimation when scale regression is present.
+
+2011-11-15 Soren Hojsgaard <sorenh at mail.dk>
+
+ * Dependence on the doBy package has been removed.
+
+2011-11-14 Jun Yan <jun.yan at uconn.edu>
+
+ * Added NAMESPACE for to comply with the requirement of R-2.14.0.
+
+ * Removed the "assert" lines in utils.cc in order not to crash R,
+ which is quite rude practice. A "-DNDEBUG" has been added to the
+ cppflags in Makevars for a better solution. Due to many asserts
+ in tnt, we cannot get rid of the NOTE message completely:
+ Found ‘_ZSt4cerr’, possibly from ‘std::cerr’ (C++)
+ Found ‘__assert_fail’, possibly from ‘assert’ (C)
+
+ * Added quote in statements like
+ extract(m, "response") to get rid of NOTE:
+ geese: no visible binding for global variable ‘response’
+
+ * Added a line of
+ #undef NDEBUG
+ to the beginning of geesubs.cc; thank Brian Ripley for the NMU.
+ Still unclear why the error without this line:
+ undefined symbol: _Z5ValidIiEN3TNT6VectorIT_EERS3_RNS1_IiEE
+
+
+2011-02-23 Søren Højsgaard <sorenh at agrsci.dk>
+
+ * In geeglm is checked if the model matrix is rank deficient; if
+ so then geeglm exits. Thanks to Jason D Thorpe for pointing this out.
+
+ * Bug in anova fixed. Thanks to Stefan Boehringer for pointing
+ this out.
+
+ * Version 1.0-18 uploaded.
+
+
+2010-01-26 Søren Højsgaard <sorenh at agrsci.dk>
+
+ * fixed2Zcor function has been added. This function makes it
+ easier to work with a fixed correlation matrix (in particular when
+ cluster sizes are not equal).
+
+ * A vignette on models with unequal cluster size, fixed
+ correlation matrices etc. has been added.
+
+ * Version 1.0-17 uploaded
+
+2008-12-08 Søren Højsgaard <sorenh at agrsci.dk>
+
+ * Bugfix in 1.0.15 caused problem in binomial case using
+ cbind(pos,neg). Thanks to Tobias Verbeke. Fixed now.
+
+ * Bugfix in 1.0.15 caused problem when using variables derived
+ from gam package call to geeglm. Thanks to Eric Rexstad. Fixed now.
+
+ * Using scale.fix argument gave problem in geeglm. Thanks to
+ Tobias Verbeke. Fixed now.
+
+ * Fitting large data set with binomial model and 3 measurements
+ per unit using unstructured correlation crashes R. Thanks to
+ Tobias Verbeke. Problem has *NOT* been solved but a remark has
+ been added to doc file.
+
+ * Version 1.0-16 uploaded
+
+2008-12-01 Søren Højsgaard <sorenh at agrsci.dk>
+
+ * When a factor has unused levels, the underlying C code
+ fails. This is now catured in geeglm. Thanks to Janet Young
+
+ * tests directory added to package
+
+ * Version 1.0-15 uploaded
+
+2007-07-13 Søren Højsgaard <sorenh at agrsci.dk>
+
+ * Smaller 'standardization' changes implemented. Thanks to Achim
+
+ * Version 1.0-14 uploaded
+
+2007-03-21 Søren Højsgaard <sorenh at agrsci.dk>
+
+ * A remark on fixed correlation structures has been added to the
+ geeglm.Rd doc file.
+
+ * A Wishlist file has been added
+
+ * Version 1.0-13 uploaded
+
+2007-03-21 Søren Højsgaard <sorenh at agrsci.dk>
+
+ * Bug in geeglm fixed so that it now works with a fixed
+ correlation structure. Thanks to Ulrich Halekoh for the fix.
+
+
+2006-02-13 Jun Yan <jyan at stat.uiowa.edu>
+
+ * Bug in genZcor and genZodds fixed.
+ Thanks to Chongzhi Di <cdi at jhsph.edu>.
+ Previously, the matrice generated by genZcor/genZodds are
+ wrong when the number of unique waves is greater than or
+ equal to 10.
+
+2006-01-24 Søren Højsgaard <sorenh at agrsci.dk>
+
+ * Bug in anova.geeglm fixed (showed up when there was only one
+ term on the right hand side of ~).
+
+ * geeglm only works on complete data. This has been pointed out in
+ the man pages. (At some point of time, a proper na.action should be
+ taken).
+
+ * All datasets are saved as .txt files (previously some were saved
+ as .rda files but that caused problems in building the package on
+ windows xp).
+
+2005-08-13 Jun Yan <jyan at stat.uiowa.edu>
+
+ * The working correlation structure can now be "fixed".
+
+
+2005-06-13 Søren Højsgaard <sorenh at agrsci.dk>
+
+ * Søren Højsgaard has modified the geeglm function so that it can
+ take the 'waves' argument which is used for explicitely specifying
+ the ordering of repeated measurements on the same unit. geeglm can
+ also take the 'zcor' argument for a user defined working
+ correlation structure.
+
+ * A documentation file for the genZcor
+ function has been added.
+
+ * All data sets provided are now saved as
+ text files.
+
+ * ordgee has been modified to check if the response variable is an
+ ordered factor.
+
+ * geeglm can now take the argument std.err which specifies the
+ type of variance estimate to be calculated.
+
+2005-05-11 Søren Højsgaard <sorenh at agrsci.dk>
+
+ * Søren Højsgaard has modified the anova function to make it
+ calculate the correct degrees of freedom.
+
+
+2005-04-11 Jun Yan <jyan at stat.uiowa.edu>
+
+ * Søren Højsgaard made some minor changes to geeglm -
+ basically, that geese.control did not work. Now it does.
+
+
+2005-02-09 Jun Yan <jyan at stat.uiowa.edu>
+
+ * Søren Højsgaard joined the development with geeglm, which
+ "works like" glm and returns an object which is similar to
+ a glm object. Residuals and predicted values can be extracted
+ using the generic functions as with a glm object.
+
+ * An important feature of geeglm, is that an anova method
+ exists for these models.
+
diff --git a/DESCRIPTION b/DESCRIPTION
index 40aad1d..febe3e1 100755
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,7 +1,7 @@
Package: geepack
-Version: 1.2-0.2
+Version: 1.2-1
Title: Generalized Estimating Equation Package
-Author: S�ren H�jsgaard, <sorenh at math.aau.dk>, Ulrich Halekoh <Ulrich.Halekoh at agrsci.dk>, Jun Yan <jun.yan at uconn.edu>,
+Author: S�ren H�jsgaard <sorenh at math.aau.dk>, Ulrich Halekoh <uhalekoh at health.sdu.dk>, Jun Yan <jun.yan at uconn.edu>,
Maintainer: S�ren H�jsgaard <sorenh at math.aau.dk>
Description: Generalized estimating equations solver for parameters in
mean, scale, and correlation structures, through mean link,
@@ -9,7 +9,7 @@ Description: Generalized estimating equations solver for parameters in
categorical responses.
Encoding: latin1
License: GPL (>= 3)
-Packaged: 2016-07-05 15:56:10 UTC; hornik
NeedsCompilation: yes
Repository: CRAN
-Date/Publication: 2016-07-05 17:59:21
+Date/Publication: 2016-09-24 14:55:58
+Packaged: 2016-09-24 05:46:03 UTC; sorenh
diff --git a/MD5 b/MD5
index 2714efa..26f0402 100644
--- a/MD5
+++ b/MD5
@@ -1,16 +1,16 @@
-706152b8be6d8b2ca3a5ebdc9fcd8c1e *ChangeLog
-ec1c80280fc44e97494d187a174a30b9 *DESCRIPTION
+485717a6bcd79cfee5c8130b340b7107 *ChangeLog
+8158f7a25a1908fc5a7a1fa8e4f65279 *DESCRIPTION
9b4a39760a174ec40ed5183e8fa9b61e *NAMESPACE
96a6f5b5b46df0f9d3ac6bbc3327eada *R/fixed2Zcor.R
-59e982dac0a9e5004b8290399c2a5e6d *R/geeglm-anova.R
-e075605e7afd684200939ab63ae6be13 *R/geeglm.R
+2a5a192949fdf6c226c19a1335a93d7d *R/geeglm-anova.R
+ce8483fad59bb3a10903f4898a876a02 *R/geeglm.R
b94677c4ba59797bb1c64a93764f6bb4 *R/geese.R
a5e17a48d8e1196aa1967d5758168a0e *R/internal.R
5d7cd7bfb2a2135f7364dda2382de8f1 *R/ordgee.R
acf18753c22de2282b9a8357b7c06688 *R/rrr.R
8abbb54ea36f442f6bd9e47e89f4818b *R/summary.R
4b5e3c63a382021749596cb59f04c62d *R/zzz.R
-be0bab57cd047145f8af1e91a04c5d3f *build/vignette.rds
+1f50f1c5c3f2180afad0be4fa010dfc0 *build/vignette.rds
8ef0a085392c2a6431f2f8713c60e5b5 *data/dietox.txt.gz
249971f8780df82504f54fd2b7d62252 *data/koch.txt.gz
c0e0807be2abed83152006db8dcbac5e *data/ohio.txt.gz
@@ -19,7 +19,7 @@ c0e0807be2abed83152006db8dcbac5e *data/ohio.txt.gz
d1e03752404477a70ed20c18d257e2d8 *data/seizure.txt.gz
9cb003db408b585e3cb11806f35919a7 *data/sitka89.txt.gz
73402330ab3f5a9b06fdf6343631e87d *data/spruce.txt.gz
-22d3dc7ffaa61d9124aa62db9bfe582f *inst/CITATION
+35da58fa0c087431c54e28f4a5d27be0 *inst/CITATION
c01cea3c88238c320844d0d7649fc72f *inst/doc/geepack-manual.R
3be52b7e7574dc6e40ca55938a8b3069 *inst/doc/geepack-manual.Rnw
3a0bccf41d745a5d12f34922d6a87379 *inst/doc/geepack-manual.pdf
diff --git a/R/geeglm-anova.R b/R/geeglm-anova.R
index b89ec9c..512d54b 100755
--- a/R/geeglm-anova.R
+++ b/R/geeglm-anova.R
@@ -10,7 +10,7 @@ anovageePrim2 <- function(m1, m2,...){
m2inm1 <- all(apply(e2,2,var) < 1e-10)
m1inm2 <- all(apply(e1,2,var) < 1e-10)
-
+
if (!any(c(m2inm1,m1inm2)))
cat("Models not nested\n")
else
@@ -52,8 +52,10 @@ anovageePrim2 <- function(m1, m2,...){
m1call$weights <- m1$weights
m1call$formula <- formula1
m1call$data <- nymm1
+
m1ny <- eval(m1call)
+
## Calculate wald statistic
beta <- coef(m1ny)
vbeta <- summary(m1ny)$cov.unscaled
@@ -88,7 +90,7 @@ anova.geeglmlist <-
warning("Models with response ", deparse(responses[!sameresp]),
" removed because response differs from ", "model 1")
}
-
+
ns <- sapply(object, function(x) length(x$residuals))
if (any(ns != ns[1]))
stop("models were not all fitted to the same size of dataset")
@@ -99,7 +101,7 @@ anova.geeglmlist <-
m2 <- objects[[1]][[2]]
else
m2 <- NULL
-
+
value <- anovageePrim2(m1,m2)
return(value)
}
@@ -107,7 +109,8 @@ anova.geeglmlist <-
anova.geeglm<-function (object, ..., dispersion = NULL, test = NULL)
{
- dotargs <- list(...)
+
+ dotargs <- list(...)
named <- if (is.null(names(dotargs)))
rep(FALSE, length(dotargs))
else (names(dotargs) != "")
@@ -117,10 +120,11 @@ anova.geeglm<-function (object, ..., dispersion = NULL, test = NULL)
dotargs <- dotargs[!named]
is.glm <- unlist(lapply(dotargs, function(x) inherits(x, "glm")))
dotargs <- dotargs[is.glm]
- if (length(dotargs) > 0)
+
+ if (length(dotargs) > 0)
return(anova.geeglmlist(c(list(object), dotargs), dispersion = dispersion,
test = test))
-
+
varlist <- attr(object$terms, "variables")
##print(varlist)
x <- if (n <- match("x", names(object), 0))
@@ -128,7 +132,8 @@ anova.geeglm<-function (object, ..., dispersion = NULL, test = NULL)
else model.matrix(object)
varseq <- attr(x, "assign")
-
+
+
nvars <- max(0, varseq)
betaList <- vbetaList <- NULL
diff --git a/R/geeglm.R b/R/geeglm.R
index 8ea0838..6b5a237 100755
--- a/R/geeglm.R
+++ b/R/geeglm.R
@@ -175,7 +175,7 @@ geeglm<- function (formula, family = gaussian, data = parent.frame(),
value$cor.link <- ans$model$cor.link
value$control <- ans$control
value$std.err <- std.err
- class(value) <- c("geeglm", "gee", "glm")
+ class(value) <- c("geeglm", "gee", "glm", "lm")
return(value)
}
diff --git a/build/vignette.rds b/build/vignette.rds
index 1a8d1d3..d9169f0 100644
Binary files a/build/vignette.rds and b/build/vignette.rds differ
diff --git a/inst/CITATION b/inst/CITATION
index 2d50b45..3bc2e52 100755
--- a/inst/CITATION
+++ b/inst/CITATION
@@ -1,44 +1,44 @@
-citHeader("To cite geepack in publications use:")
-
-citEntry(entry="Article",
- title = "The R Package geepack for Generalized Estimating Equations",
- author = personList(as.person("S�ren H�jsgaard"),
- as.person("Ulrich Halekoh"),
- as.person("Jun Yan")),
- year = 2006,
- journal = "Journal of Statistical Software",
- volume = "15/2",
- pages = "1--11",
- textVersion =
- paste("H�jsgaard, S., Halekoh, U. & Yan J. (2006)",
- "The R Package geepack for Generalized Estimating Equations",
- "Journal of Statistical Software, 15, 2, pp1--11")
-)
-
-
-citEntry(entry="Article",
- title = "Estimating Equations for Association Structures",
- author = personList(as.person("Jun Yan"),
- as.person("Jason P. Fine")),
- year = "2004",
- journal = "Statistics in Medicine",
- volume = "23",
- pages = "859--880",
- textVersion =
- paste("Yan, J. & Fine, J.P. (2004)",
- "Estimating Equations for Association Structures",
- "Statistics in Medicine, 23, pp859--880.")
-)
-
-citEntry(entry="Article",
- title = "geepack: Yet Another Package for Generalized Estimating Equations",
- author = personList(as.person("Jun Yan")),
- year = "2002",
- journal = "R-News",
- volume = "2/3",
- pages = "12--14",
- textVersion =
- paste("Yan, J (2002)",
- "geepack: Yet Another Package for Generalized Estimating Equations",
- "R-News, 2/3, pp12-14.")
-)
+citHeader("To cite geepack in publications use:")
+
+citEntry(entry="Article",
+ title = "The R Package geepack for Generalized Estimating Equations",
+ author = personList(as.person("Søren Højsgaard"),
+ as.person("Ulrich Halekoh"),
+ as.person("Jun Yan")),
+ year = 2006,
+ journal = "Journal of Statistical Software",
+ volume = "15/2",
+ pages = "1--11",
+ textVersion =
+ paste("Højsgaard, S., Halekoh, U. & Yan J. (2006)",
+ "The R Package geepack for Generalized Estimating Equations",
+ "Journal of Statistical Software, 15, 2, pp1--11")
+)
+
+
+citEntry(entry="Article",
+ title = "Estimating Equations for Association Structures",
+ author = personList(as.person("Jun Yan"),
+ as.person("Jason P. Fine")),
+ year = "2004",
+ journal = "Statistics in Medicine",
+ volume = "23",
+ pages = "859--880",
+ textVersion =
+ paste("Yan, J. & Fine, J.P. (2004)",
+ "Estimating Equations for Association Structures",
+ "Statistics in Medicine, 23, pp859--880.")
+)
+
+citEntry(entry="Article",
+ title = "geepack: Yet Another Package for Generalized Estimating Equations",
+ author = personList(as.person("Jun Yan")),
+ year = "2002",
+ journal = "R-News",
+ volume = "2/3",
+ pages = "12--14",
+ textVersion =
+ paste("Yan, J (2002)",
+ "geepack: Yet Another Package for Generalized Estimating Equations",
+ "R-News, 2/3, pp12-14.")
+)
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/r-cran-geepack.git
More information about the debian-science-commits
mailing list