[pkg-bioc] Re: Bioconductor Debian packages

[Steffen Moeller]

Dirk Eddelbuettel wrote:

>On 26 July 2005 at 22:02, Faheem Mitha wrote:
>| 
>| 
>| On Wed, 27 Jul 2005, Steffen Moeller wrote:
>| 
>| > Hi Faheem,
>| >
>| > I updated the Packages list after tpday's update. Please try again and
>| > thank you for pointing this out.
>| 
>| There seems to be a bit of a conflict here.
>| 
>| Unpacking r-bioc-limma (from .../r-bioc-limma_1.10.0-0.r2d.1_all.deb) ...
>| dpkg: error processing 
>| /var/cache/apt/archives/r-bioc-limma_1.10.0-0.r2d.1_all.deb (--unpack):
>|   trying to overwrite `/usr/lib/R/site-library/limma/DESCRIPTION', which is 
>| also in package r-cran-limma
>
>The script tries to account for packages appearing in both CRAN and BioC, but
>Limma must have slipped through.
>  
>
Yip. On the other hand I am not certain that this is too bad. Sometimes
the versions differ between CRAN and BIOC. The dependencies are all to
CRAN-limma, aren't they?

Many greetings

Steffen