[Pkg-exppsy-maintainers] Bug#577898: nipy: FTBFS: ValueError: >>> from numpy import asarray is not a item name

[Lucas Nussbaum]

Source: nipy
Version: 0.1.2+1741-2.2
Severity: serious
Tags: squeeze sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20100415 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part:
> make[1]: Entering directory `/build/user-nipy_0.1.2+1741-2.2-amd64-KW7WdU/nipy-0.1.2+1741/doc'
> python ../tools/build_modref_templates.py
> WARNING: Empty - nipy
> WARNING: Empty - nipy.algorithms
> WARNING: Empty - nipy.algorithms.regression
> WARNING: Empty - nipy.algorithms.statistics
> WARNING: Empty - nipy.core
> WARNING: Empty - nipy.core.api
> WARNING: Empty - nipy.core.image
> WARNING: Empty - nipy.core.reference
> WARNING: Empty - nipy.core.transforms
> WARNING: Empty - nipy.io
> WARNING: Empty - nipy.io.api
> WARNING: Empty - nipy.modalities
> WARNING: Empty - nipy.modalities.fmri
> WARNING: Empty - nipy.modalities.fmri.api
> WARNING: Empty - nipy.modalities.fmri.fmristat
> WARNING: Empty - nipy.modalities.fmri.fmristat.api
> WARNING: Empty - nipy.neurospin
> WARNING: Empty - nipy.neurospin.bindings
> WARNING: Empty - nipy.neurospin.clustering
> WARNING: Empty - nipy.neurospin.eda
> WARNING: Empty - nipy.neurospin.glm
> WARNING: Empty - nipy.neurospin.graph
> WARNING: Empty - nipy.neurospin.group
> WARNING: Empty - nipy.neurospin.group.onesample
> WARNING: Empty - nipy.neurospin.group.twosample
> WARNING: Empty - nipy.neurospin.neuro
> WARNING: Empty - nipy.neurospin.neuro.fmri
> WARNING: Empty - nipy.neurospin.registration
> WARNING: Empty - nipy.neurospin.scripts
> WARNING: Empty - nipy.neurospin.scripts.compute_mask_intra
> WARNING: Empty - nipy.neurospin.spatial_models
> WARNING: Empty - nipy.neurospin.utils
> WARNING: Empty - nipy.testing
> WARNING: Empty - nipy.utils
> WARNING: Empty - nipy.version
> 78 files written
> Build API docs finished.
> mkdir -p build/html build/doctrees
> sphinx-build -b html -d build/doctrees   . build/html
> Running Sphinx v0.6.5
> WARNING: extension 'ipython_console_highlighting' has no setup() function; is it really a Sphinx extension module?
> loading pickled environment... not found
> building [html]: targets for 147 source files that are out of date
> updating environment: 147 added, 0 changed, 0 removed
> reading sources... [  0%] about
> reading sources... [  1%] api/generated/gen
> reading sources... [  2%] api/generated/nipy.algorithms.fwhm
> reading sources... [  2%] api/generated/nipy.algorithms.interpolation
> reading sources... [  3%] api/generated/nipy.algorithms.kernel_smooth
> reading sources... [  4%] api/generated/nipy.algorithms.resample
> reading sources... [  4%] api/generated/nipy.algorithms.statistics.classification
> reading sources... [  5%] api/generated/nipy.algorithms.statistics.nlsmodel
> reading sources... [  6%] api/generated/nipy.algorithms.statistics.onesample
> reading sources... [  6%] api/generated/nipy.algorithms.statistics.regression
> reading sources... [  7%] api/generated/nipy.algorithms.statistics.rft
> /build/user-nipy_0.1.2+1741-2.2-amd64-KW7WdU/nipy-0.1.2+1741/doc/sphinxext/docscrape.py:117: UserWarning: Unknown section Example
>   warn("Unknown section %s" % key)
> /build/user-nipy_0.1.2+1741-2.2-amd64-KW7WdU/nipy-0.1.2+1741/doc/sphinxext/docscrape.py:117: UserWarning: Unknown section N!
>   warn("Unknown section %s" % key)
> reading sources... [  8%] api/generated/nipy.algorithms.statistics.utils
> /build/user-nipy_0.1.2+1741-2.2-amd64-KW7WdU/nipy-0.1.2+1741/doc/sphinxext/docscrape.py:117: UserWarning: Unknown section Inputs:
>   warn("Unknown section %s" % key)
> /build/user-nipy_0.1.2+1741-2.2-amd64-KW7WdU/nipy-0.1.2+1741/doc/sphinxext/docscrape.py:117: UserWarning: Unknown section Outputs:
>   warn("Unknown section %s" % key)
> reading sources... [  8%] api/generated/nipy.core.image.generators
> reading sources... [  9%] api/generated/nipy.core.image.image
> reading sources... [ 10%] api/generated/nipy.core.image.image_list
> reading sources... [ 10%] api/generated/nipy.core.image.roi
> reading sources... [ 11%] api/generated/nipy.core.reference.array_coords
> reading sources... [ 12%] api/generated/nipy.core.reference.coordinate_map
> /build/user-nipy_0.1.2+1741-2.2-amd64-KW7WdU/nipy-0.1.2+1741/doc/sphinxext/docscrape.py:117: UserWarning: Unknown section Returns:
>   warn("Unknown section %s" % key)
> reading sources... [ 12%] api/generated/nipy.core.reference.coordinate_system
> reading sources... [ 13%] api/generated/nipy.core.reference.slices
> reading sources... [ 14%] api/generated/nipy.core.transforms.affines
> reading sources... [ 14%] api/generated/nipy.io.datasource
> reading sources... [ 15%] api/generated/nipy.io.files
> reading sources... [ 16%] api/generated/nipy.io.nifti_ref
> /build/user-nipy_0.1.2+1741-2.2-amd64-KW7WdU/nipy-0.1.2+1741/doc/sphinxext/docscrape.py:117: UserWarning: Unknown section Notes:
>   warn("Unknown section %s" % key)
> reading sources... [ 17%] api/generated/nipy.io.pyniftiio
> reading sources... [ 17%] api/generated/nipy.modalities.fmri.filters
> reading sources... [ 18%] api/generated/nipy.modalities.fmri.fmri
> 
> Exception occurred:
>   File "/build/user-nipy_0.1.2+1741-2.2-amd64-KW7WdU/nipy-0.1.2+1741/doc/sphinxext/docscrape.py", line 208, in parse_item_name
>     raise ValueError("%s is not a item name" % text)
> ValueError: >>> from numpy import asarray is not a item name
> The full traceback has been saved in /tmp/sphinx-err-YtDL2h.log, if you want to report the issue to the developers.
> Please also report this if it was a user error, so that a better error message can be provided next time.
> Either send bugs to the mailing list at <http://groups.google.com/group/sphinx-dev/>,
> or report them in the tracker at <http://bitbucket.org/birkenfeld/sphinx/issues/>. Thanks!
> make[1]: *** [htmlonly] Error 1

The full build log is available from:
   http://people.debian.org/~lucas/logs/2010/04/15/nipy_0.1.2+1741-2.2_lsid64.buildlog

A list of current common problems and possible solutions is available at 
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot.  Internet was not
accessible from the build systems.

-- 
| Lucas Nussbaum
| lucas at lucas-nussbaum.net   http://www.lucas-nussbaum.net/ |
| jabber: lucas at nussbaum.fr             GPG: 1024D/023B3F4F |