[Pkg-emboss-commits] r80 - in emboss/trunk/debian: . manpages

charles-guest at alioth.debian.org charles-guest at alioth.debian.org
Wed Jul 18 10:39:28 UTC 2007 

Author: charles-guest
Date: 2007-07-18 10:39:28 +0000 (Wed, 18 Jul 2007)
New Revision: 80

Added:
   emboss/trunk/debian/manpages/acd2docbook.pl
Removed:
   emboss/trunk/debian/acd2docbook.pl
Modified:
   emboss/trunk/debian/changelog
   emboss/trunk/debian/emboss.manpages
   emboss/trunk/debian/rules
Log:
Moving acd2docbook.pl to make sure that the manpages directory is included

Deleted: emboss/trunk/debian/acd2docbook.pl
===================================================================
--- emboss/trunk/debian/acd2docbook.pl	2007-07-17 16:11:51 UTC (rev 79)
+++ emboss/trunk/debian/acd2docbook.pl	2007-07-18 10:39:28 UTC (rev 80)
@@ -1,171 +0,0 @@
-#!/usr/bin/perl
-
-# acd2docbook.pl was made for Debian by Charles Plessy in 2007, and can be
-# used, modified and redistributed as if it were in the public domain.
-#
-# You can report bugs to bugs.debian.org/emboss, and access the latest version here:
-# http://svn.debian.org/wsvn/pkg-emboss/emboss/trunk/debian/acd2docbook.pl?op=file&rev=0&sc=0
-#
-# Many thanks to David Bauer for the original idea.
-
-use strict;
-use warnings;
-
-use EMBOSS::ACD;
-
-my $acdfile = shift; 
-my $embossversion = shift;
-my $date = qx(822-date);
-chop $date;
-
-my $acd = EMBOSS::ACD->new($acdfile) ;
-
-my $name = $acd->name or die "No name !";
-my $NAME = $name;
-$NAME =~ s/(.)/\U$1/g;
-my $purpose = $acd->documentation;
-my $groups = join(",", $acd->groups);
-
-print <<"__XML__";
-<?xml version='1.0' encoding='ISO-8859-1'?>
-<?xml-stylesheet type="text/xsl"
-	href="http://docbook.sourceforge.net/release/xsl/current/manpages/docbook.xsl"?>
-<!DOCTYPE refentry PUBLIC "-//OASIS//DTD DocBook XML V4.4//EN"
-	"http://www.oasis-open.org/docbook/xml/4.4/docbookx.dtd" [
-
-<!-- Autogenerated by the acd2docbook.pl script from the emboss Debian pacakge.    -->
-<!-- Template from docbook-xsl version 1.72.0.dfsg.1-1                             -->
-
-  <!ENTITY dhemail     "pkg-emboss-devel\@lists.alioth.debian.org">
-  <!ENTITY dhusername  "Debian EMBOSS Packaging Team">
-  <!ENTITY dhrelease   "$embossversion">
-  <!ENTITY dhtitle     "EMBOSS Manual for Debian">
-  <!ENTITY dhucpackage "$NAME">
-  <!ENTITY dhpackage   "$name">
-  <!ENTITY dhproduct   "EMBOSS">
-  <!ENTITY dhsection   "1">
-]>
-
-<refentry>
-	<refentryinfo>
-		<title>&dhtitle;</title>
-		<productname>&dhproduct;</productname>
-		<releaseinfo role="version">&dhrelease;</releaseinfo>
-		<authorgroup>
-			<author>
-				<othername>&dhusername;</othername>
-				<contrib>Wrote the script used to autogenerate this manual page.</contrib>
-				<address>
-					<email>&dhemail;</email>
-				</address>
-			</author>
-		</authorgroup>
-		<copyright>
-			<year>2007</year>
-			<holder>&dhusername;</holder>
-		</copyright>
-		<legalnotice>
-			<para>This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.</para>
-		</legalnotice>
-	</refentryinfo>
-
-	<refmeta>
-		<refentrytitle>&dhucpackage;</refentrytitle>
-		<manvolnum>&dhsection;</manvolnum>
-	</refmeta>
-
-	<refnamediv>
-		<refname>&dhpackage;</refname>
-		<refpurpose>$purpose</refpurpose>
-	</refnamediv>
-
-	<refsynopsisdiv>
-		<cmdsynopsis>
-			<command>&dhpackage;</command>
-__XML__
-
-foreach my $parameter ( $acd->param) {
-	next if $$parameter{datatype} =~ /section/;
-	my ($paraname, $argname, $paratype) = ( $$parameter{name}, $$parameter{datatype}, $$parameter{type} );
-	my $additional = 'choice="plain"';
-	$additional = 'choice="opt"' if $$parameter{additional} eq 'Y';
-	print qq(\t\t\t<arg $additional><option>-$paraname <replaceable>$argname</replaceable></option></arg>\n);
-}
-
-
-print <<"__XML__";
-		</cmdsynopsis>
-		<cmdsynopsis>
-			<command>&dhpackage;</command>
-			<arg choice="plain"><option>-help</option></arg>
-		</cmdsynopsis>
-	</refsynopsisdiv>
-	<refsect1 id="description">
-		<title>DESCRIPTION</title>
-		<para><command>&dhpackage;</command> is a command line program from EMBOSS (<quote>the European Molecular Biology Open Software Suite</quote>). It is part of the "$groups" command group(s). 
-		</para>
-	</refsect1>
-
-	<refsect1 id="options">
-			<!-- Use the variablelist.term.separator and the
-			     variablelist.term.break.after parameters to
-			     control the term elements. -->
-		<title>OPTIONS</title>
-__XML__
-
-foreach my $parameter( $acd->param) {
-
-	# Does a section begin ?
-	if ($$parameter{datatype} eq "section") {
-		print qq(\t\t<refsect2 id="$$parameter{name}">\n\t\t\t<title>$$parameter{information}</title>\n\t\t\t<variablelist>\n);
-		next;
-	}
-
-	# Does a section end ?
-	if ($$parameter{datatype} eq "endsection") {
-		print "\t\t\t</variablelist>\n\t\t</refsect2>\n";
-		next;
-	}
-
-	# Is there a Default value ?
-	my $default;
-	$default = " Default value: $$parameter{default}" if $$parameter{default};
-
-	# Use entities when necessary:
-	$$parameter{help} =~ s/&/&amp;/g ;
-	$$parameter{help} =~ s/</&lt;/g ;
-	$$parameter{help} =~ s/>/&gt;/g ;
-        $default =~ s/&/&amp;/g ;
-        $default =~ s/</&lt;/g ;
-        $default =~ s/>/&gt;/g ;
-
-
-
-	print<<"__XML__";
-				<varlistentry>
-					<term>
-						<option>-$$parameter{name}</option>
-						<parameter>$$parameter{datatype}</parameter>
-					</term>
-					<listitem>
-						<para>$$parameter{help}$default</para>
-					</listitem>
-				</varlistentry>
-__XML__
-}
-
-print<<"__XML__";
-	</refsect1>
-
-	<refsect1 id="bugs">
-		<!-- Or use this section to tell about upstream BTS. -->
-		<title>BUGS</title>
-		<para>Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&amp;atid=605031).</para>
-	</refsect1>
-
-	<refsect1 id="see_also">
-		<title>SEE ALSO</title>
-		<para>&dhpackage; is fully documented via the <citerefentry><refentrytitle>tfm</refentrytitle><manvolnum>1</manvolnum></citerefentry> system.</para>
-	</refsect1>
-</refentry>
-__XML__

Modified: emboss/trunk/debian/changelog
===================================================================
--- emboss/trunk/debian/changelog	2007-07-17 16:11:51 UTC (rev 79)
+++ emboss/trunk/debian/changelog	2007-07-18 10:39:28 UTC (rev 80)
@@ -8,17 +8,11 @@
   * Makes sure that there is a Makefile befor invoking the clean rule.
   * Added /etc/emboss/embossrc.d directory for future modular
     configuration.
-  * Swiched from dpatch to quilt.
-  * Applying latest fixes from ftp://emboss.open-bio.org/pub/EMBOSS/fixes
-    - Solves a display problem with abiview.
-    - Solves a display problem with banana and prettyplot.
-  * Applying a dbiflat.c fix from
-    http://lists.open-bio.org/pipermail/emboss/2007-May/002941.html
-    to inded lowercase IDs in EMBL-formatted databases.
+  * Swiched from dpatch to quilt (no patches for the moment).
   * Build-depend on libemboss-acd-perl to generate manpages with
     acd2docbook.pl, written especially for this package (Closes: #423938).
 
- -- Charles Plessy <charles-debian-nospam at plessy.org>  Wed,  4 Jul 2007 23:54:30 +0900
+ -- Charles Plessy <charles-debian-nospam at plessy.org>  Wed, 18 Jul 2007 19:18:10 +0900
 
 emboss (4.1.0-1) experimental; urgency=low
 

Modified: emboss/trunk/debian/emboss.manpages
===================================================================
--- emboss/trunk/debian/emboss.manpages	2007-07-17 16:11:51 UTC (rev 79)
+++ emboss/trunk/debian/emboss.manpages	2007-07-18 10:39:28 UTC (rev 80)
@@ -1,203 +1 @@
-debian/manpages/aaindexextract.1
-debian/manpages/abiview.1
-debian/manpages/acdc.1
-debian/manpages/acdlog.1
-debian/manpages/acdpretty.1
-debian/manpages/acdtable.1
-debian/manpages/acdtrace.1
-debian/manpages/acdvalid.1
-debian/manpages/ajbad.1
-debian/manpages/ajfeatest.1
-debian/manpages/ajtest.1
-debian/manpages/antigenic.1
-debian/manpages/backtranambig.1
-debian/manpages/backtranseq.1
-debian/manpages/banana.1
-debian/manpages/biosed.1
-debian/manpages/btwisted.1
-debian/manpages/cai.1
-debian/manpages/chaos.1
-debian/manpages/charge.1
-debian/manpages/checktrans.1
-debian/manpages/chips.1
-debian/manpages/cirdna.1
-debian/manpages/codcmp.1
-debian/manpages/codcopy.1
-debian/manpages/coderet.1
-debian/manpages/complex.1
-debian/manpages/compseq.1
-debian/manpages/cons.1
-debian/manpages/corbatest.1
-debian/manpages/cpgplot.1
-debian/manpages/cpgreport.1
-debian/manpages/cusp.1
-debian/manpages/cutgextract.1
-debian/manpages/cutseq.1
-debian/manpages/dan.1
-debian/manpages/dbiblast.1
-debian/manpages/dbifasta.1
-debian/manpages/dbiflat.1
-debian/manpages/dbigcg.1
-debian/manpages/dbxfasta.1
-debian/manpages/dbxflat.1
-debian/manpages/dbxgcg.1
-debian/manpages/dbxstat.1
-debian/manpages/degapseq.1
-debian/manpages/demoalign.1
-debian/manpages/demofeatures.1
-debian/manpages/demolist.1
-debian/manpages/demoreport.1
-debian/manpages/demosequence.1
-debian/manpages/demostring.1
-debian/manpages/demostringnew.1
-debian/manpages/demotable.1
-debian/manpages/descseq.1
-debian/manpages/diffseq.1
-debian/manpages/digest.1
-debian/manpages/distmat.1
-debian/manpages/dotmatcher.1
-debian/manpages/dotpath.1
-debian/manpages/dottup.1
-debian/manpages/dreg.1
-debian/manpages/edialign.1
-debian/manpages/einverted.1
-debian/manpages/embossdata.1
-debian/manpages/embossversion.1
-debian/manpages/emma.1
-debian/manpages/emowse.1
-debian/manpages/entrails.1
-debian/manpages/entret.1
-debian/manpages/epestfind.1
-debian/manpages/eprimer3.1
-debian/manpages/equicktandem.1
-debian/manpages/est2genome.1
-debian/manpages/etandem.1
-debian/manpages/extractalign.1
-debian/manpages/extractfeat.1
-debian/manpages/extractseq.1
-debian/manpages/findkm.1
-debian/manpages/freak.1
-debian/manpages/fuzznuc.1
-debian/manpages/fuzzpro.1
-debian/manpages/fuzztran.1
-debian/manpages/garnier.1
-debian/manpages/geecee.1
-debian/manpages/getorf.1
-debian/manpages/giep.1
-debian/manpages/helixturnhelix.1
-debian/manpages/histogramtest.1
-debian/manpages/hmoment.1
-debian/manpages/iep.1
-debian/manpages/infoalign.1
-debian/manpages/infoseq.1
-debian/manpages/intconv.1
-debian/manpages/isochore.1
-debian/manpages/lindna.1
-debian/manpages/listor.1
-debian/manpages/makenucseq.1
-debian/manpages/makeprotseq.1
-debian/manpages/marscan.1
-debian/manpages/maskfeat.1
-debian/manpages/maskseq.1
-debian/manpages/matcher.1
-debian/manpages/megamerger.1
-debian/manpages/merger.1
-debian/manpages/msbar.1
-debian/manpages/mwcontam.1
-debian/manpages/mwfilter.1
-debian/manpages/needle.1
-debian/manpages/newcoils.1
-debian/manpages/newcpgreport.1
-debian/manpages/newcpgseek.1
-debian/manpages/newseq.1
-debian/manpages/noreturn.1
-debian/manpages/notseq.1
-debian/manpages/nthseq.1
-debian/manpages/octanol.1
-debian/manpages/oddcomp.1
-debian/manpages/origsplitter.1
-debian/manpages/origunion.1
-debian/manpages/palindrome.1
-debian/manpages/pasteseq.1
-debian/manpages/patmatdb.1
-debian/manpages/patmatmotifs.1
-debian/manpages/patmattest.1
-debian/manpages/pepcoil.1
-debian/manpages/pepinfo.1
-debian/manpages/pepnet.1
-debian/manpages/pepstats.1
-debian/manpages/pepwheel.1
-debian/manpages/pepwindow.1
-debian/manpages/pepwindowall.1
-debian/manpages/plotcon.1
-debian/manpages/plotorf.1
-debian/manpages/polydot.1
-debian/manpages/preg.1
-debian/manpages/prettyplot.1
-debian/manpages/prettyseq.1
-debian/manpages/prima.1
-debian/manpages/primers.1
-debian/manpages/primersearch.1
-debian/manpages/printsextract.1
-debian/manpages/profit.1
-debian/manpages/prophecy.1
-debian/manpages/prophet.1
-debian/manpages/prosextract.1
-debian/manpages/pscan.1
-debian/manpages/psiphi.1
-debian/manpages/rebaseextract.1
-debian/manpages/recoder.1
-debian/manpages/redata.1
-debian/manpages/remap.1
-debian/manpages/restover.1
-debian/manpages/restrict.1
-debian/manpages/revseq.1
-debian/manpages/seealso.1
-debian/manpages/seqinfo.1
-debian/manpages/seqmatchall.1
-debian/manpages/seqret.1
-debian/manpages/seqretall.1
-debian/manpages/seqretallfeat.1
-debian/manpages/seqretset.1
-debian/manpages/seqretsingle.1
-debian/manpages/seqretsplit.1
-debian/manpages/seqrettype.1
-debian/manpages/showalign.1
-debian/manpages/showdb.1
-debian/manpages/showfeat.1
-debian/manpages/showorf.1
-debian/manpages/showseq.1
-debian/manpages/shuffleseq.1
-debian/manpages/sigcleave.1
-debian/manpages/silent.1
-debian/manpages/sirna.1
-debian/manpages/sixpack.1
-debian/manpages/skipseq.1
-debian/manpages/splitter.1
-debian/manpages/stretcher.1
-debian/manpages/stssearch.1
-debian/manpages/supermatcher.1
-debian/manpages/syco.1
-debian/manpages/tcode.1
-debian/manpages/testplot.1
-debian/manpages/textsearch.1
-debian/manpages/tfextract.1
-debian/manpages/tfm.1
-debian/manpages/tfscan.1
-debian/manpages/tmap.1
-debian/manpages/tranalign.1
-debian/manpages/transeq.1
-debian/manpages/treetypedisplay.1
-debian/manpages/trimest.1
-debian/manpages/trimseq.1
-debian/manpages/twofeat.1
-debian/manpages/union.1
-debian/manpages/vectorstrip.1
-debian/manpages/water.1
-debian/manpages/whichdb.1
-debian/manpages/wobble.1
-debian/manpages/wordcount.1
-debian/manpages/wordfinder.1
-debian/manpages/wordmatch.1
-debian/manpages/wossname.1
-debian/manpages/yank.1
+This file is autogenerated at build time

Copied: emboss/trunk/debian/manpages/acd2docbook.pl (from rev 78, emboss/trunk/debian/acd2docbook.pl)
===================================================================
--- emboss/trunk/debian/manpages/acd2docbook.pl	                        (rev 0)
+++ emboss/trunk/debian/manpages/acd2docbook.pl	2007-07-18 10:39:28 UTC (rev 80)
@@ -0,0 +1,171 @@
+#!/usr/bin/perl
+
+# acd2docbook.pl was made for Debian by Charles Plessy in 2007, and can be
+# used, modified and redistributed as if it were in the public domain.
+#
+# You can report bugs to bugs.debian.org/emboss, and access the latest version here:
+# http://svn.debian.org/wsvn/pkg-emboss/emboss/trunk/debian/acd2docbook.pl?op=file&rev=0&sc=0
+#
+# Many thanks to David Bauer for the original idea.
+
+use strict;
+use warnings;
+
+use EMBOSS::ACD;
+
+my $acdfile = shift; 
+my $embossversion = shift;
+my $date = qx(822-date);
+chop $date;
+
+my $acd = EMBOSS::ACD->new($acdfile) ;
+
+my $name = $acd->name or die "No name !";
+my $NAME = $name;
+$NAME =~ s/(.)/\U$1/g;
+my $purpose = $acd->documentation;
+my $groups = join(",", $acd->groups);
+
+print <<"__XML__";
+<?xml version='1.0' encoding='ISO-8859-1'?>
+<?xml-stylesheet type="text/xsl"
+	href="http://docbook.sourceforge.net/release/xsl/current/manpages/docbook.xsl"?>
+<!DOCTYPE refentry PUBLIC "-//OASIS//DTD DocBook XML V4.4//EN"
+	"http://www.oasis-open.org/docbook/xml/4.4/docbookx.dtd" [
+
+<!-- Autogenerated by the acd2docbook.pl script from the emboss Debian pacakge.    -->
+<!-- Template from docbook-xsl version 1.72.0.dfsg.1-1                             -->
+
+  <!ENTITY dhemail     "pkg-emboss-devel\@lists.alioth.debian.org">
+  <!ENTITY dhusername  "Debian EMBOSS Packaging Team">
+  <!ENTITY dhrelease   "$embossversion">
+  <!ENTITY dhtitle     "EMBOSS Manual for Debian">
+  <!ENTITY dhucpackage "$NAME">
+  <!ENTITY dhpackage   "$name">
+  <!ENTITY dhproduct   "EMBOSS">
+  <!ENTITY dhsection   "1">
+]>
+
+<refentry>
+	<refentryinfo>
+		<title>&dhtitle;</title>
+		<productname>&dhproduct;</productname>
+		<releaseinfo role="version">&dhrelease;</releaseinfo>
+		<authorgroup>
+			<author>
+				<othername>&dhusername;</othername>
+				<contrib>Wrote the script used to autogenerate this manual page.</contrib>
+				<address>
+					<email>&dhemail;</email>
+				</address>
+			</author>
+		</authorgroup>
+		<copyright>
+			<year>2007</year>
+			<holder>&dhusername;</holder>
+		</copyright>
+		<legalnotice>
+			<para>This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.</para>
+		</legalnotice>
+	</refentryinfo>
+
+	<refmeta>
+		<refentrytitle>&dhucpackage;</refentrytitle>
+		<manvolnum>&dhsection;</manvolnum>
+	</refmeta>
+
+	<refnamediv>
+		<refname>&dhpackage;</refname>
+		<refpurpose>$purpose</refpurpose>
+	</refnamediv>
+
+	<refsynopsisdiv>
+		<cmdsynopsis>
+			<command>&dhpackage;</command>
+__XML__
+
+foreach my $parameter ( $acd->param) {
+	next if $$parameter{datatype} =~ /section/;
+	my ($paraname, $argname, $paratype) = ( $$parameter{name}, $$parameter{datatype}, $$parameter{type} );
+	my $additional = 'choice="plain"';
+	$additional = 'choice="opt"' if $$parameter{additional} eq 'Y';
+	print qq(\t\t\t<arg $additional><option>-$paraname <replaceable>$argname</replaceable></option></arg>\n);
+}
+
+
+print <<"__XML__";
+		</cmdsynopsis>
+		<cmdsynopsis>
+			<command>&dhpackage;</command>
+			<arg choice="plain"><option>-help</option></arg>
+		</cmdsynopsis>
+	</refsynopsisdiv>
+	<refsect1 id="description">
+		<title>DESCRIPTION</title>
+		<para><command>&dhpackage;</command> is a command line program from EMBOSS (<quote>the European Molecular Biology Open Software Suite</quote>). It is part of the "$groups" command group(s). 
+		</para>
+	</refsect1>
+
+	<refsect1 id="options">
+			<!-- Use the variablelist.term.separator and the
+			     variablelist.term.break.after parameters to
+			     control the term elements. -->
+		<title>OPTIONS</title>
+__XML__
+
+foreach my $parameter( $acd->param) {
+
+	# Does a section begin ?
+	if ($$parameter{datatype} eq "section") {
+		print qq(\t\t<refsect2 id="$$parameter{name}">\n\t\t\t<title>$$parameter{information}</title>\n\t\t\t<variablelist>\n);
+		next;
+	}
+
+	# Does a section end ?
+	if ($$parameter{datatype} eq "endsection") {
+		print "\t\t\t</variablelist>\n\t\t</refsect2>\n";
+		next;
+	}
+
+	# Is there a Default value ?
+	my $default;
+	$default = " Default value: $$parameter{default}" if $$parameter{default};
+
+	# Use entities when necessary:
+	$$parameter{help} =~ s/&/&amp;/g ;
+	$$parameter{help} =~ s/</&lt;/g ;
+	$$parameter{help} =~ s/>/&gt;/g ;
+        $default =~ s/&/&amp;/g ;
+        $default =~ s/</&lt;/g ;
+        $default =~ s/>/&gt;/g ;
+
+
+
+	print<<"__XML__";
+				<varlistentry>
+					<term>
+						<option>-$$parameter{name}</option>
+						<parameter>$$parameter{datatype}</parameter>
+					</term>
+					<listitem>
+						<para>$$parameter{help}$default</para>
+					</listitem>
+				</varlistentry>
+__XML__
+}
+
+print<<"__XML__";
+	</refsect1>
+
+	<refsect1 id="bugs">
+		<!-- Or use this section to tell about upstream BTS. -->
+		<title>BUGS</title>
+		<para>Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&amp;atid=605031).</para>
+	</refsect1>
+
+	<refsect1 id="see_also">
+		<title>SEE ALSO</title>
+		<para>&dhpackage; is fully documented via the <citerefentry><refentrytitle>tfm</refentrytitle><manvolnum>1</manvolnum></citerefentry> system.</para>
+	</refsect1>
+</refentry>
+__XML__

Modified: emboss/trunk/debian/rules
===================================================================
--- emboss/trunk/debian/rules	2007-07-17 16:11:51 UTC (rev 79)
+++ emboss/trunk/debian/rules	2007-07-18 10:39:28 UTC (rev 80)
@@ -24,7 +24,7 @@
 manpages-stamp:
 	if [ -f debian/emboss.manpages ] ; then rm debian/emboss.manpages ; fi
 	for acd in $(shell ls emboss/acd/*acd | sed -r 's#.*/.*/(.+).acd#\1#'); \
-		do perl debian/acd2docbook.pl emboss/acd/$$acd.acd $(VERSION) > debian/manpages/$$acd.xml ;\
+		do perl debian/manpages/acd2docbook.pl emboss/acd/$$acd.acd $(VERSION) > debian/manpages/$$acd.xml ;\
 		xsltproc --nonet --param man.charmap.use.subset 0 -o debian/manpages/ debian/manpages/$$acd.xml ;\
 		echo "debian/manpages/$$acd.1" >> debian/emboss.manpages ;\
 		done
@@ -71,7 +71,7 @@
 	mv $(CURDIR)/debian/emboss_tmp/usr/bin/* $(CURDIR)/debian/emboss_tmp/usr/lib/emboss
 	cd $(CURDIR)/debian/emboss_tmp/usr/lib/emboss/ ; \
 		for i in * ; \
-		do ln -sf ../../lib/emboss/$$i ../../bin/$$i ; \
+		do ln -sf ../lib/emboss/$$i ../../bin/$$i ; \
 		done
 	for i in $(RENAMED) ; \
 		do mv $(CURDIR)/debian/emboss_tmp/usr/bin/$$i $(CURDIR)/debian/emboss_tmp/usr/bin/em_$$i ; \

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