[r-cran-vgam] branch master updated (657eedf -> 67a3a36)
Andreas Tille
tille at debian.org
Wed Oct 25 08:03:31 UTC 2017
This is an automated email from the git hooks/post-receive script.
tille pushed a change to branch master
in repository r-cran-vgam.
from 657eedf Standards-Version: 4.1.0 (That's just a rebuild of the package)
new ae704d6 Secure URI in watch file
adds bef068a New upstream version 1.0-4
new 606f015 Updated version 1.0-4 from 'upstream/1.0-4'
new de2b325 New upstream version
new a2eba4a Standards-Version: 4.1.1
new 5f02fb9 Automated adding of debian/README.source to document binary data files
new 2956154 Testsuite: autopkgtest-pkg-r
new 940026e Commit README.source
new 67a3a36 Upload to unstable
The 8 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
DESCRIPTION | 12 +-
MD5 | 262 +++--
NAMESPACE | 29 +-
NEWS | 37 +
R/Links.R | 30 +
R/aamethods.q | 1 +
R/calibrate.R | 850 ++++++++++++++
R/calibrate.q | 352 ------
R/cao.R | 28 +-
R/cao.fit.q | 13 +-
R/cqo.R | 28 +-
R/family.actuary.R | 1 +
R/family.aunivariate.R | 25 +-
R/family.basics.R | 33 +-
R/family.binomial.R | 103 +-
R/family.categorical.R | 320 +++++-
R/family.censored.R | 2 +-
R/family.extremes.R | 2 +-
R/family.functions.R | 2 +-
R/family.glmgam.R | 55 +-
R/family.math.R | 62 +
R/family.nbd.R | 497 ++++++--
R/family.nonlinear.R | 4 +-
R/family.normal.R | 82 +-
R/family.positive.R | 4 +-
R/family.qreg.R | 564 +++++----
R/family.rrr.R | 6 +-
R/family.ts.R | 4 +-
R/family.univariate.R | 1039 ++++++++---------
R/family.zeroinf.R | 439 +++++--
R/formula.vlm.q | 2 +-
R/hdeff.R | 312 +++++
R/links.q | 971 ++++++++++------
R/logLik.vlm.q | 15 +-
R/lrp.R | 175 +++
R/model.matrix.vglm.q | 4 +-
R/mux.q | 86 +-
R/predict.vlm.q | 61 +-
R/print.vglm.q | 20 +
R/rrvglm.R | 28 +-
R/rrvglm.fit.q | 2 +-
R/s.q | 2 +-
R/summary.vglm.q | 47 +-
R/vcov.pvgam.R | 6 +-
R/vgam.R | 34 +-
R/vgam.control.q | 2 +-
R/vglm.R | 34 +-
R/vlm.R | 27 +-
build/vignette.rds | Bin 480 -> 0 bytes
data/Huggins89.t1.rda | Bin 443 -> 443 bytes
data/Huggins89table1.rda | Bin 445 -> 445 bytes
data/alclevels.rda | Bin 550 -> 551 bytes
data/alcoff.rda | Bin 547 -> 548 bytes
data/auuc.rda | Bin 246 -> 246 bytes
data/backPain.rda | Bin 485 -> 476 bytes
data/beggs.rda | Bin 198 -> 198 bytes
data/car.all.rda | Bin 6962 -> 6955 bytes
data/cfibrosis.rda | Bin 264 -> 265 bytes
data/corbet.rda | Bin 245 -> 245 bytes
data/crashbc.rda | Bin 374 -> 374 bytes
data/crashf.rda | Bin 341 -> 340 bytes
data/crashi.rda | Bin 491 -> 491 bytes
data/crashmc.rda | Bin 385 -> 347 bytes
data/crashp.rda | Bin 376 -> 376 bytes
data/crashtr.rda | Bin 361 -> 361 bytes
data/deermice.rda | Bin 393 -> 391 bytes
data/ducklings.rda | Bin 561 -> 561 bytes
data/finney44.rda | Bin 210 -> 210 bytes
data/flourbeetle.rda | Bin 344 -> 344 bytes
data/hspider.rda | Bin 1344 -> 1345 bytes
data/lakeO.rda | Bin 335 -> 336 bytes
data/leukemia.rda | Bin 329 -> 329 bytes
data/marital.nz.rda | Bin 10448 -> 10424 bytes
data/melbmaxtemp.rda | Bin 4264 -> 4268 bytes
data/pneumo.rda | Bin 268 -> 267 bytes
data/prinia.rda | Bin 1229 -> 1229 bytes
data/ruge.rda | Bin 258 -> 258 bytes
data/toxop.rda | Bin 474 -> 473 bytes
data/venice.rda | Bin 986 -> 983 bytes
data/venice90.rda | Bin 8008 -> 8044 bytes
data/wine.rda | Bin 269 -> 270 bytes
debian/README.source | 141 +++
debian/changelog | 11 +
debian/control | 3 +-
debian/create_README.source | 44 +
debian/watch | 2 +-
inst/doc/categoricalVGAM.R | 280 -----
inst/doc/categoricalVGAM.Rnw | 2335 --------------------------------------
inst/doc/categoricalVGAM.pdf | Bin 648348 -> 0 bytes
inst/doc/crVGAM.R | 480 --------
inst/doc/crVGAM.Rnw | 2275 -------------------------------------
inst/doc/crVGAM.pdf | Bin 421558 -> 0 bytes
man/ABO.Rd | 5 +-
man/AR1EIM.Rd | 13 +
man/Links.Rd | 15 +-
man/backPain.Rd | 5 +-
man/binomialff.Rd | 22 +-
man/calibrate-methods.Rd | 4 +-
man/calibrate.Rd | 6 +-
man/calibrate.qrrvglm.Rd | 10 +-
man/calibrate.qrrvglm.control.Rd | 5 +-
man/calibrate.rrvglm.Rd | 140 +++
man/calibrate.rrvglm.control.Rd | 74 ++
man/cao.Rd | 3 +-
man/cens.gumbel.Rd | 4 +-
man/confintvglm.Rd | 4 +-
man/constraints.Rd | 9 +-
man/cqo.Rd | 3 +-
man/cumulative.Rd | 1 +
man/gengamma.Rd | 48 +-
man/gengammaUC.Rd | 26 +-
man/gevUC.Rd | 10 +-
man/hdeff.Rd | 187 +++
man/lms.yjn.Rd | 14 +-
man/lrpvglm.Rd | 156 +++
man/lrtest.Rd | 3 +-
man/multilogit.Rd | 18 +-
man/nakagami.Rd | 10 +-
man/nbcanlink.Rd | 84 +-
man/nbolf.Rd | 4 +-
man/negbinomial.Rd | 37 +-
man/negbinomial.size.Rd | 37 +-
man/notdocumentedyet.Rd | 30 +-
man/poissonff.Rd | 7 +-
man/prentice74.Rd | 25 +-
man/profilevglm.Rd | 98 ++
man/rrvglm.Rd | 4 +-
man/skewnormUC.Rd | 5 +-
man/slash.Rd | 6 +
man/sm.os.Rd | 15 +-
man/summaryvglm.Rd | 45 +-
man/undocumented-methods.Rd | 4 +
man/uninormal.Rd | 3 +-
man/vcovvlm.Rd | 21 +-
man/vgam.Rd | 3 +-
man/vgam.control.Rd | 5 +-
man/vglm.Rd | 17 +-
man/vglmff-class.Rd | 7 +
man/vplot.profile.Rd | 62 +
man/zipoisson.Rd | 3 +-
src/VGAM_init.c | 103 ++
src/gautr.c | 2 +-
src/muxr3.c | 129 ++-
src/veigen.f | 2 +-
vignettes/categoricalVGAM.Rnw | 2335 --------------------------------------
vignettes/categoricalVGAMbib.bib | 696 ------------
vignettes/crVGAM.Rnw | 2275 -------------------------------------
vignettes/crVGAM.bib | 536 ---------
148 files changed, 6049 insertions(+), 13631 deletions(-)
create mode 100644 R/calibrate.R
delete mode 100644 R/calibrate.q
create mode 100644 R/hdeff.R
create mode 100644 R/lrp.R
delete mode 100644 build/vignette.rds
create mode 100644 debian/README.source
create mode 100755 debian/create_README.source
delete mode 100644 inst/doc/categoricalVGAM.R
delete mode 100644 inst/doc/categoricalVGAM.Rnw
delete mode 100644 inst/doc/categoricalVGAM.pdf
delete mode 100644 inst/doc/crVGAM.R
delete mode 100644 inst/doc/crVGAM.Rnw
delete mode 100644 inst/doc/crVGAM.pdf
create mode 100644 man/calibrate.rrvglm.Rd
create mode 100644 man/calibrate.rrvglm.control.Rd
create mode 100644 man/hdeff.Rd
create mode 100644 man/lrpvglm.Rd
create mode 100644 man/profilevglm.Rd
create mode 100644 man/vplot.profile.Rd
create mode 100644 src/VGAM_init.c
delete mode 100644 vignettes/categoricalVGAM.Rnw
delete mode 100644 vignettes/categoricalVGAMbib.bib
delete mode 100644 vignettes/crVGAM.Rnw
delete mode 100644 vignettes/crVGAM.bib
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