[r-cran-cvst] 02/02: Initial packaging
Andreas Tille
tille at debian.org
Sun Oct 22 21:36:18 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository r-cran-cvst.
commit d013042e79bccfb1658bcb387f103ccf35bc3ce5
Author: Andreas Tille <tille at debian.org>
Date: Sun Oct 22 23:36:04 2017 +0200
Initial packaging
---
debian/changelog | 5 +++++
debian/compat | 1 +
debian/control | 36 ++++++++++++++++++++++++++++++++++++
debian/copyright | 27 +++++++++++++++++++++++++++
debian/docs | 2 ++
debian/rules | 5 +++++
debian/source/format | 1 +
debian/tests/control | 5 +++++
debian/tests/run-unit-test | 17 +++++++++++++++++
debian/watch | 2 ++
10 files changed, 101 insertions(+)
diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 0000000..7542f4b
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,5 @@
+r-cran-cvst (0.2-1-1) UNRELEASED; urgency=medium
+
+ * Initial release (closes: #xxxxxx)
+
+ -- Andreas Tille <tille at debian.org> Sun, 22 Oct 2017 23:27:31 +0200
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 0000000..f599e28
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+10
diff --git a/debian/control b/debian/control
new file mode 100644
index 0000000..0fdcdd5
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,36 @@
+Source: r-cran-cvst
+Maintainer: Debian Science Maintainers <debian-science-maintainers at lists.alioth.debian.org>
+Uploaders: Andreas Tille <tille at debian.org>
+Section: gnu-r
+Priority: optional
+Build-Depends: debhelper (>= 10),
+ dh-r,
+ r-base-dev,
+ r-cran-kernlab,
+ r-cran-matrix
+Standards-Version: 4.1.1
+Vcs-Browser: https://anonscm.debian.org/git/debian-science/packages/r-cran-cvst.git
+Vcs-Git: https://anonscm.debian.org/git/debian-science/packages/r-cran-cvst.git
+Homepage: https://cran.r-project.org/package=CVST
+
+Package: r-cran-cvst
+Architecture: all
+Depends: ${R:Depends},
+ ${shlibs:Depends},
+ ${misc:Depends}
+Recommends: ${R:Recommends}
+Suggests: ${R:Suggests}
+Description: GNU R fast cross-validation via sequential testing
+ This package implements the fast cross-validation via sequential testing
+ (CVST) procedure. CVST is an improved cross-validation procedure which
+ uses non-parametric testing coupled with sequential analysis to
+ determine the best parameter set on linearly increasing subsets of the
+ data. By eliminating underperforming candidates quickly and keeping
+ promising candidates as long as possible, the method speeds up the
+ computation while preserving the capability of a full cross-validation.
+ Additionally to the CVST the package contains an implementation of the
+ ordinary k-fold cross-validation with a flexible and powerful set of
+ helper objects and methods to handle the overall model selection
+ process. The implementations of the Cochran's Q test with permutations
+ and the sequential testing framework of Wald are generic and can
+ therefore also be used in other contexts.
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..890c2d7
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,27 @@
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: CVST
+Upstream-Contact: Tammo Krueger <tammokrueger at googlemail.com>
+Source: https://cran.r-project.org/package=CVST
+
+Files: *
+Copyright: 2012-2013 Tammo Krueger, Mikio Braun
+License: GPL-2+
+
+Files: debian/*
+Copyright: 2017 Andreas Tille <tille at debian.org>
+License: GPL-2+
+
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ On Debian systems you can find the full text of the GNU General Public
+ License at /usr/share/common-licenses/GPL-2.
+
diff --git a/debian/docs b/debian/docs
new file mode 100644
index 0000000..67ce40b
--- /dev/null
+++ b/debian/docs
@@ -0,0 +1,2 @@
+debian/tests/run-unit-test
+tests
diff --git a/debian/rules b/debian/rules
new file mode 100755
index 0000000..529c38a
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,5 @@
+#!/usr/bin/make -f
+
+%:
+ dh $@ --buildsystem R
+
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 0000000..163aaf8
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)
diff --git a/debian/tests/control b/debian/tests/control
new file mode 100644
index 0000000..d6849ad
--- /dev/null
+++ b/debian/tests/control
@@ -0,0 +1,5 @@
+Tests: run-unit-test
+Depends: @,
+Restrictions: allow-stderr
+
+
diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test
new file mode 100644
index 0000000..ce7916c
--- /dev/null
+++ b/debian/tests/run-unit-test
@@ -0,0 +1,17 @@
+#!/bin/sh -e
+
+pkgname=CVST
+debname=r-cran-cvst
+
+if [ "$ADTTMP" = "" ] ; then
+ ADTTMP=`mktemp -d /tmp/${debname}-test.XXXXXX`
+ trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM
+fi
+cd $ADTTMP
+cp -a /usr/share/doc/$debname/tests/* $ADTTMP
+gunzip -r *
+for testfile in *.R; do
+ echo "BEGIN TEST $testfile"
+ LC_ALL=C R --no-save < $testfile
+done
+
diff --git a/debian/watch b/debian/watch
new file mode 100644
index 0000000..36c8c0a
--- /dev/null
+++ b/debian/watch
@@ -0,0 +1,2 @@
+version=4
+https://cran.r-project.org/src/contrib/CVST_([-\d.]*)\.tar\.gz
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-science/packages/r-cran-cvst.git
More information about the debian-science-commits
mailing list