[r-cran-ddalpha] 01/01: There is no point to package BH

[Andreas Tille]

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tille pushed a commit to branch master
in repository r-cran-ddalpha.

commit 3cb41ab065681466cc40f9e80dd5792d9e502244
Author: Andreas Tille <tille at debian.org>
Date:   Mon Oct 23 11:40:23 2017 +0200

    There is no point to package BH
---
 debian/changelog                               |  2 --
 debian/control                                 |  3 +--
 debian/patches/series                          |  1 +
 debian/patches/use_debian_packages_boost.patch | 18 ++++++++++++++++++
 4 files changed, 20 insertions(+), 4 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index e670b7b..8fe76c0 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -3,7 +3,5 @@ r-cran-ddalpha (1.3.1-1) UNRELEASED; urgency=medium
   * Initial release (closes: #xxxxxx)
   TODO: package
           r-cran-sfsmisc
-          r-cran-bh
-
 
  -- Andreas Tille <tille at debian.org>  Mon, 23 Oct 2017 11:18:19 +0200
diff --git a/debian/control b/debian/control
index 7bbc4bd..0c4cd46 100644
--- a/debian/control
+++ b/debian/control
@@ -10,8 +10,7 @@ Build-Depends: debhelper (>= 10),
                r-cran-class,
                r-cran-robustbase,
                r-cran-rcpp (>= 0.11.0),
-               r-cran-sfsmisc,
-               r-cran-bh
+               r-cran-sfsmisc
 Standards-Version: 4.1.1
 Vcs-Browser: https://anonscm.debian.org/cgit/debian-science/packages/r-cran-ddalpha.git
 Vcs-Git: https://anonscm.debian.org/git/debian-science/packages/r-cran-ddalpha.git
diff --git a/debian/patches/series b/debian/patches/series
new file mode 100644
index 0000000..450a5f3
--- /dev/null
+++ b/debian/patches/series
@@ -0,0 +1 @@
+use_debian_packages_boost.patch
diff --git a/debian/patches/use_debian_packages_boost.patch b/debian/patches/use_debian_packages_boost.patch
new file mode 100644
index 0000000..a2a320d
--- /dev/null
+++ b/debian/patches/use_debian_packages_boost.patch
@@ -0,0 +1,18 @@
+Description: Use Debian packaged boost library
+ don't require the BH package for R when building
+ BH is a bundle of Boost headers for R. We can use Boost directly via
+ Debian to build this package, so BH isn't needed.
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Mon, 23 Oct 2017 11:18:19 +0200
+
+--- a/DESCRIPTION
++++ b/DESCRIPTION
+@@ -15,7 +15,7 @@ SystemRequirements: C++11
+ Depends: stats, utils, graphics, grDevices, MASS, class, robustbase,
+         sfsmisc
+ Imports: Rcpp (>= 0.11.0)
+-LinkingTo: BH, Rcpp
++LinkingTo: Rcpp
+ Description: Contains procedures for depth-based supervised learning, which are entirely non-parametric, in particular the DDalpha-procedure (Lange, Mosler and Mozharovskyi, 2014). The training data sample is transformed by a statistical depth function to a compact low-dimensional space, where the final classification is done. It also offers an extension to functional data and routines for calculating certain notions of statistical depth functions. 50 multivariate and 5 functional class [...]
+ License: GPL-2
+ NeedsCompilation: yes

-- 
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