[r-cran-vgam] 34/63: Import Debian patch 0.9-1-1
Andreas Tille
tille at debian.org
Tue Jan 24 13:54:33 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository r-cran-vgam.
commit 8783b60caa68e7ea7b3190f9a0a7d8fd31af58b0
Merge: ee27b0d d323296
Author: Chris Lawrence <lawrencc at debian.org>
Date: Sat Apr 27 21:40:01 2013 -0400
Import Debian patch 0.9-1-1
BUGS | 16 +
DESCRIPTION | 11 +-
MD5 | 659 ++--
NAMESPACE | 41 +-
NEWS | 92 +
R/Links.R | 2 +-
R/aamethods.q | 2 +-
R/add1.vglm.q | 2 +-
R/attrassign.R | 2 +-
R/bAIC.q | 2 +-
R/build.terms.vlm.q | 2 +-
R/calibrate.q | 2 +-
R/cao.R | 2 +-
R/cao.fit.q | 1682 ++++-----
R/coef.vlm.q | 31 +-
R/cqo.R | 2 +-
R/cqo.fit.q | 597 ++--
R/deviance.vlm.q | 20 +-
R/effects.vglm.q | 19 +-
R/family.actuary.R | 2435 +++++++++++--
R/family.aunivariate.R | 907 +++--
R/family.basics.R | 704 ++--
R/family.binomial.R | 2306 +++++++-----
R/family.bivariate.R | 1791 +++++-----
R/family.categorical.R | 1686 ++++-----
R/family.censored.R | 1041 ++++--
R/family.circular.R | 208 +-
R/family.exp.R | 190 +-
R/family.extremes.R | 1839 +++++-----
R/family.fishing.R | 126 +-
R/family.functions.R | 328 +-
R/family.genetic.R | 605 ++--
R/family.glmgam.R | 925 ++---
R/family.loglin.R | 131 +-
R/family.math.R | 75 +-
R/family.mixture.R | 490 ++-
R/family.nonlinear.R | 42 +-
R/family.normal.R | 1849 ++++++----
R/family.others.R | 370 +-
R/family.positive.R | 2042 +++++++----
R/family.qreg.R | 2839 +++++++--------
R/family.quantal.R | 264 +-
R/family.rcim.R | 319 +-
R/family.rcqo.R | 288 +-
R/family.robust.R | 37 +-
R/family.rrr.R | 2808 ++++++++-------
R/family.sur.R | 442 +++
R/family.survival.R | 366 +-
R/family.ts.R | 534 +--
R/family.univariate.R | 5998 +++++++++++---------------------
R/family.vglm.R | 2 +-
R/family.zeroinf.R | 1908 +++++-----
R/fittedvlm.R | 2 +-
R/formula.vlm.q | 2 +-
R/generic.q | 2 +-
R/links.q | 101 +-
R/logLik.vlm.q | 30 +-
R/lrwaldtest.R | 30 +-
R/model.matrix.vglm.q | 427 +--
R/mux.q | 368 +-
R/nobs.R | 37 +-
R/plot.vglm.q | 1179 ++++---
R/predict.vgam.q | 525 +--
R/predict.vglm.q | 272 +-
R/predict.vlm.q | 491 +--
R/print.vglm.q | 15 +-
R/print.vlm.q | 2 +-
R/qrrvglm.control.q | 23 +-
R/qtplot.q | 2 +-
R/residuals.vlm.q | 379 +-
R/rrvglm.R | 2 +-
R/rrvglm.control.q | 252 +-
R/rrvglm.fit.q | 298 +-
R/s.q | 6 +-
R/s.vam.q | 409 ++-
R/smart.R | 2 +-
R/step.vglm.q | 9 +-
R/summary.vgam.q | 101 +-
R/summary.vglm.q | 77 +-
R/summary.vlm.q | 149 +-
R/uqo.R | 104 +-
R/vgam.R | 406 ++-
R/vgam.control.q | 4 +-
R/vgam.fit.q | 491 +--
R/vgam.match.q | 125 +-
R/vglm.R | 60 +-
R/vglm.control.q | 107 +-
R/vglm.fit.q | 145 +-
R/vlm.R | 215 +-
R/vlm.wfit.q | 211 +-
R/vsmooth.spline.q | 801 ++---
R/zzz.R | 13 -
data/Huggins89.t1.rda | Bin 0 -> 439 bytes
data/Perom.rda | Bin 0 -> 431 bytes
data/alclevels.rda | Bin 551 -> 549 bytes
data/alcoff.rda | Bin 546 -> 546 bytes
data/auuc.rda | Bin 246 -> 243 bytes
data/backPain.rda | Bin 484 -> 480 bytes
data/car.all.rda | Bin 6961 -> 6987 bytes
data/chinese.nz.txt.gz | Bin 365 -> 380 bytes
data/crashbc.rda | Bin 375 -> 373 bytes
data/crashf.rda | Bin 341 -> 339 bytes
data/crashi.rda | Bin 491 -> 489 bytes
data/crashmc.rda | Bin 386 -> 383 bytes
data/crashp.rda | Bin 376 -> 375 bytes
data/crashtr.rda | Bin 362 -> 360 bytes
data/crime.us.rda | Bin 3976 -> 0 bytes
data/datalist | 49 -
data/fibre15.rda | Bin 247 -> 0 bytes
data/fibre1dot5.rda | Bin 298 -> 0 bytes
data/finney44.rda | Bin 210 -> 207 bytes
data/gala.rda | Bin 1052 -> 0 bytes
data/gew.txt.gz | Bin 530 -> 544 bytes
data/hspider.rda | Bin 1344 -> 1343 bytes
data/hued.rda | Bin 415 -> 0 bytes
data/huie.rda | Bin 419 -> 0 bytes
data/huse.rda | Bin 324 -> 0 bytes
data/leukemia.rda | Bin 329 -> 328 bytes
data/marital.nz.rda | Bin 10504 -> 10480 bytes
data/mmt.rda | Bin 4222 -> 4205 bytes
data/{olympic.txt.gz => olym08.txt.gz} | Bin 941 -> 943 bytes
data/olym12.txt.gz | Bin 0 -> 922 bytes
data/pneumo.rda | Bin 268 -> 266 bytes
data/rainfall.rda | Bin 11062 -> 0 bytes
data/ruge.rda | Bin 258 -> 255 bytes
data/toxop.rda | Bin 474 -> 481 bytes
data/ugss.rda | Bin 11588 -> 0 bytes
data/venice.rda | Bin 983 -> 971 bytes
data/venice90.rda | Bin 8068 -> 8220 bytes
data/wffc.indiv.rda | Bin 2565 -> 2590 bytes
data/wffc.nc.rda | Bin 4292 -> 4247 bytes
data/wffc.rda | Bin 10236 -> 10202 bytes
data/wffc.teams.rda | Bin 542 -> 540 bytes
data/xs.nz.rda | Bin 221524 -> 0 bytes
debian/changelog | 6 +
debian/rules | 9 +
inst/CITATION | 21 +
inst/doc/categoricalVGAM.R | 396 +++
inst/doc/categoricalVGAM.pdf | Bin 678663 -> 677107 bytes
man/AA.Aa.aa.Rd | 25 +-
man/AB.Ab.aB.ab.Rd | 42 +-
man/AB.Ab.aB.ab2.Rd | 49 +-
man/ABO.Rd | 10 +-
man/AICvlm.Rd | 20 +-
man/Coef.Rd | 11 +-
man/Coef.qrrvglm-class.Rd | 30 +-
man/Coef.qrrvglm.Rd | 38 +-
man/Coef.rrvglm-class.Rd | 20 +-
man/Coef.rrvglm.Rd | 13 +-
man/Coef.vlm.Rd | 25 +-
man/CommonVGAMffArguments.Rd | 40 +-
man/DeLury.Rd | 65 +-
man/G1G2G3.Rd | 49 +-
man/Huggins89.t1.Rd | 110 +
man/Opt.Rd | 22 +-
man/Perom.Rd | 75 +
man/Qvar.Rd | 47 +-
man/SUR.Rd | 192 +
man/VGAM-package.Rd | 95 +-
man/alaplace3.Rd | 78 +-
man/alaplaceUC.Rd | 4 +-
man/amlbinomial.Rd | 32 +-
man/amlexponential.Rd | 14 +-
man/amlnormal.Rd | 61 +-
man/amlpoisson.Rd | 14 +-
man/auuc.Rd | 8 +
man/backPain.Rd | 2 +
man/beta.ab.Rd | 30 +-
man/betaII.Rd | 10 +-
man/betabinomUC.Rd | 24 +-
man/betabinomial.Rd | 56 +-
man/betabinomial.ab.Rd | 22 +-
man/betageometric.Rd | 6 +-
man/bilogis4UC.Rd | 24 +-
man/binom2.or.Rd | 25 +-
man/binom2.orUC.Rd | 46 +-
man/binom2.rho.Rd | 95 +-
man/binom2.rhoUC.Rd | 29 +-
man/binomialff.Rd | 39 +-
man/binormal.Rd | 26 +-
man/bisa.Rd | 4 +
man/bisaUC.Rd | 51 +-
man/bivgamma.mckay.Rd | 17 +-
man/bmi.nz.Rd | 2 +-
man/borel.tanner.Rd | 4 +-
man/calibrate.Rd | 47 +-
man/calibrate.qrrvglm.Rd | 47 +-
man/calibrate.qrrvglm.control.Rd | 16 +-
man/cao.Rd | 44 +-
man/cao.control.Rd | 68 +-
man/cardioid.Rd | 2 +
man/cenpoisson.Rd | 58 +-
man/cgumbel.Rd | 40 +-
man/chest.nz.Rd | 6 +-
man/chinese.nz.Rd | 35 +-
man/constraints.Rd | 11 +-
man/cqo.Rd | 29 +-
man/crashes.Rd | 12 +-
man/cratio.Rd | 55 +-
man/crime.us.Rd | 81 -
man/cumulative.Rd | 12 +-
man/dagum.Rd | 9 +-
man/dagumUC.Rd | 42 +-
man/dcennormal1.Rd | 20 +-
man/deplot.lmscreg.Rd | 37 +-
man/depvar.Rd | 8 +-
man/eexpUC.Rd | 47 +-
man/enormUC.Rd | 34 +-
man/enzyme.Rd | 6 +-
man/eunifUC.Rd | 38 +-
man/expexp.Rd | 12 +-
man/fgm.Rd | 34 +-
man/fill.Rd | 90 +-
man/fisherz.Rd | 13 +-
man/fisk.Rd | 2 +-
man/fiskUC.Rd | 4 +-
man/fittedvlm.Rd | 10 +-
man/fnormal1.Rd | 4 +
man/frechet.Rd | 4 +-
man/frechetUC.Rd | 18 +-
man/freund61.Rd | 12 +-
man/gamma2.Rd | 6 +-
man/gaussianff.Rd | 10 +-
man/genbetaII.Rd | 4 +-
man/geometric.Rd | 77 +-
man/gev.Rd | 13 +-
man/gevUC.Rd | 5 +-
man/gew.Rd | 92 +-
man/golf.Rd | 24 +-
man/gpdUC.Rd | 6 +-
man/grain.us.Rd | 8 +-
man/grc.Rd | 29 +-
man/hormone.Rd | 69 +-
man/huber.Rd | 18 +-
man/huberUC.Rd | 11 +-
man/hued.Rd | 55 -
man/huggins91.Rd | 182 -
man/huggins91UC.Rd | 141 -
man/huie.Rd | 59 -
man/hunua.Rd | 22 +-
man/huse.Rd | 73 -
man/inv.gaussianff.Rd | 4 +-
man/invbinomial.Rd | 2 +-
man/invlomax.Rd | 2 +-
man/invlomaxUC.Rd | 4 +-
man/invparalogistic.Rd | 2 +-
man/invparalogisticUC.Rd | 4 +-
man/is.parallel.Rd | 5 +-
man/is.zero.Rd | 3 +-
man/lambertW.Rd | 7 +-
man/{lv.Rd => latvar.Rd} | 37 +-
man/leipnik.Rd | 4 +-
man/lirat.Rd | 2 +-
man/lms.bcn.Rd | 10 +-
man/loge.Rd | 5 +-
man/logit.Rd | 4 +-
man/loglinb2.Rd | 10 +-
man/loglinb3.Rd | 5 +
man/lomax.Rd | 32 +-
man/lomaxUC.Rd | 32 +-
man/lvplot.qrrvglm.Rd | 73 +-
man/makeham.Rd | 9 +-
man/maxwellUC.Rd | 9 +-
man/mlogit.Rd | 14 +-
man/multinomial.Rd | 35 +-
man/nbcanlink.Rd | 6 +-
man/nbolf.Rd | 13 +-
man/negbinomial.Rd | 8 +-
man/negbinomial.size.Rd | 6 +-
man/normal1.Rd | 22 +-
man/notdocumentedyet.Rd | 51 +-
man/olym.Rd | 79 +
man/olympic.Rd | 56 -
man/oxtemp.Rd | 2 +-
man/paralogistic.Rd | 3 +-
man/paralogisticUC.Rd | 2 +-
man/pareto1.Rd | 7 +-
man/paretoIV.Rd | 2 +-
man/paretoIVUC.Rd | 5 +-
man/perks.Rd | 6 +
man/perksUC.Rd | 1 +
man/persp.qrrvglm.Rd | 4 +-
man/pgamma.deriv.Rd | 128 +
man/pgamma.deriv.unscaled.Rd | 102 +
man/plackett.Rd | 4 +-
man/plotvgam.Rd | 6 +-
man/pneumo.Rd | 8 +-
man/pnorm2UC.Rd | 124 +
man/poissonff.Rd | 21 +-
man/polf.Rd | 11 +-
man/posbernUC.Rd | 168 +
man/posbernoulli.b.Rd | 209 ++
man/posbernoulli.t.Rd | 216 ++
man/posbernoulli.tb.Rd | 217 ++
man/posbinomUC.Rd | 11 +-
man/posbinomial.Rd | 56 +-
man/qrrvglm.control.Rd | 27 +-
man/rcqo.Rd | 1 +
man/rrar.Rd | 18 +-
man/rrvglm-class.Rd | 9 +-
man/rrvglm.Rd | 28 +-
man/rrvglm.control.Rd | 23 +-
man/s.Rd | 52 +-
man/seq2binomial.Rd | 18 +-
man/sinmad.Rd | 21 +-
man/sinmadUC.Rd | 4 +-
man/snormUC.Rd | 5 +-
man/studentt.Rd | 2 +-
man/tikuv.Rd | 4 +-
man/tikuvUC.Rd | 2 +
man/tobit.Rd | 2 +
man/toxop.Rd | 4 +-
man/tparetoUC.Rd | 3 +
man/trplot.qrrvglm.Rd | 6 +-
man/truncweibull.Rd | 150 +
man/ugss.Rd | 100 -
man/undocumented-methods.Rd | 10 +
man/uqo.Rd | 61 +-
man/uqo.control.Rd | 31 +
man/venice.Rd | 18 +-
man/vgam.Rd | 19 +-
man/vgam.control.Rd | 10 +-
man/vglm.Rd | 54 +-
man/vglm.control.Rd | 50 +-
man/vglmff-class.Rd | 44 +-
man/vsmooth.spline.Rd | 43 +-
man/weibull.Rd | 3 +-
man/wffc.P2star.Rd | 7 +-
man/wffc.Rd | 20 +-
man/wffc.indiv.Rd | 4 +-
man/wffc.nc.Rd | 6 +-
man/wffc.teams.Rd | 6 +-
man/xs.nz.Rd | 418 ---
man/zabinomial.Rd | 1 +
man/zageometric.Rd | 8 +-
man/zeta.Rd | 24 +-
man/zibinomial.Rd | 34 +-
man/zigeometric.Rd | 13 +-
man/zinegbinomial.Rd | 14 +-
man/zipebcom.Rd | 38 +-
man/zipoisson.Rd | 32 +-
src/fgam.f | 22 +-
src/rgam.f | 2 +-
src/rgam3.c | 193 +-
src/vcall2.f | 5 +-
src/vdigami.f | 156 +
src/vgam.f | 62 +-
src/vgam3.c | 1092 +++---
src/vlinpack1.f | 4 +-
src/vlinpack2.f | 18 +-
src/vlinpack3.f | 28 +-
src/vmux.f | 12 +-
352 files changed, 31179 insertions(+), 24778 deletions(-)
diff --cc debian/changelog
index 3ab74b1,0000000..4f057dd
mode 100644,000000..100644
--- a/debian/changelog
+++ b/debian/changelog
@@@ -1,123 -1,0 +1,129 @@@
++r-cran-vgam (0.9-1-1) unstable; urgency=low
++
++ * New upstream release.
++
++ -- Chris Lawrence <lawrencc at debian.org> Sat, 27 Apr 2013 21:40:01 -0400
++
+r-cran-vgam (0.9-0-1) unstable; urgency=low
+
+ * New upstream release.
+ * Rebuild for R 3.0.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 31 Mar 2013 21:00:19 -0400
+
+r-cran-vgam (0.8-7-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 13 May 2012 22:32:15 -0400
+
+r-cran-vgam (0.8-6-1) unstable; urgency=low
+
+ * New upstream release; fixes FTBFS. (Closes: #665250)
+ + Upstream now requires R >= 2.14; build dependencies updated accordingly.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 22 Mar 2012 13:44:59 -0400
+
+r-cran-vgam (0.8-4-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 04 Nov 2011 13:13:06 -0400
+
+r-cran-vgam (0.8-3-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 17 Jul 2011 16:20:26 -0500
+
+r-cran-vgam (0.8-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 20 Feb 2011 15:37:31 -0600
+
+r-cran-vgam (0.8-1-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Wed, 07 Jul 2010 03:44:27 -0500
+
+r-cran-vgam (0.7-10-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Tue, 30 Mar 2010 21:21:11 -0500
+
+r-cran-vgam (0.7-9-1) unstable; urgency=low
+
+ * New upstream release.
+ * Update debian/watch.
+
+ -- Chris Lawrence <lawrencc at debian.org> Fri, 10 Jul 2009 21:27:58 -0500
+
+r-cran-vgam (0.7-8-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 16 Mar 2009 22:22:19 -0500
+
+r-cran-vgam (0.7-7-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 29 May 2008 06:51:02 -0500
+
+r-cran-vgam (0.7-6-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 29 Mar 2008 02:04:58 -0500
+
+r-cran-vgam (0.7-5-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 06 Dec 2007 19:19:56 -0600
+
+r-cran-vgam (0.7-4-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 07 Oct 2007 20:16:15 -0500
+
+r-cran-vgam (0.7-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 14 Jun 2007 14:04:29 -0500
+
+r-cran-vgam (0.7-2-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Sun, 4 Feb 2007 15:28:54 -0600
+
+r-cran-vgam (0.7-1-1) unstable; urgency=low
+
+ * New upstream release.
+ * First upload to unstable, since VGAM is now GPL'd (yeay!).
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 26 Oct 2006 22:05:10 -0500
+
+r-other-yee-vgam (0.6-9-1) unstable; urgency=low
+
+ * New upstream release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Thu, 8 Jun 2006 20:39:52 -0400
+
+r-other-yee-vgam (0.6-3-1) unstable; urgency=low
+
+ * New upstream release
+
+ -- Chris Lawrence <lawrencc at debian.org> Sat, 9 Jul 2005 02:42:23 -0500
+
+r-other-yee-vgam (0.5-19-1) unstable; urgency=low
+
+ * Initial Debian Release.
+
+ -- Chris Lawrence <lawrencc at debian.org> Mon, 19 Apr 2004 19:12:44 -0500
diff --cc debian/rules
index 30a8108,0000000..949863e
mode 100755,000000..100755
--- a/debian/rules
+++ b/debian/rules
@@@ -1,12 -1,0 +1,21 @@@
+#!/usr/bin/make -f
+# -*- makefile -*-
+# debian/rules file for the Debian/GNU Linux r-cran-car package
+# Copyright 2003 by Dirk Eddelbuettel <edd at debian.org>
+
+DPKG_EXPORT_BUILDFLAGS = 1
+include /usr/share/dpkg/buildflags.mk
+
++PKG_CFLAGS=$(CFLAGS)
++PKG_CXXFLAGS=$(CXXFLAGS)
++PKG_CPPFLAGS=$(CPPFLAGS)
++PKG_FFLAGS=$(FFLAGS)
++
++export PKG_CFLAGS PKG_CXXFLAGS PKG_CPPFLAGS PKG_FFLAGS
++
++makeFlags="LDFLAGS=$(LDFLAGS)"
++
+include /usr/share/R/debian/r-cran.mk
+
+common-install-arch::
+ rm -vf $(debRlib)/R.css $(debRlib)/$(cranName)/COPYING
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/r-cran-vgam.git
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