[hypre] 02/04: Updated version 2.12.1 from 'upstream/2.12.1'
Drew Parsons
dparsons at moszumanska.debian.org
Wed Oct 18 11:15:24 UTC 2017
This is an automated email from the git hooks/post-receive script.
dparsons pushed a commit to branch experimental
in repository hypre.
commit 5321750b46dca65e9390115cfae6bae6157187de
Merge: 702326b b0efb9c
Author: Drew Parsons <dparsons at debian.org>
Date: Wed Oct 18 18:49:47 2017 +0800
Updated version 2.12.1 from 'upstream/2.12.1'
with Debian dir c9ad7f58860944339cf6ce1b774778e45d59bec1
AUTOTEST/README.txt | 27 +-
AUTOTEST/autotest.sh | 283 --
AUTOTEST/{basictest.sh => basic.sh} | 0
AUTOTEST/check-double.filters | 9 +-
AUTOTEST/check-int.filters | 8 +
AUTOTEST/check-mpi.filters | 11 +-
AUTOTEST/{cmaketest.sh => cmake.sh} | 2 +-
AUTOTEST/cronfile | 29 -
AUTOTEST/machine-mac.sh | 12 +-
AUTOTEST/{machine-rzmerl.sh => machine-rztopaz.sh} | 20 +-
AUTOTEST/{machine-rzzeus.sh => machine-syrah.sh} | 20 +-
AUTOTEST/machine-tux.sh | 102 +-
AUTOTEST/machine-vulcan.sh | 12 +-
AUTOTEST/testdist.sh | 174 --
AUTOTEST/testsrc.sh | 89 -
CHANGELOG | 14 +
docs/HYPRE_ref_manual.pdf | Bin 874193 -> 874961 bytes
docs/HYPRE_usr_manual.pdf | Bin 653348 -> 653348 bytes
src/CMakeLists.txt | 16 +-
src/FEI_mv/fei-hypre/HYPRE_LSC_aux.cxx | 6 +-
src/FEI_mv/fei-hypre/Makefile | 4 +-
src/IJ_mv/IJVector_parcsr.c | 5 +-
src/Makefile | 1 +
src/blas/hypre_blas.h | 4 +-
src/config/HYPRE_config.h.cmake.in | 6 +
src/config/HYPRE_config.h.in | 9 +
src/config/Makefile.config.in | 34 +-
src/config/config.guess | 20 +-
src/config/configure.in | 428 ++-
src/configure | 787 +++++-
src/distributed_ls/Euclid/Euclid_dh.c | 17 +-
src/distributed_ls/Euclid/ExternalRows_dh.c | 4 +-
src/distributed_ls/Euclid/Factor_dh.c | 10 +-
src/distributed_ls/Euclid/Mat_dh.c | 8 +-
src/distributed_ls/Euclid/TimeLog_dh.c | 4 +-
src/distributed_ls/Euclid/_hypre_Euclid.h | 12 +-
src/distributed_ls/Euclid/blas_dh.c | 4 +-
src/distributed_ls/Euclid/globalObjects.c | 3 +
src/distributed_ls/Euclid/macros_dh.h | 4 +
src/distributed_ls/Euclid/mat_dh_private.c | 8 +-
src/distributed_ls/ParaSails/ConjGrad.c | 2 +-
src/distributed_ls/ParaSails/DiagScale.c | 4 +-
src/distributed_ls/ParaSails/FGmres.c | 2 +-
src/distributed_ls/ParaSails/LoadBal.c | 8 +-
src/distributed_ls/ParaSails/Matrix.c | 12 +-
src/distributed_ls/ParaSails/ParaSails.c | 18 +-
src/distributed_ls/ParaSails/driver.c | 12 +-
src/distributed_ls/ParaSails/lapdriver.c | 4 +-
src/distributed_ls/pilut/comm.c | 6 +-
src/distributed_ls/pilut/parilut.c | 4 +-
src/distributed_ls/pilut/trifactor.c | 8 +-
src/examples/README_files/ex12f.f.html | 2 +-
src/examples/ex12f.f | 2 +-
src/krylov/bicgstab.c | 3 +-
src/krylov/gmres.c | 1 -
src/krylov/lobpcg.c | 2 +-
src/krylov/pcg.c | 4 +-
src/lapack/dbdsqr.c | 2 +-
src/lapack/dgesvd.c | 1 -
src/lapack/dlabad.c | 2 +-
src/lapack/dlae2.c | 2 -
src/lapack/dlaev2.c | 2 -
src/lapack/dlanst.c | 2 -
src/lapack/dlartg.c | 11 +-
src/lapack/dlas2.c | 2 -
src/lapack/dlasq1.c | 3 -
src/lapack/dlasq2.c | 3 -
src/lapack/dlasq3.c | 2 -
src/lapack/dlasq4.c | 3 -
src/lapack/dlasv2.c | 2 +-
src/lapack/dsteqr.c | 2 +-
src/lapack/dsterf.c | 2 +-
src/lapack/dsyev.c | 2 -
src/lapack/hypre_lapack.h | 6 +
src/multivector/backup.c | 4 +-
src/multivector/csr_matmultivec.c | 2 +-
src/parcsr_ls/F90_HYPRE_parcsr_amg.c | 106 +-
src/parcsr_ls/HYPRE_parcsr_amg.c | 48 +-
src/parcsr_ls/HYPRE_parcsr_ls.h | 50 +
src/parcsr_ls/Makefile | 2 +
src/parcsr_ls/_hypre_parcsr_ls.h | 44 +-
src/parcsr_ls/ams.c | 42 +-
src/parcsr_ls/gen_redcs_mat.c | 14 +-
src/parcsr_ls/par_add_cycle.c | 226 +-
src/parcsr_ls/par_amg.c | 107 +
src/parcsr_ls/par_amg.h | 18 +-
src/parcsr_ls/par_amg_setup.c | 275 +-
src/parcsr_ls/par_cheby.c | 338 +++
src/parcsr_ls/par_coarsen.c | 3 +-
src/parcsr_ls/par_cr.c | 18 +-
src/parcsr_ls/par_cycle.c | 34 +-
src/parcsr_ls/par_gsmg.c | 2 +-
src/parcsr_ls/par_jacobi_interp.c | 2 +-
src/parcsr_ls/par_relax.c | 26 +-
src/parcsr_ls/par_relax_more.c | 53 +-
src/parcsr_ls/par_stats.c | 84 +-
src/parcsr_ls/par_strength.c | 1 +
src/parcsr_ls/par_vardifconv.c | 9 +-
.../{par_vardifconv.c => par_vardifconv_rs.c} | 309 ++-
src/parcsr_mv/_hypre_parcsr_mv.h | 6 +
src/parcsr_mv/par_csr_communication.c | 2 +-
src/parcsr_mv/par_csr_matrix.c | 8 +
src/parcsr_mv/par_csr_matvec.c | 47 +-
src/parcsr_mv/par_vector.c | 6 +
src/seq_mv/Makefile | 8 +-
src/seq_mv/Makefile.empty | 1 +
src/seq_mv/Makefile.nvcc | 4 +
src/seq_mv/csr_matrix.c | 45 +-
src/seq_mv/csr_matvec.c | 85 +-
src/seq_mv/gpukernels.cu | 243 ++
src/seq_mv/gpukernels.h | 9 +
src/seq_mv/headers | 1 +
src/seq_mv/seq_mv.h | 42 +-
src/seq_mv/vector.c | 161 +-
src/sstruct_ls/HYPRE_sstruct_int.c | 8 +-
src/sstruct_ls/fac_amr_fcoarsen.c | 48 +-
src/sstruct_ls/fac_amr_rap.c | 7 +-
src/sstruct_ls/fac_cf_coarsen.c | 36 +-
src/sstruct_ls/fac_interp2.c | 37 +-
src/sstruct_ls/fac_restrict2.c | 25 +-
src/sstruct_ls/fac_setup2.c | 11 +-
src/sstruct_ls/fac_zero_stencilcoef.c | 20 +-
src/sstruct_ls/maxwell_PNedelec.c | 350 +--
src/sstruct_ls/maxwell_TV_setup.c | 9 +-
src/sstruct_ls/maxwell_grad.c | 30 +-
src/sstruct_ls/maxwell_physbdy.c | 12 +-
src/sstruct_ls/maxwell_semi_interp.c | 435 +--
src/sstruct_ls/node_relax.c | 36 +-
src/sstruct_ls/sstruct_sharedDOFComm.c | 14 +-
src/sstruct_mv/_hypre_sstruct_mv.h | 3 +
src/sstruct_mv/headers | 3 +
src/sstruct_mv/sstruct_matrix.c | 44 +-
src/sstruct_mv/sstruct_vector.c | 8 +-
src/struct_ls/HYPRE_struct_int.c | 9 +-
src/struct_ls/HYPRE_struct_pcg.c | 6 +-
src/struct_ls/_hypre_struct_ls.h | 2 -
src/struct_ls/cyclic_reduction.c | 65 +-
src/struct_ls/pfmg.c | 11 +-
src/struct_ls/pfmg2_setup_rap.c | 92 +-
src/struct_ls/pfmg3_setup_rap.c | 191 +-
src/struct_ls/pfmg_setup.c | 274 +-
src/struct_ls/pfmg_setup_interp.c | 70 +-
src/struct_ls/pfmg_setup_rap5.c | 15 +-
src/struct_ls/pfmg_setup_rap7.c | 10 +-
src/struct_ls/pfmg_solve.c | 2 +-
src/struct_ls/point_relax.c | 62 +-
src/struct_ls/red_black_constantcoef_gs.c | 229 +-
src/struct_ls/red_black_gs.c | 125 +-
src/struct_ls/red_black_gs.h | 223 ++
src/struct_ls/semi_interp.c | 8 +-
src/struct_ls/semi_restrict.c | 6 +-
src/struct_ls/semi_setup_rap.c | 19 +-
src/struct_ls/smg.c | 7 +-
src/struct_ls/smg2_setup_rap.c | 72 +-
src/struct_ls/smg3_setup_rap.c | 108 +-
src/struct_ls/smg_axpy.c | 5 +-
src/struct_ls/smg_relax.c | 3 +-
src/struct_ls/smg_residual.c | 9 +-
src/struct_ls/smg_setup.c | 5 +-
src/struct_ls/smg_setup_interp.c | 4 +-
src/struct_ls/sparse_msg2_setup_rap.c | 45 +-
src/struct_ls/sparse_msg3_setup_rap.c | 61 +-
src/struct_ls/sparse_msg_filter.c | 49 +-
src/struct_ls/sparse_msg_interp.c | 10 +-
src/struct_ls/sparse_msg_restrict.c | 8 +-
src/struct_ls/sparse_msg_setup.c | 36 +-
src/struct_mv/_hypre_struct_mv.h | 2919 ++++++++++++++++++--
src/struct_mv/assumed_part.c | 14 +-
src/struct_mv/box.h | 410 +--
src/struct_mv/box_manager.c | 16 +-
src/struct_mv/boxloop.h | 384 +++
src/struct_mv/boxloop_cuda.h | 717 +++++
src/struct_mv/boxloop_kokkos.h | 542 ++++
src/struct_mv/boxloop_raja.h | 845 ++++++
src/struct_mv/communication_info.c | 13 +-
src/struct_mv/headers | 50 +-
src/struct_mv/protos.h | 2 +-
src/struct_mv/struct_axpy.c | 16 +-
src/struct_mv/struct_communication.c | 343 ++-
src/struct_mv/struct_communication.h | 5 +
src/struct_mv/struct_copy.c | 10 +-
src/struct_mv/struct_grid.c | 6 +-
src/struct_mv/struct_innerprod.c | 42 +-
src/struct_mv/struct_io.c | 46 +-
src/struct_mv/struct_matrix.c | 40 +-
src/struct_mv/struct_matvec.c | 64 +-
src/struct_mv/struct_scale.c | 3 +-
src/struct_mv/struct_vector.c | 80 +-
src/test/Makefile | 6 +
src/test/TEST_examples/complex.jobs | 2 +-
src/test/TEST_examples/maxdim.jobs | 4 +-
src/test/TEST_ij/smoother.jobs | 19 +
src/test/TEST_ij/smoother.saved | 20 +
src/test/TEST_ij/smoother.sh | 5 +
src/test/TEST_ij/solvers.jobs | 3 +
src/test/TEST_ij/solvers.saved | 12 +
src/test/TEST_ij/solvers.sh | 3 +
.../solvers_ij.jobs} | 64 +-
src/test/TEST_longdouble/solvers_ij.saved | 145 +
.../solvers.sh => TEST_longdouble/solvers_ij.sh} | 0
src/test/TEST_longdouble/solvers_struct.jobs | 63 +
src/test/TEST_longdouble/solvers_struct.saved | 120 +
.../solvers_struct.sh} | 39 +-
.../solvers.jobs => TEST_single/solvers_ij.jobs} | 64 +-
src/test/TEST_single/solvers_ij.saved | 145 +
.../solvers.sh => TEST_single/solvers_ij.sh} | 7 +-
src/test/TEST_single/solvers_struct.jobs | 63 +
src/test/TEST_single/solvers_struct.saved | 120 +
.../smoother.sh => TEST_single/solvers_struct.sh} | 39 +-
src/test/TEST_sstruct/solvers.saved | 80 +-
src/test/TEST_struct/solvers.saved | 120 +-
src/test/ams_driver.c | 4 +-
src/test/for_maxwell.c | 2 +-
src/test/ij.c | 892 +++---
src/test/maxwell_unscaled.c | 5 +-
src/test/runtest.sh | 2 +-
src/test/sstruct.c | 12 +-
src/test/struct.c | 68 +-
src/test/struct_migrate.c | 24 +-
src/test/struct_newboxloop.c | 1956 +++++++++++++
src/test/zboxloop.c | 30 +-
src/utilities/HYPRE_utilities.h | 36 +-
src/utilities/Makefile | 4 +-
src/utilities/_hypre_utilities.h | 631 ++++-
src/utilities/amg_linklist.h | 3 +-
src/utilities/caliper_instrumentation.h | 1 +
src/utilities/exchange_data.h | 9 +-
src/utilities/general.h | 11 +-
src/utilities/{threading.h => gpgpu.h} | 23 +-
src/utilities/gpuErrorCheck.c | 111 +
src/utilities/gpuErrorCheck.h | 153 +
src/utilities/gpuMem.c | 513 ++++
src/utilities/gpuMem.h | 104 +
src/utilities/headers | 23 +-
src/utilities/hypre_error.h | 3 +-
src/utilities/hypre_memory.c | 244 +-
src/utilities/hypre_memory.h | 185 ++
src/utilities/hypre_nvtx.h | 72 +
src/utilities/hypre_printf.c | 46 +-
src/utilities/mpistubs.c | 2 +-
src/utilities/mpistubs.h | 43 +-
src/utilities/protos.h | 221 ++
src/utilities/random.c | 53 +-
src/utilities/threading.h | 1 +
src/utilities/timing.c | 4 +-
src/utilities/timing.h | 3 +-
246 files changed, 16688 insertions(+), 4327 deletions(-)
--
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