[ufl] branch master updated (a597149 -> c76fdfc)
Johannes Ring
johannr-guest at moszumanska.debian.org
Fri Jun 24 11:55:34 UTC 2016
This is an automated email from the git hooks/post-receive script.
johannr-guest pushed a change to branch master
in repository ufl.
from a597149 upload 1.6.0-2 to unstable
new e5f5860 Imported Upstream version 2016.1.0
new dc232b0 Merge tag 'upstream/2016.1.0'
new c76fdfc Release 2016.1.0-1
The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.gitignore | 5 +
ChangeLog | 21 +
README | 37 +-
debian/changelog | 6 +
doc/sphinx/Makefile | 77 +-
doc/sphinx/README | 31 +-
.../NavierStokes.ufl => doc/sphinx/generate-apidoc | 25 +-
doc/sphinx/scripts/README_generate_modules.rst | 29 -
doc/sphinx/scripts/generate_index.py | 97 --
doc/sphinx/scripts/generate_modules.py | 269 ---
doc/sphinx/source/_themes/fenics/README | 2 -
doc/sphinx/source/_themes/fenics/layout.html | 69 -
.../source/_themes/fenics/static/alert_info_32.png | Bin 1168 -> 0 bytes
.../_themes/fenics/static/alert_warning_32.png | Bin 1060 -> 0 bytes
.../source/_themes/fenics/static/bg-page.png | Bin 181 -> 0 bytes
.../source/_themes/fenics/static/bullet_orange.png | Bin 365 -> 0 bytes
doc/sphinx/source/_themes/fenics/static/dolfin.png | Bin 571 -> 0 bytes
doc/sphinx/source/_themes/fenics/static/dorsal.png | Bin 3342 -> 0 bytes
.../source/_themes/fenics/static/fenics.css_t | 388 -----
.../source/_themes/fenics/static/unknown.png | Bin 2802 -> 0 bytes
doc/sphinx/source/_themes/fenics/theme.conf | 12 -
doc/sphinx/source/api-doc/modules.rst | 7 +
doc/sphinx/source/api-doc/ufl.algorithms.rst | 270 +++
doc/sphinx/source/api-doc/ufl.core.rst | 70 +
doc/sphinx/source/api-doc/ufl.corealg.rst | 38 +
doc/sphinx/source/api-doc/ufl.finiteelement.rst | 118 ++
doc/sphinx/source/api-doc/ufl.formatting.rst | 54 +
doc/sphinx/source/api-doc/ufl.rst | 354 ++++
doc/sphinx/source/api-doc/ufl.utils.rst | 102 ++
doc/sphinx/source/conf.py | 162 +-
doc/sphinx/source/index.rst | 110 ++
doc/sphinx/source/releases.rst | 8 +
doc/sphinx/source/releases/next.rst | 11 +
doc/sphinx/source/releases/v1.6.0.rst | 31 +
doc/sphinx/source/user/algorithms.rst | 417 +++++
doc/sphinx/source/user/command_line_utils.rst | 48 +
doc/sphinx/source/user/examples.rst | 545 ++++++
doc/sphinx/source/user/form_language.rst | 1738 ++++++++++++++++++++
doc/sphinx/source/user/internal_representation.rst | 183 +++
doc/sphinx/source/user/introduction.rst | 37 +
doc/sphinx/source/user/user_manual.rst | 17 +
scripts/fixdates | 10 -
scripts/form2ufl | 116 --
scripts/makedoc | 56 -
scripts/ufl2py | 2 +-
setup.py | 32 +-
test/conftest.py | 7 +-
test/mockobjects.py | 3 +-
test/test_algorithms.py | 11 +-
test/test_analyse_demos.py | 4 +-
test/test_apply_algebra_lowering.py | 91 +
test/test_apply_function_pullbacks.py | 366 +++++
test/test_apply_restrictions.py | 4 +-
test/test_arithmetic.py | 1 +
test/test_automatic_differentiation.py | 7 +-
test/test_book_snippets.py | 14 +-
test/test_change_to_local.py | 11 +-
test/test_change_to_reference_frame.py | 292 ++++
test/test_check_arities.py | 8 +-
test/test_classcoverage.py | 10 +-
test/test_conditionals.py | 5 +-
test/test_degree_estimation.py | 3 +-
test/test_derivative.py | 35 +-
test/test_diff.py | 5 +-
test/test_domains.py | 209 +--
test/test_elements.py | 2 +-
test/test_equals.py | 2 +-
test/test_evaluate.py | 4 +-
test/test_expand_indices.py | 4 +-
test/test_ffcforms.py | 2 +-
test/test_form.py | 40 +-
test/test_future_division.py | 1 +
test/test_grad.py | 14 +-
test/test_illegal.py | 3 +-
test/test_indexing.py | 15 +-
test/test_indices.py | 54 +-
test/test_lhs_rhs.py | 2 +-
test/test_literals.py | 3 +-
test/test_measures.py | 65 +-
test/test_mock_expr.py | 28 +-
test/test_new_ad.py | 5 +-
test/test_pickle.py | 2 +-
test/test_piecewise_checks.py | 100 +-
test/test_reference_shapes.py | 8 +-
test/test_scratch.py | 1 +
test/test_signature.py | 25 +-
test/test_simplify.py | 5 +-
test/test_sobolevspace.py | 5 +-
test/test_split.py | 3 +-
test/test_str.py | 1 +
test/test_tensoralgebra.py | 1 +
test/test_utilities.py | 3 +-
ufl/__init__.py | 61 +-
ufl/algebra.py | 7 +-
ufl/algorithms/__init__.py | 20 +-
ufl/algorithms/ad.py | 52 +-
ufl/algorithms/analysis.py | 30 +-
ufl/algorithms/apply_algebra_lowering.py | 178 ++
ufl/algorithms/apply_derivatives.py | 298 +++-
ufl/algorithms/apply_function_pullbacks.py | 226 +++
ufl/algorithms/apply_geometry_lowering.py | 482 ++++++
ufl/algorithms/apply_integral_scaling.py | 89 +
ufl/algorithms/apply_restrictions.py | 17 +-
ufl/algorithms/argument_dependencies.py | 3 +-
ufl/algorithms/change_to_reference.py | 530 +-----
ufl/algorithms/check_arities.py | 28 +-
...agate_restrictions.py => check_restrictions.py} | 19 +-
ufl/algorithms/checks.py | 32 +-
ufl/algorithms/compute_form_data.py | 296 ++--
ufl/algorithms/domain_analysis.py | 96 +-
ufl/algorithms/elementtransformations.py | 81 +-
ufl/algorithms/estimate_degrees.py | 38 +-
ufl/algorithms/expand_compounds.py | 203 +--
ufl/algorithms/expand_indices.py | 17 +-
ufl/algorithms/formdata.py | 38 +-
ufl/algorithms/formfiles.py | 12 +-
ufl/algorithms/formsplitter.py | 68 +
ufl/algorithms/formtransformations.py | 31 +-
ufl/algorithms/forward_ad.py | 76 +-
ufl/algorithms/map_integrands.py | 3 +-
ufl/algorithms/multifunction.py | 1 +
ufl/algorithms/pdiffs.py | 11 +-
ufl/algorithms/predicates.py | 7 +-
ufl/algorithms/renumbering.py | 18 +-
ufl/algorithms/replace.py | 3 +-
ufl/algorithms/signature.py | 60 +-
ufl/algorithms/transformer.py | 7 +-
ufl/algorithms/traversal.py | 3 +-
ufl/argument.py | 115 +-
ufl/assertions.py | 29 +-
ufl/cell.py | 429 +++--
ufl/checks.py | 35 +-
ufl/classes.py | 76 +-
ufl/coefficient.py | 112 +-
ufl/common.py | 36 -
ufl/compound_expressions.py | 54 +-
ufl/conditional.py | 5 +-
ufl/constantvalue.py | 31 +-
ufl/core/compute_expr_hash.py | 3 +-
ufl/core/expr.py | 170 +-
ufl/core/multiindex.py | 14 +-
ufl/core/operator.py | 25 +-
ufl/core/terminal.py | 25 +-
ufl/core/ufl_id.py | 62 +
ufl/core/ufl_type.py | 53 +-
ufl/corealg/map_dag.py | 96 +-
ufl/corealg/multifunction.py | 19 +-
ufl/corealg/traversal.py | 37 +-
ufl/differentiation.py | 56 +-
ufl/domain.py | 648 ++++----
ufl/equation.py | 17 +-
ufl/exprcontainers.py | 9 +-
ufl/exprequals.py | 3 +-
ufl/exproperators.py | 35 +-
ufl/finiteelement/__init__.py | 25 +-
ufl/finiteelement/brokenelement.py | 24 +-
ufl/finiteelement/elementlist.py | 19 +-
ufl/finiteelement/enrichedelement.py | 41 +-
ufl/finiteelement/facetelement.py | 24 +-
ufl/finiteelement/finiteelement.py | 62 +-
ufl/finiteelement/finiteelementbase.py | 94 +-
ufl/finiteelement/hdivcurl.py | 69 +-
ufl/finiteelement/interiorelement.py | 24 +-
ufl/finiteelement/mixedelement.py | 345 ++--
ufl/finiteelement/outerproductelement.py | 150 +-
ufl/finiteelement/restrictedelement.py | 68 +-
ufl/finiteelement/tensorproductelement.py | 38 +-
ufl/finiteelement/traceelement.py | 26 +-
ufl/form.py | 100 +-
ufl/formatting/graph.py | 7 +-
ufl/formatting/latextools.py | 3 +-
ufl/formatting/printing.py | 5 +-
ufl/formatting/ufl2dot.py | 5 +-
ufl/formatting/ufl2latex.py | 22 +-
ufl/formoperators.py | 38 +-
ufl/functionspace.py | 133 ++
ufl/geometry.py | 102 +-
ufl/index_combination_utils.py | 3 +-
ufl/indexed.py | 15 +-
ufl/indexing.py | 3 +-
ufl/indexsum.py | 9 +-
ufl/integral.py | 33 +-
ufl/log.py | 17 +-
ufl/mathfunctions.py | 5 +-
ufl/measure.py | 102 +-
ufl/objects.py | 10 +-
ufl/operators.py | 50 +-
ufl/permutation.py | 7 +-
ufl/precedence.py | 3 +-
ufl/protocols.py | 20 +-
ufl/referencevalue.py | 9 +-
ufl/restriction.py | 3 +-
ufl/sobolevspace.py | 15 +-
ufl/sorting.py | 10 +-
ufl/split_functions.py | 12 +-
ufl/tensoralgebra.py | 11 +-
ufl/tensors.py | 31 +-
ufl/utils/counted.py | 3 +-
ufl/utils/derivativetuples.py | 3 +-
ufl/utils/dicts.py | 3 +-
ufl/utils/formatting.py | 3 +-
ufl/utils/indexflattening.py | 3 +-
ufl/utils/sequences.py | 3 +-
ufl/utils/sorting.py | 22 +-
ufl/utils/stacks.py | 3 +-
ufl/utils/system.py | 3 +-
ufl/utils/timer.py | 3 +-
ufl/utils/ufltypedicts.py | 3 +-
ufl/variable.py | 17 +-
209 files changed, 9530 insertions(+), 4754 deletions(-)
create mode 100644 .gitignore
copy demo/NavierStokes.ufl => doc/sphinx/generate-apidoc (61%)
mode change 100644 => 100755
delete mode 100644 doc/sphinx/scripts/README_generate_modules.rst
delete mode 100755 doc/sphinx/scripts/generate_index.py
delete mode 100755 doc/sphinx/scripts/generate_modules.py
delete mode 100644 doc/sphinx/source/_themes/fenics/README
delete mode 100644 doc/sphinx/source/_themes/fenics/layout.html
delete mode 100644 doc/sphinx/source/_themes/fenics/static/alert_info_32.png
delete mode 100644 doc/sphinx/source/_themes/fenics/static/alert_warning_32.png
delete mode 100644 doc/sphinx/source/_themes/fenics/static/bg-page.png
delete mode 100644 doc/sphinx/source/_themes/fenics/static/bullet_orange.png
delete mode 100644 doc/sphinx/source/_themes/fenics/static/dolfin.png
delete mode 100644 doc/sphinx/source/_themes/fenics/static/dorsal.png
delete mode 100644 doc/sphinx/source/_themes/fenics/static/fenics.css_t
delete mode 100644 doc/sphinx/source/_themes/fenics/static/unknown.png
delete mode 100644 doc/sphinx/source/_themes/fenics/theme.conf
create mode 100644 doc/sphinx/source/api-doc/modules.rst
create mode 100644 doc/sphinx/source/api-doc/ufl.algorithms.rst
create mode 100644 doc/sphinx/source/api-doc/ufl.core.rst
create mode 100644 doc/sphinx/source/api-doc/ufl.corealg.rst
create mode 100644 doc/sphinx/source/api-doc/ufl.finiteelement.rst
create mode 100644 doc/sphinx/source/api-doc/ufl.formatting.rst
create mode 100644 doc/sphinx/source/api-doc/ufl.rst
create mode 100644 doc/sphinx/source/api-doc/ufl.utils.rst
create mode 100644 doc/sphinx/source/index.rst
create mode 100644 doc/sphinx/source/releases.rst
create mode 100644 doc/sphinx/source/releases/next.rst
create mode 100644 doc/sphinx/source/releases/v1.6.0.rst
create mode 100644 doc/sphinx/source/user/algorithms.rst
create mode 100644 doc/sphinx/source/user/command_line_utils.rst
create mode 100644 doc/sphinx/source/user/examples.rst
create mode 100644 doc/sphinx/source/user/form_language.rst
create mode 100644 doc/sphinx/source/user/internal_representation.rst
create mode 100644 doc/sphinx/source/user/introduction.rst
create mode 100644 doc/sphinx/source/user/user_manual.rst
delete mode 100755 scripts/fixdates
delete mode 100755 scripts/form2ufl
delete mode 100755 scripts/makedoc
create mode 100755 test/test_apply_algebra_lowering.py
create mode 100755 test/test_apply_function_pullbacks.py
mode change 100644 => 100755 test/test_apply_restrictions.py
create mode 100755 test/test_change_to_reference_frame.py
mode change 100644 => 100755 test/test_check_arities.py
mode change 100644 => 100755 test/test_reference_shapes.py
create mode 100644 ufl/algorithms/apply_algebra_lowering.py
create mode 100644 ufl/algorithms/apply_function_pullbacks.py
create mode 100644 ufl/algorithms/apply_geometry_lowering.py
create mode 100644 ufl/algorithms/apply_integral_scaling.py
rename ufl/algorithms/{propagate_restrictions.py => check_restrictions.py} (71%)
create mode 100755 ufl/algorithms/formsplitter.py
delete mode 100644 ufl/common.py
create mode 100644 ufl/core/ufl_id.py
create mode 100644 ufl/functionspace.py
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