[ovito] 04/05: Merge tag 'upstream/2.8.1+dfsg1'
Anton Gladky
gladk at moszumanska.debian.org
Sun Jan 8 15:00:33 UTC 2017
This is an automated email from the git hooks/post-receive script.
gladk pushed a commit to branch master
in repository ovito.
commit ef851f9fc95127ded1916fd3e3feaafe3aa6017a
Merge: cf985df 47c0aff
Author: Anton Gladky <gladk at debian.org>
Date: Sun Jan 8 15:50:14 2017 +0100
Merge tag 'upstream/2.8.1+dfsg1'
Upstream version 2.8.1+dfsg1
.gitlab-ci.yml | 1 +
CHANGELOG.txt | 25 +
CMakeLists.txt | 23 +-
cmake/Documentation.cmake | 7 -
cmake/FindQwt.cmake | 15 +
cmake/FixupMacBundle.cmake | 130 +-
cmake/Packaging.cmake | 13 +
cmake/Plugins.cmake | 12 +-
cmake/Version.cmake | 2 +-
doc/develop/build_windows_howto.txt | 8 +
doc/develop/feature_requests.txt | 12 +-
doc/manual/Chapter_Installation.docbook | 5 +-
doc/manual/development/build_linux.docbook | 6 +-
.../images/modifiers/python_script_code_editor.png | Bin 0 -> 20870 bytes
.../images/modifiers/python_script_panel.png | Bin 17367 -> 9134 bytes
.../python_script_overlay_code_editor.png | Bin 0 -> 39576 bytes
.../python_script_overlay_panel.png | Bin 42631 -> 5760 bytes
.../modifiers/particles/python_script.docbook | 37 +-
.../modifiers/particles/voronoi_analysis.docbook | 14 +-
.../particles/wigner_seitz_analysis.docbook | 11 +-
.../overlays/python_script_overlay.docbook | 31 +-
.../viewports/overlays/text_label_overlay.docbook | 24 +-
doc/python/example_snippets/msd_calculation.py | 34 +
.../example_snippets/nearest_neighbor_finder.py | 7 +-
.../order_parameter_calculation.py | 70 +
doc/python/example_snippets/simulation.0.dump | 9414 ++++++++++----------
doc/python/example_snippets/simulation.100.dump | 9414 ++++++++++----------
.../example_snippets/wigner_seitz_example.py | 53 +
doc/python/introduction/examples.rst | 65 +-
doc/python/introduction/running.rst | 15 +-
src/3rdparty/pybind11/attr.h | 28 +-
src/3rdparty/pybind11/cast.h | 333 +-
src/3rdparty/pybind11/common.h | 27 +-
src/3rdparty/pybind11/descr.h | 12 +-
src/3rdparty/pybind11/eigen.h | 8 +-
src/3rdparty/pybind11/eval.h | 22 +-
src/3rdparty/pybind11/functional.h | 6 +-
src/3rdparty/pybind11/numpy.h | 245 +-
src/3rdparty/pybind11/pybind11.h | 172 +-
src/3rdparty/pybind11/pytypes.h | 271 +-
src/3rdparty/pybind11/stl.h | 57 +-
src/3rdparty/qwt/CMakeLists.txt | 206 +-
src/CMakeLists.txt | 5 +
src/core/CMakeLists.txt | 4 +
src/core/app/Application.cpp | 5 +-
src/core/dataset/DataSetContainer.cpp | 7 +-
src/core/dataset/importexport/FileExporter.h | 2 +-
src/core/plugins/PluginManager.cpp | 5 +-
src/core/utilities/DeferredMethodInvocation.h | 41 +-
src/core/utilities/concurrent/TaskManager.cpp | 9 +-
src/gui/dataset/GuiDataSetContainer.cpp | 7 +-
src/gui/dialogs/GeneralSettingsPage.cpp | 4 +
src/gui/dialogs/GeneralSettingsPage.h | 2 +
src/gui/mainwin/cmdpanel/ModifyCommandPage.cpp | 11 +-
src/gui/resources/gui.qrc | 1 +
.../command_panel/about_panel_no_updates.html | 13 +
src/gui/resources/mainwin/window_icon_150.png | Bin 0 -> 25075 bytes
src/gui/resources/mainwin/window_icon_44.png | Bin 0 -> 4246 bytes
src/gui/viewport/ViewportWindow.cpp | 53 +-
src/gui/viewport/ViewportWindow.h | 12 +-
src/gui/viewport/input/NavigationModes.cpp | 11 +-
src/gui/viewport/input/XFormModes.cpp | 11 +-
.../viewport/overlay/TextLabelOverlayEditor.cpp | 2 +-
src/main/resources/Info.plist | 2 +-
src/main/resources/appxmanifest.xml | 36 +
src/opengl_renderer/OpenGLSceneRenderer.cpp | 7 +
src/plugins/CMakeLists.txt | 1 +
src/plugins/crystalanalysis/exporter/CAExporter.h | 2 +-
.../gui/util/DislocationInformationApplet.cpp | 2 +-
.../modifier/dxa/StructureAnalysis.cpp | 4 +-
src/plugins/netcdf/CMakeLists.txt | 3 +
src/plugins/netcdf/NetCDFExporter.cpp | 278 +-
src/plugins/netcdf/NetCDFExporter.h | 49 +
src/plugins/netcdf/NetCDFImporter.cpp | 49 +-
src/plugins/particles/export/ParticleExporter.cpp | 4 +-
src/plugins/particles/export/ParticleExporter.h | 4 +-
.../particles/export/lammps/LAMMPSDataExporter.cpp | 32 +-
.../gui/export/lammps/LAMMPSDataExporterEditor.cpp | 1 +
.../gui/import/lammps/LAMMPSDataImporterEditor.cpp | 3 +-
.../particles/gui/import/xyz/XYZImporterEditor.cpp | 9 +
.../binandreduce/BinAndReduceModifierEditor.cpp | 18 +-
.../CoordinationNumberModifierEditor.cpp | 6 +-
.../analysis/histogram/HistogramModifierEditor.cpp | 8 +-
.../PolyhedralTemplateMatchingModifierEditor.cpp | 8 +-
.../scatterplot/ScatterPlotModifierEditor.cpp | 10 +-
.../gui/objects/SimulationCellObjectEditor.cpp | 4 +-
.../particles/gui/util/ParticlePickingHelper.cpp | 2 +-
src/plugins/particles/import/gsd/GSDFile.h | 2 +
.../import/lammps/LAMMPSBinaryDumpImporter.cpp | 12 +-
.../particles/import/lammps/LAMMPSDataImporter.cpp | 28 +
.../import/lammps/LAMMPSTextDumpImporter.cpp | 296 +-
src/plugins/particles/import/xyz/XYZImporter.cpp | 10 +-
src/plugins/particles/import/xyz/XYZImporter.h | 22 +-
.../bondangle/BondAngleAnalysisModifier.cpp | 2 +-
.../centrosymmetry/CentroSymmetryModifier.cpp | 2 +-
.../cna/CommonNeighborAnalysisModifier.cpp | 2 +-
.../analysis/diamond/IdentifyDiamondModifier.cpp | 2 +-
.../ptm/PolyhedralTemplateMatchingModifier.cpp | 2 +-
.../ptm/PolyhedralTemplateMatchingModifier.h | 2 +-
.../analysis/voronoi/VoronoiAnalysisModifier.cpp | 12 +-
.../modifier/coloring/ColorCodingModifier.cpp | 5 +-
.../modifier/selection/ExpandSelectionModifier.cpp | 2 +-
src/plugins/particles/objects/ParticleDisplay.cpp | 19 +-
.../python/ovito/data/particles/__init__.py | 49 +-
.../particles/scripting/ImporterBinding.cpp | 6 +-
.../particles/scripting/ModifierBinding.cpp | 11 +-
src/plugins/particles/scripting/PythonBinding.h | 11 +-
.../particles/scripting/PythonInterface.cpp | 9 +-
src/plugins/particles/util/NearestNeighborFinder.h | 16 +-
.../particles/util/ParticleExpressionEvaluator.cpp | 20 +-
src/plugins/povray/gui/POVRayRendererEditor.cpp | 5 +-
src/plugins/povray/scripting/PythonInterface.cpp | 20 +-
src/plugins/pyscript/CMakeLists.txt | 24 +-
src/plugins/pyscript/binding/AppBinding.cpp | 11 +-
src/plugins/pyscript/binding/PythonBinding.h | 177 +-
src/plugins/pyscript/engine/ScriptEngine.cpp | 244 +-
src/plugins/pyscript/engine/ScriptEngine.h | 8 +-
.../pyscript/extensions/PythonScriptModifier.cpp | 18 +-
.../pyscript/extensions/PythonViewportOverlay.cpp | 43 +-
.../pyscript/extensions/PythonViewportOverlay.h | 2 +-
src/plugins/pyscript/gui/CMakeLists.txt | 9 +-
src/plugins/pyscript/gui/GUIBinding.cpp | 6 +-
src/plugins/pyscript/gui/ObjectScriptEditor.cpp | 286 +
src/plugins/pyscript/gui/ObjectScriptEditor.h | 116 +
.../pyscript/gui/PythonScriptModifierEditor.cpp | 95 +-
.../pyscript/gui/PythonScriptModifierEditor.h | 10 +-
.../pyscript/gui/PythonViewportOverlayEditor.cpp | 106 +-
.../pyscript/gui/PythonViewportOverlayEditor.h | 10 +-
.../pyscript/gui/resources/icons/edit_redo.png | Bin 0 -> 810 bytes
.../pyscript/gui/resources/icons/edit_undo.png | Bin 0 -> 1011 bytes
.../pyscript/gui/resources/icons/file_open.png | Bin 0 -> 1126 bytes
.../pyscript/gui/resources/icons/file_save_as.png | Bin 0 -> 1097 bytes
.../pyscript/gui/resources/icons/run_script.png | Bin 0 -> 864 bytes
.../pyscript/gui/resources/pyscript_gui.qrc | 14 +
src/plugins/pyscript/python/ovito/__init__.py | 6 +-
src/plugins/pyscript/python/ovito/io/__init__.py | 4 +-
src/plugins/pyscript/python/ovito/vis/__init__.py | 2 +
src/plugins/pyscript/resources/ovitos | 2 +-
src/plugins/tachyon/gui/TachyonRendererEditor.cpp | 5 +-
src/plugins/tachyon/scripting/PythonInterface.cpp | 22 +-
tests/files/LAMMPS/atom_style_sphere.data.gz | Bin 0 -> 92271 bytes
tests/scripts/test_suite/cutoff_neighbor_finder.py | 4 +-
tests/scripts/test_suite/global_namespace.py | 6 +-
tests/scripts/test_suite/import_file.py | 8 +
.../scripts/test_suite/nearest_neighbor_finder.py | 34 +
.../scripts/test_suite/python_viewport_overlay.py | 4 +-
tests/scripts/test_suite/render_settings.py | 12 +
tests/scripts/test_suite/render_to_qimage.py | 1 +
tests/scripts/test_suite/system_exit.py | 4 +
149 files changed, 12556 insertions(+), 10886 deletions(-)
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