[r-cran-bradleyterry2] branch master updated (55374f8 -> ddf16b3)
Sébastien Villemot
sebastien at debian.org
Sat Sep 30 21:12:37 UTC 2017
This is an automated email from the git hooks/post-receive script.
sebastien pushed a change to branch master
in repository r-cran-bradleyterry2.
from 55374f8 Add packaging repository URLs
new f61f30f Convert to dh-r.
new f4c4379 d/watch: bump to file format version 4.
adds 613f483 New upstream version 1.0-8
new c0e9fab Merge tag 'upstream/1.0-8'
new 5beb1d3 d/copyright: use secure URL for Format, fix license short name.
new d4fca71 Add Build-Depends on r-cran-qvcalc.
new 2ef79ed Bump to debhelper compat level 10.
new 530ef67 Use canonical CRAN homepage.
new a583008 Add autopkgtest unit tests.
new 99c6b80 Bump Standards-Version to 4.1.1.
new 57b8d89 Remove unneeded Build-Depends on r-cran-nloptr.
new c4f9649 Add .gitignore.
new 07445d7 Add README.source documenting *.rda files.
new e1a46fa d/rules: workaround for wrong permissions in upstream tarball.
new ddf16b3 Changelog entry for 1.0-8-1.
The 14 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.gitignore | 6 +
DESCRIPTION | 24 +-
MD5 | 152 +--
NAMESPACE | 100 +-
NEWS.md | 176 +++
R/BTabilities.R | 93 +-
R/BTm.R | 185 ++-
R/BTm.setup.R | 4 +-
R/CEMS.R | 161 +++
R/Diff.R | 12 +-
R/GenDavidson.R | 184 ++-
R/add1.BTm.R | 82 +-
R/anova.BTm.R | 89 +-
R/anova.BTmlist.R | 21 +-
R/baseball.R | 47 +
R/chameleons.R | 81 ++
R/citations.R | 42 +
R/countsToBinomial.R | 30 +
R/drop1.BTm.R | 18 +-
R/flatlizards.R | 149 +++
R/football.R | 54 +
R/formula.BTm.R | 1 +
R/glmmPQL.R | 124 +-
R/glmmPQL.control.R | 46 +
R/glmmPQL.fit.R | 43 +-
R/icehockey.R | 111 ++
R/missToZero.R | 0
R/model.frame.BTm.R | 27 -
R/model.matrix.BTm.R | 6 +-
R/plotProportions.R | 178 ++-
R/predict.BTglmmPQL.R | 116 +-
R/predict.BTm.R | 173 ++-
R/print.BTglmmPQL.R | 2 +
R/print.BTm.R | 1 +
R/print.summary.glmmPQL.R | 5 +-
R/qvcalc.BTabilities.R | 82 ++
R/residuals.BTm.R | 54 +
R/seeds.R | 31 +
R/sound.fields.R | 83 ++
R/springall.R | 70 ++
R/summary.BTglmmPQL.R | 2 +
R/vcov.BTglmmPQL.R | 1 +
README | 58 -
README.md | 23 +
build/vignette.rds | Bin 300 -> 302 bytes
data/CEMS.R | 2325 ++++++++++++++++++++++++++++++++++++++
data/CEMS.rda | Bin 8251 -> 0 bytes
data/baseball.RData | Bin
data/chameleons.R | 133 +++
data/chameleons.rda | Bin 2223 -> 0 bytes
data/citations.R | 6 +
data/citations.rda | Bin 242 -> 0 bytes
data/flatlizards.rda | Bin
data/football.RData | Bin
data/icehockey.R | 838 ++++++++++++++
data/icehockey.rda | Bin 8593 -> 0 bytes
data/seeds.R | 10 +
data/seeds.rda | Bin 317 -> 0 bytes
data/sound.fields.R | 64 ++
data/sound.fields.rda | Bin 840 -> 0 bytes
data/springall.R | 32 +
data/springall.rda | Bin 700 -> 0 bytes
debian/README.source | 4 +
debian/changelog | 21 +
debian/compat | 2 +-
debian/control | 19 +-
debian/copyright | 12 +-
debian/r-cran-bradleyterry2.docs | 2 +
debian/rules | 10 +-
debian/tests/control | 5 +
debian/tests/run-unit-test | 17 +
debian/watch | 2 +-
inst/CITATION | 0
inst/NEWS | 143 ---
inst/doc/BradleyTerry.R | 1 +
inst/doc/BradleyTerry.Rnw | 153 ++-
inst/doc/BradleyTerry.pdf | Bin 293093 -> 293128 bytes
man/BTabilities.Rd | 86 +-
man/BTm.Rd | 331 +++---
man/CEMS.Rd | 171 +--
man/GenDavidson.Rd | 187 +--
man/add1.BTm.Rd | 106 +-
man/anova.BTm.Rd | 108 +-
man/baseball.Rd | 68 +-
man/chameleons.Rd | 122 +-
man/citations.Rd | 64 +-
man/countsToBinomial.Rd | 37 +-
man/flatlizards.Rd | 179 +--
man/football.Rd | 64 +-
man/glmmPQL.Rd | 301 +++--
man/glmmPQL.control.Rd | 88 +-
man/icehockey.Rd | 99 +-
man/plotProportions.Rd | 230 ++--
man/predict.BTglmmPQL.Rd | 151 ++-
man/predict.BTm.Rd | 205 ++--
man/qvcalc.BTabilities.Rd | 84 ++
man/reexports.Rd | 16 +
man/residuals.BTm.Rd | 81 +-
man/seeds.Rd | 58 +-
man/sound.fields.Rd | 115 +-
man/springall.Rd | 97 +-
tests/BTabilities.R | 37 +
tests/BTabilities.Rout.save | 114 ++
tests/add1.R | 5 +-
tests/add1.Rout.save | 20 +-
tests/baseball.R | 0
tests/baseball.Rout.save | 0
tests/countsToBinomial.R | 0
tests/countsToBinomial.Rout.save | 0
tests/flatlizards.R | 13 +-
tests/flatlizards.Rout.save | 36 +-
tests/nested.R | 0
tests/nested.Rout.save | 0
tests/predict.R | 102 +-
tests/predict.Rout.save | 167 ++-
vignettes/BradleyTerry.Rnw | 153 ++-
vignettes/BradleyTerry.bib | 0
vignettes/baseball-qvplot.pdf | 0
vignettes/residuals.pdf | 0
119 files changed, 8494 insertions(+), 1947 deletions(-)
create mode 100644 .gitignore
mode change 100644 => 100755 DESCRIPTION
mode change 100644 => 100755 NAMESPACE
create mode 100755 NEWS.md
mode change 100644 => 100755 R/BTm.R
mode change 100644 => 100755 R/BTm.setup.R
create mode 100755 R/CEMS.R
mode change 100644 => 100755 R/Diff.R
mode change 100644 => 100755 R/GenDavidson.R
mode change 100644 => 100755 R/add1.BTm.R
mode change 100644 => 100755 R/anova.BTm.R
mode change 100644 => 100755 R/anova.BTmlist.R
create mode 100755 R/baseball.R
create mode 100755 R/chameleons.R
create mode 100755 R/citations.R
mode change 100644 => 100755 R/countsToBinomial.R
mode change 100644 => 100755 R/drop1.BTm.R
create mode 100755 R/flatlizards.R
create mode 100755 R/football.R
mode change 100644 => 100755 R/formula.BTm.R
mode change 100644 => 100755 R/glmmPQL.R
mode change 100644 => 100755 R/glmmPQL.control.R
mode change 100644 => 100755 R/glmmPQL.fit.R
create mode 100755 R/icehockey.R
mode change 100644 => 100755 R/missToZero.R
delete mode 100644 R/model.frame.BTm.R
mode change 100644 => 100755 R/model.matrix.BTm.R
mode change 100644 => 100755 R/plotProportions.R
mode change 100644 => 100755 R/predict.BTglmmPQL.R
mode change 100644 => 100755 R/predict.BTm.R
mode change 100644 => 100755 R/print.BTglmmPQL.R
mode change 100644 => 100755 R/print.BTm.R
mode change 100644 => 100755 R/print.summary.glmmPQL.R
create mode 100755 R/qvcalc.BTabilities.R
mode change 100644 => 100755 R/residuals.BTm.R
create mode 100755 R/seeds.R
create mode 100755 R/sound.fields.R
create mode 100755 R/springall.R
mode change 100644 => 100755 R/summary.BTglmmPQL.R
mode change 100644 => 100755 R/vcov.BTglmmPQL.R
delete mode 100644 README
create mode 100755 README.md
create mode 100755 data/CEMS.R
delete mode 100644 data/CEMS.rda
mode change 100644 => 100755 data/baseball.RData
create mode 100755 data/chameleons.R
delete mode 100644 data/chameleons.rda
create mode 100755 data/citations.R
delete mode 100644 data/citations.rda
mode change 100644 => 100755 data/flatlizards.rda
mode change 100644 => 100755 data/football.RData
create mode 100755 data/icehockey.R
delete mode 100644 data/icehockey.rda
create mode 100755 data/seeds.R
delete mode 100644 data/seeds.rda
create mode 100755 data/sound.fields.R
delete mode 100644 data/sound.fields.rda
create mode 100755 data/springall.R
delete mode 100644 data/springall.rda
create mode 100644 debian/README.source
create mode 100644 debian/r-cran-bradleyterry2.docs
create mode 100644 debian/tests/control
create mode 100644 debian/tests/run-unit-test
mode change 100644 => 100755 inst/CITATION
delete mode 100644 inst/NEWS
mode change 100644 => 100755 inst/doc/BradleyTerry.Rnw
mode change 100644 => 100755 man/BTabilities.Rd
mode change 100644 => 100755 man/BTm.Rd
mode change 100644 => 100755 man/CEMS.Rd
mode change 100644 => 100755 man/GenDavidson.Rd
mode change 100644 => 100755 man/add1.BTm.Rd
mode change 100644 => 100755 man/anova.BTm.Rd
mode change 100644 => 100755 man/baseball.Rd
mode change 100644 => 100755 man/chameleons.Rd
mode change 100644 => 100755 man/citations.Rd
mode change 100644 => 100755 man/countsToBinomial.Rd
mode change 100644 => 100755 man/flatlizards.Rd
mode change 100644 => 100755 man/football.Rd
mode change 100644 => 100755 man/glmmPQL.Rd
mode change 100644 => 100755 man/glmmPQL.control.Rd
mode change 100644 => 100755 man/icehockey.Rd
mode change 100644 => 100755 man/plotProportions.Rd
mode change 100644 => 100755 man/predict.BTglmmPQL.Rd
mode change 100644 => 100755 man/predict.BTm.Rd
create mode 100755 man/qvcalc.BTabilities.Rd
create mode 100755 man/reexports.Rd
mode change 100644 => 100755 man/residuals.BTm.Rd
mode change 100644 => 100755 man/seeds.Rd
mode change 100644 => 100755 man/sound.fields.Rd
mode change 100644 => 100755 man/springall.Rd
create mode 100755 tests/BTabilities.R
create mode 100755 tests/BTabilities.Rout.save
mode change 100644 => 100755 tests/add1.R
mode change 100644 => 100755 tests/add1.Rout.save
mode change 100644 => 100755 tests/baseball.R
mode change 100644 => 100755 tests/baseball.Rout.save
mode change 100644 => 100755 tests/countsToBinomial.R
mode change 100644 => 100755 tests/countsToBinomial.Rout.save
mode change 100644 => 100755 tests/flatlizards.R
mode change 100644 => 100755 tests/flatlizards.Rout.save
mode change 100644 => 100755 tests/nested.R
mode change 100644 => 100755 tests/nested.Rout.save
mode change 100644 => 100755 tests/predict.R
mode change 100644 => 100755 tests/predict.Rout.save
mode change 100644 => 100755 vignettes/BradleyTerry.Rnw
mode change 100644 => 100755 vignettes/BradleyTerry.bib
mode change 100644 => 100755 vignettes/baseball-qvplot.pdf
mode change 100644 => 100755 vignettes/residuals.pdf
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