[ufl] 02/03: Merge tag 'upstream/2016.1.0'
Johannes Ring
johannr-guest at moszumanska.debian.org
Fri Jun 24 11:55:35 UTC 2016
This is an automated email from the git hooks/post-receive script.
johannr-guest pushed a commit to branch master
in repository ufl.
commit dc232b05aeceeb0b4acc3c697ceaf3b77c6306ff
Merge: a597149 e5f5860
Author: Johannes Ring <johannr at simula.no>
Date: Fri Jun 24 13:49:07 2016 +0200
Merge tag 'upstream/2016.1.0'
Upstream version 2016.1.0
.gitignore | 5 +
ChangeLog | 21 +
README | 37 +-
doc/sphinx/Makefile | 77 +-
doc/sphinx/README | 31 +-
ufl/indexing.py => doc/sphinx/generate-apidoc | 18 +-
doc/sphinx/scripts/README_generate_modules.rst | 29 -
doc/sphinx/scripts/generate_index.py | 97 --
doc/sphinx/scripts/generate_modules.py | 269 ---
doc/sphinx/source/_themes/fenics/README | 2 -
doc/sphinx/source/_themes/fenics/layout.html | 69 -
.../source/_themes/fenics/static/alert_info_32.png | Bin 1168 -> 0 bytes
.../_themes/fenics/static/alert_warning_32.png | Bin 1060 -> 0 bytes
.../source/_themes/fenics/static/bg-page.png | Bin 181 -> 0 bytes
.../source/_themes/fenics/static/bullet_orange.png | Bin 365 -> 0 bytes
doc/sphinx/source/_themes/fenics/static/dolfin.png | Bin 571 -> 0 bytes
doc/sphinx/source/_themes/fenics/static/dorsal.png | Bin 3342 -> 0 bytes
.../source/_themes/fenics/static/fenics.css_t | 388 -----
.../source/_themes/fenics/static/unknown.png | Bin 2802 -> 0 bytes
doc/sphinx/source/_themes/fenics/theme.conf | 12 -
doc/sphinx/source/api-doc/modules.rst | 7 +
doc/sphinx/source/api-doc/ufl.algorithms.rst | 270 +++
doc/sphinx/source/api-doc/ufl.core.rst | 70 +
doc/sphinx/source/api-doc/ufl.corealg.rst | 38 +
doc/sphinx/source/api-doc/ufl.finiteelement.rst | 118 ++
doc/sphinx/source/api-doc/ufl.formatting.rst | 54 +
doc/sphinx/source/api-doc/ufl.rst | 354 ++++
doc/sphinx/source/api-doc/ufl.utils.rst | 102 ++
doc/sphinx/source/conf.py | 162 +-
doc/sphinx/source/index.rst | 110 ++
doc/sphinx/source/releases.rst | 8 +
doc/sphinx/source/releases/next.rst | 11 +
doc/sphinx/source/releases/v1.6.0.rst | 31 +
doc/sphinx/source/user/algorithms.rst | 417 +++++
doc/sphinx/source/user/command_line_utils.rst | 48 +
doc/sphinx/source/user/examples.rst | 545 ++++++
doc/sphinx/source/user/form_language.rst | 1738 ++++++++++++++++++++
doc/sphinx/source/user/internal_representation.rst | 183 +++
doc/sphinx/source/user/introduction.rst | 37 +
doc/sphinx/source/user/user_manual.rst | 17 +
scripts/fixdates | 10 -
scripts/form2ufl | 116 --
scripts/makedoc | 56 -
scripts/ufl2py | 2 +-
setup.py | 32 +-
test/conftest.py | 7 +-
test/mockobjects.py | 3 +-
test/test_algorithms.py | 11 +-
test/test_analyse_demos.py | 4 +-
test/test_apply_algebra_lowering.py | 91 +
test/test_apply_function_pullbacks.py | 366 +++++
test/test_apply_restrictions.py | 4 +-
test/test_arithmetic.py | 1 +
test/test_automatic_differentiation.py | 7 +-
test/test_book_snippets.py | 14 +-
test/test_change_to_local.py | 11 +-
test/test_change_to_reference_frame.py | 292 ++++
test/test_check_arities.py | 8 +-
test/test_classcoverage.py | 10 +-
test/test_conditionals.py | 5 +-
test/test_degree_estimation.py | 3 +-
test/test_derivative.py | 35 +-
test/test_diff.py | 5 +-
test/test_domains.py | 209 +--
test/test_elements.py | 2 +-
test/test_equals.py | 2 +-
test/test_evaluate.py | 4 +-
test/test_expand_indices.py | 4 +-
test/test_ffcforms.py | 2 +-
test/test_form.py | 40 +-
test/test_future_division.py | 1 +
test/test_grad.py | 14 +-
test/test_illegal.py | 3 +-
test/test_indexing.py | 15 +-
test/test_indices.py | 54 +-
test/test_lhs_rhs.py | 2 +-
test/test_literals.py | 3 +-
test/test_measures.py | 65 +-
test/test_mock_expr.py | 28 +-
test/test_new_ad.py | 5 +-
test/test_pickle.py | 2 +-
test/test_piecewise_checks.py | 100 +-
test/test_reference_shapes.py | 8 +-
test/test_scratch.py | 1 +
test/test_signature.py | 25 +-
test/test_simplify.py | 5 +-
test/test_sobolevspace.py | 5 +-
test/test_split.py | 3 +-
test/test_str.py | 1 +
test/test_tensoralgebra.py | 1 +
test/test_utilities.py | 3 +-
ufl/__init__.py | 61 +-
ufl/algebra.py | 7 +-
ufl/algorithms/__init__.py | 20 +-
ufl/algorithms/ad.py | 52 +-
ufl/algorithms/analysis.py | 30 +-
ufl/algorithms/apply_algebra_lowering.py | 178 ++
ufl/algorithms/apply_derivatives.py | 298 +++-
ufl/algorithms/apply_function_pullbacks.py | 226 +++
ufl/algorithms/apply_geometry_lowering.py | 482 ++++++
ufl/algorithms/apply_integral_scaling.py | 89 +
ufl/algorithms/apply_restrictions.py | 17 +-
ufl/algorithms/argument_dependencies.py | 3 +-
ufl/algorithms/change_to_reference.py | 530 +-----
ufl/algorithms/check_arities.py | 28 +-
...agate_restrictions.py => check_restrictions.py} | 19 +-
ufl/algorithms/checks.py | 32 +-
ufl/algorithms/compute_form_data.py | 296 ++--
ufl/algorithms/domain_analysis.py | 96 +-
ufl/algorithms/elementtransformations.py | 81 +-
ufl/algorithms/estimate_degrees.py | 38 +-
ufl/algorithms/expand_compounds.py | 203 +--
ufl/algorithms/expand_indices.py | 17 +-
ufl/algorithms/formdata.py | 38 +-
ufl/algorithms/formfiles.py | 12 +-
ufl/algorithms/formsplitter.py | 68 +
ufl/algorithms/formtransformations.py | 31 +-
ufl/algorithms/forward_ad.py | 76 +-
ufl/algorithms/map_integrands.py | 3 +-
ufl/algorithms/multifunction.py | 1 +
ufl/algorithms/pdiffs.py | 11 +-
ufl/algorithms/predicates.py | 7 +-
ufl/algorithms/renumbering.py | 18 +-
ufl/algorithms/replace.py | 3 +-
ufl/algorithms/signature.py | 60 +-
ufl/algorithms/transformer.py | 7 +-
ufl/algorithms/traversal.py | 3 +-
ufl/argument.py | 115 +-
ufl/assertions.py | 29 +-
ufl/cell.py | 429 +++--
ufl/checks.py | 35 +-
ufl/classes.py | 76 +-
ufl/coefficient.py | 112 +-
ufl/common.py | 36 -
ufl/compound_expressions.py | 54 +-
ufl/conditional.py | 5 +-
ufl/constantvalue.py | 31 +-
ufl/core/compute_expr_hash.py | 3 +-
ufl/core/expr.py | 170 +-
ufl/core/multiindex.py | 14 +-
ufl/core/operator.py | 25 +-
ufl/core/terminal.py | 25 +-
ufl/core/ufl_id.py | 62 +
ufl/core/ufl_type.py | 53 +-
ufl/corealg/map_dag.py | 96 +-
ufl/corealg/multifunction.py | 19 +-
ufl/corealg/traversal.py | 37 +-
ufl/differentiation.py | 56 +-
ufl/domain.py | 648 ++++----
ufl/equation.py | 17 +-
ufl/exprcontainers.py | 9 +-
ufl/exprequals.py | 3 +-
ufl/exproperators.py | 35 +-
ufl/finiteelement/__init__.py | 25 +-
ufl/finiteelement/brokenelement.py | 24 +-
ufl/finiteelement/elementlist.py | 19 +-
ufl/finiteelement/enrichedelement.py | 41 +-
ufl/finiteelement/facetelement.py | 24 +-
ufl/finiteelement/finiteelement.py | 62 +-
ufl/finiteelement/finiteelementbase.py | 94 +-
ufl/finiteelement/hdivcurl.py | 69 +-
ufl/finiteelement/interiorelement.py | 24 +-
ufl/finiteelement/mixedelement.py | 345 ++--
ufl/finiteelement/outerproductelement.py | 150 +-
ufl/finiteelement/restrictedelement.py | 68 +-
ufl/finiteelement/tensorproductelement.py | 38 +-
ufl/finiteelement/traceelement.py | 26 +-
ufl/form.py | 100 +-
ufl/formatting/graph.py | 7 +-
ufl/formatting/latextools.py | 3 +-
ufl/formatting/printing.py | 5 +-
ufl/formatting/ufl2dot.py | 5 +-
ufl/formatting/ufl2latex.py | 22 +-
ufl/formoperators.py | 38 +-
ufl/functionspace.py | 133 ++
ufl/geometry.py | 102 +-
ufl/index_combination_utils.py | 3 +-
ufl/indexed.py | 15 +-
ufl/indexing.py | 3 +-
ufl/indexsum.py | 9 +-
ufl/integral.py | 33 +-
ufl/log.py | 17 +-
ufl/mathfunctions.py | 5 +-
ufl/measure.py | 102 +-
ufl/objects.py | 10 +-
ufl/operators.py | 50 +-
ufl/permutation.py | 7 +-
ufl/precedence.py | 3 +-
ufl/protocols.py | 20 +-
ufl/referencevalue.py | 9 +-
ufl/restriction.py | 3 +-
ufl/sobolevspace.py | 15 +-
ufl/sorting.py | 10 +-
ufl/split_functions.py | 12 +-
ufl/tensoralgebra.py | 11 +-
ufl/tensors.py | 31 +-
ufl/utils/counted.py | 3 +-
ufl/utils/derivativetuples.py | 3 +-
ufl/utils/dicts.py | 3 +-
ufl/utils/formatting.py | 3 +-
ufl/utils/indexflattening.py | 3 +-
ufl/utils/sequences.py | 3 +-
ufl/utils/sorting.py | 22 +-
ufl/utils/stacks.py | 3 +-
ufl/utils/system.py | 3 +-
ufl/utils/timer.py | 3 +-
ufl/utils/ufltypedicts.py | 3 +-
ufl/variable.py | 17 +-
208 files changed, 9527 insertions(+), 4744 deletions(-)
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