[yade] branch master updated (80cdcd1 -> b6d354d)

Anton Gladky gladk at moszumanska.debian.org
Fri Jan 20 17:00:38 UTC 2017


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gladk pushed a change to branch master
in repository yade.

      from  80cdcd1   Update changelog.
      adds  4b5edc3   New upstream version 2017.01a
       new  31582eb   Merge tag 'upstream/2017.01a'
       new  09577db   Update/Remove patches.
       new  d763fbf   Set compat level to 10.
       new  b6d354d   Update changelog.

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repository and will be described in separate emails.  The revisions
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Summary of changes:
 CMakeLists.txt                                     |   40 +-
 ChangeLog                                          |  108 +
 RELEASE                                            |    2 +-
 cMake/FindCLP.cmake                                |   42 +
 core/Clump.cpp                                     |  234 +-
 core/Clump.hpp                                     |    6 +-
 core/PartialEngine.hpp                             |    4 +-
 core/main/main.py.in                               |   11 +-
 debian/changelog                                   |    8 +
 debian/compat                                      |    2 +-
 debian/control                                     |    2 +-
 debian/patches/01_remove_google_analytics.patch    |    6 +-
 debian/patches/05_reproducible-builds.patch        |  192 --
 debian/patches/06_fixCrash.patch                   |   26 -
 debian/patches/08_fix-FTBFS-bosst162.patch         |   23 -
 debian/patches/10_ipython5_fix.patch               |   24 -
 debian/patches/series                              |    5 -
 doc/citing_yade.bib                                |    8 +-
 doc/how-to-release.md                              |   12 +
 doc/sphinx/book/confBook.py                        |   12 +-
 doc/sphinx/book/confManual.py                      |   12 +-
 doc/sphinx/book/confReference.py                   |   12 +-
 doc/sphinx/book/confTheory.py                      |   12 +-
 doc/sphinx/conf.py                                 |   83 +-
 doc/sphinx/installation.rst                        |   29 +-
 ...hon_directive200.py => ipython_directive500.py} |   74 +-
 doc/sphinx/tutorial/01-bouncing-sphere.py          |    4 +-
 doc/sphinx/tutorial/02-gravity-deposition.py       |    4 +-
 doc/sphinx/tutorial/03-oedometric-test.py          |    4 +-
 doc/sphinx/tutorial/04-periodic-simple-shear.py    |    4 +-
 doc/sphinx/tutorial/05-3d-postprocessing.py        |    4 +-
 doc/sphinx/user.rst                                |   26 +-
 doc/yade-articles.bib                              |   97 +-
 doc/yade-conferences.bib                           |   33 +
 doc/yade-theses.bib                                |    8 +
 examples/HydroForceEngine/buoyantParticles.py      |  104 +
 examples/HydroForceEngine/fluidizedBed.py          |  172 ++
 .../HydroForceEngine/sedimentTransportExample.py   |  421 +++
 examples/PotentialBlocks/cubePBscaled.py           |  298 ++
 .../CapillaryPhys-example.py                       |    0
 examples/capillaryLaplaceYoung/README.txt          |   35 +
 examples/capillaryLaplaceYoung/capillaryBridge.py  |   50 +
 examples/capillaryLaplaceYoung/solveLaplace_uc.m   |  105 +
 examples/capillaryLaplaceYoung/solveLiqBridge.m    |  279 ++
 examples/capillaryLaplaceYoung/writesCapFile.m     |  255 ++
 examples/cylinders/cylinderconnection-roots.py     |    6 +-
 examples/polyhedra/splitter.py                     |   54 +
 examples/test/pack-inConvexPolyhedron.py           |   62 +
 gui/qt5/__init__.py                                |   25 +-
 lib/base/Math.hpp                                  |    3 +-
 lib/serialization/Serializable.cpp                 |    2 -
 lib/triangulation/FlowBoundingSphere.hpp           |    2 +-
 lib/triangulation/FlowBoundingSphere.ipp           |   43 +-
 lib/triangulation/FlowBoundingSphereLinSolv.ipp    |   11 +-
 lib/triangulation/Network.hpp                      |    3 +-
 lib/triangulation/Network.ipp                      |   68 +-
 lib/triangulation/PeriodicFlow.hpp                 |   18 +-
 lib/triangulation/RegularTriangulation.h           |   18 +-
 lib/triangulation/Tesselation.h                    |    2 +
 lib/triangulation/Tesselation.ipp                  |   10 +
 pkg/common/ForceEngine.cpp                         |   61 +-
 pkg/common/ForceEngine.hpp                         |    2 +
 pkg/common/Gl1_PotentialBlock.cpp                  | 1102 ++++++++
 pkg/common/Gl1_PotentialBlock.hpp                  |  196 ++
 pkg/common/InsertionSortCollider.cpp               |    3 +
 pkg/common/InteractionLoop.cpp                     |   17 +-
 pkg/common/InteractionLoop.hpp                     |    8 +-
 pkg/common/KinematicEngines.hpp                    |    6 +-
 pkg/dem/BlockGen.cpp                               | 2882 ++++++++++++++++++++
 pkg/dem/BlockGen.hpp                               |  260 ++
 pkg/dem/BubbleMat.hpp                              |    2 +-
 pkg/dem/CapillaryPhys.hpp                          |    2 +
 pkg/dem/ConcretePM.cpp                             |    7 +-
 pkg/dem/ConcretePM.hpp                             |    2 +-
 pkg/dem/DelaunayInterpolation.hpp                  |    1 -
 pkg/dem/Ig2_PB_PB_ScGeom.cpp                       | 2639 ++++++++++++++++++
 pkg/dem/Ig2_PB_PB_ScGeom.hpp                       |  147 +
 pkg/dem/KnKsPBLaw.cpp                              |  646 +++++
 pkg/dem/{KnKsLaw.hpp => KnKsPBLaw.hpp}             |  121 +-
 pkg/dem/Law2_ScGeom_CapillaryPhys_Capillarity.cpp  |  111 +-
 pkg/dem/Law2_ScGeom_CapillaryPhys_Capillarity.hpp  |    9 +-
 pkg/dem/Law2_ScGeom_CapillaryPhys_Capillarity1.cpp |    7 +-
 pkg/dem/MortarMat.hpp                              |    2 +-
 pkg/dem/PotentialBlock.cpp                         |  106 +
 pkg/dem/PotentialBlock.hpp                         |  122 +
 ...alParticle2AABB.cpp => PotentialBlock2AABB.cpp} |   70 +-
 pkg/dem/PotentialBlock2AABB.hpp                    |   24 +
 pkg/dem/RockBolt.cpp                               |  611 +++++
 pkg/dem/RockBolt.hpp                               |  112 +
 pkg/dem/RockLiningGlobal.cpp                       |  772 ++++++
 pkg/dem/RockLiningGlobal.hpp                       |  167 ++
 pkg/dem/STLImporter.hpp                            |   17 +-
 pkg/dem/ScGeom.cpp                                 |   15 +
 pkg/dem/ScGeom.hpp                                 |    2 +
 pkg/dem/TriaxialStressController.hpp               |    2 +-
 pkg/dem/ViscoelasticPM.cpp                         |    7 +-
 .../DeformableCohesiveElement.hpp                  |    2 +
 pkg/pfv/FlowEngine.hpp.in                          |   20 +-
 pkg/pfv/FlowEngine.ipp.in                          |   37 +-
 pkg/pfv/TwoPhaseFlowEngine.cpp                     |  569 +++-
 pkg/pfv/TwoPhaseFlowEngine.hpp                     |  148 +-
 pkg/pfv/UnsaturatedEngine.cpp                      |  465 +---
 py/3rd-party/pygts-0.3.1/pygts.c                   |    5 -
 py/_polyhedra_utils.cpp                            |   21 +-
 py/_utils.cpp                                      |    6 +-
 py/_utils.hpp                                      |    2 -
 py/pack/pack.py                                    |   72 +
 py/utils.py                                        |    7 +-
 py/wrapper/yadeWrapper.cpp                         |   49 +
 scripts/HTML.py                                    |  493 ----
 scripts/default-test.py                            |  110 -
 scripts/hackett-warn-replace.py                    |  205 --
 scripts/hackett.py                                 |  243 --
 scripts/installOnUbuntu.sh                         |   24 -
 scripts/make-release.sh                            |   13 -
 scripts/regression-tests.py                        |   20 -
 scripts/scanreplace.py                             |   19 -
 scripts/yade-exec-wrapper                          |   22 -
 scripts/ysl1.py                                    |   79 -
 119 files changed, 13635 insertions(+), 2475 deletions(-)
 create mode 100755 cMake/FindCLP.cmake
 delete mode 100644 debian/patches/05_reproducible-builds.patch
 delete mode 100644 debian/patches/06_fixCrash.patch
 delete mode 100644 debian/patches/08_fix-FTBFS-bosst162.patch
 delete mode 100644 debian/patches/10_ipython5_fix.patch
 create mode 100644 doc/how-to-release.md
 copy doc/sphinx/{ipython_directive200.py => ipython_directive500.py} (94%)
 create mode 100644 examples/HydroForceEngine/buoyantParticles.py
 create mode 100644 examples/HydroForceEngine/fluidizedBed.py
 create mode 100644 examples/HydroForceEngine/sedimentTransportExample.py
 create mode 100755 examples/PotentialBlocks/cubePBscaled.py
 rename examples/{ => capillaryLaplaceYoung}/CapillaryPhys-example.py (100%)
 create mode 100644 examples/capillaryLaplaceYoung/README.txt
 create mode 100644 examples/capillaryLaplaceYoung/capillaryBridge.py
 create mode 100644 examples/capillaryLaplaceYoung/solveLaplace_uc.m
 create mode 100644 examples/capillaryLaplaceYoung/solveLiqBridge.m
 create mode 100644 examples/capillaryLaplaceYoung/writesCapFile.m
 create mode 100644 examples/polyhedra/splitter.py
 create mode 100644 examples/test/pack-inConvexPolyhedron.py
 create mode 100755 pkg/common/Gl1_PotentialBlock.cpp
 create mode 100755 pkg/common/Gl1_PotentialBlock.hpp
 create mode 100755 pkg/dem/BlockGen.cpp
 create mode 100755 pkg/dem/BlockGen.hpp
 create mode 100755 pkg/dem/Ig2_PB_PB_ScGeom.cpp
 create mode 100755 pkg/dem/Ig2_PB_PB_ScGeom.hpp
 create mode 100755 pkg/dem/KnKsPBLaw.cpp
 copy pkg/dem/{KnKsLaw.hpp => KnKsPBLaw.hpp} (64%)
 mode change 100644 => 100755
 create mode 100755 pkg/dem/PotentialBlock.cpp
 create mode 100755 pkg/dem/PotentialBlock.hpp
 copy pkg/dem/{PotentialParticle2AABB.cpp => PotentialBlock2AABB.cpp} (55%)
 mode change 100644 => 100755
 create mode 100755 pkg/dem/PotentialBlock2AABB.hpp
 create mode 100755 pkg/dem/RockBolt.cpp
 create mode 100755 pkg/dem/RockBolt.hpp
 create mode 100755 pkg/dem/RockLiningGlobal.cpp
 create mode 100755 pkg/dem/RockLiningGlobal.hpp
 delete mode 100644 scripts/HTML.py
 delete mode 100644 scripts/default-test.py
 delete mode 100644 scripts/hackett-warn-replace.py
 delete mode 100644 scripts/hackett.py
 delete mode 100755 scripts/installOnUbuntu.sh
 delete mode 100644 scripts/make-release.sh
 delete mode 100644 scripts/regression-tests.py
 delete mode 100644 scripts/scanreplace.py
 delete mode 100755 scripts/yade-exec-wrapper
 delete mode 100644 scripts/ysl1.py

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