r47476 - in /packages/R/r-cran-lmertest: ./ trunk/ trunk/debian/ trunk/debian/source/ trunk/debian/tests/
tille at users.alioth.debian.org
tille at users.alioth.debian.org
Sun Aug 27 13:07:05 UTC 2017
Author: tille
Date: Sun Aug 27 13:07:04 2017
New Revision: 47476
URL: http://svn.debian.org/wsvn/debian-science/?sc=1&rev=47476
Log:
Inject r-cran-lmertest
Added:
packages/R/r-cran-lmertest/
packages/R/r-cran-lmertest/trunk/
packages/R/r-cran-lmertest/trunk/debian/
packages/R/r-cran-lmertest/trunk/debian/README.source
packages/R/r-cran-lmertest/trunk/debian/README.test
packages/R/r-cran-lmertest/trunk/debian/changelog
packages/R/r-cran-lmertest/trunk/debian/compat
packages/R/r-cran-lmertest/trunk/debian/control
packages/R/r-cran-lmertest/trunk/debian/copyright
packages/R/r-cran-lmertest/trunk/debian/docs
packages/R/r-cran-lmertest/trunk/debian/rules (with props)
packages/R/r-cran-lmertest/trunk/debian/source/
packages/R/r-cran-lmertest/trunk/debian/source/format
packages/R/r-cran-lmertest/trunk/debian/tests/
packages/R/r-cran-lmertest/trunk/debian/tests/control
packages/R/r-cran-lmertest/trunk/debian/tests/generic
packages/R/r-cran-lmertest/trunk/debian/tests/run-unit-test
packages/R/r-cran-lmertest/trunk/debian/watch
Added: packages/R/r-cran-lmertest/trunk/debian/README.source
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/README.source?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/README.source (added)
+++ packages/R/r-cran-lmertest/trunk/debian/README.source Sun Aug 27 13:07:04 2017
@@ -0,0 +1,17 @@
+Explanation for binary files inside source package according to
+ http://lists.debian.org/debian-devel/2013/09/msg00332.html
+
+Files: data/carrots.rda
+Documentation: man/carrots.Rd
+ data from consumer study 103 consumers scored their preference of 12
+ danish carrot types on a scale from 1 to 7
+
+Files: data/ham.rda
+Documentation: man/ham.Rd
+ Conjoint study of dry cured ham
+
+Files: data/TVbo.rda
+Documentation: man/TVbo.Rd
+ Study about TV sets
+
+ -- Andreas Tille <tille at debian.org> Sun, 27 Aug 2017 14:44:49 +0200
Added: packages/R/r-cran-lmertest/trunk/debian/README.test
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/README.test?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/README.test (added)
+++ packages/R/r-cran-lmertest/trunk/debian/README.test Sun Aug 27 13:07:04 2017
@@ -0,0 +1,8 @@
+Notes on how this package can be tested.
+────────────────────────────────────────
+
+To run the unit tests provided by the package you can do
+
+ sh run-unit-test
+
+in this directory.
Added: packages/R/r-cran-lmertest/trunk/debian/changelog
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/changelog?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/changelog (added)
+++ packages/R/r-cran-lmertest/trunk/debian/changelog Sun Aug 27 13:07:04 2017
@@ -0,0 +1,5 @@
+r-cran-lmertest (2.0-33-1) UNRELEASED; urgency=medium
+
+ * Initial release (closes: #xxxxxx)
+
+ -- Andreas Tille <tille at debian.org> Sun, 27 Aug 2017 14:44:49 +0200
Added: packages/R/r-cran-lmertest/trunk/debian/compat
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/compat?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/compat (added)
+++ packages/R/r-cran-lmertest/trunk/debian/compat Sun Aug 27 13:07:04 2017
@@ -0,0 +1 @@
+10
Added: packages/R/r-cran-lmertest/trunk/debian/control
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/control?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/control (added)
+++ packages/R/r-cran-lmertest/trunk/debian/control Sun Aug 27 13:07:04 2017
@@ -0,0 +1,35 @@
+Source: r-cran-lmertest
+Maintainer: Debian Science Team <debian-science-maintainers at lists.alioth.debian.org>
+Uploaders: Andreas Tille <tille at debian.org>
+Section: gnu-r
+Priority: optional
+Build-Depends: debhelper (>= 10),
+ dh-r,
+ r-base-dev,
+ r-cran-matrix,
+ r-cran-lme4 (>= 1.0),
+ r-cran-plyr,
+ r-cran-mass,
+ r-cran-hmisc,
+ r-cran-ggplot2,
+ r-cran-foreign,
+ r-cran-nnet
+Standards-Version: 4.1.0
+Vcs-Browser: https://anonscm.debian.org/viewvc/debian-science/packages/R/r-cran-lmertest/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-science/packages/R/r-cran-lmertest/trunk/
+Homepage: https://cran.r-project.org/package=lmerTest
+
+Package: r-cran-lmertest
+Architecture: all
+Depends: ${R:Depends},
+ ${shlibs:Depends},
+ ${misc:Depends}
+Recommends: ${R:Recommends}
+Suggests: ${R:Suggests}
+Description: GNU R tests in Linear Mixed Effects Models
+ Different kinds of tests for linear mixed effects models as implemented
+ in 'lme4' package are provided. The tests comprise types I - III F tests
+ for fixed effects, LR tests for random effects.
+ The package also provides the calculation of population means for fixed factors
+ with confidence intervals and corresponding plots. Finally the backward
+ elimination of non-significant effects is implemented.
Added: packages/R/r-cran-lmertest/trunk/debian/copyright
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/copyright?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/copyright (added)
+++ packages/R/r-cran-lmertest/trunk/debian/copyright Sun Aug 27 13:07:04 2017
@@ -0,0 +1,29 @@
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: lmerTest
+Upstream-Contact: Per Bruun Brockhoff <perbb at dtu.dk>
+Source: https://cran.r-project.org/package=lmerTest
+
+Files: *
+Copyright: Alexandra Kuznetsova, Per Bruun Brockhoff, Rune Haubo Bojesen Christensen
+License: GPL-2+
+
+Files: debian/*
+Copyright: 2017 Andreas Tille <tille at debian.org>
+License: GPL-2+
+
+License: GPL-2+
+ This program is free software; you can redistribute it
+ and/or modify it under the terms of the GNU General Public
+ License as published by the Free Software Foundation; either
+ version 2 of the License, or (at your option) any later
+ version.
+ .
+ This program is distributed in the hope that it will be
+ useful, but WITHOUT ANY WARRANTY; without even the implied
+ warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ PURPOSE. See the GNU General Public License for more
+ details.
+ .
+ On Debian systems, the full text of the GNU General Public
+ License version 2 can be found in the file
+ `/usr/share/common-licenses/GPL-2'.
Added: packages/R/r-cran-lmertest/trunk/debian/docs
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/docs?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/docs (added)
+++ packages/R/r-cran-lmertest/trunk/debian/docs Sun Aug 27 13:07:04 2017
@@ -0,0 +1,3 @@
+debian/tests/run-unit-test
+debian/README.test
+tests
Added: packages/R/r-cran-lmertest/trunk/debian/rules
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/rules?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/rules (added)
+++ packages/R/r-cran-lmertest/trunk/debian/rules Sun Aug 27 13:07:04 2017
@@ -0,0 +1,5 @@
+#!/usr/bin/make -f
+
+%:
+ dh $@ --buildsystem R
+
Propchange: packages/R/r-cran-lmertest/trunk/debian/rules
------------------------------------------------------------------------------
svn:executable = *
Added: packages/R/r-cran-lmertest/trunk/debian/source/format
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/source/format?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/source/format (added)
+++ packages/R/r-cran-lmertest/trunk/debian/source/format Sun Aug 27 13:07:04 2017
@@ -0,0 +1 @@
+3.0 (quilt)
Added: packages/R/r-cran-lmertest/trunk/debian/tests/control
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/tests/control?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/tests/control (added)
+++ packages/R/r-cran-lmertest/trunk/debian/tests/control Sun Aug 27 13:07:04 2017
@@ -0,0 +1,9 @@
+Tests: generic
+Depends: @,
+Restrictions: allow-stderr
+
+Tests: run-unit-test
+Depends: @,
+Restrictions: allow-stderr
+
+
Added: packages/R/r-cran-lmertest/trunk/debian/tests/generic
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/tests/generic?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/tests/generic (added)
+++ packages/R/r-cran-lmertest/trunk/debian/tests/generic Sun Aug 27 13:07:04 2017
@@ -0,0 +1,7 @@
+#!/bin/sh -e
+
+for testfile in tests/*.R; do
+ echo "BEGIN TEST $testfile"
+ LC_ALL=C R --no-save < $testfile
+done
+
Added: packages/R/r-cran-lmertest/trunk/debian/tests/run-unit-test
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/tests/run-unit-test?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/tests/run-unit-test (added)
+++ packages/R/r-cran-lmertest/trunk/debian/tests/run-unit-test Sun Aug 27 13:07:04 2017
@@ -0,0 +1,17 @@
+#!/bin/sh -e
+
+pkgname=lmerTest
+debname=r-cran-lmertest
+
+if [ "$ADTTMP" = "" ] ; then
+ ADTTMP=`mktemp -d /tmp/${debname}-test.XXXXXX`
+ trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM
+fi
+cd $ADTTMP
+cp -a /usr/share/doc/$debname/tests/* $ADTTMP
+gunzip -r *
+for testfile in *.R; do
+ echo "BEGIN TEST $testfile"
+ LC_ALL=C R --no-save < $testfile
+done
+
Added: packages/R/r-cran-lmertest/trunk/debian/watch
URL: http://svn.debian.org/wsvn/debian-science/packages/R/r-cran-lmertest/trunk/debian/watch?rev=47476&op=file
==============================================================================
--- packages/R/r-cran-lmertest/trunk/debian/watch (added)
+++ packages/R/r-cran-lmertest/trunk/debian/watch Sun Aug 27 13:07:04 2017
@@ -0,0 +1,2 @@
+version=4
+https://cran.r-project.org/src/contrib/lmerTest_([-\d.]*)\.tar\.gz
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