[pytables] branch master updated (824aed9 -> d50c118)
Antonio Valentino
a_valentino-guest at moszumanska.debian.org
Fri Jun 30 18:07:41 UTC 2017
This is an automated email from the git hooks/post-receive script.
a_valentino-guest pushed a change to branch master
in repository pytables.
from 824aed9 Remove old patches and fix compatibility with python 2.7.13
new b5838e8 New upstream version 3.4.2
new 8765448 Updated version 3.4.2 from 'upstream/3.4.2'
new a0d7788 New upstream release
new 534539a Standard version bump
new 86571f3 Ensure that autopkgtest scripts return the correct exit code
new b80551c Refresh all patches
new bc35942 Update license file
new b7530eb Update build dependencies
new 95ce9b8 Remove -dbg packages
new bad066c No longer use dpkg-parsechangelog
new ac9bd04 Avoid duplicate files in the doc
new 0e116d9 Use local mathjax
new 01f8175 New lintian overrides
new 6f762f6 Set Multi-Arch fields in the control file
new d50c118 Switch to python3 as default version for sctipts and doc
The 15 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.readthedocs.yml | 7 +
.travis.yml | 6 +-
ANNOUNCE.txt.in | 2 +-
.../zstd-1.0.0/LICENSE => LICENSES/ZSTD.TXT | 0
Makefile | 2 +-
README.rst | 5 +-
RELEASE_NOTES.txt | 36 +-
VERSION | 2 +-
appveyor.yml | 72 +-
c-blosc/.gitignore | 2 +
c-blosc/ANNOUNCE.rst | 21 +-
c-blosc/CMakeLists.txt | 87 +-
c-blosc/README.rst | 2 +-
c-blosc/RELEASE_NOTES.rst | 23 +
c-blosc/bench/bench.c | 8 +-
c-blosc/blosc.pc.in | 14 +
c-blosc/blosc/CMakeLists.txt | 67 +-
c-blosc/blosc/bitshuffle-generic.c | 74 +-
c-blosc/blosc/bitshuffle-generic.h | 26 +-
c-blosc/blosc/blosc.c | 14 +-
c-blosc/blosc/blosc.h | 6 +-
c-blosc/internal-complibs/lz4-1.7.2/lz4.h | 360 -------
c-blosc/internal-complibs/lz4-1.7.2/lz4hc.h | 189 ----
.../{lz4-1.7.2 => lz4-1.7.5}/lz4.c | 701 ++++++-------
c-blosc/internal-complibs/lz4-1.7.5/lz4.h | 463 +++++++++
.../{lz4-1.7.2 => lz4-1.7.5}/lz4hc.c | 352 +++----
c-blosc/internal-complibs/lz4-1.7.5/lz4hc.h | 228 +++++
c-blosc/internal-complibs/lz4-1.7.5/lz4opt.h | 363 +++++++
c-blosc/internal-complibs/zstd-1.0.0/Makefile | 115 ---
.../zstd-1.0.0/compress/zbuff_compress.c | 319 ------
.../zstd-1.0.0/decompress/zbuff_decompress.c | 252 -----
.../zstd-1.0.0/dictBuilder/zdict.h | 111 --
c-blosc/internal-complibs/zstd-1.1.3/BUCK | 186 ++++
c-blosc/internal-complibs/zstd-1.1.3/Makefile | 160 +++
.../{zstd-1.0.0 => zstd-1.1.3}/README.md | 22 +-
.../{zstd-1.0.0 => zstd-1.1.3}/common/bitstream.h | 8 +-
.../common/entropy_common.c | 15 +-
.../common/error_private.c} | 71 +-
.../common/error_private.h | 32 +-
.../{zstd-1.0.0 => zstd-1.1.3}/common/fse.h | 72 +-
.../common/fse_decompress.c | 49 +-
.../{zstd-1.0.0 => zstd-1.1.3}/common/huf.h | 46 +-
.../{zstd-1.0.0 => zstd-1.1.3}/common/mem.h | 6 +-
c-blosc/internal-complibs/zstd-1.1.3/common/pool.c | 194 ++++
c-blosc/internal-complibs/zstd-1.1.3/common/pool.h | 56 ++
.../zstd-1.1.3/common/threading.c | 79 ++
.../zstd-1.1.3/common/threading.h | 104 ++
.../{zstd-1.0.0 => zstd-1.1.3}/common/xxhash.c | 2 +-
.../{zstd-1.0.0 => zstd-1.1.3}/common/xxhash.h | 0
.../common/zstd_common.c | 10 -
.../common/zstd_errors.h} | 25 +-
.../common/zstd_internal.h | 59 +-
.../compress/fse_compress.c | 217 ++--
.../compress/huf_compress.c | 209 ++--
.../compress/zstd_compress.c | 691 ++++++++-----
.../{zstd-1.0.0 => zstd-1.1.3}/compress/zstd_opt.h | 159 +--
.../zstd-1.1.3/compress/zstdmt_compress.c | 740 ++++++++++++++
.../zstd-1.1.3/compress/zstdmt_compress.h | 78 ++
.../decompress/huf_decompress.c | 22 +-
.../decompress/zstd_decompress.c | 1056 +++++++++++++++-----
.../common => zstd-1.1.3/deprecated}/zbuff.h | 97 +-
.../zstd-1.1.3/deprecated/zbuff_common.c | 26 +
.../zstd-1.1.3/deprecated/zbuff_compress.c | 145 +++
.../zstd-1.1.3/deprecated/zbuff_decompress.c | 74 ++
.../zstd-1.1.3/dictBuilder/cover.c | 1021 +++++++++++++++++++
.../dictBuilder/divsufsort.c | 0
.../dictBuilder/divsufsort.h | 0
.../{zstd-1.0.0 => zstd-1.1.3}/dictBuilder/zdict.c | 189 ++--
.../zstd-1.1.3/dictBuilder/zdict.h | 201 ++++
.../zstd-1.1.3/dll/example/Makefile | 47 +
.../zstd-1.1.3/dll/example/README.md | 69 ++
.../zstd-1.1.3/dll/example/build_package.bat | 17 +
.../zstd-1.1.3/dll/example/fullbench-dll.sln | 25 +
.../zstd-1.1.3/dll/example/fullbench-dll.vcxproj | 181 ++++
.../internal-complibs/zstd-1.1.3/dll/libzstd.def | 86 ++
.../legacy/zstd_legacy.h | 0
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v01.c | 198 ++--
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v01.h | 0
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v02.c | 102 +-
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v02.h | 0
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v03.c | 105 +-
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v03.h | 0
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v04.c | 278 +-----
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v04.h | 0
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v05.c | 292 ++----
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v05.h | 0
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v06.c | 287 +-----
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v06.h | 68 +-
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v07.c | 319 ++----
.../{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v07.h | 59 +-
.../{zstd-1.0.0 => zstd-1.1.3}/libzstd.pc.in | 10 +-
.../{zstd-1.0.0 => zstd-1.1.3}/zstd.h | 456 +++++----
c-blosc/tests/Makefile | 4 +-
c-blosc/tests/test_common.h | 2 +-
cpuinfo.py | 737 ++++++++------
debian/changelog | 33 +
debian/control | 90 +-
debian/copyright | 48 +-
debian/patches/0001-use-dynamic-lib.patch | 4 +-
.../0002-Never-use-the-msse2-flag-explicitly.patch | 26 +-
...Do-not-fetch-icons-for-external-web-sites.patch | 21 -
debian/patches/0003-use-local-mathjax.patch | 19 +
.../0004-fix-compatibility-with-HDF5-1.10.patch | 329 ------
.../0005-Ignore-cpuinfo-on-unsupported-archs.patch | 46 -
.../0006-allow-for-long-type-in-nextafter.patch | 29 -
debian/patches/0007-fix-base-class-order.patch | 39 -
debian/patches/series | 6 +-
...ython-tables.install => python3-tables.install} | 0
debian/python3-tables.lintian-overrides | 4 +
...hon-tables.manpages => python3-tables.manpages} | 0
debian/rules | 33 +-
debian/tests/control | 5 -
debian/tests/python2 | 2 +-
debian/tests/python2-dbg | 12 -
debian/tests/python3 | 2 +-
debian/tests/python3-dbg | 12 -
doc/source/_templates/travis-ci.html | 3 -
.../altered_nature/static/altered_nature.css_t | 299 ------
.../_theme/altered_nature/static/old_pygments.css | 54 -
doc/source/_theme/altered_nature/theme.conf | 4 -
doc/source/_theme/cloud/layout.html | 98 --
doc/source/_theme/cloud/static/cloud.css_t | 969 ------------------
doc/source/_theme/cloud/static/icon-note.png | Bin 1204 -> 0 bytes
doc/source/_theme/cloud/static/icon-seealso.png | Bin 951 -> 0 bytes
doc/source/_theme/cloud/static/icon-todo.png | Bin 1324 -> 0 bytes
doc/source/_theme/cloud/static/icon-warning.png | Bin 887 -> 0 bytes
doc/source/_theme/cloud/static/jquery.cookie.js | 41 -
doc/source/_theme/cloud/static/toggle_sections.js | 67 --
doc/source/_theme/cloud/static/toggle_sidebar.js_t | 49 -
doc/source/_theme/cloud/theme.conf | 74 --
doc/source/conf.py | 155 +--
doc/source/cookbook/py2exe_howto/pytables_test.py | 5 +-
doc/source/cookbook/threading.rst | 4 +-
doc/source/dev_team.rst | 3 +-
doc/source/release-notes/RELEASE_NOTES_v3.3.x.rst | 34 +-
...E_NOTES_v3.3.x.rst => RELEASE_NOTES_v3.4.x.rst} | 0
doc/source/release_notes.rst | 7 +-
doc/source/usersguide/index.rst | 2 +-
doc/source/usersguide/installation.rst | 35 +-
.../usersguide/libref/homogenous_storage.rst | 4 +-
doc/source/usersguide/usersguide.rst | 3 +-
doc/sphinxext/LICENSE.txt | 141 ---
doc/sphinxext/__init__.py | 1 -
doc/sphinxext/apigen.py | 427 --------
doc/sphinxext/comment_eater.py | 158 ---
doc/sphinxext/compiler_unparse.py | 860 ----------------
doc/sphinxext/docscrape.py | 500 ---------
doc/sphinxext/docscrape_sphinx.py | 227 -----
doc/sphinxext/inheritance_diagram.py | 407 --------
doc/sphinxext/ipython_console_highlighting.py | 114 ---
doc/sphinxext/ipython_directive.py | 635 ------------
doc/sphinxext/numpydoc.py | 169 ----
doc/sphinxext/phantom_import.py | 162 ---
doc/sphinxext/plot_directive.py | 636 ------------
doc/sphinxext/setup.py | 31 -
doc/sphinxext/traitsdoc.py | 140 ---
environment.yml | 3 +
requirements.txt | 2 +-
setup.py | 106 +-
src/H5ARRAY.c | 4 +-
src/H5ARRAY.h | 2 +-
src/H5TB-opt.c | 2 +-
src/H5TB-opt.h | 2 +-
src/H5VLARRAY.c | 2 +-
src/H5VLARRAY.h | 2 +-
tables/atom.py | 2 +-
tables/attributeset.py | 1 +
tables/definitions.pxd | 117 ++-
tables/description.py | 1 +
tables/exceptions.py | 1 +
tables/file.py | 1 +
tables/filters.py | 1 +
tables/group.py | 2 +-
tables/hdf5extension.pyx | 10 +-
tables/idxutils.py | 3 +-
tables/index.py | 3 +-
tables/indexes.py | 12 +-
tables/leaf.py | 2 +
tables/link.py | 5 +-
tables/linkextension.pyx | 8 +-
tables/scripts/ptdump.py | 2 +-
tables/scripts/ptrepack.py | 13 +-
tables/scripts/pttree.py | 2 +-
tables/table.py | 2 +
tables/tests/test_all.py | 1 +
tables/tests/test_create.py | 46 +-
tables/tests/test_utils.py | 95 ++
tables/unimplemented.py | 2 +
tables/utilsextension.pxd | 4 +-
tables/utilsextension.pyx | 10 +-
190 files changed, 8977 insertions(+), 12164 deletions(-)
create mode 100644 .readthedocs.yml
rename c-blosc/internal-complibs/zstd-1.0.0/LICENSE => LICENSES/ZSTD.TXT (100%)
create mode 100644 c-blosc/blosc.pc.in
delete mode 100644 c-blosc/internal-complibs/lz4-1.7.2/lz4.h
delete mode 100644 c-blosc/internal-complibs/lz4-1.7.2/lz4hc.h
rename c-blosc/internal-complibs/{lz4-1.7.2 => lz4-1.7.5}/lz4.c (70%)
create mode 100644 c-blosc/internal-complibs/lz4-1.7.5/lz4.h
rename c-blosc/internal-complibs/{lz4-1.7.2 => lz4-1.7.5}/lz4hc.c (70%)
create mode 100644 c-blosc/internal-complibs/lz4-1.7.5/lz4hc.h
create mode 100644 c-blosc/internal-complibs/lz4-1.7.5/lz4opt.h
delete mode 100644 c-blosc/internal-complibs/zstd-1.0.0/Makefile
delete mode 100644 c-blosc/internal-complibs/zstd-1.0.0/compress/zbuff_compress.c
delete mode 100644 c-blosc/internal-complibs/zstd-1.0.0/decompress/zbuff_decompress.c
delete mode 100644 c-blosc/internal-complibs/zstd-1.0.0/dictBuilder/zdict.h
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/BUCK
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/Makefile
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/README.md (72%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/bitstream.h (97%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/entropy_common.c (91%)
copy c-blosc/internal-complibs/{zstd-1.0.0/common/error_private.h => zstd-1.1.3/common/error_private.c} (50%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/error_private.h (53%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/fse.h (90%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/fse_decompress.c (88%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/huf.h (85%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/mem.h (98%)
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/common/pool.c
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/common/pool.h
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/common/threading.c
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/common/threading.h
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/xxhash.c (99%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/xxhash.h (100%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/zstd_common.c (84%)
rename c-blosc/internal-complibs/{zstd-1.0.0/common/error_public.h => zstd-1.1.3/common/zstd_errors.h} (60%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/common/zstd_internal.h (77%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/compress/fse_compress.c (77%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/compress/huf_compress.c (74%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/compress/zstd_compress.c (84%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/compress/zstd_opt.h (88%)
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/compress/zstdmt_compress.c
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/compress/zstdmt_compress.h
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/decompress/huf_decompress.c (98%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/decompress/zstd_decompress.c (58%)
rename c-blosc/internal-complibs/{zstd-1.0.0/common => zstd-1.1.3/deprecated}/zbuff.h (66%)
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/deprecated/zbuff_common.c
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/deprecated/zbuff_compress.c
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/deprecated/zbuff_decompress.c
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/dictBuilder/cover.c
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/dictBuilder/divsufsort.c (100%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/dictBuilder/divsufsort.h (100%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/dictBuilder/zdict.c (84%)
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/dictBuilder/zdict.h
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/dll/example/Makefile
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/dll/example/README.md
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/dll/example/build_package.bat
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/dll/example/fullbench-dll.sln
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/dll/example/fullbench-dll.vcxproj
create mode 100644 c-blosc/internal-complibs/zstd-1.1.3/dll/libzstd.def
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_legacy.h (100%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v01.c (89%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v01.h (100%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v02.c (97%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v02.h (100%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v03.c (97%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v03.h (100%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v04.c (93%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v04.h (100%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v05.c (94%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v05.h (100%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v06.c (94%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v06.h (63%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v07.c (94%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/legacy/zstd_v07.h (70%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/libzstd.pc.in (53%)
rename c-blosc/internal-complibs/{zstd-1.0.0 => zstd-1.1.3}/zstd.h (61%)
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delete mode 100644 debian/patches/0005-Ignore-cpuinfo-on-unsupported-archs.patch
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delete mode 100644 doc/sphinxext/phantom_import.py
delete mode 100644 doc/sphinxext/plot_directive.py
delete mode 100644 doc/sphinxext/setup.py
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create mode 100644 environment.yml
create mode 100644 tables/tests/test_utils.py
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