[xmds2] 02/08: Merge tag 'upstream/2.2.3+dfsg'
Rafael Laboissiere
rafael at debian.org
Fri Feb 3 22:46:51 UTC 2017
This is an automated email from the git hooks/post-receive script.
rafael pushed a commit to branch master
in repository xmds2.
commit 3dd193df428081d9787f93a94b566d8addd2e3f2
Merge: 6b13559 9b445c4
Author: Rafael Laboissiere <rafael at debian.org>
Date: Fri Feb 3 16:05:24 2017 -0200
Merge tag 'upstream/2.2.3+dfsg'
Upstream version 2.2.3+dfsg
ReleaseNotes | 31 +
documentation/.buildinfo | 4 +-
documentation/_static/basic.css | 79 +-
documentation/_static/{default.css => classic.css} | 15 +-
documentation/_static/doctools.js | 32 +-
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documentation/_static/file.png | Bin 392 -> 358 bytes
documentation/_static/jquery.js | 10355 ++++++++++++++++++-
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documentation/_static/plus.png | Bin 199 -> 173 bytes
documentation/_static/pygments.css | 3 +
documentation/_static/searchtools.js | 53 +-
documentation/_static/sidebar.js | 4 +-
documentation/_static/underscore.js | 1446 ++-
documentation/_static/up-pressed.png | Bin 372 -> 345 bytes
documentation/_static/up.png | Bin 363 -> 345 bytes
documentation/_static/websupport.js | 30 +-
documentation/advanced_topics.html | 52 +-
documentation/bulirschStoer.html | 34 +-
documentation/developer.html | 148 +-
documentation/doctrees/advanced_topics.doctree | Bin 52291 -> 52173 bytes
documentation/doctrees/bulirschStoer.doctree | Bin 20734 -> 20572 bytes
documentation/doctrees/developer.doctree | Bin 92938 -> 92827 bytes
documentation/doctrees/documentation_toc.doctree | Bin 3907 -> 3765 bytes
documentation/doctrees/environment.pickle | Bin 97684 -> 100897 bytes
documentation/doctrees/faq.doctree | Bin 30171 -> 29989 bytes
documentation/doctrees/index.doctree | Bin 52597 -> 56148 bytes
documentation/doctrees/installation.doctree | Bin 110258 -> 111424 bytes
documentation/doctrees/introduction.doctree | Bin 24126 -> 23961 bytes
documentation/doctrees/licensing.doctree | Bin 114131 -> 114497 bytes
documentation/doctrees/news.doctree | Bin 47188 -> 50801 bytes
documentation/doctrees/news_content.doctree | Bin 45599 -> 49128 bytes
documentation/doctrees/optimisation_hints.doctree | Bin 57194 -> 57134 bytes
documentation/doctrees/reference_elements.doctree | Bin 461656 -> 463397 bytes
documentation/doctrees/reference_index.doctree | Bin 3269 -> 3129 bytes
...eference_installation_and_configuration.doctree | Bin 12706 -> 12545 bytes
documentation/doctrees/reference_schema.doctree | Bin 67572 -> 71274 bytes
.../doctrees/reference_usefulXMLSyntax.doctree | Bin 4601 -> 4458 bytes
documentation/doctrees/tutorial.doctree | Bin 49021 -> 48895 bytes
documentation/doctrees/upgrade.doctree | Bin 6081 -> 5921 bytes
documentation/doctrees/worked_examples.doctree | Bin 197015 -> 197314 bytes
documentation/doctrees/xsil2graphics2.doctree | Bin 6017 -> 5891 bytes
documentation/documentation_toc.html | 36 +-
documentation/faq.html | 42 +-
documentation/genindex.html | 34 +-
documentation/index.html | 64 +-
documentation/installation.html | 113 +-
documentation/introduction.html | 40 +-
documentation/latex/Makefile | 28 +-
documentation/latex/xmds2.aux | 177 +-
documentation/latex/xmds2.idx | 70 +-
documentation/latex/xmds2.ilg | 4 +-
documentation/latex/xmds2.ind | 66 +-
documentation/latex/xmds2.log | 993 +-
documentation/latex/xmds2.out | 18 +-
documentation/latex/xmds2.pdf | Bin 7007925 -> 7020428 bytes
documentation/latex/xmds2.tex | 615 +-
documentation/latex/xmds2.toc | 46 +-
documentation/licensing.html | 30 +-
documentation/news.html | 56 +-
documentation/news_content.html | 56 +-
documentation/objects.inv | Bin 1920 -> 2053 bytes
documentation/optimisation_hints.html | 67 +-
documentation/reference_elements.html | 319 +-
documentation/reference_index.html | 30 +-
.../reference_installation_and_configuration.html | 48 +-
documentation/reference_schema.html | 250 +-
documentation/reference_usefulXMLSyntax.html | 34 +-
documentation/search.html | 28 +-
documentation/searchindex.js | 2 +-
documentation/tutorial.html | 62 +-
documentation/upgrade.html | 32 +-
documentation/worked_examples.html | 160 +-
documentation/xsil2graphics2.html | 32 +-
examples/groundstate_gaussian.xmds | 17 +-
examples/lubrication_equation.xmds | 94 +
man/xmds2.1 | 2 +-
setup.py | 2 +-
testsuite/fast/bessel_cosine_evolution.xmds | 2 +-
testsuite/fast/bessel_cosine_evolution_expected.h5 | Bin 91864 -> 92960 bytes
.../fast/bessel_cosine_evolution_expected.xsil | 27 +-
.../nonlocal_access_multiple_components.xmds | 73 +
...nonlocal_access_multiple_components_expected.h5 | Bin 0 -> 56096 bytes
...nlocal_access_multiple_components_expected.xsil | 96 +
xpdeint/CodeParser.py | 27 +-
xpdeint/Features/Arguments.py | 6 +-
xpdeint/Features/AsciiFormat.py | 6 +-
xpdeint/Features/AutoVectorise.py | 6 +-
xpdeint/Features/Benchmark.py | 6 +-
xpdeint/Features/BinaryFormat.py | 6 +-
xpdeint/Features/Bing.py | 6 +-
xpdeint/Features/CFlags.py | 6 +-
xpdeint/Features/ChunkedOutput.py | 6 +-
xpdeint/Features/Diagnostics.py | 6 +-
xpdeint/Features/ErrorCheck.py | 6 +-
xpdeint/Features/Globals.py | 6 +-
xpdeint/Features/HDF5Format.py | 6 +-
xpdeint/Features/HaltNonFinite.py | 6 +-
xpdeint/Features/MaxIterations.py | 6 +-
xpdeint/Features/OpenMP.py | 6 +-
xpdeint/Features/Output.py | 6 +-
xpdeint/Features/OutputFormat.py | 10 +-
xpdeint/Features/Stochastic.py | 6 +-
xpdeint/Features/Transforms/Basis.py | 6 +-
xpdeint/Features/Transforms/BesselBasis.py | 6 +-
.../Features/Transforms/BesselNeumannTransform.py | 6 +-
xpdeint/Features/Transforms/BesselTransform.py | 6 +-
xpdeint/Features/Transforms/EPBasis.py | 6 +-
.../Features/Transforms/FourierTransformFFTW3.py | 6 +-
.../Transforms/FourierTransformFFTW3MPI.py | 6 +-
.../Transforms/FourierTransformFFTW3Threads.py | 6 +-
xpdeint/Features/Transforms/HermiteGaussEPBasis.py | 6 +-
.../Transforms/HermiteGaussFourierEPBasis.py | 6 +-
.../Features/Transforms/HermiteGaussTransform.py | 6 +-
.../Transforms/HermiteGaussTwiddleBasis.py | 6 +-
xpdeint/Features/Transforms/MMT.py | 6 +-
xpdeint/Features/Transforms/NoTransformMPI.py | 6 +-
.../Features/Transforms/TransformMultiplexer.py | 6 +-
xpdeint/Features/Validation.py | 6 +-
xpdeint/Geometry/BesselDimensionRepresentation.py | 6 +-
.../BesselNeumannDimensionRepresentation.py | 6 +-
xpdeint/Geometry/DimensionRepresentation.py | 6 +-
xpdeint/Geometry/FieldElement.py | 6 +-
xpdeint/Geometry/GeometryElement.py | 6 +-
.../HermiteGaussDimensionRepresentation.py | 6 +-
.../Geometry/NonUniformDimensionRepresentation.py | 6 +-
.../SphericalBesselDimensionRepresentation.py | 6 +-
.../SplitUniformDimensionRepresentation.py | 6 +-
xpdeint/Geometry/UniformDimensionRepresentation.py | 6 +-
xpdeint/HDF5.py | 28 +-
xpdeint/MomentGroupElement.py | 6 +-
xpdeint/Operators/ConstantEXOperator.py | 6 +-
xpdeint/Operators/ConstantIPOperator.py | 6 +-
xpdeint/Operators/CrossPropagationOperator.py | 6 +-
xpdeint/Operators/DeltaAOperator.py | 6 +-
xpdeint/Operators/FilterOperator.py | 6 +-
xpdeint/Operators/FunctionsOperator.py | 6 +-
xpdeint/Operators/NonConstantEXOperator.py | 6 +-
xpdeint/Operators/NonConstantIPOperator.py | 6 +-
xpdeint/Operators/Operator.py | 6 +-
xpdeint/Operators/OperatorContainer.py | 28 +-
xpdeint/Operators/SICDeltaAOperator.py | 6 +-
xpdeint/Preferences.py | 2 +-
xpdeint/ScriptElement.py | 273 +-
xpdeint/ScriptElement.tmpl | 5 +-
xpdeint/Segments/BreakpointSegment.py | 6 +-
xpdeint/Segments/FilterSegment.py | 28 +-
xpdeint/Segments/FilterSegment.tmpl | 4 +
xpdeint/Segments/Integrators/AdaptiveStep.py | 6 +-
xpdeint/Segments/Integrators/FixedStep.py | 28 +-
xpdeint/Segments/Integrators/FixedStepWithCross.py | 6 +-
xpdeint/Segments/Integrators/Integrator.py | 6 +-
xpdeint/Segments/Integrators/MMStepper.py | 6 +-
xpdeint/Segments/Integrators/RK45Stepper.py | 6 +-
xpdeint/Segments/Integrators/RK4Stepper.py | 6 +-
xpdeint/Segments/Integrators/RK89Stepper.py | 6 +-
xpdeint/Segments/Integrators/RK9Stepper.py | 6 +-
.../Segments/Integrators/RichardsonFixedStep.py | 6 +-
xpdeint/Segments/Integrators/SICStepper.py | 6 +-
xpdeint/Segments/Integrators/SIStepper.py | 6 +-
xpdeint/Segments/Integrators/_Integrator.py | 3 +-
xpdeint/Segments/SequenceSegment.py | 6 +-
xpdeint/Segments/TopLevelSequenceElement.py | 6 +-
xpdeint/Segments/_FilterSegment.py | 2 +
xpdeint/Simulation.py | 6 +-
.../AdaptiveMPIMultiPathDriver.py | 6 +-
xpdeint/SimulationDrivers/DistributedMPIDriver.py | 28 +-
xpdeint/SimulationDrivers/MPI.py | 6 +-
xpdeint/SimulationDrivers/MPIMultiPathDriver.py | 6 +-
xpdeint/SimulationDrivers/MultiPathDriver.py | 28 +-
xpdeint/SimulationDrivers/SimulationDriver.py | 6 +-
xpdeint/SimulationElement.py | 6 +-
xpdeint/Stochastic/Generators/DSFMTGenerator.py | 6 +-
xpdeint/Stochastic/Generators/Generator.py | 149 +-
xpdeint/Stochastic/Generators/Generator.tmpl | 43 +-
xpdeint/Stochastic/Generators/MKLGenerator.py | 6 +-
xpdeint/Stochastic/Generators/POSIXGenerator.py | 6 +-
xpdeint/Stochastic/Generators/SolirteGenerator.py | 6 +-
.../GaussianBoxMuellerRandomVariable.py | 6 +-
.../RandomVariables/GaussianMKLRandomVariable.py | 6 +-
.../RandomVariables/GaussianRandomVariable.py | 28 +-
.../GaussianSolirteRandomVariable.py | 6 +-
.../RandomVariables/PoissonianRandomVariable.py | 50 +-
.../RandomVariables/UniformRandomVariable.py | 6 +-
xpdeint/Vectors/ComputedVector.py | 6 +-
xpdeint/Vectors/NoiseVector.py | 6 +-
xpdeint/Vectors/VectorElement.py | 28 +-
xpdeint/Vectors/VectorInitialisation.py | 6 +-
xpdeint/Vectors/VectorInitialisationFromCDATA.py | 6 +-
xpdeint/Vectors/VectorInitialisationFromHDF5.py | 6 +-
xpdeint/Vectors/VectorInitialisationFromXSIL.tmpl | 4 +-
xpdeint/Version.py | 2 +-
xpdeint/XMDS2Parser.py | 64 +-
xpdeint/XSILFile.py | 2 +-
xpdeint/includes/xpdeint.h | 4 +-
xpdeint/support/wscript | 1 -
xpdeint/support/xpdeint.rnc | 8 +-
xpdeint/support/xpdeint.rng | 22 +-
xpdeint/xsil2graphics2/MathematicaImport.py | 6 +-
xpdeint/xsil2graphics2/MatlabOctaveImport.py | 6 +-
xpdeint/xsil2graphics2/PythonImport.py | 6 +-
xpdeint/xsil2graphics2/RImport.py | 6 +-
203 files changed, 15036 insertions(+), 2560 deletions(-)
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