[r-cran-vgam] 28/63: Import Debian patch 0.8-6-1
Andreas Tille
tille at debian.org
Tue Jan 24 13:54:29 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository r-cran-vgam.
commit b8ca32ecae5c7468c086dd55e0cbfe04e11d2259
Merge: f22778a 24177ca
Author: Chris Lawrence <lawrencc at debian.org>
Date: Thu Mar 22 13:44:59 2012 -0400
Import Debian patch 0.8-6-1
BUGS | 9 +
DESCRIPTION | 22 +-
MD5 | 569 +--
NAMESPACE | 210 +-
NEWS | 77 +
R/aamethods.q | 124 +-
R/add1.vglm.q | 2 +-
R/attrassign.R | 2 +-
R/bAIC.q | 89 +-
R/build.terms.vlm.q | 2 +-
R/calibrate.q | 31 +-
R/cao.R | 4 +-
R/cao.fit.q | 373 +-
R/coef.vlm.q | 8 +-
R/cqo.R | 4 +-
R/cqo.fit.q | 48 +-
R/deviance.vlm.q | 2 +-
R/effects.vglm.q | 2 +-
R/family.aunivariate.R | 63 +-
R/family.basics.R | 58 +-
R/family.binomial.R | 518 +-
R/family.bivariate.R | 302 +-
R/family.categorical.R | 365 +-
R/family.censored.R | 40 +-
R/family.circular.R | 10 +-
R/family.exp.R | 36 +-
R/family.extremes.R | 470 +-
R/family.fishing.R | 10 +-
R/family.functions.R | 2 +-
R/family.genetic.R | 649 +--
R/family.glmgam.R | 551 ++-
R/family.loglin.R | 14 +-
R/family.math.R | 2 +-
R/family.mixture.R | 105 +-
R/family.nonlinear.R | 220 +-
R/family.normal.R | 508 +-
R/family.others.R | 92 +-
R/family.positive.R | 815 ++--
R/family.qreg.R | 516 +-
R/family.quantal.R | 41 +-
R/family.rcam.R | 189 +-
R/family.rcqo.R | 107 +-
R/family.robust.R | 256 +-
R/family.rrr.R | 423 +-
R/family.survival.R | 66 +-
R/family.ts.R | 400 +-
R/family.univariate.R | 5114 +++++++++++---------
R/family.vglm.R | 6 +-
R/family.zeroinf.R | 4887 ++++++++++++-------
R/fittedvlm.R | 6 +-
R/formula.vlm.q | 35 +-
R/generic.q | 2 +-
R/links.q | 159 +-
R/logLik.vlm.q | 8 +-
R/lrwaldtest.R | 597 +++
R/model.matrix.vglm.q | 11 +-
R/mux.q | 2 +-
R/nobs.R | 28 +-
R/plot.vglm.q | 123 +-
R/predict.vgam.q | 4 +-
R/predict.vglm.q | 2 +-
R/predict.vlm.q | 24 +-
R/print.vglm.q | 259 +-
R/print.vlm.q | 119 +-
R/qrrvglm.control.q | 81 +-
R/qtplot.q | 100 +-
R/residuals.vlm.q | 10 +-
R/rrvglm.R | 4 +-
R/rrvglm.control.q | 112 +-
R/rrvglm.fit.q | 20 +-
R/s.q | 2 +-
R/s.vam.q | 2 +-
R/smart.R | 2 +-
R/step.vglm.q | 2 +-
R/summary.vgam.q | 31 +-
R/summary.vglm.q | 47 +-
R/summary.vlm.q | 192 +-
R/uqo.R | 304 +-
R/vgam.R | 18 +-
R/vgam.control.q | 39 +-
R/vgam.fit.q | 34 +-
R/vgam.match.q | 2 +-
R/vglm.R | 2 +-
R/vglm.control.q | 16 +-
R/vglm.fit.q | 32 +-
R/vlm.R | 9 +-
R/vlm.wfit.q | 96 +-
R/vsmooth.spline.q | 73 +-
R/zzz.R | 2 +-
data/alclevels.rda | Bin 561 -> 561 bytes
data/alcoff.rda | Bin 557 -> 558 bytes
data/auuc.rda | Bin 243 -> 243 bytes
data/azprocedure.rda | Bin 18476 -> 0 bytes
data/backPain.rda | Bin 602 -> 469 bytes
data/backPain.txt.gz | Bin 463 -> 451 bytes
data/bmi.nz.txt.xz | Bin 0 -> 5256 bytes
data/bminz.txt.gz | Bin 6259 -> 0 bytes
data/car.all.rda | Bin 8214 -> 6944 bytes
data/chest.nz.txt.bz2 | Bin 0 -> 484 bytes
data/chestnz.txt.gz | Bin 559 -> 0 bytes
data/{nzc.txt.gz => chinese.nz.txt.gz} | Bin
data/crashbc.rda | Bin 387 -> 388 bytes
data/crashf.rda | Bin 353 -> 355 bytes
data/crashi.rda | Bin 503 -> 501 bytes
data/crashmc.rda | Bin 397 -> 397 bytes
data/crashp.rda | Bin 391 -> 389 bytes
data/crashtr.rda | Bin 375 -> 375 bytes
data/crime.us.rda | Bin 0 -> 3977 bytes
data/datalist | 47 +
data/fibre15.rda | Bin 245 -> 245 bytes
data/fibre1dot5.rda | Bin 296 -> 295 bytes
data/finney44.rda | Bin 208 -> 207 bytes
data/gala.rda | Bin 1045 -> 1050 bytes
data/gew.txt.gz | Bin 531 -> 530 bytes
data/grain.us.txt.bz2 | Bin 0 -> 883 bytes
data/hspider.rda | Bin 1311 -> 1343 bytes
data/hued.rda | Bin 410 -> 410 bytes
data/huie.rda | Bin 417 -> 416 bytes
data/hunua.txt.bz2 | Bin 0 -> 1413 bytes
data/hunua.txt.gz | Bin 1894 -> 0 bytes
data/huse.rda | Bin 322 -> 321 bytes
data/leukemia.rda | Bin 327 -> 327 bytes
data/marital.nz.rda | Bin 0 -> 10424 bytes
data/mmt.rda | Bin 5973 -> 4223 bytes
data/nzmarital.rda | Bin 25309 -> 0 bytes
data/pneumo.rda | Bin 263 -> 263 bytes
data/rainfall.rda | Bin 17147 -> 11062 bytes
data/ruge.rda | Bin 255 -> 255 bytes
data/toxop.rda | Bin 465 -> 472 bytes
data/ugss.rda | Bin 15160 -> 11609 bytes
data/uscrime.rda | Bin 3967 -> 0 bytes
data/usgrain.txt.gz | Bin 1077 -> 0 bytes
data/venice.rda | Bin 1210 -> 988 bytes
data/venice90.rda | Bin 13037 -> 8056 bytes
data/waitakere.txt.bz2 | Bin 0 -> 2253 bytes
data/waitakere.txt.gz | Bin 3090 -> 0 bytes
data/wffc.indiv.rda | Bin 2867 -> 2567 bytes
data/wffc.nc.rda | Bin 5671 -> 4265 bytes
data/wffc.rda | Bin 13564 -> 10245 bytes
data/wffc.teams.rda | Bin 541 -> 540 bytes
data/xs.nz.rda | Bin 0 -> 221352 bytes
debian/changelog | 7 +
debian/control | 6 +-
inst/doc/categoricalVGAM.Rnw | 18 +-
inst/doc/categoricalVGAM.pdf | Bin 678455 -> 677826 bytes
inst/doc/jss.bst | 1647 -------
inst/doc/jss.cls | 473 --
man/ABO.Rd | 13 +-
man/BratUC.Rd | 96 -
man/Inv.gaussian.Rd | 2 +-
man/Qvar.Rd | 32 +-
man/SurvS4-class.Rd | 13 +-
man/SurvS4.Rd | 104 +-
man/VGAM-package.Rd | 16 +-
man/alaplace3.Rd | 4 +-
man/amlnormal.Rd | 32 +-
man/benfUC.Rd | 20 +-
man/benini.Rd | 3 +-
man/beniniUC.Rd | 2 +-
man/beta.ab.Rd | 20 +-
man/betaII.Rd | 28 +-
man/betabinomial.ab.Rd | 12 +-
man/bilogistic4.Rd | 16 +-
man/binom2.or.Rd | 54 +-
man/binomialff.Rd | 4 +-
man/bivgamma.mckay.Rd | 2 +-
man/{bminz.Rd => bmi.nz.Rd} | 26 +-
man/brat.Rd | 152 +-
man/bratUC.Rd | 100 +
man/bratt.Rd | 162 +-
man/calibrate.qrrvglm.Rd | 41 +-
man/calibrate.qrrvglm.control.Rd | 5 +-
man/cdf.lmscreg.Rd | 2 +-
man/cenpoisson.Rd | 28 +-
man/{chestnz.Rd => chest.nz.Rd} | 19 +-
man/{nzc.Rd => chinese.nz.Rd} | 10 +-
man/cqo.Rd | 72 +-
man/{uscrime.Rd => crime.us.Rd} | 14 +-
man/cumulative.Rd | 59 +-
man/dagum.Rd | 18 +-
man/{DagumUC.Rd => dagumUC.Rd} | 27 +-
man/deplot.lmscreg.Rd | 2 +-
man/eunifUC.Rd | 7 +-
man/exppoisson.Rd | 9 +-
man/fgm.Rd | 11 +-
man/fgmUC.Rd | 16 +-
man/fisk.Rd | 20 +-
man/{FiskUC.Rd => fiskUC.Rd} | 29 +-
man/fittedvlm.Rd | 4 +-
man/frechet.Rd | 2 +-
man/frechetUC.Rd | 2 +-
man/garma.Rd | 69 +-
man/genbetaII.Rd | 46 +-
man/gengamma.Rd | 2 +-
man/genpoisson.Rd | 4 +-
man/geometric.Rd | 28 +-
man/golf.Rd | 62 +-
man/gpd.Rd | 25 +-
man/{usgrain.Rd => grain.us.Rd} | 8 +-
man/grc.Rd | 56 +-
man/gumbelIbiv.Rd | 8 +-
man/gumbelUC.Rd | 2 +-
man/hyperg.Rd | 41 +-
man/hzetaUC.Rd | 2 +-
man/iam.Rd | 21 +-
man/inv.gaussianff.Rd | 17 +-
man/invlomax.Rd | 34 +-
man/{InvlomaxUC.Rd => invlomaxUC.Rd} | 29 +-
man/invparalogistic.Rd | 32 +-
man/{InvparalogisticUC.Rd => invparalogisticUC.Rd} | 30 +-
man/lms.bcg.Rd | 10 +-
man/lms.bcn.Rd | 27 +-
man/lms.yjn.Rd | 6 +-
man/loge.Rd | 2 +-
man/logistic.Rd | 2 +-
man/loglaplace.Rd | 71 +-
man/loglog.Rd | 16 +-
man/lognormal.Rd | 2 +-
man/lomax.Rd | 26 +-
man/{LomaxUC.Rd => lomaxUC.Rd} | 25 +-
man/lrtest.Rd | 167 +
man/margeff.Rd | 14 +-
man/{nzmarital.Rd => marital.nz.Rd} | 30 +-
man/maxwell.Rd | 18 +-
man/maxwellUC.Rd | 3 +-
man/mbinomial.Rd | 75 +-
man/mccullagh89.Rd | 6 +-
man/mix2exp.Rd | 42 +-
man/mix2normal1.Rd | 7 +-
man/morgenstern.Rd | 12 +-
man/multinomial.Rd | 121 +-
man/nbcanlink.Rd | 174 +
man/nbolf.Rd | 9 +-
man/negbinomial.Rd | 58 +-
man/negbinomial.size.Rd | 134 +
man/normal1.Rd | 46 +-
man/notdocumentedyet.Rd | 98 +-
man/olympic.Rd | 2 +-
man/ordpoisson.Rd | 2 +-
man/paralogistic.Rd | 22 +-
man/{ParalogisticUC.Rd => paralogisticUC.Rd} | 26 +-
man/pareto1.Rd | 39 +-
man/paretoIV.Rd | 36 +-
man/{ParetoIVUC.Rd => paretoIVUC.Rd} | 0
man/plotdeplot.lmscreg.Rd | 2 +-
man/plotqtplot.lmscreg.Rd | 2 +-
man/plotvgam.Rd | 69 +-
man/plotvgam.control.Rd | 8 +-
man/polf.Rd | 52 +-
man/posgeomUC.Rd | 107 +
man/posnegbinomial.Rd | 69 +-
man/pospoisUC.Rd | 7 +-
man/pospoisson.Rd | 49 +-
man/propodds.Rd | 2 +-
man/qrrvglm.control.Rd | 31 +-
man/qtplot.lmscreg.Rd | 2 +-
man/{RayleighUC.Rd => rayleighUC.Rd} | 0
man/rrar.Rd | 63 +-
man/rrvglm.Rd | 4 +-
man/sinmad.Rd | 35 +-
man/{SinmadUC.Rd => sinmadUC.Rd} | 18 +-
man/toxop.Rd | 10 +-
man/tparetoUC.Rd | 9 +-
man/trplot.qrrvglm.Rd | 16 +-
man/ugss.Rd | 6 +-
man/undocumented-methods.Rd | 60 +-
man/uqo.Rd | 64 +-
man/uqo.control.Rd | 14 +-
man/vgam-class.Rd | 3 +
man/vgam.Rd | 76 +-
man/vgam.control.Rd | 35 +-
man/vglm.Rd | 76 +-
man/vglm.control.Rd | 140 +-
man/vonmises.Rd | 11 +-
man/weibull.Rd | 2 +-
man/weightsvglm.Rd | 2 +-
man/xs.nz.Rd | 420 ++
man/yip88.Rd | 2 +-
man/zabinomUC.Rd | 81 +
man/zabinomial.Rd | 135 +
man/zageomUC.Rd | 81 +
man/zageometric.Rd | 142 +
man/zanegbinUC.Rd | 37 +-
man/zanegbinomial.Rd | 80 +-
man/zapoisUC.Rd | 36 +-
man/zapoisson.Rd | 113 +-
man/zero.Rd | 2 +-
man/zibinomUC.Rd | 48 +-
man/zibinomial.Rd | 59 +-
man/zigeomUC.Rd | 33 +-
man/zigeometric.Rd | 55 +-
man/zinegbinUC.Rd | 65 +-
man/zinegbinomial.Rd | 77 +-
man/zipf.Rd | 52 +-
man/zipoisUC.Rd | 62 +-
man/zipoisson.Rd | 87 +-
src/caqo3.c | 133 +-
src/gautr.c | 2 +-
src/lms.f | 6 +-
src/muxr.c | 72 +-
src/rgam3.c | 13 +
src/vgam3.c | 4 +-
src/vmux3.c | 30 +-
303 files changed, 16807 insertions(+), 12540 deletions(-)
diff --cc debian/changelog
index 1b2bc1a,0000000..7f131f6
mode 100644,000000..100644
--- a/debian/changelog
+++ b/debian/changelog
@@@ -1,103 -1,0 +1,110 @@@
++r-cran-vgam (0.8-6-1) unstable; urgency=low
++
++ * New upstream release; fixes FTBFS. (Closes: #665250)
++ + Upstream now requires R >= 2.14; build dependencies updated accordingly.
++
++ -- Chris Lawrence <lawrencc at debian.org> Thu, 22 Mar 2012 13:44:59 -0400
++
+r-cran-vgam (0.8-4-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 04 Nov 2011 13:13:06 -0400
+
+r-cran-vgam (0.8-3-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 17 Jul 2011 16:20:26 -0500
+
+r-cran-vgam (0.8-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 20 Feb 2011 15:37:31 -0600
+
+r-cran-vgam (0.8-1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 07 Jul 2010 03:44:27 -0500
+
+r-cran-vgam (0.7-10-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 30 Mar 2010 21:21:11 -0500
+
+r-cran-vgam (0.7-9-1) unstable; urgency=low
+
+ * New upstream release.
+ * Update debian/watch.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 10 Jul 2009 21:27:58 -0500
+
+r-cran-vgam (0.7-8-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 16 Mar 2009 22:22:19 -0500
+
+r-cran-vgam (0.7-7-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 29 May 2008 06:51:02 -0500
+
+r-cran-vgam (0.7-6-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 29 Mar 2008 02:04:58 -0500
+
+r-cran-vgam (0.7-5-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 06 Dec 2007 19:19:56 -0600
+
+r-cran-vgam (0.7-4-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 07 Oct 2007 20:16:15 -0500
+
+r-cran-vgam (0.7-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 14 Jun 2007 14:04:29 -0500
+
+r-cran-vgam (0.7-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 4 Feb 2007 15:28:54 -0600
+
+r-cran-vgam (0.7-1-1) unstable; urgency=low
+
+ * New upstream release.
+ * First upload to unstable, since VGAM is now GPL'd (yeay!).
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 26 Oct 2006 22:05:10 -0500
+
+r-other-yee-vgam (0.6-9-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 8 Jun 2006 20:39:52 -0400
+
+r-other-yee-vgam (0.6-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 9 Jul 2005 02:42:23 -0500
+
+r-other-yee-vgam (0.5-19-1) unstable; urgency=low
+
+ * Initial Debian Release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 19 Apr 2004 19:12:44 -0500
diff --cc debian/control
index 386ed18,0000000..97b0c1b
mode 100644,000000..100644
--- a/debian/control
+++ b/debian/control
@@@ -1,24 -1,0 +1,24 @@@
+Source: r-cran-vgam
+Section: gnu-r
+Priority: optional
+Maintainer: Chris Lawrence <lawrencc at debian.org>
- Build-Depends: debhelper (>> 7), r-base-dev (>= 2.10), cdbs
- Standards-Version: 3.9.2
++Build-Depends: debhelper (>> 7), r-base-dev (>= 2.14), cdbs
++Standards-Version: 3.9.3
+Homepage: http://www.stat.auckland.ac.nz/~yee/VGAM/
+
+Package: r-cran-vgam
+Architecture: any
- Depends: r-base-core (>= 2.10), ${shlibs:Depends}, ${misc:Depends}
++Depends: r-base-core (>= 2.14), ${shlibs:Depends}, ${misc:Depends}
+Enhances: r-cran-zelig
+Description: GNU R package for estimating vector generalized additive models
+ This package implements a variety of functions for estimating vector
+ generalized additive models (VGAMs), as well as vector generalized
+ linear models (VGLMs), reduced-rank VGLMs, and quadratic reduced-rank
+ VGLMs.
+ .
+ Specific models that can be fit include a wide variety of
+ categorical-response models (with nominal and ordinal dependent
+ variables), bivariate binary-response models (bivariate
+ logit/probit), and seemingly-unrelated regressions. The package also
+ includes a number of standard and non-standard distribution functions
+ of use to statisticians.
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/r-cran-vgam.git
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