[pyfai] 04/22: Merge tag 'upstream/0.12.0+dfsg'
Frédéric-Emmanuel Picca
picca at moszumanska.debian.org
Wed Jun 8 14:33:55 UTC 2016
This is an automated email from the git hooks/post-receive script.
picca pushed a commit to annotated tag debian/0.12.0+dfsg-1
in repository pyfai.
commit a36ae1e3e35430e6ab6fb5870d2ba9ac8155dcd7
Merge: f040225 7e1d7e8
Author: Picca Frédéric-Emmanuel <picca at synchrotron-soleil.fr>
Date: Tue Jun 7 11:34:22 2016 +0200
Merge tag 'upstream/0.12.0+dfsg'
Upstream version 0.12.0+dfsg
MANIFEST.in | 22 +-
PKG-INFO | 242 +-
README.txt => README.rst | 166 +-
TODO.txt | 3 +-
benchmark/benchmark.py | 43 +-
benchmark/benchmark_distortion.py | 35 +-
benchmark/benchmark_ocl_csr3.py | 73 +-
benchmark/benchmark_split.py | 27 +-
bootstrap.py | 156 +
build-deb.sh | 32 -
build-deb7.sh | 58 +
build-deb8.sh | 112 +
calibration/Al.D | 17 +
calibration/Si.D | 693 +
calibration/moke.D | 11 +
copyright | 163 +
doc/check_calib.1 | 2 +-
doc/diff_map.1 | 95 +
doc/diff_map.pdf | Bin 0 -> 5933 bytes
doc/diff_tomo.1 | 16 +-
doc/diff_tomo.pdf | Bin 5773 -> 5845 bytes
doc/pyFAI-recalib.1 | 2 +-
doc/pyFAI.pdf | Bin 1478137 -> 5048164 bytes
doc/source/api/pyFAI.rst | 7 +
doc/source/biblio.rst | 3 +
doc/source/calibration.rst | 78 +-
doc/source/changelog.rst | 287 +-
doc/source/conf.py | 8 +-
doc/source/coverage.rst | 38 +
doc/source/detector.rst | 44 +-
doc/source/ecosystem.rst | 54 +-
doc/source/geometry.rst | 21 +-
doc/source/index.rst | 45 +-
doc/source/man/diff_map.rst | 100 +
doc/source/man/diff_tomo.rst | 4 +-
doc/source/man/diffmap_integrate.png | Bin 0 -> 64703 bytes
doc/source/man/diffmap_main.png | Bin 0 -> 72236 bytes
doc/source/man/diffmap_running.png | Bin 0 -> 47217 bytes
doc/source/man/pyFAI-saxs.rst | 30 +-
doc/source/man/pyFAI-waxs.rst | 40 +-
doc/source/man/scripts.rst | 15 +-
doc/source/operations/index.rst | 73 +-
doc/source/operations/linux.rst | 119 +-
doc/source/operations/macosx.rst | 88 +-
doc/source/operations/windows.rst | 179 +-
doc/source/project.rst | 278 +-
doc/source/publications.rst | 28 +
doc/source/pyFAI.rst | 46 +-
doc/source/usage/cookbook/calibrate.rst | 185 +-
doc/source/usage/cookbook/fabio_viewer.png | Bin 0 -> 331769 bytes
doc/source/usage/cookbook/index.rst | 11 +-
.../usage/cookbook/integration_with_python.rst | 8 +-
.../usage/cookbook/integration_with_scripts.rst | 7 +-
.../usage/cookbook/integration_with_the_gui.rst | 16 +-
doc/source/usage/cookbook/pyFAI-calib_1.png | Bin 0 -> 148816 bytes
doc/source/usage/cookbook/pyFAI-calib_2.png | Bin 0 -> 265373 bytes
doc/source/usage/cookbook/pyFAI-calib_3.png | Bin 0 -> 263424 bytes
doc/source/usage/cookbook/pyFAI-calib_4.png | Bin 0 -> 103936 bytes
doc/source/usage/cookbook/pyFAI-calib_5.png | Bin 0 -> 129084 bytes
.../tutorial/CCD_Calibration/CCD_calibration.ipynb | 1433 +
.../tutorial/CCD_Calibration/CCD_calibration.rst | 937 +
.../tutorial/CCD_Calibration/frelonID22_grid.edf | Bin 0 -> 8389632 bytes
.../usage/tutorial/CCD_Calibration/output_12_1.png | Bin 0 -> 24096 bytes
.../usage/tutorial/CCD_Calibration/output_13_1.png | Bin 0 -> 5108 bytes
.../usage/tutorial/CCD_Calibration/output_14_1.png | Bin 0 -> 10247 bytes
.../usage/tutorial/CCD_Calibration/output_18_1.png | Bin 0 -> 4763 bytes
.../usage/tutorial/CCD_Calibration/output_21_1.png | Bin 0 -> 40311 bytes
.../usage/tutorial/CCD_Calibration/output_24_1.png | Bin 0 -> 42454 bytes
.../usage/tutorial/CCD_Calibration/output_29_1.png | Bin 0 -> 7318 bytes
.../usage/tutorial/CCD_Calibration/output_39_1.png | Bin 0 -> 12328 bytes
.../usage/tutorial/CCD_Calibration/output_45_1.png | Bin 0 -> 47986 bytes
.../usage/tutorial/CCD_Calibration/output_48_1.png | Bin 0 -> 53724 bytes
.../usage/tutorial/CCD_Calibration/output_4_1.png | Bin 0 -> 36584 bytes
.../usage/tutorial/CCD_Calibration/output_50_1.png | Bin 0 -> 55386 bytes
.../usage/tutorial/CCD_Calibration/output_54_1.png | Bin 0 -> 102376 bytes
.../usage/tutorial/CCD_Calibration/output_5_1.png | Bin 0 -> 6172 bytes
.../usage/tutorial/CCD_Calibration/output_6_1.png | Bin 0 -> 9119 bytes
.../usage/tutorial/CCD_Calibration/output_8_1.png | Bin 0 -> 2925 bytes
doc/source/usage/tutorial/Calibrant/index.ipynb | 369 +
doc/source/usage/tutorial/Calibrant/index.rst | 236 +
.../usage/tutorial/Calibrant/output_11_0.png | Bin 0 -> 213686 bytes
.../usage/tutorial/Calibrant/output_14_0.png | Bin 0 -> 63788 bytes
.../usage/tutorial/Calibrant/output_16_1.png | Bin 0 -> 127324 bytes
.../usage/tutorial/Distortion/Distortion.ipynb | 645 +
.../usage/tutorial/Distortion/Distortion.rst | 489 +
.../usage/tutorial/Distortion/output_17_2.png | Bin 0 -> 103981 bytes
.../usage/tutorial/Distortion/output_21_1.png | Bin 0 -> 373478 bytes
.../usage/tutorial/Distortion/output_23_2.png | Bin 0 -> 121137 bytes
.../usage/tutorial/Distortion/output_6_2.png | Bin 0 -> 3754 bytes
.../usage/tutorial/Introduction/introduction.ipynb | 670 +
.../usage/tutorial/Introduction/introduction.rst | 511 +
.../usage/tutorial/Introduction/output_15_1.png | Bin 0 -> 15780 bytes
.../usage/tutorial/Introduction/output_19_1.png | Bin 0 -> 22149 bytes
.../usage/tutorial/Introduction/output_21_2.png | Bin 0 -> 17258 bytes
.../usage/tutorial/Introduction/output_6_1.png | Bin 0 -> 22448 bytes
.../usage/tutorial/Introduction/output_8_1.png | Bin 0 -> 22378 bytes
doc/source/usage/tutorial/MakeCalibrant/LaB6.D | 1444 +
doc/source/usage/tutorial/MakeCalibrant/Po.D | 13 +
.../tutorial/MakeCalibrant/make_calibrant.ipynb | 517 +
.../tutorial/MakeCalibrant/make_calibrant.rst | 361 +
.../MultiGeometry-checkpoint.ipynb | 752 +
.../tutorial/MultiGeometry/MultiGeometry.ipynb | 928 +
doc/source/usage/tutorial/MultiGeometry/index.rst | 558 +
.../usage/tutorial/MultiGeometry/output_10_1.png | Bin 0 -> 53057 bytes
.../usage/tutorial/MultiGeometry/output_12_1.png | Bin 0 -> 10317 bytes
.../usage/tutorial/MultiGeometry/output_16_1.png | Bin 0 -> 26599 bytes
.../usage/tutorial/MultiGeometry/output_21_1.png | Bin 0 -> 15720 bytes
.../usage/tutorial/MultiGeometry/output_22_0.png | Bin 0 -> 35494 bytes
.../usage/tutorial/MultiGeometry/output_25_1.png | Bin 0 -> 45102 bytes
.../usage/tutorial/MultiGeometry/output_26_1.png | Bin 0 -> 8725 bytes
.../usage/tutorial/MultiGeometry/output_28_1.png | Bin 0 -> 24583 bytes
.../usage/tutorial/MultiGeometry/output_29_0.png | Bin 0 -> 36427 bytes
.../usage/tutorial/MultiGeometry/output_31_2.png | Bin 0 -> 20785 bytes
.../usage/tutorial/MultiGeometry/output_32_1.png | Bin 0 -> 15793 bytes
.../usage/tutorial/MultiGeometry/output_35_1.png | Bin 0 -> 26890 bytes
.../usage/tutorial/MultiGeometry/output_36_2.png | Bin 0 -> 33853 bytes
.../usage/tutorial/MultiGeometry/output_38_3.png | Bin 0 -> 21599 bytes
doc/source/usage/tutorial/Variance/Variance.ipynb | 720 +
doc/source/usage/tutorial/index.rst | 29 +-
doc/source/usage/tutorial/multi-geometry.rst | 83 +
gui/diffmap.ui | 391 +
gui/integration.ui | 2 +-
openCL/bitonic.cl | 57 +-
openCL/bsort.cl | 261 -
openCL/for_eclipse.h | 27 +
openCL/preprocess.cl | 11 +-
openCL/separate.cl | 135 +
package/debian/changelog | 55 +
package/debian/compat | 1 +
package/debian/control | 248 +
package/debian/gbp.conf | 2 +
package/debian/python-pyfai-doc.doc-base | 9 +
package/debian/rules | 48 +
package/debian/source/format | 1 +
package/debian/watch | 5 +
pyFAI-src/OCLFullSplit1D_template.py | 146 -
pyFAI-src/integrate_widget.py | 757 -
pyFAI-src/units.py | 109 -
pyFAI.egg-info/PKG-INFO | 242 +-
pyFAI.egg-info/SOURCES.txt | 568 +-
pyFAI.egg-info/requires.txt | 5 +
pyFAI.egg-info/top_level.txt | 22 -
{pyFAI-src => pyFAI}/OCLFullSplit.py | 76 +-
{pyFAI-src => pyFAI}/__init__.py | 46 +-
{pyFAI-src => pyFAI}/azimuthalIntegrator.py | 322 +-
.../benchmark.py => pyFAI/benchmark/__init__.py | 304 +-
{pyFAI-src => pyFAI}/blob_detection.py | 198 +-
{pyFAI-src => pyFAI}/calibrant.py | 186 +-
{pyFAI-src => pyFAI}/calibration.py | 561 +-
pyFAI/decorators.py | 75 +
{pyFAI-src => pyFAI}/detectors.py | 955 +-
pyFAI/diffmap.py | 516 +
pyFAI/diffmap_widget.py | 533 +
{pyFAI-src => pyFAI}/directories.py | 0
{pyFAI-src => pyFAI}/distortion.py | 328 +-
pyFAI/ext/__init__.py | 0
{src => pyFAI/ext}/_bispev.c | 670 +-
{src => pyFAI/ext}/_bispev.pyx | 0
{src => pyFAI/ext}/_blob.c | 590 +-
{src => pyFAI/ext}/_blob.pyx | 0
{src => pyFAI/ext}/_convolution.c | 7270 +--
{src => pyFAI/ext}/_convolution.pyx | 50 +-
{src => pyFAI/ext}/_distortion.c | 45781 +++++++++++--------
pyFAI/ext/_distortion.pyx | 1333 +
{src => pyFAI/ext}/_distortionCSR.c | 10978 +++--
{src => pyFAI/ext}/_geometry.c | 12635 +++--
pyFAI/ext/_geometry.pyx | 561 +
pyFAI/ext/_tree.c | 7027 +++
pyFAI/ext/_tree.pyx | 154 +
{src => pyFAI/ext}/bilinear.c | 24174 +++++-----
{src => pyFAI/ext}/bilinear.pxi | 2 +-
{src => pyFAI/ext}/bilinear.pyx | 63 +-
pyFAI/ext/crc32.pxd | 27 +
{src => pyFAI/ext}/fastcrc.c | 498 +-
pyFAI/ext/fastcrc.pyx | 47 +
src/marchingsquares.c => pyFAI/ext/histogram.c | 8595 ++--
pyFAI/ext/histogram.pyx | 44 +
{src => pyFAI/ext}/histogram_nomp.pxi | 68 +-
{src => pyFAI/ext}/histogram_omp.pxi | 77 +-
src/_geometry.c => pyFAI/ext/marchingsquares.c | 16676 +++----
{src => pyFAI/ext}/marchingsquares.pyx | 67 +-
{src => pyFAI/ext}/morphology.c | 6638 ++-
{src => pyFAI/ext}/morphology.pyx | 58 +-
{src => pyFAI/ext}/numpy_common.pxi | 0
{src => pyFAI/ext}/reconstruct.c | 6861 ++-
{src => pyFAI/ext}/reconstruct.pyx | 57 +-
pyFAI/ext/regrid_common.pxi | 59 +
{src => pyFAI/ext}/relabel.c | 6859 +--
{src => pyFAI/ext}/relabel.pyx | 14 +-
pyFAI/ext/sparse_common.pxi | 42 +
src/sparse_csr.c => pyFAI/ext/sparse_utils.c | 16878 ++++---
pyFAI/ext/sparse_utils.pyx | 112 +
{src => pyFAI/ext}/splitBBox.c | 10713 +++--
{src => pyFAI/ext}/splitBBox.pyx | 283 +-
.../ext/splitBBoxCSR.c | 34720 ++++++++------
{src => pyFAI/ext}/splitBBoxCSR.pyx | 77 +-
{src => pyFAI/ext}/splitBBoxLUT.c | 7065 +--
{src => pyFAI/ext}/splitBBoxLUT.pyx | 55 +-
{src => pyFAI/ext}/splitPixel.c | 11038 +++--
{src => pyFAI/ext}/splitPixel.pyx | 56 +-
{src => pyFAI/ext}/splitPixelFull.c | 10982 +++--
{src => pyFAI/ext}/splitPixelFull.pyx | 53 +-
{src => pyFAI/ext}/splitPixelFullCSR.c | 27475 ++++++-----
{src => pyFAI/ext}/splitPixelFullCSR.pyx | 74 +-
{src => pyFAI/ext}/splitPixelFullLUT.c | 13189 +++---
{src => pyFAI/ext}/splitPixelFullLUT.pyx | 56 +-
{src => pyFAI/ext}/splitPixelFullLUT_double.c | 2406 +-
{src => pyFAI/ext}/splitPixelFullLUT_double.pyx | 44 +-
pyFAI/ext/src/cpuid.c | 33 +
{src => pyFAI/ext/src}/crc32.c | 20 +
pyFAI/ext/src/crc32.h | 23 +
{src => pyFAI/ext}/watershed.c | 2359 +-
{src => pyFAI/ext}/watershed.pyx | 8 +-
{pyFAI-src => pyFAI}/geometry.py | 1115 +-
{pyFAI-src => pyFAI}/geometryRefinement.py | 73 +-
{pyFAI-src => pyFAI}/grid.py | 15 +-
{pyFAI-src => pyFAI}/gui_utils.py | 37 +-
pyFAI/integrate_widget.py | 764 +
{pyFAI-src => pyFAI}/io.py | 168 +-
{pyFAI-src => pyFAI}/massif.py | 40 +-
{pyFAI-src => pyFAI}/multi_geometry.py | 89 +-
{pyFAI-src => pyFAI}/ocl_azim.py | 13 +-
{pyFAI-src => pyFAI}/ocl_azim_csr.py | 83 +-
{pyFAI-src => pyFAI}/ocl_azim_csr_dis.py | 2 +-
{pyFAI-src => pyFAI}/ocl_azim_lut.py | 65 +-
{pyFAI-src => pyFAI}/ocl_hist_pixelsplit.py | 6 +-
pyFAI/ocl_sort.py | 354 +
{pyFAI-src => pyFAI}/opencl.py | 53 +-
pyFAI/orderedset.py | 93 +
{pyFAI-src => pyFAI}/peak_picker.py | 125 +-
{pyFAI-src => pyFAI}/processor.py | 18 +-
{pyFAI-src => pyFAI}/refinment2D.py | 2 +-
{pyFAI-src => pyFAI}/spline.py | 47 +-
pyFAI/test/__init__.py | 62 +
pyFAI/test/test_all.py | 121 +
{test => pyFAI/test}/test_azimuthal_integrator.py | 119 +-
{test => pyFAI/test}/test_bilinear.py | 77 +-
{test => pyFAI/test}/test_bispev.py | 69 +-
pyFAI/test/test_blob_detection.py | 100 +
pyFAI/test/test_bug_regression.py | 197 +
{test => pyFAI/test}/test_calibrant.py | 124 +-
pyFAI/test/test_convolution.py | 97 +
{test => pyFAI/test}/test_csr.py | 79 +-
{test => pyFAI/test}/test_detector.py | 51 +-
pyFAI/test/test_distortion.py | 260 +
pyFAI/test/test_dummy.py | 62 +
{test => pyFAI/test}/test_export.py | 96 +-
{test => pyFAI/test}/test_flat.py | 96 +-
pyFAI/test/test_geometry.py | 381 +
{test => pyFAI/test}/test_geometry_refinement.py | 86 +-
{test => pyFAI/test}/test_histogram.py | 255 +-
{test => pyFAI/test}/test_integrate.py | 95 +-
pyFAI/test/test_integrate_widget.py | 168 +
{test => pyFAI/test}/test_io.py | 109 +-
pyFAI/test/test_marchingsquares.py | 75 +
{test => pyFAI/test}/test_mask.py | 129 +-
pyFAI/test/test_multi_geometry.py | 166 +
pyFAI/test/test_ocl_sort.py | 133 +
{test => pyFAI/test}/test_openCL.py | 102 +-
{test => pyFAI/test}/test_peak_picking.py | 119 +-
pyFAI/test/test_polarization.py | 109 +
{test => pyFAI/test}/test_saxs.py | 101 +-
pyFAI/test/test_sparse.py | 143 +
{test => pyFAI/test}/test_split_pixel.py | 102 +-
pyFAI/test/test_utils.py | 175 +
pyFAI/test/test_watershed.py | 75 +
pyFAI/test/test_worker.py | 199 +
{test => pyFAI/test}/utilstest.py | 256 +-
pyFAI/tree.py | 207 +
pyFAI/units.py | 241 +
{pyFAI-src => pyFAI}/utils.py | 70 +-
{pyFAI-src => pyFAI}/worker.py | 170 +-
run_tests.py | 375 +
scripts/{pyFAI-calib => diff_map} | 51 +-
scripts/diff_tomo | 283 +-
scripts/pyFAI-average | 12 +-
scripts/pyFAI-benchmark | 102 +
scripts/pyFAI-calib | 11 +-
scripts/pyFAI-integrate | 37 +-
scripts/pyFAI-saxs | 37 +-
scripts/pyFAI-waxs | 26 +-
scripts/refine_wavelength | 188 -
setup.py | 238 +-
src/_distortion.pyx | 1210 -
src/_distortionCSR.pyx | 533 -
src/_geometry.pyx | 355 -
src/crc32.h | 4 -
src/crc32.pxd | 6 -
src/fastcrc.pyx | 46 -
src/histogram.c | 21790 ---------
src/histogram.pyx | 4 -
src/paraSplitBBox.pyx | 456 -
src/regrid_common.pxi | 58 -
src/sparse_csr.pyx | 65 -
src/splitBBoxCSR.c | 38087 ---------------
src/splitBBoxLUT_vector.pyx | 1108 -
src/splitPixelFullLUT_b.c | 26701 -----------
src/splitPixelFullLUT_b.pyx | 975 -
src/splitPixelFullLUT_float32_b.c | 26712 -----------
src/splitPixelFullLUT_float32_b.pyx | 1018 -
src/xutils.c | 7224 ---
src/xutils.pyx | 122 -
stdeb.cfg | 3 -
test/__init__.py | 58 -
test/all_testimages.json | 1 -
test/blob.py | 132 -
test/bug-1280.py | 21 -
test/bug_ocl_cpu.py | 5 -
test/check_calib.py | 188 -
test/chi_square.py | 60 -
test/chi_square_ds8.py | 72 -
test/debug_ocl_sort.py | 30 -
test/debug_split_pixel.py | 22 -
test/fai_cfg.json | 4 -
test/lima_cfg.json | 1 -
test/mactrace.py | 55 -
test/memleak.py | 66 -
test/moke.poni | 10 -
test/profileDistortionCSR.py | 144 -
test/profile_OCLFullSplit.py | 39 -
test/profile_csr.py | 64 -
test/profile_csr_2d.py | 39 -
test/profile_csr_all_platforms.py | 68 -
test/profile_csr_fullsplit.py | 45 -
test/profile_csr_padded_csr.py | 127 -
test/profile_hdf5.py | 88 -
test/profile_lut_pixelsplitFull.py | 203 -
test/profile_ocl_hist_pixelsplit.py | 127 -
test/profile_ocl_lut.py | 112 -
test/profile_ocl_lut_pixelsplit.py | 209 -
test/profile_ocl_lut_pixelsplit2.py | 188 -
test/profile_ocl_lut_pixelsplit3.py | 169 -
test/profile_pixelsplitFull.py | 207 -
test/profile_pixelsplitFullLUT.py | 124 -
test/profile_pixelsplitFullLUT2.py | 126 -
test/profile_splitPixelFullLUT.py | 60 -
test/splitpixel_vs_splitpixelfull.py | 20 -
test/test_all.py | 116 -
test/test_blob_detection.py | 95 -
test/test_bug_regression.py | 95 -
test/test_convolution.py | 88 -
test/test_distortion.py | 108 -
test/test_dummy.py | 59 -
test/test_geometry.py | 240 -
test/test_marchingsquares.py | 74 -
test/test_multi_geometry.py | 125 -
test/test_polarization.py | 105 -
test/test_sparse.py | 87 -
test/test_utils.py | 170 -
test/test_watershed.py | 74 -
test/testimages/Frelon2k.poni | 10 -
test/testimages/LaB6.poni | 10 -
test/testimages/Pilatus1M.poni | 10 -
test/testimages/Pilatus6M.poni | 10 -
test/testimages/halfccd.poni | 10 -
pyFAI-src/_version.py => version.py | 41 +-
356 files changed, 200185 insertions(+), 257872 deletions(-)
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