[SCM] read SAM/BAM nucleotide sequence aligment database files branch, meta, updated. meta/1.31-1-2-gc5d3743
Charles Plessy
plessy at debian.org
Wed Nov 23 07:52:39 UTC 2011
The following commit has been merged in the meta branch:
commit c5d3743f4ef4935c08e349e866681336e8f6ac39
Author: Charles Plessy <plessy at debian.org>
Date: Wed Nov 23 16:50:19 2011 +0900
Build logs for 1.32-1.
diff --git a/amd64.changes b/amd64.changes
index ddbfb62..757ade6 100644
--- a/amd64.changes
+++ b/amd64.changes
@@ -2,11 +2,11 @@
Hash: SHA256
Format: 1.8
-Date: Tue, 01 Nov 2011 19:22:49 +0900
+Date: Wed, 23 Nov 2011 16:26:32 +0900
Source: libbio-samtools-perl
Binary: libbio-samtools-perl
Architecture: source amd64
-Version: 1.31-1
+Version: 1.32-1
Distribution: unstable
Urgency: low
Maintainer: Debian Perl Group <pkg-perl-maintainers at lists.alioth.debian.org>
@@ -14,43 +14,40 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
libbio-samtools-perl - read SAM/BAM nucleotide sequence aligment database files
Changes:
- libbio-samtools-perl (1.31-1) unstable; urgency=low
+ libbio-samtools-perl (1.32-1) unstable; urgency=low
.
- [abb8487] New upstream release 1.31
- [e222e9f] New upstream release 1.30
- [5d83169] Normalised debian/copyright by loading and saving it with
- config-edit.
- [de38fdb] Include 7 digits of the commit id in the changelog enty.
+ [36ac64b] New upstream release.
+ [dfb9312] Depend on BioPerl 1.6.901, following Upstream.
Checksums-Sha1:
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- 7d6440c149f1964e3efe590664e0767d425a1355 332207 libbio-samtools-perl_1.31.orig.tar.gz
- 2ef89307cf90e9a780c67964a942fd279b451423 7012 libbio-samtools-perl_1.31-1.debian.tar.gz
- 27f6cfbce3caa4437bfa3235611538c86359b92c 218346 libbio-samtools-perl_1.31-1_amd64.deb
+ 1662673b79e048fb4946c076e3775ee565739af1 2168 libbio-samtools-perl_1.32-1.dsc
+ 0e5e1079ae4b2dda11bc8efac1532b7f77a12663 332281 libbio-samtools-perl_1.32.orig.tar.gz
+ ac6d745665cb500a0d42e48ddc1811fdd1a84901 7084 libbio-samtools-perl_1.32-1.debian.tar.gz
+ d4bb121221195004e586b9de7398d99d5fe9b4dd 208154 libbio-samtools-perl_1.32-1_amd64.deb
Checksums-Sha256:
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- 88796e1fa53bcc9814e20222770f9c6696f27917b4c0f5ebee455da8212c19dd 7012 libbio-samtools-perl_1.31-1.debian.tar.gz
- a3bf204866c184a22037fec46dbde53a12c9ecd5f607c86f11d6309e521e89b1 218346 libbio-samtools-perl_1.31-1_amd64.deb
+ 998ece6212dcf2127d7260d50273b7863ecc0120244ca2d06bcb4cb9643786d4 2168 libbio-samtools-perl_1.32-1.dsc
+ eba805d238daac4af796ba2273da4eb8692bf36fbd840093bd93efb5584ea299 332281 libbio-samtools-perl_1.32.orig.tar.gz
+ a58210827f8f5c4670928630e5b668045b0ea9eae7476471a2c593977d1f7fc3 7084 libbio-samtools-perl_1.32-1.debian.tar.gz
+ 44296d2eeb0e2db400ad50d6bda99287d567e3031e6681d35666f0df85d6e712 208154 libbio-samtools-perl_1.32-1_amd64.deb
Files:
- 7a8206880baffad27c53a5b1b57b74d5 2164 perl optional libbio-samtools-perl_1.31-1.dsc
- d19ccb747abcb1a3a078b769412f6bbb 332207 perl optional libbio-samtools-perl_1.31.orig.tar.gz
- fe3b24c925489ad0c2e23f9e937561cc 7012 perl optional libbio-samtools-perl_1.31-1.debian.tar.gz
- 57a4bc63655b5f3f7150d819f9863b7d 218346 perl optional libbio-samtools-perl_1.31-1_amd64.deb
+ 20ed15a174e1a7e4f3390e2bfae2d438 2168 perl optional libbio-samtools-perl_1.32-1.dsc
+ 566f8eb1a84856da3e524b32f3edfd47 332281 perl optional libbio-samtools-perl_1.32.orig.tar.gz
+ 4570cb3b9a7b65d1bdf83b2cf11d2870 7084 perl optional libbio-samtools-perl_1.32-1.debian.tar.gz
+ 1078d51844a57e10b03442e1b08b6c74 208154 perl optional libbio-samtools-perl_1.32-1_amd64.deb
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diff --git a/amd64.log b/amd64.log
index 72d7ec8..ee1076d 100644
--- a/amd64.log
+++ b/amd64.log
@@ -1,178 +1,83 @@
-From buildd at brahms.debian.org Tue Nov 15 00:32:49 2011
-Return-path: <buildd at brahms.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
- from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
- by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at brahms.debian.org>)
- id 1RQ6xF-0004oj-K9
- for logs at buildd.debian.org; Tue, 15 Nov 2011 00:32:49 +0000
-Received: from brahms.debian.org ([2607:f8f0:610:4000:216:36ff:fe40:3802])
- from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=brahms.debian.org, EMAIL=hostmaster at brahms.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at brahms.debian.org>)
- id 1RQ6xE-0005TW-IB
- for logs at buildd.debian.org; Tue, 15 Nov 2011 00:32:48 +0000
-Received: from buildd by brahms.debian.org with local (Exim 4.72)
- (envelope-from <buildd at brahms.debian.org>)
- id 1RQ6xC-0005fy-RB; Tue, 15 Nov 2011 00:32:46 +0000
-Message-Id: <E1RQ6xC-0005fy-RB at brahms.debian.org>
-MIME-Version: 1.0
-Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Tue, 15 Nov 2011 00:32:46 +0000
-From: buildd on brahms <buildd at brahms.debian.org>
-To: logs at buildd.debian.org,buildd-admin at brahms.debian.org
-Subject: Log for successful build of libbio-samtools-perl_1.31-1+b1 on amd64
- (dist=sid)
-Key-Id: 037769A2
-Delivered-To: logs at buildd.debian.org
-
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on brahms.debian.org
+sbuild (Debian sbuild) 0.62.5 (13 Jul 2011) on anx191
╔══════════════════════════════════════════════════════════════════════════════╗
-║ libbio-samtools-perl 1.31-1+b1 (amd64) 15 Nov 2011 00:31 ║
+║ libbio-samtools-perl 1.32-1 (amd64) 23 Nov 2011 16:32 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: libbio-samtools-perl
-Version: 1.31-1+b1
-Source Version: 1.31-1
+Version: 1.32-1
+Source Version: 1.32-1
+Distribution: unstable
Architecture: amd64
-Hit http://mirrors.ece.ubc.ca sid InRelease
-Hit http://mirrors.ece.ubc.ca sid/main Sources/DiffIndex
-Hit http://mirrors.ece.ubc.ca sid/contrib Sources/DiffIndex
-Hit http://mirrors.ece.ubc.ca sid/main amd64 Packages/DiffIndex
-Hit http://mirrors.ece.ubc.ca sid/contrib amd64 Packages/DiffIndex
-Ign http://mirrors.ece.ubc.ca sid/contrib TranslationIndex
-Hit http://mirrors.ece.ubc.ca sid/main TranslationIndex
-Hit http://incoming.debian.org sid InRelease
-Ign http://incoming.debian.org InRelease
-Ign http://mirrors.ece.ubc.ca sid/contrib Translation-en
-Hit http://incoming.debian.org Release.gpg
-Hit http://incoming.debian.org sid/main Sources/DiffIndex
-Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
-Hit http://incoming.debian.org sid/main amd64 Packages/DiffIndex
-Hit http://incoming.debian.org sid/contrib amd64 Packages/DiffIndex
-Ign http://incoming.debian.org sid/contrib TranslationIndex
-Hit http://incoming.debian.org sid/main TranslationIndex
-Hit http://incoming.debian.org Release
-Hit http://incoming.debian.org Sources
-Hit http://incoming.debian.org Packages
-Ign http://incoming.debian.org sid/contrib Translation-en
-Ign http://incoming.debian.org Translation-en
+
+I: NOTICE: Log filtering will replace 'build/libbio-samtools-perl-7hujaQ/libbio-samtools-perl-1.32' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/libbio-samtools-perl-7hujaQ' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-amd64-sbuild-bd70c3c0-bc26-4798-ae04-226ba7ea3e00' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Hit http://ftp.jp.debian.org sid InRelease
+Hit http://ftp.jp.debian.org sid/main amd64 Packages/DiffIndex
+Hit http://ftp.jp.debian.org sid/main TranslationIndex
+Reading package lists...
Reading package lists...
+Building dependency tree...
+Reading state information...
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
└──────────────────────────────────────────────────────────────────────────────┘
-Check APT
-─────────
-
-Checking available source versions...
+Local sources
+─────────────
-Download source files with APT
-──────────────────────────────
-
-Reading package lists...
-Building dependency tree...
-Reading state information...
-NOTICE: 'libbio-samtools-perl' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/pkg-perl/packages/libbio-samtools-perl.git
-Need to get 341 kB of source archives.
-Get:1 http://mirrors.ece.ubc.ca/debian/ sid/main libbio-samtools-perl 1.31-1 (dsc) [2164 B]
-Get:2 http://mirrors.ece.ubc.ca/debian/ sid/main libbio-samtools-perl 1.31-1 (tar) [332 kB]
-Get:3 http://mirrors.ece.ubc.ca/debian/ sid/main libbio-samtools-perl 1.31-1 (diff) [7012 B]
-Fetched 341 kB in 0s (724 kB/s)
-Download complete and in download only mode
+libbio-samtools-perl_1.32-1.dsc exists in .; copying to chroot
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-M1FXb5/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.5)
-fakeroot: already installed (1.18.1-1)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
+sbuild-build-depends-core-dummy is already the newest version.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
-Removing negative dependencies:
+Merged Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), libmodule-build-perl, perl-modules, perl (>= 5.8), zlib1g-dev, libbam-dev (>= 0.1.16-1~), libbio-perl-perl (>= 1.6.901)
+Filtered Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), libmodule-build-perl, perl-modules, perl (>= 5.8), zlib1g-dev, libbam-dev (>= 0.1.16-1~), libbio-perl-perl (>= 1.6.901)
+dpkg-deb: building package `sbuild-build-depends-libbio-samtools-perl-dummy' in `/«BUILDDIR»/resolver-1_87rb/apt_archive/sbuild-build-depends-libbio-samtools-perl-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install libbio-samtools-perl build dependencies (internal resolver) │
+│ Install libbio-samtools-perl build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), perl (>= 5.14), debhelper (>= 8), libmodule-build-perl, perl-modules, perl (>= 5.8), zlib1g-dev, libbam-dev (>= 0.1.16-1~), libbio-perl-perl (>= 1.6)
-Checking for already installed dependencies...
-base-files: already installed (6.5)
-base-passwd: already installed (3.5.23)
-bash: already installed (4.1-3)
-coreutils: already installed (8.13-3)
-dash: already installed (0.5.7-2)
-debianutils: already installed (4.0.4)
-diffutils: already installed (1:3.2-1)
-dpkg: already installed (1.16.1.1)
-e2fsprogs: already installed (1.42~WIP-2011-10-16-1)
-findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.9-2)
-gzip: already installed (1.4-2)
-hostname: already installed (3.06)
-ncurses-base: already installed (5.9-4)
-ncurses-bin: already installed (5.9-4)
-perl-base: already installed (5.14.2-3)
-sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.13)
-sysvinit: already installed (2.88dsf-13.13)
-tar: already installed (1.26-3)
-bsdutils: already installed (1:2.19.1-5)
-mount: already installed (2.19.1-5)
-util-linux: already installed (2.19.1-5)
-libc6-dev: already installed (2.13-21)
-gcc: already installed (4:4.6.1-3 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.1-3 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.1.1 >= 1.13.5 is satisfied)
-perl: already installed (5.14.2-3 >= 5.14 is satisfied)
-debhelper: missing
-Using default version 8.9.9
-libmodule-build-perl: already installed (~*=PROVIDED=*=)
-perl-modules: already installed (5.14.2-3)
-perl: already installed (5.14.2-3 >= 5.8 is satisfied)
-zlib1g-dev: missing
-libbam-dev: missing
-Using default version 0.1.18-1
-libbio-perl-perl: missing
-Using default version 1.6.901-1
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper zlib1g-dev libbam-dev libbio-perl-perl
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils file gettext gettext-base groff-base html2text intltool-debian
- libcroco3 libdata-stag-perl libglib2.0-0 libio-string-perl libmagic1
- libpcre3 libpipeline1 libunistring0 libxml2 man-db po-debconf
+ debhelper file gettext gettext-base groff-base html2text intltool-debian
+ libbam-dev libbio-perl-perl libcroco3 libdata-stag-perl libffi5 libglib2.0-0
+ libio-string-perl libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
+ man-db po-debconf zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation dh-make gettext-doc groff bioperl
- libmath-random-perl libxml-sax-expatxs-perl less www-browser
- libmail-box-perl
+ dh-make gettext-doc groff bioperl libmath-random-perl
+ libxml-sax-expatxs-perl less www-browser libmail-box-perl
Recommended packages:
curl wget lynx-cur autopoint bioperl-run libbio-perl-run-perl libace-perl
libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl
@@ -187,34 +92,29 @@ Recommended packages:
libgd-gd2-noxpm-perl libxml-libxslt-perl libmldbm-perl libglib2.0-data
shared-mime-info xml-core libmail-sendmail-perl
The following NEW packages will be installed:
- bsdmainutils debhelper file gettext gettext-base groff-base html2text
- intltool-debian libbam-dev libbio-perl-perl libcroco3 libdata-stag-perl
- libglib2.0-0 libio-string-perl libmagic1 libpcre3 libpipeline1 libunistring0
- libxml2 man-db po-debconf zlib1g-dev
-0 upgraded, 22 newly installed, 0 to remove and 0 not upgraded.
-Need to get 6823 kB/16.2 MB of archives.
-After this operation, 46.8 MB of additional disk space will be used.
-Get:1 http://mirrors.ece.ubc.ca/debian/ sid/main libbam-dev amd64 0.1.18-1 [154 kB]
-Get:2 http://mirrors.ece.ubc.ca/debian/ sid/main libio-string-perl all 1.08-2 [12.0 kB]
-Get:3 http://mirrors.ece.ubc.ca/debian/ sid/main libdata-stag-perl all 0.11-2 [509 kB]
-Get:4 http://mirrors.ece.ubc.ca/debian/ sid/main libbio-perl-perl all 1.6.901-1 [6148 kB]
+ debhelper file gettext gettext-base groff-base html2text intltool-debian
+ libbam-dev libbio-perl-perl libcroco3 libdata-stag-perl libffi5 libglib2.0-0
+ libio-string-perl libmagic1 libpcre3 libpipeline1 libunistring0 libxml2
+ man-db po-debconf sbuild-build-depends-libbio-samtools-perl-dummy zlib1g-dev
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 6823 kB in 0s (14.1 MB/s)
+0 upgraded, 23 newly installed, 0 to remove and 0 not upgraded.
+Need to get 0 B/16.2 MB of archives.
+After this operation, 46.4 MB of additional disk space will be used.
Selecting previously unselected package libpipeline1.
-(Reading database ... 10741 files and directories currently installed.)
+(Reading database ... 10825 files and directories currently installed.)
Unpacking libpipeline1 (from .../libpipeline1_1.2.0-5_amd64.deb) ...
Selecting previously unselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-4_amd64.deb) ...
+Selecting previously unselected package libffi5.
+Unpacking libffi5 (from .../libffi5_3.0.10-3_amd64.deb) ...
Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.8-1_amd64.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-4_amd64.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-5_amd64.deb) ...
Selecting previously unselected package libcroco3.
Unpacking libcroco3 (from .../libcroco3_0.6.2-2_amd64.deb) ...
Selecting previously unselected package libunistring0.
Unpacking libunistring0 (from .../libunistring0_0.9.3-5_amd64.deb) ...
-Selecting previously unselected package bsdmainutils.
-Unpacking bsdmainutils (from .../bsdmainutils_8.2.3_amd64.deb) ...
Selecting previously unselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-6_amd64.deb) ...
Selecting previously unselected package man-db.
@@ -234,7 +134,7 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.9.9_all.deb) ...
+Unpacking debhelper (from .../debhelper_8.9.11_all.deb) ...
Selecting previously unselected package libbam-dev.
Unpacking libbam-dev (from .../libbam-dev_0.1.18-1_amd64.deb) ...
Selecting previously unselected package libio-string-perl.
@@ -245,16 +145,16 @@ Selecting previously unselected package libbio-perl-perl.
Unpacking libbio-perl-perl (from .../libbio-perl-perl_1.6.901-1_all.deb) ...
Selecting previously unselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_amd64.deb) ...
+Selecting previously unselected package sbuild-build-depends-libbio-samtools-perl-dummy.
+Unpacking sbuild-build-depends-libbio-samtools-perl-dummy (from .../sbuild-build-depends-libbio-samtools-perl-dummy.deb) ...
Setting up libpipeline1 (1.2.0-5) ...
Setting up libpcre3 (8.12-4) ...
-Setting up libglib2.0-0 (2.28.8-1) ...
+Setting up libffi5 (3.0.10-3) ...
+Setting up libglib2.0-0 (2.30.2-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-5) ...
Setting up libcroco3 (0.6.2-2) ...
Setting up libunistring0 (0.9.3-5) ...
-Setting up bsdmainutils (8.2.3) ...
-update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
-update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
Setting up groff-base (1.21-6) ...
Setting up man-db (2.6.0.2-3) ...
Building database of manual pages ...
@@ -265,21 +165,21 @@ Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.9.9) ...
+Setting up debhelper (8.9.11) ...
Setting up libbam-dev (0.1.18-1) ...
Setting up libio-string-perl (1.08-2) ...
Setting up libdata-stag-perl (0.11-2) ...
Setting up libbio-perl-perl (1.6.901-1) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
-Checking correctness of dependencies...
-Kernel: Linux 2.6.32-5-amd64 amd64 (x86_64)
-Toolchain package versions: binutils_2.21.90.20111025-1 dpkg-dev_1.16.1.1 g++-4.6_4.6.2-4 gcc-4.6_4.6.2-4 libc6-dev_2.13-21 libstdc++6_4.6.2-4 libstdc++6-4.6-dev_4.6.2-4 linux-libc-dev_3.1.1-1
-Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binutils_2.21.90.20111025-1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.5-7 coreutils_8.13-3 cpp_4:4.6.1-3 cpp-4.6_4.6.2-4 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_8.9.9 debian-archive-keyring_2010.08.28 debianutils_4.0.4 diffutils_1:3.2-1 dpkg_1.16.1.1 dpkg-dev_1.16.1.1 e2fslibs_1.42~WIP-2011-10-16-1 e2fsprogs_1.42~WIP-2011-10-16-1 fakeroot_1.18.1-1 file_5.09-2 findutils_4.4.2-1+b1 g++_4:4.6.1-3 g++-4.6_4.6.2-4 gcc_4:4.6.1-3 gcc-4.6_4.6.2-4 gcc-4.6-base_4.6.2-4 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-6 gzip_1.4-2 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.13 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-4 libattr1_1:2.4.46-3 libbam-dev_0.1.18-1 libbio-perl-perl_1.6.901-1 libblkid1_2.19.1-5 libbz2-1.0_1.0.5-7 libc-bin_2.13-21 libc-dev-bin_2.13-21 libc6_2.13-21 libc6-dev_2.13-21 libclass-isa-perl_0.36-2 libcomerr2_1.42~WIP-2011-10-16-1 libcroco3_0.6.2-2 libdata-stag-perl_0.11-2 libdb5.1_5.1.25-11 libdpkg-perl_1.16.1.1 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-4 libgdbm3_1.8.3-10 libglib2.0-0_2.28.8-1 libgmp10_2:5.0.2+dfsg-2 libgomp1_4.6.2-4 libio-string-perl_1.08-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.09-2 libmount1_2.19.1-5 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libpam-modules_1.1.3-6 libpam-modules-bin_1.1.3-6 libpam-runtime_1.1.3-6 libpam0g_1.1.3-6 libpcre3_8.12-4 libpipeline1_1.2.0-5 libquadmath0_4.6.2-4 libreadline6_6.2-7 libselinux1_2.1.0-4 libsepol1_2.1.0-1.1 libslang2_2.2.4-3 libss2_1.42~WIP-2011-10-16-1 libstdc++6_4.6.2-4 libstdc++6-4.6-dev_4.6.2-4 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-19 libuuid1_2.19.1-5 libxml2_2.7.8.dfsg-5 linux-libc-dev_3.1.1-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-3 mawk_1.3.3-16 mount_2.19.1-5 multiarch-support_2.13-21 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.14.2-3 perl-base_5.14.2-3 perl-modules_5.14.2-3 po-debconf_1.0.16+nmu1 readline-common_6.2-7 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p1-2 sysv-rc_2.88dsf-13.13 sysvinit_2.88dsf-13.13 sysvinit-utils_2.88dsf-13.13 tar_1.26-3 tzdata_2011n-1 util-linux_2.19.1-5 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Setting up sbuild-build-depends-libbio-samtools-perl-dummy (0.invalid.0) ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: Linux 2.6.39-bpo.2-amd64 amd64 (x86_64)
+Toolchain package versions: binutils_2.22-1 dpkg-dev_1.16.1.1 g++-4.6_4.6.2-5 gcc-4.6_4.6.2-5 libc6-dev_2.13-21 libstdc++6_4.6.2-5 libstdc++6-4.6-dev_4.6.2-5 linux-libc-dev_3.1.1-1
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binutils_2.22-1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.5-7 coreutils_8.13-3 cpp_4:4.6.1-3 cpp-4.6_4.6.2-5 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_8.9.11 debian-archive-keyring_2010.08.28 debianutils_4.0.4 diffutils_1:3.2-1 dpkg_1.16.1.1 dpkg-dev_1.16.1.1 e2fslibs_1.42~WIP-2011-11-20-1 e2fsprogs_1.42~WIP-2011-11-20-1 fakeroot_1.18.1-1 file_5.09-2 findutils_4.4.2-1+b1 g++_4:4.6.1-3 g++-4.6_4.6.2-5 gcc_4:4.6.1-3 gcc-4.6_4.6.2-5 gcc-4.6-base_4.6.2-5 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-6 gzip_1.4-2 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.13 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-4 libattr1_1:2.4.46-3 libbam-dev_0.1.18-1 libbio-perl-perl_1.6.901-1 libblkid1_2.19.1-5 libbz2-1.0_1.0.5-7 libc-bin_2.13-21 libc-dev-bin_2.13-21 libc6_2.13-21 libc6-dev_2.13-21 libclass-isa-perl_0.36-2 libcomerr2_1.42~WIP-2011-11-20-1 libcroco3_0.6.2-2 libdata-stag-perl_0.11-2 libdb5.1_5.1.25-11 libdpkg-perl_1.16.1.1 libffi5_3.0.10-3 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-5 libgdbm3_1.8.3-10 libglib2.0-0_2.30.2-4 libgmp10_2:5.0.2+dfsg-2 libgomp1_4.6.2-5 libgpm2_1.20.4-4 libio-string-perl_1.08-2 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.09-2 libmount1_2.19.1-5 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libpam-modules_1.1.3-6 libpam-modules-bin_1.1.3-6 libpam-runtime_1.1.3-6 libpam0g_1.1.3-6 libpcre3_8.12-4 libpipeline1_1.2.0-5 libpng12-0_1.2.46-3 libpod-plainer-perl_1.03-1 libquadmath0_4.6.2-5 libreadline6_6.2-8 libselinux1_2.1.0-4 libsepol1_2.1.0-1.1 libslang2_2.2.4-3 libss2_1.42~WIP-2011-11-20-1 libstdc++6_4.6.2-5 libstdc++6-4.6-dev_4.6.2-5 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-19 libuuid1_2.19.1-5 libxml2_2.7.8.dfsg-5 linux-libc-dev_3.1.1-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-3 mawk_1.3.3-16 mount_2.19.1-5 multiarch-support_2.13-21 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.14.2-5 perl-base_5.14.2-5 perl-modules_5.14.2-5 po-debconf_1.0.16+nmu1 readline-common_6.2-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libbio-samtools-perl-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-13.13 sysvinit_2.88dsf-13.13 sysvinit-utils_2.88dsf-13.13 tar_1.26-3 tzdata_2011n-1 util-linux_2.19.1-5 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -289,48 +189,65 @@ Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binu
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Tue Nov 1 10:30:19 2011 UTC using RSA key ID 2295D502
-gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./libbio-samtools-perl_1.31-1.dsc
-dpkg-source: info: extracting libbio-samtools-perl in libbio-samtools-perl-1.31
-dpkg-source: info: unpacking libbio-samtools-perl_1.31.orig.tar.gz
-dpkg-source: info: unpacking libbio-samtools-perl_1.31-1.debian.tar.gz
+dpkg-source: warning: extracting unsigned source package (libbio-samtools-perl_1.32-1.dsc)
+dpkg-source: info: extracting libbio-samtools-perl in libbio-samtools-perl-1.32
+dpkg-source: info: unpacking libbio-samtools-perl_1.32.orig.tar.gz
+dpkg-source: info: unpacking libbio-samtools-perl_1.32-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
-Hack binNMU version
-───────────────────
+User Environment
+────────────────
-*** Created changelog entry for bin-NMU version 1.31-1+b1
+HOME=/sbuild-nonexistent
+LOGNAME=charles
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_CHROOT_NAME=sid-amd64-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1000
+SCHROOT_GROUP=charles
+SCHROOT_SESSION_ID=sid-amd64-sbuild-bd70c3c0-bc26-4798-ae04-226ba7ea3e00
+SCHROOT_UID=31051
+SCHROOT_USER=charles
+SHELL=/bin/sh
+TERM=xterm
+USER=charles
+USERNAME=charles
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package libbio-samtools-perl
-dpkg-buildpackage: source version 1.31-1+b1
- dpkg-source --before-build libbio-samtools-perl-1.31
+dpkg-buildpackage: source version 1.32-1
+dpkg-buildpackage: source changed by Charles Plessy <plessy at debian.org>
+ dpkg-source --before-build libbio-samtools-perl-1.32
dpkg-buildpackage: host architecture amd64
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
dh_clean
+ dpkg-source -b libbio-samtools-perl-1.32
+dpkg-source: info: using source format `3.0 (quilt)'
+dpkg-source: info: building libbio-samtools-perl using existing ./libbio-samtools-perl_1.32.orig.tar.gz
+dpkg-source: info: building libbio-samtools-perl in libbio-samtools-perl_1.32-1.debian.tar.gz
+dpkg-source: info: building libbio-samtools-perl in libbio-samtools-perl_1.32-1.dsc
debian/rules build
dh build
dh_testdir
debian/rules override_dh_auto_configure
-make[1]: Entering directory `/build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31'
+make[1]: Entering directory `/«PKGBUILDDIR»'
SAMTOOLS=/usr/include/samtools dh_auto_configure
Found /usr/include/samtools/bam.h and /usr/lib/libbam.a.
Created MYMETA.yml and MYMETA.json
-Creating new 'Build' script for 'Bio-SamTools' version '1.31'
-make[1]: Leaving directory `/build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31'
+Creating new 'Build' script for 'Bio-SamTools' version '1.32'
+make[1]: Leaving directory `/«PKGBUILDDIR»'
dh_auto_build
Building Bio-SamTools
-cc -I/usr/include/samtools -I/usr/lib/perl/5.14/CORE -DXS_VERSION="1.31" -DVERSION="1.31" -fPIC -D_IOLIB=2 -D_FILE_OFFSET_BITS=64 -Wformat=0 -c -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -g -o lib/Bio/DB/Sam.o lib/Bio/DB/Sam.c
+cc -I/usr/include/samtools -I/usr/lib/perl/5.14/CORE -DXS_VERSION="1.32" -DVERSION="1.32" -fPIC -D_IOLIB=2 -D_FILE_OFFSET_BITS=64 -Wformat=0 -c -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fno-strict-aliasing -pipe -fstack-protector -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -g -o lib/Bio/DB/Sam.o lib/Bio/DB/Sam.c
ExtUtils::Mkbootstrap::Mkbootstrap('blib/arch/auto/Bio/DB/Sam/Sam.bs')
cc -shared -O2 -g -L/usr/local/lib -fstack-protector -o blib/arch/auto/Bio/DB/Sam/Sam.so lib/Bio/DB/Sam.o -L/usr/lib -lbam -lz
dh_auto_test
@@ -338,133 +255,152 @@ cc -shared -O2 -g -L/usr/local/lib -fstack-protector -o blib/arch/auto/Bio/DB/Sa
[bam_parse_region] fail to determine the sequence name.
t/01sam.t .. ok
All tests successful.
-Files=1, Tests=112, 1 wallclock secs ( 0.04 usr 0.01 sys + 1.11 cusr 0.34 csys = 1.50 CPU)
+Files=1, Tests=112, 1 wallclock secs ( 0.03 usr 0.00 sys + 0.59 cusr 0.04 csys = 0.66 CPU)
Result: PASS
- fakeroot debian/rules binary-arch
-dh binary-arch
- dh_testroot -a
- dh_prep -a
- dh_installdirs -a
- dh_auto_install -a
+ fakeroot debian/rules binary
+dh binary
+ dh_testroot
+ dh_prep
+ dh_installdirs
+ dh_auto_install
Building Bio-SamTools
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/auto/Bio/DB/Sam/Sam.bs
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/auto/Bio/DB/Sam/Sam.so
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Sam.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/Pileup.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/AlignWrapper.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/PileupWrapper.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/Alignment.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/Target.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/ReadIterator.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/Query.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/FetchIterator.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Sam/Segment.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Sam/Constants.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Sam/SamToGBrowse.pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Sam::Constants.3pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Target.3pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::AlignWrapper.3pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Alignment.3pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Sam.3pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::PileupWrapper.3pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Pileup.3pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Query.3pm
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/bin/bamToGBrowse.pl
-Installing /build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2/libbio-samtools-perl-1.31/debian/libbio-samtools-perl/usr/bin/genomeCoverageBed.pl
- dh_install -a
- dh_installdocs -a
- dh_installchangelogs -a
- dh_installexamples -a
- dh_installman -a
- dh_installcatalogs -a
- dh_installcron -a
- dh_installdebconf -a
- dh_installemacsen -a
- dh_installifupdown -a
- dh_installinfo -a
- dh_installinit -a
- dh_installmenu -a
- dh_installmime -a
- dh_installmodules -a
- dh_installlogcheck -a
- dh_installlogrotate -a
- dh_installpam -a
- dh_installppp -a
- dh_installudev -a
- dh_installwm -a
- dh_installxfonts -a
- dh_installgsettings -a
- dh_bugfiles -a
- dh_ucf -a
- dh_lintian -a
- dh_gconf -a
- dh_icons -a
- dh_perl -a
- dh_usrlocal -a
- dh_link -a
- dh_compress -a
- dh_fixperms -a
- dh_strip -a
- dh_makeshlibs -a
- dh_shlibdeps -a
- dh_installdeb -a
- dh_gencontrol -a
- dh_md5sums -a
- dh_builddeb -a
-dpkg-deb: building package `libbio-samtools-perl' in `../libbio-samtools-perl_1.31-1+b1_amd64.deb'.
- dpkg-genchanges -B -mamd64 Build Daemon (brahms) <buildd_amd64-brahms at buildd.debian.org> >../libbio-samtools-perl_1.31-1+b1_amd64.changes
-dpkg-genchanges: arch-specific upload - not including arch-independent packages
-dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build libbio-samtools-perl-1.31
-dpkg-buildpackage: binary only upload (no source included)
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/auto/Bio/DB/Sam/Sam.bs
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/auto/Bio/DB/Sam/Sam.so
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Sam.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/Pileup.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/ReadIterator.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/PileupWrapper.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/Alignment.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/Target.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/AlignWrapper.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/FetchIterator.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Bam/Query.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Sam/Constants.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Sam/SamToGBrowse.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/lib/perl5/Bio/DB/Sam/Segment.pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Sam::Constants.3pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Alignment.3pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::PileupWrapper.3pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Sam.3pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::AlignWrapper.3pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Query.3pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Target.3pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/share/man/man3/Bio::DB::Bam::Pileup.3pm
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/bin/genomeCoverageBed.pl
+Installing /«PKGBUILDDIR»/debian/libbio-samtools-perl/usr/bin/bamToGBrowse.pl
+ dh_install
+ dh_installdocs
+ dh_installchangelogs
+ dh_installexamples
+ dh_installman
+ dh_installcatalogs
+ dh_installcron
+ dh_installdebconf
+ dh_installemacsen
+ dh_installifupdown
+ dh_installinfo
+ dh_installinit
+ dh_installmenu
+ dh_installmime
+ dh_installmodules
+ dh_installlogcheck
+ dh_installlogrotate
+ dh_installpam
+ dh_installppp
+ dh_installudev
+ dh_installwm
+ dh_installxfonts
+ dh_installgsettings
+ dh_bugfiles
+ dh_ucf
+ dh_lintian
+ dh_gconf
+ dh_icons
+ dh_perl
+ dh_usrlocal
+ dh_link
+ dh_compress
+ dh_fixperms
+ dh_strip
+ dh_makeshlibs
+ dh_shlibdeps
+ dh_installdeb
+ dh_gencontrol
+ dh_md5sums
+ dh_builddeb
+dpkg-deb: building package `libbio-samtools-perl' in `../libbio-samtools-perl_1.32-1_amd64.deb'.
+ dpkg-genchanges >../libbio-samtools-perl_1.32-1_amd64.changes
+dpkg-genchanges: including full source code in upload
+ dpkg-source --after-build libbio-samtools-perl-1.32
+dpkg-buildpackage: full upload (original source is included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20111115-0032
+Build finished at 20111123-1633
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+libbio-samtools-perl_1.32-1_amd64.changes:
+──────────────────────────────────────────
-libbio-samtools-perl_1.31-1+b1_amd64.changes:
Format: 1.8
-Date: Tue, 15 Nov 2011 00:32:20 +0000
-Source: libbio-samtools-perl (1.31-1)
+Date: Wed, 23 Nov 2011 16:26:32 +0900
+Source: libbio-samtools-perl
Binary: libbio-samtools-perl
-Architecture: amd64
-Version: 1.31-1+b1
-Distribution: sid
+Architecture: source amd64
+Version: 1.32-1
+Distribution: unstable
Urgency: low
-Maintainer: amd64 Build Daemon (brahms) <buildd_amd64-brahms at buildd.debian.org>
-Changed-By: amd64 Build Daemon (brahms) <buildd_amd64-brahms at buildd.debian.org>
+Maintainer: Debian Perl Group <pkg-perl-maintainers at lists.alioth.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
libbio-samtools-perl - read SAM/BAM nucleotide sequence aligment database files
Changes:
- libbio-samtools-perl (1.31-1+b1) sid; urgency=low
+ libbio-samtools-perl (1.32-1) unstable; urgency=low
.
- * Binary-only non-maintainer upload for amd64; no source changes.
- * Rebuild against perl 5.14
+ [36ac64b] New upstream release.
+ [dfb9312] Depend on BioPerl 1.6.901, following Upstream.
Checksums-Sha1:
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+ 0266eb438823a4a574270f99637f79a9e3556335 1282 libbio-samtools-perl_1.32-1.dsc
+ 0e5e1079ae4b2dda11bc8efac1532b7f77a12663 332281 libbio-samtools-perl_1.32.orig.tar.gz
+ ac6d745665cb500a0d42e48ddc1811fdd1a84901 7084 libbio-samtools-perl_1.32-1.debian.tar.gz
+ d4bb121221195004e586b9de7398d99d5fe9b4dd 208154 libbio-samtools-perl_1.32-1_amd64.deb
Checksums-Sha256:
- a336cd04972e811f1212706c9f054fcc70a983d9042f4af6c9fb076efba14643 208632 libbio-samtools-perl_1.31-1+b1_amd64.deb
+ 785ab4b18a63a4f8751069432458253feed0155bbb4c6908d13c933eff9c05bc 1282 libbio-samtools-perl_1.32-1.dsc
+ eba805d238daac4af796ba2273da4eb8692bf36fbd840093bd93efb5584ea299 332281 libbio-samtools-perl_1.32.orig.tar.gz
+ a58210827f8f5c4670928630e5b668045b0ea9eae7476471a2c593977d1f7fc3 7084 libbio-samtools-perl_1.32-1.debian.tar.gz
+ 44296d2eeb0e2db400ad50d6bda99287d567e3031e6681d35666f0df85d6e712 208154 libbio-samtools-perl_1.32-1_amd64.deb
Files:
- de60230252f1d95119cf09903fe82585 208632 perl optional libbio-samtools-perl_1.31-1+b1_amd64.deb
+ c03a26d0ca9581cd6e9abfd601ae7240 1282 perl optional libbio-samtools-perl_1.32-1.dsc
+ 566f8eb1a84856da3e524b32f3edfd47 332281 perl optional libbio-samtools-perl_1.32.orig.tar.gz
+ 4570cb3b9a7b65d1bdf83b2cf11d2870 7084 perl optional libbio-samtools-perl_1.32-1.debian.tar.gz
+ 1078d51844a57e10b03442e1b08b6c74 208154 perl optional libbio-samtools-perl_1.32-1_amd64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-libbio-samtools-perl_1.31-1+b1_amd64.deb
-────────────────────────────────────────
+libbio-samtools-perl_1.32-1_amd64.deb
+─────────────────────────────────────
new debian package, version 2.0.
- size 208632 bytes: control archive= 1639 bytes.
- 1042 bytes, 20 lines control
+ size 208154 bytes: control archive= 1621 bytes.
+ 1005 bytes, 19 lines control
2113 bytes, 28 lines md5sums
Package: libbio-samtools-perl
- Source: libbio-samtools-perl (1.31-1)
- Version: 1.31-1+b1
+ Version: 1.32-1
Architecture: amd64
Maintainer: Debian Perl Group <pkg-perl-maintainers at lists.alioth.debian.org>
- Installed-Size: 452
- Depends: perl (>= 5.14.2-3), perlapi-5.14.2, libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg), libbio-perl-perl (>= 1.6)
+ Installed-Size: 519
+ Depends: perl (>= 5.14.2-5), perlapi-5.14.2, libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg), libbio-perl-perl (>= 1.6.901)
Enhances: gbrowse, samtools
Section: perl
Priority: optional
@@ -479,66 +415,75 @@ libbio-samtools-perl_1.31-1+b1_amd64.deb
allowing BAM files to be used as a backend to the GBrowse genome browser
application.
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/bin/
--rwxr-xr-x root/root 2244 2011-11-15 00:32 ./usr/bin/bamToGBrowse.pl
--rwxr-xr-x root/root 368 2011-11-15 00:32 ./usr/bin/genomeCoverageBed.pl
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/lib/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/lib/perl5/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/lib/perl5/Bio/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Bam/
--rw-r--r-- root/root 2499 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Bam/Pileup.pm
--rw-r--r-- root/root 11125 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Bam/AlignWrapper.pm
--rw-r--r-- root/root 1993 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Bam/PileupWrapper.pm
--rw-r--r-- root/root 17097 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Bam/Alignment.pm
--rw-r--r-- root/root 1046 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Bam/Target.pm
--rw-r--r-- root/root 402 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Bam/ReadIterator.pm
--rw-r--r-- root/root 4596 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Bam/Query.pm
--rw-r--r-- root/root 335 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Bam/FetchIterator.pm
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Sam/
--rw-r--r-- root/root 2284 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Sam/Segment.pm
--rw-r--r-- root/root 2358 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Sam/Constants.pm
--rw-r--r-- root/root 11662 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Sam/SamToGBrowse.pm
--rw-r--r-- root/root 76043 2011-11-15 00:32 ./usr/lib/perl5/Bio/DB/Sam.pm
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/lib/perl5/auto/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/lib/perl5/auto/Bio/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/lib/perl5/auto/Bio/DB/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/lib/perl5/auto/Bio/DB/Sam/
--rw-r--r-- root/root 0 2011-11-15 00:32 ./usr/lib/perl5/auto/Bio/DB/Sam/Sam.bs
--rw-r--r-- root/root 260776 2011-11-15 00:32 ./usr/lib/perl5/auto/Bio/DB/Sam/Sam.so
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/share/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/share/man/man3/
--rw-r--r-- root/root 2409 2011-11-15 00:32 ./usr/share/man/man3/Bio::DB::Sam::Constants.3pm.gz
--rw-r--r-- root/root 1887 2011-11-15 00:32 ./usr/share/man/man3/Bio::DB::Bam::Target.3pm.gz
--rw-r--r-- root/root 2491 2011-11-15 00:32 ./usr/share/man/man3/Bio::DB::Bam::AlignWrapper.3pm.gz
--rw-r--r-- root/root 7438 2011-11-15 00:32 ./usr/share/man/man3/Bio::DB::Bam::Alignment.3pm.gz
--rw-r--r-- root/root 20515 2011-11-15 00:32 ./usr/share/man/man3/Bio::DB::Sam.3pm.gz
--rw-r--r-- root/root 2248 2011-11-15 00:32 ./usr/share/man/man3/Bio::DB::Bam::PileupWrapper.3pm.gz
--rw-r--r-- root/root 2908 2011-11-15 00:32 ./usr/share/man/man3/Bio::DB::Bam::Pileup.3pm.gz
--rw-r--r-- root/root 2916 2011-11-15 00:32 ./usr/share/man/man3/Bio::DB::Bam::Query.3pm.gz
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-11-15 00:32 ./usr/share/doc/libbio-samtools-perl/
--rw-r--r-- root/root 242 2011-06-28 04:36 ./usr/share/doc/libbio-samtools-perl/README.Debian
--rw-r--r-- root/root 10785 2011-11-01 10:15 ./usr/share/doc/libbio-samtools-perl/copyright
--rw-r--r-- root/root 1889 2011-11-15 00:32 ./usr/share/doc/libbio-samtools-perl/changelog.Debian.gz
--rw-r--r-- root/root 2781 2011-09-22 13:27 ./usr/share/doc/libbio-samtools-perl/changelog.gz
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/lib/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/lib/perl5/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/lib/perl5/auto/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/lib/perl5/auto/Bio/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/lib/perl5/auto/Bio/DB/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/lib/perl5/auto/Bio/DB/Sam/
+-rw-r--r-- root/root 0 2011-11-23 16:33 ./usr/lib/perl5/auto/Bio/DB/Sam/Sam.bs
+-rw-r--r-- root/root 260776 2011-11-23 16:33 ./usr/lib/perl5/auto/Bio/DB/Sam/Sam.so
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/lib/perl5/Bio/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Bam/
+-rw-r--r-- root/root 2453 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Bam/Pileup.pm
+-rw-r--r-- root/root 402 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Bam/ReadIterator.pm
+-rw-r--r-- root/root 1940 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Bam/PileupWrapper.pm
+-rw-r--r-- root/root 17048 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Bam/Alignment.pm
+-rw-r--r-- root/root 1046 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Bam/Target.pm
+-rw-r--r-- root/root 11084 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Bam/AlignWrapper.pm
+-rw-r--r-- root/root 335 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Bam/FetchIterator.pm
+-rw-r--r-- root/root 4551 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Bam/Query.pm
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Sam/
+-rw-r--r-- root/root 2309 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Sam/Constants.pm
+-rw-r--r-- root/root 11662 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Sam/SamToGBrowse.pm
+-rw-r--r-- root/root 2284 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Sam/Segment.pm
+-rw-r--r-- root/root 76399 2011-11-23 16:33 ./usr/lib/perl5/Bio/DB/Sam.pm
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/bin/
+-rwxr-xr-x root/root 368 2011-11-23 16:33 ./usr/bin/genomeCoverageBed.pl
+-rwxr-xr-x root/root 2244 2011-11-23 16:33 ./usr/bin/bamToGBrowse.pl
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/share/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/share/man/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/share/man/man3/
+-rw-r--r-- root/root 20515 2011-11-23 16:33 ./usr/share/man/man3/Bio::DB::Sam.3pm.gz
+-rw-r--r-- root/root 7438 2011-11-23 16:33 ./usr/share/man/man3/Bio::DB::Bam::Alignment.3pm.gz
+-rw-r--r-- root/root 2249 2011-11-23 16:33 ./usr/share/man/man3/Bio::DB::Bam::PileupWrapper.3pm.gz
+-rw-r--r-- root/root 2491 2011-11-23 16:33 ./usr/share/man/man3/Bio::DB::Bam::AlignWrapper.3pm.gz
+-rw-r--r-- root/root 1887 2011-11-23 16:33 ./usr/share/man/man3/Bio::DB::Bam::Target.3pm.gz
+-rw-r--r-- root/root 2909 2011-11-23 16:33 ./usr/share/man/man3/Bio::DB::Bam::Pileup.3pm.gz
+-rw-r--r-- root/root 2410 2011-11-23 16:33 ./usr/share/man/man3/Bio::DB::Sam::Constants.3pm.gz
+-rw-r--r-- root/root 2917 2011-11-23 16:33 ./usr/share/man/man3/Bio::DB::Bam::Query.3pm.gz
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/share/doc/
+drwxr-xr-x root/root 0 2011-11-23 16:33 ./usr/share/doc/libbio-samtools-perl/
+-rw-r--r-- root/root 2899 2011-11-09 07:21 ./usr/share/doc/libbio-samtools-perl/changelog.gz
+-rw-r--r-- root/root 10785 2011-11-23 16:23 ./usr/share/doc/libbio-samtools-perl/copyright
+-rw-r--r-- root/root 1842 2011-11-23 16:26 ./usr/share/doc/libbio-samtools-perl/changelog.Debian.gz
+-rw-r--r-- root/root 242 2011-11-23 16:00 ./usr/share/doc/libbio-samtools-perl/README.Debian
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
+
+lintian
+───────
+
+P: libbio-samtools-perl source: unversioned-copyright-format-uri http://dep.debian.net/deps/dep5/
+W: libbio-samtools-perl: script-with-language-extension usr/bin/bamToGBrowse.pl
+W: libbio-samtools-perl: script-with-language-extension usr/bin/genomeCoverageBed.pl
+W: libbio-samtools-perl: binary-without-manpage usr/bin/bamToGBrowse.pl
+W: libbio-samtools-perl: binary-without-manpage usr/bin/genomeCoverageBed.pl
+
+I: Lintian run was successful.
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-amd64-sbuild-3823bab3-b6fb-408e-b1f2-bcbafbb0aad6/build/buildd-libbio-samtools-perl_1.31-1+b1-amd64-5iedw2
+Purging /«BUILDDIR»
Reading package lists...
Building dependency tree...
Reading state information...
@@ -547,23 +492,23 @@ Reading package lists...
Building dependency tree...
Reading state information...
The following packages will be REMOVED:
- bsdmainutils* debhelper* file* gettext* gettext-base* groff-base* html2text*
+ debhelper* file* gettext* gettext-base* groff-base* html2text*
intltool-debian* libbam-dev* libbio-perl-perl* libcroco3* libdata-stag-perl*
- libglib2.0-0* libio-string-perl* libmagic1* libpcre3* libpipeline1*
- libunistring0* libxml2* man-db* po-debconf* zlib1g-dev*
-0 upgraded, 0 newly installed, 22 to remove and 0 not upgraded.
-After this operation, 46.8 MB disk space will be freed.
-(Reading database ... 14124 files and directories currently installed.)
+ libffi5* libglib2.0-0* libio-string-perl* libmagic1* libpcre3* libpipeline1*
+ libunistring0* libxml2* man-db* po-debconf*
+ sbuild-build-depends-libbio-samtools-perl-dummy* zlib1g-dev*
+0 upgraded, 0 newly installed, 23 to remove and 0 not upgraded.
+After this operation, 46.4 MB disk space will be freed.
+(Reading database ... 14112 files and directories currently installed.)
+Removing sbuild-build-depends-libbio-samtools-perl-dummy ...
Removing debhelper ...
-Removing man-db ...
-Purging configuration files for man-db ...
-Removing bsdmainutils ...
-Purging configuration files for bsdmainutils ...
Removing file ...
Removing po-debconf ...
Removing intltool-debian ...
Removing gettext ...
Removing gettext-base ...
+Removing man-db ...
+Purging configuration files for man-db ...
Removing groff-base ...
Purging configuration files for groff-base ...
Removing html2text ...
@@ -575,6 +520,8 @@ Purging configuration files for libcroco3 ...
Removing libdata-stag-perl ...
Removing libglib2.0-0 ...
Purging configuration files for libglib2.0-0 ...
+Removing libffi5 ...
+Purging configuration files for libffi5 ...
Removing libio-string-perl ...
Removing libmagic1 ...
Purging configuration files for libmagic1 ...
@@ -593,18 +540,18 @@ Removing zlib1g-dev ...
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: amd64
-Build-Space: 2628
-Build-Time: 20
-Distribution: sid
-Install-Time: 43
-Job: libbio-samtools-perl_1.31-1
+Build-Space: 3116
+Build-Time: 6
+Distribution: unstable
+Install-Time: 29
+Job: libbio-samtools-perl_1.32-1.dsc
+Lintian: pass
Package: libbio-samtools-perl
-Package-Time: 70
-Source-Version: 1.31-1
-Space: 2628
+Package-Time: 39
+Source-Version: 1.32-1
+Space: 3116
Status: successful
-Version: 1.31-1+b1
+Version: 1.32-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20111115-0032
-Build needed 00:01:10, 2628k disc space
-Signature with key '037769A2' requested:
+Finished at 20111123-1633
+Build needed 00:00:39, 3116k disc space
diff --git a/dsc b/dsc
index 8a98e21..3075dd6 100644
--- a/dsc
+++ b/dsc
@@ -5,40 +5,40 @@ Format: 3.0 (quilt)
Source: libbio-samtools-perl
Binary: libbio-samtools-perl
Architecture: any
-Version: 1.31-1
+Version: 1.32-1
Maintainer: Debian Perl Group <pkg-perl-maintainers at lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy at debian.org>
Homepage: http://search.cpan.org/dist/Bio-SamTools/
Standards-Version: 3.9.2
Vcs-Browser: http://git.debian.org/?p=pkg-perl/packages/libbio-samtools-perl.git
Vcs-Git: git://git.debian.org/git/pkg-perl/packages/libbio-samtools-perl.git
-Build-Depends: debhelper (>= 8), libmodule-build-perl, perl-modules, perl (>= 5.8), zlib1g-dev, libbam-dev (>= 0.1.16-1~), libbio-perl-perl (>= 1.6)
+Build-Depends: debhelper (>= 8), libmodule-build-perl, perl-modules, perl (>= 5.8), zlib1g-dev, libbam-dev (>= 0.1.16-1~), libbio-perl-perl (>= 1.6.901)
Package-List:
libbio-samtools-perl deb perl optional
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- 2ef89307cf90e9a780c67964a942fd279b451423 7012 libbio-samtools-perl_1.31-1.debian.tar.gz
+ 0e5e1079ae4b2dda11bc8efac1532b7f77a12663 332281 libbio-samtools-perl_1.32.orig.tar.gz
+ ac6d745665cb500a0d42e48ddc1811fdd1a84901 7084 libbio-samtools-perl_1.32-1.debian.tar.gz
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- 88796e1fa53bcc9814e20222770f9c6696f27917b4c0f5ebee455da8212c19dd 7012 libbio-samtools-perl_1.31-1.debian.tar.gz
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- d19ccb747abcb1a3a078b769412f6bbb 332207 libbio-samtools-perl_1.31.orig.tar.gz
- fe3b24c925489ad0c2e23f9e937561cc 7012 libbio-samtools-perl_1.31-1.debian.tar.gz
+ 566f8eb1a84856da3e524b32f3edfd47 332281 libbio-samtools-perl_1.32.orig.tar.gz
+ 4570cb3b9a7b65d1bdf83b2cf11d2870 7084 libbio-samtools-perl_1.32-1.debian.tar.gz
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--
read SAM/BAM nucleotide sequence aligment database files
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