[code-saturne] 01/02: Merge tag 'upstream/4.3.0+repack'

Gilles Filippini pini at debian.org
Mon Oct 3 21:03:41 UTC 2016


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pini pushed a commit to branch master
in repository code-saturne.

commit 07fc6410786aaa466591f6640660d510b66a926f
Merge: 73e7d3b 1231e17
Author: Gilles Filippini <pini at debian.org>
Date:   Thu Sep 22 20:45:50 2016 +0200

    Merge tag 'upstream/4.3.0+repack'
    
    Upstream version 4.3.0+repack

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 src/base/field_operator.f90                        |   25 +-
 src/base/fldini.f90                                |  256 +-
 src/base/fldprp.f90                                |  195 +-
 src/base/fldtri.f90                                |    2 -
 src/base/fldvar.f90                                |  312 +-
 src/base/impini.f90                                |  450 +-
 src/base/iniini.f90                                |   57 +-
 src/base/initi1.f90                                |   24 +-
 src/base/iniusi.f90                                |   36 +-
 src/base/iniva0.f90                                |   32 +-
 src/base/inivar.f90                                |  122 +-
 src/base/lecamx.f90                                |   24 +-
 src/base/mesh.f90                                  |    3 +-
 src/base/modini.f90                                |   10 +-
 src/base/navstv.f90                                |    8 +-
 src/base/numvar.f90                                |   10 +-
 src/base/optcal.f90                                |  100 +-
 src/base/paramx.f90                                |   20 +-
 src/base/phyvar.f90                                |   39 +-
 src/base/pointe.f90                                |   71 +-
 src/base/precli.f90                                |   28 +-
 src/base/predfl.f90                                |    2 -
 src/base/predvv.f90                                |   53 +-
 src/base/prehyd.f90                                |   25 +-
 src/base/pthrbm.f90                                |   50 +-
 src/base/ptrglo.f90                                |    2 +-
 src/base/resopv.f90                                |   28 +-
 src/base/resvoi.f90                                |    4 +-
 src/base/rotation.f90                              |   57 +-
 src/base/scalai.f90                                |   38 +-
 src/base/strdep.f90                                |    4 +-
 src/base/strhis.f90                                |    2 +-
 src/base/strini.f90                                |    8 +-
 src/base/tridim.f90                                |   74 +-
 src/base/turbomachinery.f90                        |   17 +-
 src/base/typecl.f90                                |  139 +-
 src/base/varpos.f90                                |   88 +-
 src/base/vericl.f90                                |    2 +-
 src/base/verini.f90                                |   71 +-
 src/base/zufall.f90                                |  161 +-
 src/bft/bft_backtrace.c                            |    4 +
 src/bft/bft_mem_usage.c                            |    2 +
 src/cdo/Makefile.am                                |   23 +-
 src/cdo/cs_advection_field.c                       |  997 +++-
 src/cdo/cs_advection_field.h                       |  194 +-
 src/cdo/cs_cdo.c                                   |   74 +-
 src/cdo/cs_cdo.h                                   |  170 +-
 src/cdo/cs_cdo_advection.c                         | 1644 +++++
 src/cdo/cs_cdo_advection.h                         |  211 +
 src/cdo/cs_cdo_bc.c                                |   15 +-
 src/cdo/cs_cdo_connect.c                           |  164 +-
 src/cdo/cs_cdo_connect.h                           |   26 +-
 src/cdo/cs_cdo_diffusion.c                         | 1407 +++++
 src/cdo/cs_cdo_diffusion.h                         |  231 +
 src/cdo/cs_cdo_local.c                             |  909 +++
 src/cdo/cs_cdo_local.h                             |  346 ++
 src/cdo/cs_cdo_main.c                              |  129 +-
 src/cdo/cs_cdo_quantities.c                        |  533 +-
 src/cdo/cs_cdo_quantities.h                        |   84 +-
 src/cdo/cs_cdo_scheme_geometry.c                   |  371 ++
 src/cdo/cs_cdo_scheme_geometry.h                   |  275 +
 src/cdo/cs_cdo_toolbox.c                           |  823 +--
 src/cdo/cs_cdo_toolbox.h                           |  357 +-
 src/cdo/cs_cdofb_scaleq.c                          |  265 +-
 src/cdo/cs_cdofb_scaleq.h                          |   77 +-
 src/cdo/cs_cdovb_advection.c                       |  766 ---
 src/cdo/cs_cdovb_advection.h                       |  181 -
 src/cdo/cs_cdovb_diffusion.c                       |  928 ---
 src/cdo/cs_cdovb_diffusion.h                       |  148 -
 src/cdo/cs_cdovb_scaleq.c                          | 2074 ++++---
 src/cdo/cs_cdovb_scaleq.h                          |  101 +-
 src/cdo/cs_cdovcb_scaleq.c                         | 1802 ++++++
 src/cdo/cs_cdovcb_scaleq.h                         |  270 +
 src/cdo/cs_domain.c                                | 1443 +++--
 src/cdo/cs_domain.h                                |  224 +-
 src/cdo/cs_equation.c                              | 3027 ++++------
 src/cdo/cs_equation.h                              |  355 +-
 src/cdo/cs_equation_common.c                       |  211 +
 src/cdo/cs_equation_common.h                       |  122 +
 src/cdo/cs_equation_param.c                        |  864 +++
 src/cdo/cs_equation_param.h                        |  217 +
 src/cdo/cs_equation_priv.h                         |  156 -
 src/cdo/cs_evaluate.c                              | 1110 ++--
 src/cdo/cs_evaluate.h                              |  123 +-
 src/cdo/cs_groundwater.c                           | 2017 +++++--
 src/cdo/cs_groundwater.h                           |  271 +-
 src/cdo/cs_hodge.c                                 | 1573 +++--
 src/cdo/cs_hodge.h                                 |   71 +-
 src/cdo/cs_param.c                                 |  255 +-
 src/cdo/cs_param.h                                 |  285 +-
 src/cdo/cs_property.c                              | 1277 ++--
 src/cdo/cs_property.h                              |  229 +-
 src/cdo/cs_quadrature.c                            |    2 +-
 src/cdo/cs_reco.c                                  |  206 +-
 src/cdo/cs_reco.h                                  |   99 +-
 src/cdo/cs_sla.c                                   | 3951 ++++++++++++
 src/cdo/cs_sla.h                                   |  135 +-
 src/cdo/cs_sla_matrix.c                            | 3663 ------------
 src/cdo/cs_source_term.c                           |  511 ++
 src/cdo/cs_source_term.h                           |  253 +
 src/cdo/cs_walldistance.c                          |  194 +-
 src/cdo/cs_walldistance.h                          |   36 +-
 src/cfbl/cfener.f90                                |    4 +-
 src/cfbl/cfiniv.f90                                |    2 +-
 src/cfbl/cfmsfp.f90                                |   13 +-
 src/cfbl/cfmspr.f90                                |    2 +-
 src/cfbl/cfxtcl.f90                                |    1 -
 src/cfbl/cs_cf_thermo.c                            |   22 +-
 src/cogz/Makefile.am                               |    1 +
 src/cogz/coincl.f90                                |   63 +-
 src/cogz/coini1.f90                                |    3 +-
 src/cogz/colecd.f90                                |  409 +-
 src/cogz/d3pini.f90                                |    8 +-
 src/cogz/d3pint.f90                                |  165 +-
 src/cogz/d3pphy.f90                                |   55 +-
 src/cogz/d3ptcl.f90                                |    4 +-
 src/cogz/ebuini.f90                                |    3 +-
 src/cogz/ebuphy.f90                                |   83 +-
 src/cogz/gauss.f90                                 |  183 +
 src/cogz/lwcini.f90                                |    3 +-
 src/cogz/lwcphy.f90                                |   28 +-
 src/cogz/lwctss.f90                                |   42 +-
 src/cogz/pdflwc.f90                                |  283 +-
 src/cogz/pdfpp3.f90                                |  118 +-
 src/cogz/pdfpp4.f90                                |  142 +-
 src/cogz/sootsc.f90                                |   23 +-
 src/comb/cpincl.f90                                |   97 +-
 src/comb/cplph1.f90                                |   78 +-
 src/comb/cplphy.f90                                |    8 +-
 src/comb/cpltss.f90                                |    1 -
 src/comb/cs_coal_fp2st.f90                         |   32 +-
 src/comb/cs_coal_masstransfer.f90                  |  218 +-
 src/comb/cs_coal_noxst.f90                         |  114 +-
 src/comb/cs_coal_physprop.f90                      |   42 +-
 src/comb/cs_coal_physprop1.f90                     |  218 +-
 src/comb/cs_coal_physprop2.f90                     |   56 +-
 src/comb/cs_coal_prop.f90                          |   21 +-
 src/comb/cs_coal_radst.f90                         |   25 +-
 src/comb/cs_coal_readata.f90                       |    5 +-
 src/comb/cs_coal_scast.f90                         |  663 +-
 src/comb/cs_coal_thfieldconv2.f90                  |   25 +-
 src/comb/cs_coal_varini.f90                        |    2 +-
 src/comb/cs_fuel_bcond.f90                         |    3 -
 src/comb/cs_fuel_fp2st.f90                         |   20 +-
 src/comb/cs_fuel_incl.f90                          |   55 +-
 src/comb/cs_fuel_masstransfer.f90                  |   83 +-
 src/comb/cs_fuel_noxst.f90                         |   77 +-
 src/comb/cs_fuel_physprop.f90                      |   40 +-
 src/comb/cs_fuel_physprop1.f90                     |  166 +-
 src/comb/cs_fuel_physprop2.f90                     |   30 +-
 src/comb/cs_fuel_prop.f90                          |   19 +-
 src/comb/cs_fuel_radst.f90                         |   23 +-
 src/comb/cs_fuel_readata.f90                       |    5 +-
 src/comb/cs_fuel_scast.f90                         |  164 +-
 src/comb/cs_fuel_thfieldconv2.f90                  |   24 +-
 src/comb/cs_fuel_varini.f90                        |    2 +-
 src/ctwr/cs_ctwr.c                                 |   20 +-
 src/ctwr/cs_ctwr_mesh.c                            |   64 +-
 src/ctwr/ctiniv.f90                                |    2 +-
 src/ctwr/ctphyv.f90                                |    3 -
 src/darc/daini1.f90                                |   20 +-
 src/darc/darcy_module.f90                          |   28 +-
 src/darc/richards.f90                              |   24 +-
 src/elec/Makefile.am                               |   30 +-
 src/elec/cs_elec_bcond.f90                         |  115 -
 src/elec/cs_elec_model.c                           | 2383 ++++++++
 src/elec/cs_elec_model.h                           |  311 +
 src/elec/elflux.f90                                |  688 ---
 src/elec/elincl.f90                                |  181 -
 src/elec/elini1.f90                                |  272 -
 src/elec/eliniv.f90                                |  324 -
 src/elec/ellecd.f90                                |  364 --
 src/elec/elphyv.f90                                |  711 ---
 src/elec/elprop.f90                                |  163 -
 src/elec/elreca.f90                                |  371 --
 src/elec/elthht.f90                                |  204 -
 src/elec/eltssc.f90                                |  243 -
 src/elec/elvarp.f90                                |  223 -
 src/elec/elveri.f90                                |  580 --
 src/fvm/Makefile.am                                |    4 +
 src/fvm/fvm_box_tree.c                             |    7 +-
 src/fvm/fvm_hilbert.c                              |  422 +-
 src/fvm/fvm_morton.c                               |    6 +-
 src/fvm/fvm_neighborhood.c                         |    7 +-
 src/fvm/fvm_nodal.c                                |  119 +-
 src/fvm/fvm_nodal.h                                |   47 +-
 src/fvm/fvm_nodal_extrude.c                        |    2 +-
 src/fvm/fvm_nodal_extrude.h                        |    2 +-
 src/fvm/fvm_nodal_priv.h                           |   11 +
 src/fvm/fvm_point_location.c                       |  200 +-
 src/fvm/fvm_point_location.h                       |   33 +
 src/fvm/fvm_selector_postfix.c                     |    2 +-
 src/fvm/fvm_to_catalyst.cxx                        |    7 +
 src/fvm/fvm_to_ccm.c                               |   32 +-
 src/fvm/fvm_to_ccm.h                               |   18 -
 src/fvm/fvm_to_cgns.c                              |    9 +-
 src/fvm/fvm_to_cgns.h                              |    2 +-
 src/fvm/fvm_to_ensight.c                           |   10 +-
 src/fvm/fvm_to_ensight.h                           |    2 +-
 src/fvm/fvm_to_med.c                               |  717 ++-
 src/fvm/fvm_to_med.h                               |   19 +-
 src/fvm/fvm_to_medcoupling.cxx                     | 1086 +---
 src/fvm/fvm_to_medcoupling.h                       |   14 +-
 src/fvm/fvm_to_plot.c                              |  667 +++
 src/fvm/fvm_to_plot.h                              |  187 +
 src/fvm/fvm_to_time_plot.c                         |  721 +++
 src/fvm/fvm_to_time_plot.h                         |  179 +
 src/fvm/fvm_writer.c                               |  327 +-
 src/fvm/fvm_writer.h                               |    2 +-
 src/fvm/fvm_writer_helper.c                        |   85 +-
 src/fvm/fvm_writer_helper.h                        |   18 +
 src/fvm/fvm_writer_priv.h                          |   35 +-
 src/gui/Makefile.am                                |   13 +
 src/gui/cs_gui.c                                   |  427 +-
 src/gui/cs_gui.h                                   |   23 +-
 src/gui/cs_gui_boundary_conditions.c               |  428 +-
 src/gui/cs_gui_boundary_conditions.h               |    9 +-
 src/gui/cs_gui_conjugate_heat_transfer.c           |   16 +-
 src/gui/cs_gui_conjugate_heat_transfer.h           |   11 +-
 src/gui/cs_gui_mesh.c                              |  127 +
 src/gui/cs_gui_mesh.h                              |   14 +
 src/gui/cs_gui_mobile_mesh.c                       |   38 +-
 src/gui/cs_gui_output.c                            |   51 +-
 src/gui/cs_gui_output.h                            |    1 -
 src/gui/cs_gui_particles.c                         | 1545 ++---
 src/gui/cs_gui_particles.h                         |  191 +-
 src/gui/cs_gui_radiative_transfer.c                |  410 +-
 src/gui/cs_gui_radiative_transfer.h                |   80 +-
 src/gui/cs_gui_specific_physics.c                  |  983 ++-
 src/gui/cs_gui_specific_physics.h                  |  144 +-
 src/lagr/Makefile.am                               |  129 +-
 src/lagr/cs_lagr.c                                 | 2463 ++++++++
 src/lagr/cs_lagr.h                                 | 1548 +++++
 src/lagr/cs_lagr_adh.c                             |  635 ++
 src/lagr/cs_lagr_adh.h                             |   71 +
 src/lagr/cs_lagr_car.c                             |  584 ++
 src/lagr/cs_lagr_car.h                             |   89 +
 src/lagr/cs_lagr_clogging.c                        |   97 +-
 src/lagr/cs_lagr_clogging.h                        |   46 +-
 src/lagr/cs_lagr_coupling.c                        |  505 ++
 src/lagr/cs_lagr_coupling.h                        |   98 +
 src/lagr/cs_lagr_deposition_model.c                | 1224 ++++
 src/lagr/cs_lagr_deposition_model.h                |  192 +
 src/lagr/cs_lagr_dlvo.c                            |  130 +-
 src/lagr/cs_lagr_dlvo.h                            |   42 +-
 src/lagr/cs_lagr_extract.c                         |    4 +-
 src/lagr/cs_lagr_extract.h                         |    4 +-
 src/lagr/cs_lagr_geom.c                            |  178 +
 src/lagr/cs_lagr_geom.h                            |   65 +
 src/lagr/cs_lagr_gradients.c                       |  187 +
 src/lagr/cs_lagr_gradients.h                       |   74 +
 src/lagr/cs_lagr_head_losses.c                     |  478 ++
 src/lagr/cs_lagr_head_losses.h                     |   68 +
 src/lagr/cs_lagr_injection.c                       | 1803 ++++++
 src/lagr/cs_lagr_injection.h                       |   64 +
 src/lagr/cs_lagr_lec.c                             | 2636 ++++++++
 src/lagr/cs_lagr_lec.h                             |  126 +
 src/lagr/cs_lagr_log.c                             |  747 +++
 src/lagr/cs_lagr_log.h                             |   70 +
 src/lagr/cs_lagr_new.c                             |  699 +++
 src/lagr/cs_lagr_new.h                             |   96 +
 src/lagr/cs_lagr_options.c                         | 3880 ++++++++++++
 src/lagr/cs_lagr_options.h                         |  117 +
 src/lagr/cs_lagr_particle.c                        | 1151 ++++
 src/lagr/cs_lagr_particle.h                        | 1344 +++++
 src/lagr/cs_lagr_perio.c                           |  251 -
 src/lagr/cs_lagr_perio.h                           |  108 -
 src/lagr/cs_lagr_poisson.c                         |  510 ++
 src/lagr/cs_lagr_poisson.h                         |   68 +
 src/lagr/cs_lagr_post.c                            |  440 ++
 src/lagr/cs_lagr_post.h                            |  147 +
 src/lagr/cs_lagr_precipitation_model.c             |  466 ++
 src/lagr/cs_lagr_precipitation_model.h             |   54 +
 src/lagr/cs_lagr_print.c                           |  236 +
 src/lagr/cs_lagr_print.h                           |   79 +
 src/lagr/cs_lagr_prototypes.h                      |  288 +
 src/lagr/cs_lagr_query.c                           |  116 +
 src/lagr/cs_lagr_query.h                           |   76 +
 src/lagr/cs_lagr_restart.c                         |   20 +-
 src/lagr/cs_lagr_resuspension.c                    |  382 ++
 src/lagr/cs_lagr_resuspension.h                    |   65 +
 src/lagr/cs_lagr_roughness.c                       |  201 +-
 src/lagr/cs_lagr_roughness.h                       |   46 +-
 src/lagr/cs_lagr_sde.c                             | 2000 +++++++
 src/lagr/cs_lagr_sde.h                             |   99 +
 src/lagr/cs_lagr_sde_model.c                       | 1758 ++++++
 src/lagr/cs_lagr_sde_model.h                       |   90 +
 src/lagr/cs_lagr_stat.c                            | 3446 +++++++++++
 src/lagr/cs_lagr_stat.h                            |  515 ++
 src/lagr/cs_lagr_tracking.c                        | 3182 +++-------
 src/lagr/cs_lagr_tracking.h                        | 1294 +---
 src/lagr/cs_lagr_utils.c                           |  177 -
 src/lagr/cs_lagr_utils.h                           |   84 -
 src/lagr/diverv.f90                                |  138 -
 src/lagr/lagadh.f90                                |  514 --
 src/lagr/lagaff.f90                                |  324 -
 src/lagr/lagcar.f90                                |  638 --
 src/lagr/lagcli.f90                                |  242 -
 src/lagr/lagcou.f90                                |  477 --
 src/lagr/lagdcl.f90                                |  450 --
 src/lagr/lagdep.f90                                |  417 --
 src/lagr/lagdif.f90                                |  323 -
 src/lagr/lagdim.f90                                |   58 -
 src/lagr/lageje.f90                                |  136 -
 src/lagr/lagent.f90                                | 2494 --------
 src/lagr/lageqp.f90                                |  350 --
 src/lagr/lages1.f90                                |  411 --
 src/lagr/lages2.f90                                |  441 --
 src/lagr/lagesd.f90                                |  720 ---
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 src/lagr/lagidp.f90                                |   97 -
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 src/lagr/lagipn.f90                                |  349 --
 src/lagr/lagitf.f90                                |  301 -
 src/lagr/lagitg.f90                                |  211 -
 src/lagr/lagitp.f90                                |  157 -
 src/lagr/laglec.f90                                | 1961 ------
 src/lagr/laglis.f90                                |  528 --
 src/lagr/lagnew.f90                                |  379 --
 src/lagr/lagopt.f90                                | 4042 -------------
 src/lagr/lagout.f90                                |  495 --
 src/lagr/lagpar.f90                                |  188 -
 src/lagr/lagphy.f90                                |  191 -
 src/lagr/lagpoi.f90                                |  202 -
 src/lagr/lagprj.f90                                |  142 -
 src/lagr/lagran.f90                                | 1876 +-----
 src/lagr/lagres.f90                                |  320 -
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 src/lagr/lagsec.f90                                |  319 -
 src/lagr/lagsta.f90                                |  568 --
 src/lagr/lagstf.f90                                |  156 -
 src/lagr/lagswe.f90                                |  194 -
 src/lagr/lagtmp.f90                                |  326 -
 src/lagr/lagune.f90                                |  944 ---
 src/lagr/porcel.f90                                |  324 -
 src/lagr/precdi.f90                                |  259 -
 src/lagr/precst.f90                                |  191 -
 src/mesh/Makefile.am                               |    4 +
 src/mesh/cs_join.c                                 |    2 +-
 src/mesh/cs_join_intersect.c                       |   74 +-
 src/mesh/cs_join_intersect.h                       |    4 +-
 src/mesh/cs_join_merge.c                           |    6 +-
 src/mesh/cs_join_mesh.c                            |   11 +-
 src/mesh/cs_join_set.c                             |    3 +
 src/mesh/cs_join_update.c                          |    3 +-
 src/mesh/cs_join_util.c                            |    4 +-
 src/mesh/cs_join_util.h                            |    4 +-
 src/mesh/cs_mesh.c                                 |   40 +-
 src/mesh/cs_mesh.h                                 |    2 +
 src/mesh/cs_mesh_adjacencies.c                     |  349 ++
 src/mesh/cs_mesh_adjacencies.h                     |  126 +
 src/mesh/cs_mesh_extrude.c                         | 1803 ++++++
 src/mesh/cs_mesh_extrude.h                         |  121 +
 src/mesh/cs_mesh_from_builder.c                    |    3 +
 src/mesh/cs_mesh_location.c                        |   20 -
 src/mesh/cs_mesh_quantities.c                      |  189 +-
 src/mesh/cs_mesh_quantities.h                      |   27 +
 src/mesh/cs_partition.c                            |   17 +-
 src/pprt/Makefile.am                               |   34 +-
 src/pprt/cs_combustion_model.c                     |  290 +
 src/pprt/cs_combustion_model.h                     |  172 +
 src/pprt/cs_physical_model.c                       |  137 +
 src/pprt/cs_physical_model.h                       |   97 +
 src/pprt/ppcabs.f90                                |  473 --
 src/pprt/ppcpfu.f90                                |    4 +-
 src/pprt/ppincl.f90                                |  185 +-
 src/pprt/ppini1.f90                                |   16 +-
 src/pprt/ppinii.f90                                |   65 +-
 src/pprt/ppiniv.f90                                |   20 +-
 src/pprt/pplecd.f90                                |   12 +-
 src/pprt/pppdfr.f90                                |    2 +-
 src/pprt/ppphyv.f90                                |   57 +-
 src/pprt/ppprcl.f90                                |    3 +-
 src/pprt/ppprop.f90                                |   12 +-
 src/pprt/pptbht.f90                                |   10 +-
 src/pprt/ppthch.f90                                |  100 +-
 src/pprt/pptssc.f90                                |   57 +-
 src/pprt/pptycl.f90                                |    6 +-
 src/pprt/ppvarp.f90                                |   15 +-
 src/rayt/Makefile.am                               |   59 +-
 src/rayt/cs_rad_transfer.c                         |  173 +
 src/rayt/cs_rad_transfer.h                         |  202 +
 src/rayt/cs_rad_transfer_absorption.c              |  488 ++
 src/rayt/cs_rad_transfer_absorption.h              |   92 +
 src/rayt/cs_rad_transfer_adf_models.c              |  681 +++
 src/rayt/cs_rad_transfer_adf_models.h              |  106 +
 src/rayt/cs_rad_transfer_bcs.c                     | 1455 +++++
 src/rayt/cs_rad_transfer_bcs.h                     |  164 +
 src/rayt/cs_rad_transfer_dir.c                     |  769 +++
 src/rayt/cs_rad_transfer_dir.h                     |   67 +
 src/rayt/cs_rad_transfer_fsck.c                    | 1339 +++++
 src/rayt/cs_rad_transfer_fsck.h                    |   84 +
 src/rayt/cs_rad_transfer_modak.c                   |  671 +++
 src/rayt/cs_rad_transfer_modak.h                   |   83 +
 src/rayt/cs_rad_transfer_options.c                 |  366 ++
 src/rayt/cs_rad_transfer_options.h                 |   85 +
 src/rayt/cs_rad_transfer_property_fields.c         |  354 ++
 src/rayt/cs_rad_transfer_property_fields.h         |   71 +
 src/rayt/cs_rad_transfer_pun.c                     |  371 ++
 src/rayt/cs_rad_transfer_pun.h                     |  107 +
 src/rayt/cs_rad_transfer_restart.c                 |  363 ++
 src/rayt/cs_rad_transfer_restart.h                 |   76 +
 src/rayt/cs_rad_transfer_solve.c                   | 1960 ++++++
 src/rayt/cs_rad_transfer_solve.h                   |   91 +
 src/rayt/cs_rad_transfer_source_terms.c            |  131 +
 src/rayt/cs_rad_transfer_source_terms.h            |   75 +
 src/rayt/cs_rad_transfer_wall_flux.c               |  703 +++
 src/rayt/cs_rad_transfer_wall_flux.h               |  114 +
 src/rayt/cs_radiation_solver.c                     |  276 -
 src/rayt/cs_radiation_solver.h                     |   77 -
 src/rayt/radf08.f90                                |  264 -
 src/rayt/radf50.f90                                |  256 -
 src/rayt/radiat.f90                                |  306 +-
 src/rayt/rafsck.f90                                | 1033 ----
 src/rayt/raycli.f90                                | 1557 -----
 src/rayt/raycll.f90                                |  387 --
 src/rayt/raydak.f90                                |  167 -
 src/rayt/raydir.f90                                |  694 ---
 src/rayt/raydom.f90                                | 1311 ----
 src/rayt/raylec.f90                                |  274 -
 src/rayt/rayopt.f90                                |  624 --
 src/rayt/rayout.f90                                |  181 -
 src/rayt/raypar.f90                                |  860 ---
 src/rayt/rayprp.f90                                |  248 -
 src/rayt/raypun.f90                                |  368 --
 src/rayt/raysca.f90                                |  119 -
 src/rayt/raysol.f90                                |  438 --
 src/rayt/rmodak.f90                                |  910 ---
 src/turb/clprij.f90                                |    1 +
 src/turb/cs_les_filter.c                           |   28 -
 src/turb/cs_les_filter.h                           |   25 -
 src/turb/cs_les_inflow.c                           |    8 +-
 src/turb/cs_turbulence_model.c                     |    4 +-
 src/turb/cs_turbulence_model.h                     |    2 +-
 src/turb/divrit.f90                                |  191 +-
 src/turb/resalp.f90                                |    3 +-
 src/turb/reseps.f90                                |    9 +-
 src/turb/resrij.f90                                |   13 +-
 src/turb/resrij2.f90                               |   13 +-
 src/turb/resrit.f90                                |    1 +
 src/turb/resssg.f90                                |    7 +-
 src/turb/resssg2.f90                               |    9 +-
 src/turb/resv2f.f90                                |   11 +-
 src/turb/rijthe2.f90                               |    5 +-
 src/turb/turbke.f90                                |   25 +-
 src/turb/turbkw.f90                                |   22 +-
 src/turb/turbsa.f90                                |    7 +-
 src/turb/turrij.f90                                |    4 +-
 src/turb/vissst.f90                                |    2 +-
 src/user/Makefile.am                               |   68 +-
 src/user/cs_user_atmospheric_model.f90             |  272 +-
 src/user/cs_user_boundary_conditions.c             |  116 +
 src/user/cs_user_boundary_conditions.f90           |   16 +-
 src/user/cs_user_boundary_conditions_ale.f90       |   12 +-
 src/user/cs_user_boundary_mass_source_terms.f90    |    9 +-
 src/user/cs_user_cdo.c                             |   17 +-
 src/user/cs_user_cdo_extra_op.c                    |   48 +-
 src/user/cs_user_cdo_numerics.c                    |   22 +-
 src/user/cs_user_coupling.c                        |  195 +-
 src/user/cs_user_electric_scaling.c                |   94 +
 src/user/cs_user_extra_operations.c                |   13 +-
 src/user/cs_user_extra_operations.f90              |   24 +-
 src/user/cs_user_fluid_structure_interaction.f90   |  550 +-
 src/user/cs_user_head_losses.f90                   |   10 +-
 src/user/cs_user_initialization.c                  |  123 +
 src/user/cs_user_initialization.f90                |   32 +-
 src/user/cs_user_lagr_bcs.c                        |  442 ++
 src/user/cs_user_lagr_model.c                      |  651 ++
 src/user/cs_user_lagr_particle.c                   |  388 ++
 src/user/cs_user_les_inflow.f90                    |   46 +-
 src/user/cs_user_mass_source_terms.f90             |   37 +-
 src/user/cs_user_mesh.c                            |  649 +-
 src/user/cs_user_modules.f90                       |   99 +-
 src/user/cs_user_parameters.c                      |   15 +-
 src/user/cs_user_parameters.f90                    | 2246 +------
 src/user/cs_user_particle_tracking.f90             | 1778 ------
 src/user/cs_user_performance_tuning.c              |  255 +-
 src/user/cs_user_physical_properties.c             |  115 +
 src/user/cs_user_physical_properties.f90           | 1402 +----
 src/user/cs_user_porosity.f90                      |   22 +-
 src/user/cs_user_postprocess.c                     |  581 +-
 src/user/cs_user_postprocess_var.f90               |  575 +-
 src/user/cs_user_radiative_transfer.c              |  201 +
 src/user/cs_user_radiative_transfer.f90            |  464 --
 src/user/cs_user_radiative_transfer_bcs.c          |  216 +
 src/user/cs_user_radiative_transfer_bcs.f90        |  338 --
 src/user/cs_user_radiative_transfer_param.c        |    0
 src/user/cs_user_solver.c                          |  205 +-
 src/user/cs_user_source_terms.f90                  |  524 +-
 src/user/cs_user_turbomachinery.c                  |   78 +-
 src/user/usatch.f90                                |  116 +-
 src/user/usctdz.f90                                |   71 +-
 src/user/uselrc.f90                                |  452 --
 src/user/ushist.f90                                |  284 +-
 src/user/uslaen.f90                                |  299 -
 src/user/uslag1.f90                                |  875 ---
 src/user/uslag2.f90                                |  530 --
 src/user/uspt1d.f90                                |  264 +-
 src/user/usthht.f90                                |  191 +-
 src/user/usvort.f90                                |  428 +-
 src/user/usvosy.f90                                |  209 +-
 src/user_examples/Makefile.am                      |   44 +-
 src/user_examples/cs_user_atmospheric_model.f90    |  347 ++
 .../cs_user_boundary_conditions-advanced.f90       |    5 +-
 .../cs_user_boundary_conditions-atmospheric.f90    |    5 +-
 ...user_boundary_conditions-auto_inlet_profile.f90 |    5 +-
 .../cs_user_boundary_conditions-base.f90           |    5 +-
 .../cs_user_boundary_conditions-compressible.f90   |    5 +-
 .../cs_user_boundary_conditions-cooling_towers.f90 |    5 +-
 .../cs_user_boundary_conditions-electric_arcs.f90  |  146 +-
 ...undary_conditions-electric_arcs_ieljou_3_or_4.c |  373 ++
 ...dary_conditions-electric_arcs_ieljou_3_or_4.f90 |  461 --
 .../cs_user_boundary_conditions-fuel.f90           |    5 +-
 .../cs_user_boundary_conditions-gas_3ptchem.f90    |    5 +-
 .../cs_user_boundary_conditions-gas_ebu.f90        |    5 +-
 ...user_boundary_conditions-gas_libby_williams.f90 |    5 +-
 .../cs_user_boundary_conditions-mapped_inlet.f90   |   13 +-
 ...cs_user_boundary_conditions-pulverized_coal.f90 |    5 +-
 ...ndary_conditions-pulverized_coal_lagrangian.f90 |    5 +-
 .../cs_user_boundary_conditions-richards.f90       |    5 +-
 .../cs_user_boundary_conditions_ale-base.f90       |   82 +-
 ...ser_boundary_mass_source_terms-condensation.f90 |   89 +-
 ...ndary_mass_source_terms-nzones_condensation.f90 |  113 +-
 src/user_examples/cs_user_cdo-condif.c             |  256 +-
 src/user_examples/cs_user_cdo-groundwater.c        |  314 +-
 .../cs_user_cdo_extra_op-verif-diffusion.c         |  151 +-
 src/user_examples/cs_user_cdo_numerics-examples.c  |  211 +-
 src/user_examples/cs_user_coupling-saturne.c       |  139 +
 src/user_examples/cs_user_coupling-syrthes.c       |  187 +
 src/user_examples/cs_user_coupling.c               |  112 +
 src/user_examples/cs_user_electric_scaling.c       |  312 +
 .../cs_user_extra_operations-energy_balance.f90    |   11 +-
 ...cs_user_extra_operations-extract_1d_profile.f90 |   15 +-
 .../cs_user_extra_operations-force_temperature.f90 |   16 +-
 .../cs_user_extra_operations-global_efforts.f90    |   16 +-
 ...s_user_extra_operations-nusselt_calculation.f90 |    7 +-
 ...s_user_extra_operations-parallel_operations.f90 |   16 +-
 .../cs_user_extra_operations-richards_flux.f90     |   23 +-
 .../cs_user_extra_operations-scalar_balance.c      |   11 +
 ...ser_extra_operations-scalar_balance_by_zone.f90 |   17 +-
 .../cs_user_extra_operations-turbomachinery.c      |  429 ++
 .../cs_user_fluid_structure_interaction.f90        |  500 ++
 src/user_examples/cs_user_head_losses.f90          |   21 +-
 .../cs_user_initialization-atmospheric.f90         |   11 +-
 src/user_examples/cs_user_initialization-base.f90  |   13 +-
 .../cs_user_initialization-compressible.f90        |    8 +-
 .../cs_user_initialization-cooling_towers.f90      |    8 +-
 .../cs_user_initialization-electric_arcs.f90       |  103 +-
 src/user_examples/cs_user_initialization-fuel.f90  |    9 +-
 .../cs_user_initialization-gas_3ptchem.f90         |    9 +-
 .../cs_user_initialization-gas_ebu.f90             |    9 +-
 .../cs_user_initialization-gas_libby_williams.f90  |    9 +-
 .../cs_user_initialization-pulverized_coal.f90     |    9 +-
 .../cs_user_initialization-richards.f90            |   11 +-
 .../cs_user_initialization-time_step.f90           |    9 +-
 ...user_initialization-unified_combustion_coal.f90 |   14 +-
 src/user_examples/cs_user_lagr_particle.c          |  809 +++
 ...cs_user_lagrangian_particle_tracking_module.f90 |  301 -
 src/user_examples/cs_user_les_inflow-base.f90      |   30 +-
 src/user_examples/cs_user_mass_source_terms.f90    |   11 +-
 .../cs_user_mesh-groups_from_free_faces.c          |   31 +-
 src/user_examples/cs_user_mesh-input-save.c        |  167 +
 src/user_examples/cs_user_mesh-joining.c           |  246 +
 src/user_examples/cs_user_mesh-modify.c            |  184 +
 src/user_examples/cs_user_mesh-periodicity.c       |  323 +
 src/user_examples/cs_user_mesh-quality.c           |  268 +
 src/user_examples/cs_user_mesh-thinwall.c          |  135 +
 ..._metal_structures_source_terms-condensation.f90 |   50 +-
 src/user_examples/cs_user_modules-user-arrays.f90  |  128 +
 src/user_examples/cs_user_parameters-base.c        |   19 +-
 .../cs_user_parameters-cavitation.f90              |   82 +-
 src/user_examples/cs_user_parameters-fans.c        |   13 +-
 .../cs_user_parameters-linear_solvers.c            |   49 +-
 src/user_examples/cs_user_parameters-output.f90    |  100 +-
 src/user_examples/cs_user_parameters-richards.f90  |   41 +-
 src/user_examples/cs_user_parameters-rotation.f90  |  155 +
 .../cs_user_parameters-time_moments.c              |   13 +-
 src/user_examples/cs_user_parameters.f90           | 2194 +++++++
 .../cs_user_performance_tuning-matrix.c            |  136 +
 .../cs_user_performance_tuning-numbering.c         |  153 +
 .../cs_user_performance_tuning-parallel-io.c       |  165 +
 .../cs_user_performance_tuning-partition.c         |  180 +
 .../cs_user_physical_properties-coal_drift.f90     |    4 +-
 ..._user_physical_properties-compressible_flow.f90 |    3 +-
 .../cs_user_physical_properties-richards_sat.f90   |   26 +-
 .../cs_user_physical_properties-richards_unsat.f90 |   21 +-
 .../cs_user_physical_properties-scalar_drift.f90   |    8 +-
 src/user_examples/cs_user_porosity.f90             |    7 +-
 src/user_examples/cs_user_postprocess-sfc.c        |   18 +-
 src/user_examples/cs_user_postprocess.c            |  601 ++
 src/user_examples/cs_user_postprocess_var.f90      |  711 +++
 src/user_examples/cs_user_radiative_transfer.c     |  346 ++
 src/user_examples/cs_user_radiative_transfer_bcs.c |  471 ++
 .../cs_user_radiative_transfer_bcs.f90             |  518 --
 src/user_examples/cs_user_solver-heat-equation.c   |  310 +
 .../cs_user_source_terms-richards_decay.f90        |   62 +-
 .../cs_user_source_terms-scalar_in_a_channel.f90   |   22 +-
 src/user_examples/cs_user_source_terms.f90         |   73 +-
 src/user_examples/cs_user_turbomachinery.c         |  166 +
 src/user_examples/usatch_4spe5reac.f90             |  110 +-
 src/user_examples/usctdz.f90                       |  108 +
 src/user_examples/ushist.f90                       |  353 ++
 src/user_examples/uspt1d.f90                       |  324 +
 src/user_examples/usthht.f90                       |  194 +
 src/user_examples/usvort.f90                       |  533 ++
 src/user_examples/usvosy.f90                       |  244 +
 tests/Makefile.am                                  |    5 +
 tests/cs_blas_test.c                               | 1110 +++-
 tests/cs_rank_neighbors_test.c                     |  274 +
 tests/fvm_selector_test.c                          |  279 +
 1027 files changed, 152243 insertions(+), 105277 deletions(-)

-- 
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