[pkg-bioc] CVS %p

[David Vernazobres]

On Sun, Apr 29, 2007 at 09:23:05PM +0000, CVS User smoe-guest wrote :
> Update of /cvsroot/pkg-bioc/tools
> In directory alioth:/tmp/cvs-serv6095
> 
> Modified Files:
> 	cran2deb.pl 
> Log Message:
> [cran2deb.pl]
>  * some extra debug info with respect to dependencies declared
>    in the graph, shown when builds fail
>  * added some to cannotbuild
>  * found fortran code in tdm to be non-free
> 
> Hahaha, we have some issue with tcltk under pbuilder:
> 
> make[1]: Leaving directory `/tmp/buildd/analyzefmri-1.1.6/src'
> ** R
> ** inst
> ** preparing package for lazy loading
> Loading required package: tcltk
> Loading Tcl/Tk interface ... Xlib: connection to "localhost:11.0" refused by server
> Xlib: PuTTY X11 proxy: wrong authentication protocol attempted
> Error in fun(...) : couldn't connect to display "localhost:11.0"
> Error : .onLoad failed in 'loadNamespace' for 'tcltk'
> Error: package 'tcltk' could not be loaded
> Execution halted
> ERROR: lazy loading failed for package 'AnalyzeFMRI'
> ** Removing '/tmp/buildd/analyzefmri-1.1.6/debian/r-cran-analyzefmri/usr/lib/R/site-library/AnalyzeFMRI'
> make: *** [R_any_arch] Error 1
> pbuilder: Failed autobuilding of package
> 

Yep, I know, and most of the time, the package is not calling the tcltk,
during operation. Thoses packages are problematic for me, no
automatisation, no screen, no cluster,... I would definitly like a
--batch flag :)
Package with the same behaviour : TeachingDemo.

> Good night!
> 
> If you dear reader of this emails feel sufficiently fresh, still, the
> analyzefmri has multiple separated Depends lines in its DESCRIPTION
> file. This is not parsed properly, tcltk is only in the second Depends
> line and does not show up on the graph.
humm,,....

 
Cheers,
david