[r-cran-vgam] 18/63: Import Debian patch 0.7-10-1
Andreas Tille
tille at debian.org
Tue Jan 24 13:54:25 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository r-cran-vgam.
commit 120dbe111a39e1d45974481be169eb4e170a0582
Merge: 591a14e ed1fa42
Author: Chris Lawrence <lawrencc at debian.org>
Date: Tue Mar 30 21:21:11 2010 -0500
Import Debian patch 0.7-10-1
BUGS | 151 +
DESCRIPTION | 8 +-
NAMESPACE | 7 +-
NEWS | 30 +
R/aamethods.q | 75 +-
R/add1.vglm.q | 2 +-
R/attrassign.R | 2 +-
R/bAIC.q | 44 +-
R/build.terms.vlm.q | 34 +-
R/calibrate.q | 90 +-
R/cao.R | 58 +-
R/cao.fit.q | 492 ++--
R/coef.vlm.q | 28 +-
R/cqo.R | 3 +-
R/cqo.fit.q | 369 +--
R/deviance.vlm.q | 4 +-
R/effects.vglm.q | 2 +-
R/{family.aunivariate.q => family.aunivariate.R} | 234 +-
R/{family.basics.q => family.basics.R} | 293 +-
R/{family.binomial.q => family.binomial.R} | 442 +--
R/{family.bivariate.q => family.bivariate.R} | 429 +--
R/{family.categorical.q => family.categorical.R} | 573 ++--
R/{family.censored.q => family.censored.R} | 142 +-
R/{family.circular.q => family.circular.R} | 76 +-
R/{family.extremes.q => family.extremes.R} | 622 ++---
R/{family.fishing.q => family.fishing.R} | 13 +-
R/{family.functions.q => family.functions.R} | 58 +-
R/{family.genetic.q => family.genetic.R} | 134 +-
R/{family.glmgam.q => family.glmgam.R} | 344 +--
R/{family.loglin.q => family.loglin.R} | 18 +-
R/{family.mixture.q => family.mixture.R} | 110 +-
R/{family.nonlinear.q => family.nonlinear.R} | 46 +-
R/{family.normal.q => family.normal.R} | 230 +-
R/{family.positive.q => family.positive.R} | 118 +-
R/{family.qreg.q => family.qreg.R} | 435 +--
R/{family.rcqo.q => family.rcqo.R} | 122 +-
R/{family.rrr.q => family.rrr.R} | 838 +++---
R/{family.survival.q => family.survival.R} | 80 +-
R/{family.ts.q => family.ts.R} | 69 +-
R/{family.univariate.q => family.univariate.R} | 3243 +++++++++++-----------
R/{family.vglm.q => family.vglm.R} | 8 +-
R/{family.zeroinf.q => family.zeroinf.R} | 523 ++--
R/{fitted.vlm.q => fitted.vlm.R} | 18 +-
R/formula.vlm.q | 28 +-
R/generic.q | 2 +-
R/links.q | 479 ++--
R/logLik.vlm.q | 10 +-
R/model.matrix.vglm.q | 70 +-
R/mux.q | 76 +-
R/plot.vglm.q | 219 +-
R/predict.vgam.q | 120 +-
R/predict.vglm.q | 36 +-
R/predict.vlm.q | 106 +-
R/print.vglm.q | 36 +-
R/print.vlm.q | 16 +-
R/qrrvglm.control.q | 54 +-
R/qtplot.q | 155 +-
R/residuals.vlm.q | 76 +-
R/rrvglm.R | 62 +-
R/rrvglm.control.q | 54 +-
R/rrvglm.fit.q | 175 +-
R/s.q | 12 +-
R/s.vam.q | 38 +-
R/smart.R | 94 +-
R/step.vglm.q | 2 +-
R/summary.vgam.q | 70 +-
R/summary.vglm.q | 70 +-
R/summary.vlm.q | 50 +-
R/uqo.R | 218 +-
R/vgam.R | 81 +-
R/vgam.control.q | 28 +-
R/vgam.fit.q | 90 +-
R/vgam.match.q | 26 +-
R/vglm.R | 70 +-
R/vglm.control.q | 34 +-
R/vglm.fit.q | 100 +-
R/vlm.R | 46 +-
R/vlm.wfit.q | 55 +-
R/vsmooth.spline.q | 154 +-
R/zzz.R | 2 +-
data/backPain.R | 5 +
data/backPain.txt | 102 +
data/{chest.txt => chestnz.txt} | 0
data/nzmarital.R | 1809 ++++++++++++
debian/changelog | 6 +
debian/control | 2 +-
debian/source/format | 1 +
inst/CITATION | 62 +
inst/doc/categoricalVGAM.Rnw | 2559 +++++++++++++++++
inst/doc/categoricalVGAM.pdf | Bin 0 -> 2956343 bytes
inst/doc/categoricalVGAMbib.bib | 611 ++++
inst/doc/jss.bst | 1647 +++++++++++
inst/doc/jss.cls | 473 ++++
man/AA.Aa.aa.Rd | 1 -
man/AB.Ab.aB.ab2.Rd | 1 -
man/ABO.Rd | 1 -
man/AICvlm.Rd | 8 +-
man/BratUC.Rd | 13 +-
man/Coef.qrrvglm-class.Rd | 4 +-
man/Coef.qrrvglm.Rd | 6 +-
man/CommonVGAMffArguments.Rd | 36 +-
man/DeLury.Rd | 5 +
man/Links.Rd | 26 +-
man/Opt.Rd | 14 +-
man/SurvS4-class.Rd | 4 +-
man/{Surv.Rd => SurvS4.Rd} | 17 +-
man/Tol.Rd | 16 +-
man/VGAM-package.Rd | 42 +-
man/acat.Rd | 21 +-
man/alaplace3.Rd | 44 +-
man/amh.Rd | 3 +-
man/amlbinomial.Rd | 22 +-
man/amlexponential.Rd | 23 +-
man/amlnormal.Rd | 55 +-
man/amlpoisson.Rd | 24 +-
man/auuc.Rd | 6 +-
man/backPain.Rd | 52 +
man/benfUC.Rd | 21 +-
man/benini.Rd | 10 +-
man/beniniUC.Rd | 11 +-
man/beta.ab.Rd | 16 +-
man/betaII.Rd | 6 +-
man/betabin.ab.Rd | 11 +-
man/betabinUC.Rd | 16 +-
man/betabinomial.Rd | 19 +-
man/betaff.Rd | 20 +-
man/betageomUC.Rd | 5 +-
man/betageometric.Rd | 14 +-
man/betanormUC.Rd | 26 +-
man/betaprime.Rd | 18 +-
man/binom2.or.Rd | 19 +-
man/binom2.orUC.Rd | 5 +-
man/binom2.rho.Rd | 8 +-
man/binom2.rhoUC.Rd | 2 +-
man/binomialff.Rd | 41 +-
man/bisa.Rd | 21 +-
man/borel.tanner.Rd | 4 +-
man/brat.Rd | 94 +-
man/bratt.Rd | 99 +-
man/calibrate.qrrvglm.Rd | 2 +
man/calibrate.qrrvglm.control.Rd | 5 +-
man/cao.Rd | 28 +-
man/cao.control.Rd | 47 +-
man/cardioid.Rd | 8 +-
man/cauchit.Rd | 10 +-
man/cauchy.Rd | 15 +-
man/ccoef-methods.Rd | 2 +-
man/ccoef.Rd | 2 +
man/cenpoisson.Rd | 32 +-
man/cgumbel.Rd | 5 +-
man/{chest.Rd => chestnz.Rd} | 8 +-
man/chisq.Rd | 6 +-
man/cloglog.Rd | 7 +
man/cnormal1.Rd | 18 +-
man/cqo.Rd | 121 +-
man/cratio.Rd | 23 +-
man/cumulative.Rd | 72 +-
man/dagum.Rd | 6 +-
man/dcnormal1.Rd | 4 +-
man/deplot.lmscreg.Rd | 5 +-
man/dexpbinomial.Rd | 5 +-
man/dirichlet.Rd | 10 +-
man/erf.Rd | 20 +-
man/erlang.Rd | 11 +-
man/expexp.Rd | 6 +-
man/expexp1.Rd | 12 +-
man/exponential.Rd | 24 +-
man/felix.Rd | 4 +-
man/fff.Rd | 48 +-
man/fgm.Rd | 3 +-
man/fisk.Rd | 5 +-
man/fnormal1.Rd | 14 +-
man/frechet.Rd | 8 +-
man/freund61.Rd | 7 +-
man/fsqrt.Rd | 8 +-
man/gamma1.Rd | 4 +-
man/gamma2.Rd | 18 +-
man/gamma2.ab.Rd | 15 +-
man/gammahyp.Rd | 12 +-
man/garma.Rd | 12 +-
man/gaussianff.Rd | 16 +-
man/genbetaII.Rd | 6 +-
man/genpoisson.Rd | 10 +-
man/geometric.Rd | 27 +-
man/gev.Rd | 17 +-
man/ggamma.Rd | 18 +-
man/golf.Rd | 18 +-
man/gpd.Rd | 43 +-
man/gumbel.Rd | 22 +-
man/gumbelIbiv.Rd | 10 +-
man/hspider.Rd | 16 +-
man/hzeta.Rd | 10 +-
man/hzetaUC.Rd | 1 +
man/iam.Rd | 4 -
man/identity.Rd | 1 +
man/inv.gaussianff.Rd | 3 +-
man/invparalogistic.Rd | 2 +-
man/kumar.Rd | 15 +-
man/laplace.Rd | 18 +-
man/laplaceUC.Rd | 7 +-
man/leipnik.Rd | 14 +-
man/lerch.Rd | 5 +-
man/levy.Rd | 13 +-
man/lgammaUC.Rd | 4 +-
man/lgammaff.Rd | 15 +-
man/lino.Rd | 8 +-
man/linoUC.Rd | 4 +-
man/lirat.Rd | 3 +-
man/lms.bcg.Rd | 20 +-
man/lms.bcn.Rd | 20 +-
man/lms.yjn.Rd | 15 +-
man/logUC.Rd | 3 +-
man/logff.Rd | 30 +-
man/logistic.Rd | 14 +-
man/logit.Rd | 8 +-
man/loglapUC.Rd | 2 +-
man/loglaplace.Rd | 3 +-
man/loglinb2.Rd | 11 +-
man/loglinb3.Rd | 3 +
man/loglog.Rd | 1 +
man/lognormal.Rd | 16 +-
man/logoff.Rd | 5 +-
man/lomax.Rd | 10 +-
man/lqnorm.Rd | 19 +-
man/lv.Rd | 8 +-
man/lvplot.qrrvglm.Rd | 50 +-
man/lvplot.rrvglm.Rd | 11 +-
man/maxwell.Rd | 5 +-
man/{MaxwellUC.Rd => maxwellUC.Rd} | 8 +-
man/mccullagh89.Rd | 8 +-
man/mckaygamma2.Rd | 6 +-
man/micmen.Rd | 5 +-
man/mix2exp.Rd | 22 +-
man/mix2normal1.Rd | 22 +-
man/mix2poisson.Rd | 22 +-
man/multinomial.Rd | 45 +-
man/negbinomial.Rd | 31 +-
man/normal1.Rd | 14 +-
man/nzmarital.Rd | 49 +
man/paralogistic.Rd | 12 +-
man/pareto1.Rd | 13 +-
man/paretoIV.Rd | 6 +-
man/persp.qrrvglm.Rd | 12 +-
man/plackUC.Rd | 9 +-
man/plotdeplot.lmscreg.Rd | 3 +-
man/plotqtplot.lmscreg.Rd | 2 +-
man/plotvgam.Rd | 11 +-
man/plotvgam.control.Rd | 14 +-
man/pneumo.Rd | 3 +-
man/poissonff.Rd | 32 +-
man/poissonp.Rd | 13 +-
man/polf.Rd | 33 +-
man/polonoUC.Rd | 6 +-
man/posbinomUC.Rd | 11 +-
man/posbinomial.Rd | 25 +-
man/posnegbinUC.Rd | 3 +-
man/posnegbinomial.Rd | 49 +-
man/posnormUC.Rd | 3 +-
man/posnormal1.Rd | 15 +-
man/pospoisUC.Rd | 10 +-
man/pospoisson.Rd | 19 +-
man/powl.Rd | 5 +-
man/predict.qrrvglm.Rd | 16 +-
man/predict.vglm.Rd | 6 +-
man/prentice74.Rd | 36 +-
man/probit.Rd | 3 +-
man/propodds.Rd | 99 +
man/prplot.Rd | 89 +
man/qrrvglm.control.Rd | 74 +-
man/qtplot.gumbel.Rd | 2 +-
man/qtplot.lmscreg.Rd | 2 +-
man/rcqo.Rd | 39 -
man/recexp1.Rd | 2 +-
man/reciprocal.Rd | 1 +
man/recnormal1.Rd | 2 +-
man/rhobit.Rd | 1 +
man/riceff.Rd | 6 +-
man/rig.Rd | 8 +-
man/rlplot.egev.Rd | 2 +-
man/rrvglm.control.Rd | 4 +-
man/s.Rd | 60 +-
man/simplex.Rd | 3 +-
man/sinmad.Rd | 6 +-
man/skellam.Rd | 16 +-
man/skellamUC.Rd | 2 +-
man/skewnormal1.Rd | 21 +-
man/slash.Rd | 4 +-
man/slashUC.Rd | 13 +-
man/smartpred.Rd | 2 +-
man/snormUC.Rd | 2 +-
man/sratio.Rd | 18 +-
man/studentt.Rd | 9 +-
man/tikuv.Rd | 3 +-
man/tobit.Rd | 28 +-
man/trplot.qrrvglm.Rd | 8 +-
man/undocumented-methods.Rd | 2 +
man/uqo.Rd | 6 +-
man/uqo.control.Rd | 2 +-
man/vgam.Rd | 9 +-
man/vgam.control.Rd | 51 +-
man/vglm.Rd | 10 +-
man/vglm.control.Rd | 12 +
man/vonmises.Rd | 10 +-
man/vsmooth.spline.Rd | 59 +-
man/wald.Rd | 8 +-
man/weibull.Rd | 4 +-
man/wffc.P2star.Rd | 7 +-
man/wffc.Rd | 27 +-
man/wffc.indiv.Rd | 5 +-
man/wffc.nc.Rd | 10 +-
man/wffc.teams.Rd | 9 +-
man/yeo.johnson.Rd | 22 +-
man/yulesimon.Rd | 8 +-
man/zanegbinUC.Rd | 13 +-
man/zanegbinomial.Rd | 20 +-
man/zapoisUC.Rd | 16 +-
man/zapoisson.Rd | 24 +-
man/zero.Rd | 4 +-
man/zeta.Rd | 32 +-
man/zetaUC.Rd | 6 +-
man/zetaff.Rd | 34 +-
man/zibinomUC.Rd | 7 +-
man/zibinomial.Rd | 8 +-
man/zinegbinUC.Rd | 7 +-
man/zinegbinomial.Rd | 31 +-
man/zipebcom.Rd | 14 +-
man/zipf.Rd | 9 +-
man/zipfUC.Rd | 7 +-
man/zipoisUC.Rd | 11 +-
man/zipoisson.Rd | 46 +-
src/cqof.f | 449 +--
src/fgam.f | 15 +-
src/lms.f | 2 +
src/rgam.f | 5 +-
src/tyeepolygamma.f | 12 +-
src/vmux.f | 3 +-
src/zeta.f | 138 -
src/zeta4.c | 258 ++
338 files changed, 16912 insertions(+), 8742 deletions(-)
diff --cc debian/changelog
index 4b10dd7,0000000..2075787
mode 100644,000000..100644
--- a/debian/changelog
+++ b/debian/changelog
@@@ -1,73 -1,0 +1,79 @@@
++r-cran-vgam (0.7-10-1) unstable; urgency=low
++
++ * New upstream release.
++
++ -- Chris Lawrence <lawrencc at debian.org> Tue, 30 Mar 2010 21:21:11 -0500
++
+r-cran-vgam (0.7-9-1) unstable; urgency=low
+
+ * New upstream release.
+ * Update debian/watch.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 10 Jul 2009 21:27:58 -0500
+
+r-cran-vgam (0.7-8-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 16 Mar 2009 22:22:19 -0500
+
+r-cran-vgam (0.7-7-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 29 May 2008 06:51:02 -0500
+
+r-cran-vgam (0.7-6-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 29 Mar 2008 02:04:58 -0500
+
+r-cran-vgam (0.7-5-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 06 Dec 2007 19:19:56 -0600
+
+r-cran-vgam (0.7-4-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 07 Oct 2007 20:16:15 -0500
+
+r-cran-vgam (0.7-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 14 Jun 2007 14:04:29 -0500
+
+r-cran-vgam (0.7-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 4 Feb 2007 15:28:54 -0600
+
+r-cran-vgam (0.7-1-1) unstable; urgency=low
+
+ * New upstream release.
+ * First upload to unstable, since VGAM is now GPL'd (yeay!).
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 26 Oct 2006 22:05:10 -0500
+
+r-other-yee-vgam (0.6-9-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 8 Jun 2006 20:39:52 -0400
+
+r-other-yee-vgam (0.6-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 9 Jul 2005 02:42:23 -0500
+
+r-other-yee-vgam (0.5-19-1) unstable; urgency=low
+
+ * Initial Debian Release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 19 Apr 2004 19:12:44 -0500
diff --cc debian/control
index e81a292,0000000..f758c71
mode 100644,000000..100644
--- a/debian/control
+++ b/debian/control
@@@ -1,24 -1,0 +1,24 @@@
+Source: r-cran-vgam
+Section: gnu-r
+Priority: optional
+Maintainer: Chris Lawrence <lawrencc at debian.org>
+Build-Depends: debhelper (>> 7), r-base-dev (>> 2.4.0), cdbs
- Standards-Version: 3.8.2
++Standards-Version: 3.8.4
+Homepage: http://www.stat.auckland.ac.nz/~yee/VGAM/
+
+Package: r-cran-vgam
+Architecture: any
+Depends: r-base-core (>= 2.4.0), ${shlibs:Depends}, ${misc:Depends}
+Enhances: r-cran-zelig
+Description: GNU R package for estimating vector generalized additive models
+ This package implements a variety of functions for estimating vector
+ generalized additive models (VGAMs), as well as vector generalized
+ linear models (VGLMs), reduced-rank VGLMs, and quadratic reduced-rank
+ VGLMs.
+ .
+ Specific models that can be fit include a wide variety of
+ categorical-response models (with nominal and ordinal dependent
+ variables), bivariate binary-response models (bivariate
+ logit/probit), and seemingly-unrelated regressions. The package also
+ includes a number of standard and non-standard distribution functions
+ of use to statisticians.
diff --cc debian/source/format
index 0000000,0000000..163aaf8
new file mode 100644
--- /dev/null
+++ b/debian/source/format
@@@ -1,0 -1,0 +1,1 @@@
++3.0 (quilt)
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/r-cran-vgam.git
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